Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:36:46 (903353): wrapper (7.7.26015): starting
12:36:46 (903353): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 12:36:46] Arguments: --nthreads 4
[2025-06-04 12:36:46] Threads: 4
[2025-06-04 12:36:46] Checking for CVMFS
[2025-06-04 12:36:46] No cvmfs_config command found, will try listing directly
[2025-06-04 12:36:46] CVMFS is ok
[2025-06-04 12:36:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 12:36:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 12:36:46] Further information can be found at the LHC@home message board.
[2025-06-04 12:36:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 12:36:46] Checking for apptainer binary...
[2025-06-04 12:36:46] which: no apptainer in ((null))
[2025-06-04 12:36:46] apptainer is not installed, using version from CVMFS
[2025-06-04 12:36:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 12:36:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-06-04 12:36:47] apptainer works
[2025-06-04 12:36:47] Set ATHENA_PROC_NUMBER=4
[2025-06-04 12:36:47] Set ATHENA_CORE_NUMBER=4
[2025-06-04 12:36:47] Starting ATLAS job with PandaID=6677394088
[2025-06-04 12:36:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 15:40:46]  *** The last 200 lines of the pilot log: ***
[2025-06-04 15:40:46] 2025-06-04 13:40:03,275 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 15:40:46] 2025-06-04 13:40:03,787 | WARNING  | process 913738 can no longer be monitored (due to stat problems) - aborting
[2025-06-04 15:40:46] 2025-06-04 13:40:03,788 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677394088/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:40:46] 2025-06-04 13:40:04,169 | INFO     | number of running child processes to parent process 913738: 1
[2025-06-04 15:40:46] 2025-06-04 13:40:04,169 | INFO     | maximum number of monitored processes: 6
[2025-06-04 15:40:46] 2025-06-04 13:40:06,672 | INFO     | monitor loop #796: job 0:6677394088 is in state 'finished'
[2025-06-04 15:40:46] 2025-06-04 13:40:06,673 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,388 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 15:40:46] 2025-06-04 13:40:07,389 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6677394088/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,390 | INFO     | extracted standard info from prmon json
[2025-06-04 15:40:46] 2025-06-04 13:40:07,390 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 15:40:46] 2025-06-04 13:40:07,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 15:40:46] 2025-06-04 13:40:07,390 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 15:40:46] 2025-06-04 13:40:07,390 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 15:40:46] 2025-06-04 13:40:07,395 | INFO     | fitting pss+swap vs Time
[2025-06-04 15:40:46] 2025-06-04 13:40:07,395 | INFO     | sum of square deviations: 1808350185.0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,397 | INFO     | sum of deviations: -8474851572.999996
[2025-06-04 15:40:46] 2025-06-04 13:40:07,397 | INFO     | mean x: 1749038903.5
[2025-06-04 15:40:46] 2025-06-04 13:40:07,397 | INFO     | mean y: 2356922.6555555556
[2025-06-04 15:40:46] 2025-06-04 13:40:07,397 | INFO     | -- intersect: 8199245570.39563
[2025-06-04 15:40:46] 2025-06-04 13:40:07,397 | INFO     | intersect: 8199245570.39563
[2025-06-04 15:40:46] 2025-06-04 13:40:07,398 | INFO     | chi2: 1.7168505220517059
[2025-06-04 15:40:46] 2025-06-04 13:40:07,398 | INFO     | sum of square deviations: 1661798600.0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,399 | INFO     | sum of deviations: -7962393806.000004
[2025-06-04 15:40:46] 2025-06-04 13:40:07,400 | INFO     | mean x: 1749038751.0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,400 | INFO     | mean y: 2357456.5142857144
[2025-06-04 15:40:46] 2025-06-04 13:40:07,400 | INFO     | -- intersect: 8382756451.564819
[2025-06-04 15:40:46] 2025-06-04 13:40:07,400 | INFO     | intersect: 8382756451.564819
[2025-06-04 15:40:46] 2025-06-04 13:40:07,400 | INFO     | chi2: 1.7162929571815426
[2025-06-04 15:40:46] 2025-06-04 13:40:07,401 | INFO     | current chi2=1.7162929571815426 (change=0.032476028809830054 %)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,401 | INFO     | right removable region: 174
[2025-06-04 15:40:46] 2025-06-04 13:40:07,401 | INFO     | sum of square deviations: 1661798600.0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,402 | INFO     | sum of deviations: -34599445708.0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,403 | INFO     | mean x: 1749039056.0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,403 | INFO     | mean y: 2383763.4742857143
[2025-06-04 15:40:46] 2025-06-04 13:40:07,403 | INFO     | -- intersect: 36418217703.4256
[2025-06-04 15:40:46] 2025-06-04 13:40:07,403 | INFO     | intersect: 36418217703.4256
[2025-06-04 15:40:46] 2025-06-04 13:40:07,403 | INFO     | chi2: 0.1985965488113429
[2025-06-04 15:40:46] 2025-06-04 13:40:07,404 | INFO     | current chi2=0.1985965488113429 (change=88.43250788228133 %)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,404 | INFO     | sum of square deviations: 1523386702.5
[2025-06-04 15:40:46] 2025-06-04 13:40:07,405 | INFO     | sum of deviations: -27892151484.999992
[2025-06-04 15:40:46] 2025-06-04 13:40:07,405 | INFO     | mean x: 1749039208.5
[2025-06-04 15:40:46] 2025-06-04 13:40:07,406 | INFO     | mean y: 2376342.0470588235
[2025-06-04 15:40:46] 2025-06-04 13:40:07,406 | INFO     | -- intersect: 32026068341.34524
[2025-06-04 15:40:46] 2025-06-04 13:40:07,406 | INFO     | intersect: 32026068341.34524
[2025-06-04 15:40:46] 2025-06-04 13:40:07,406 | INFO     | chi2: 0.17649994230725957
[2025-06-04 15:40:46] 2025-06-04 13:40:07,407 | INFO     | current chi2=0.17649994230725957 (change=11.126379907575346 %)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,407 | INFO     | left removable region: 20
[2025-06-04 15:40:46] 2025-06-04 13:40:07,407 | INFO     | sum of square deviations: 1132458442.5
[2025-06-04 15:40:46] 2025-06-04 13:40:07,408 | INFO     | sum of deviations: -10810692304.0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,408 | INFO     | mean x: 1749039330.5
[2025-06-04 15:40:46] 2025-06-04 13:40:07,408 | INFO     | mean y: 2357137.7792207794
[2025-06-04 15:40:46] 2025-06-04 13:40:07,409 | INFO     | -- intersect: 16699063453.896124
[2025-06-04 15:40:46] 2025-06-04 13:40:07,409 | INFO     | intersect: 16699063453.896124
[2025-06-04 15:40:46] 2025-06-04 13:40:07,409 | INFO     | chi2: 0.060634423225413375
[2025-06-04 15:40:46] 2025-06-04 13:40:07,409 | INFO     | -- intersect: 16699063453.896124
[2025-06-04 15:40:46] 2025-06-04 13:40:07,409 | INFO     | current memory leak: -9.55 B/s (using 154 data points, chi2=0.06)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,410 | INFO     | ..............................
[2025-06-04 15:40:46] 2025-06-04 13:40:07,410 | INFO     | . Timing measurements:
[2025-06-04 15:40:46] 2025-06-04 13:40:07,410 | INFO     | . get job = 0 s
[2025-06-04 15:40:46] 2025-06-04 13:40:07,411 | INFO     | . initial setup = 1 s
[2025-06-04 15:40:46] 2025-06-04 13:40:07,411 | INFO     | . payload setup = 6 s
[2025-06-04 15:40:46] 2025-06-04 13:40:07,411 | INFO     | . stage-in = 0 s
[2025-06-04 15:40:46] 2025-06-04 13:40:07,411 | INFO     | . payload execution = 10956 s
[2025-06-04 15:40:46] 2025-06-04 13:40:07,411 | INFO     | . stage-out = 1 s
[2025-06-04 15:40:46] 2025-06-04 13:40:07,411 | INFO     | . log creation = 0 s
[2025-06-04 15:40:46] 2025-06-04 13:40:07,411 | INFO     | ..............................
[2025-06-04 15:40:46] 2025-06-04 13:40:07,634 | INFO     | 
[2025-06-04 15:40:46] 2025-06-04 13:40:07,635 | INFO     | job summary report
[2025-06-04 15:40:46] 2025-06-04 13:40:07,635 | INFO     | --------------------------------------------------
[2025-06-04 15:40:46] 2025-06-04 13:40:07,635 | INFO     | PanDA job id: 6677394088
[2025-06-04 15:40:46] 2025-06-04 13:40:07,635 | INFO     | task id: 45006595
[2025-06-04 15:40:46] 2025-06-04 13:40:07,635 | INFO     | errors: (none)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,635 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 15:40:46] 2025-06-04 13:40:07,636 | INFO     | pilot state: finished 
[2025-06-04 15:40:46] 2025-06-04 13:40:07,636 | INFO     | transexitcode: 0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,636 | INFO     | exeerrorcode: 0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,636 | INFO     | exeerrordiag: 
[2025-06-04 15:40:46] 2025-06-04 13:40:07,636 | INFO     | exitcode: 0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,636 | INFO     | exitmsg: OK
[2025-06-04 15:40:46] 2025-06-04 13:40:07,636 | INFO     | cpuconsumptiontime: 41918 s
[2025-06-04 15:40:46] 2025-06-04 13:40:07,636 | INFO     | nevents: 400
[2025-06-04 15:40:46] 2025-06-04 13:40:07,637 | INFO     | neventsw: 0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,637 | INFO     | pid: 913738
[2025-06-04 15:40:46] 2025-06-04 13:40:07,637 | INFO     | pgrp: 913738
[2025-06-04 15:40:46] 2025-06-04 13:40:07,637 | INFO     | corecount: 4
[2025-06-04 15:40:46] 2025-06-04 13:40:07,637 | INFO     | event service: False
[2025-06-04 15:40:46] 2025-06-04 13:40:07,637 | INFO     | sizes: {0: 2405017, 1: 2405216, 5: 2405422, 12: 2405478, 10967: 2434229, 10969: 2444245, 10971: 2444429, 10975: 2444599}
[2025-06-04 15:40:46] 2025-06-04 13:40:07,637 | INFO     | --------------------------------------------------
[2025-06-04 15:40:46] 2025-06-04 13:40:07,637 | INFO     | 
[2025-06-04 15:40:46] 2025-06-04 13:40:07,638 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-06-04 15:40:46] 2025-06-04 13:40:07,658 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,659 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,659 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,659 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,659 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,659 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,660 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,660 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,660 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,660 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,660 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,660 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,661 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,661 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,661 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,661 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,661 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,661 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,661 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,662 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 15:40:46] 2025-06-04 13:40:07,662 | INFO     | job 6677394088 has completed (purged errors)
[2025-06-04 15:40:46] 2025-06-04 13:40:07,662 | INFO     | overall cleanup function is called
[2025-06-04 15:40:46] 2025-06-04 13:40:08,670 | INFO     | --- collectZombieJob: --- 10, [913738]
[2025-06-04 15:40:46] 2025-06-04 13:40:08,670 | INFO     | zombie collector waiting for pid 913738
[2025-06-04 15:40:46] 2025-06-04 13:40:08,671 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 15:40:46] 2025-06-04 13:40:08,671 | INFO     | collected zombie processes
[2025-06-04 15:40:46] 2025-06-04 13:40:08,671 | INFO     | will attempt to kill all subprocesses of pid=913738
[2025-06-04 15:40:46] 2025-06-04 13:40:09,055 | INFO     | process IDs to be killed: [913738] (in reverse order)
[2025-06-04 15:40:46] 2025-06-04 13:40:09,151 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 15:40:46] 2025-06-04 13:40:09,151 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 15:40:46] 2025-06-04 13:40:09,162 | INFO     | did not find any defunct processes belonging to 913738
[2025-06-04 15:40:46] 2025-06-04 13:40:09,172 | INFO     | did not find any defunct processes belonging to 913738
[2025-06-04 15:40:46] 2025-06-04 13:40:09,172 | INFO     | ready for new job
[2025-06-04 15:40:46] 2025-06-04 13:40:09,173 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 15:40:46] 2025-06-04 13:40:09,175 | INFO     | **************************************
[2025-06-04 15:40:46] 2025-06-04 13:40:09,175 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 15:40:46] 2025-06-04 13:40:09,175 | INFO     | **************************************
[2025-06-04 15:40:46] 2025-06-04 13:40:09,175 | INFO     | 
[2025-06-04 15:40:46] 2025-06-04 13:40:09,178 | INFO     | architecture information:
[2025-06-04 15:40:46] 2025-06-04 13:40:09,178 | INFO     | executing command: cat /etc/os-release
[2025-06-04 15:40:46] 2025-06-04 13:40:09,194 | INFO     | cat /etc/os-release:
[2025-06-04 15:40:46] NAME="CentOS Linux"
[2025-06-04 15:40:46] VERSION="7 (Core)"
[2025-06-04 15:40:46] ID="centos"
[2025-06-04 15:40:46] ID_LIKE="rhel fedora"
[2025-06-04 15:40:46] VERSION_ID="7"
[2025-06-04 15:40:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 15:40:46] ANSI_COLOR="0;31"
[2025-06-04 15:40:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 15:40:46] HOME_URL="https://www.centos.org/"
[2025-06-04 15:40:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 15:40:46] 
[2025-06-04 15:40:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 15:40:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 15:40:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 15:40:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 15:40:46] 
[2025-06-04 15:40:46] 2025-06-04 13:40:09,195 | INFO     | **************************************
[2025-06-04 15:40:46] 2025-06-04 13:40:09,697 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-06-04 15:40:46] 2025-06-04 13:40:09,711 | INFO     | sufficient remaining disk space (1648010199040 B)
[2025-06-04 15:40:46] 2025-06-04 13:40:09,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 15:40:46] 2025-06-04 13:40:09,712 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 15:40:46] 2025-06-04 13:40:09,712 | INFO     | update_server=False
[2025-06-04 15:40:46] 2025-06-04 13:40:09,712 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 15:40:46] 2025-06-04 13:40:09,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 15:40:46] 2025-06-04 13:40:09,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 15:40:46] 2025-06-04 13:40:09,850 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 15:40:46] 2025-06-04 13:40:09,851 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 15:40:46] 2025-06-04 13:40:09,851 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 15:40:46] 2025-06-04 13:40:10,129 | INFO     | all data control threads have been joined
[2025-06-04 15:40:46] 2025-06-04 13:40:10,182 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:40:46] 2025-06-04 13:40:10,182 | INFO     | aborting loop
[2025-06-04 15:40:46] 2025-06-04 13:40:10,717 | INFO     | [job] retrieve thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:10,747 | INFO     | [data] copytool_in thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:10,794 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:10,864 | INFO     | all job control threads have been joined
[2025-06-04 15:40:46] 2025-06-04 13:40:11,069 | INFO     | all payload control threads have been joined
[2025-06-04 15:40:46] 2025-06-04 13:40:11,121 | INFO     | [payload] validate_post thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:11,134 | INFO     | [data] control thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:11,188 | INFO     | [job] job monitor thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:11,386 | INFO     | [payload] failed_post thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:11,712 | INFO     | [job] validate thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:11,717 | INFO     | [data] copytool_out thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:11,830 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:11,869 | INFO     | [job] control thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:12,074 | INFO     | [payload] control thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:12,094 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:12,537 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 15:40:46] 2025-06-04 13:40:13,543 | INFO     | [job] queue monitor thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:13,718 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:20,351 | INFO     | job.realtimelogging is not enabled
[2025-06-04 15:40:46] 2025-06-04 13:40:21,356 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 15:40:46] 2025-06-04 13:40:21,619 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23398642251584)>', '<ExcThread(monitor, started 23398402979584)>']
[2025-06-04 15:40:46] 2025-06-04 13:40:21,910 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 15:40:46] 2025-06-04 13:40:21,910 | INFO     | [monitor] control thread has ended
[2025-06-04 15:40:46] 2025-06-04 13:40:26,645 | INFO     | all workflow threads have been joined
[2025-06-04 15:40:46] 2025-06-04 13:40:26,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 15:40:46] 2025-06-04 13:40:26,645 | INFO     | traces error code: 0
[2025-06-04 15:40:46] 2025-06-04 13:40:26,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 15:40:46] 2025-06-04 13:40:26,789 [wrapper] ==== pilot stdout END ====
[2025-06-04 15:40:46] 2025-06-04 13:40:26,791 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 15:40:46] 2025-06-04 13:40:26,793 [wrapper] pilotpid: 906935
[2025-06-04 15:40:46] 2025-06-04 13:40:26,795 [wrapper] Pilot exit status: 0
[2025-06-04 15:40:46] 2025-06-04 13:40:26,804 [wrapper] pandaids: 6677394088
[2025-06-04 15:40:46] 2025-06-04 13:40:26,848 [wrapper] cleanup supervisor_pilot 1097618 906936
[2025-06-04 15:40:46] 2025-06-04 13:40:26,851 [wrapper] Test setup, not cleaning
[2025-06-04 15:40:46] 2025-06-04 13:40:26,853 [wrapper] apfmon messages muted
[2025-06-04 15:40:46] 2025-06-04 13:40:26,856 [wrapper] ==== wrapper stdout END ====
[2025-06-04 15:40:46] 2025-06-04 13:40:26,858 [wrapper] ==== wrapper stderr END ====
[2025-06-04 15:40:46]  *** Error codes and diagnostics ***
[2025-06-04 15:40:46]     "exeErrorCode": 0,
[2025-06-04 15:40:46]     "exeErrorDiag": "",
[2025-06-04 15:40:46]     "pilotErrorCode": 0,
[2025-06-04 15:40:46]     "pilotErrorDiag": "",
[2025-06-04 15:40:46]  *** Listing of results directory ***
[2025-06-04 15:40:46] total 390208
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc    495897 Jun  2 21:02 pilot3.tar.gz
[2025-06-04 15:40:46] -rwx------ 1 boinc boinc     37140 Jun  2 21:14 runpilot2-wrapper.sh
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc      5111 Jun  2 21:14 queuedata.json
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc       100 Jun  4 12:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 15:40:46] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 12:36 run_atlas
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc       105 Jun  4 12:36 job.xml
[2025-06-04 15:40:46] -rw-r--r-- 2 boinc boinc 216526499 Jun  4 12:36 EVNT.45006593._000361.pool.root.1
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc      6422 Jun  4 12:36 init_data.xml
[2025-06-04 15:40:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:36 start_atlas.sh
[2025-06-04 15:40:46] drwxrwx--x 2 boinc boinc      4096 Jun  4 12:36 shared
[2025-06-04 15:40:46] -rw-r--r-- 2 boinc boinc    508867 Jun  4 12:36 input.tar.gz
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc         0 Jun  4 12:36 boinc_lockfile
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc      2521 Jun  4 12:36 pandaJob.out
[2025-06-04 15:40:46] -rw------- 1 boinc boinc    986812 Jun  4 12:36 agis_schedconf.cvmfs.json
[2025-06-04 15:40:46] drwx------ 4 boinc boinc      4096 Jun  4 12:36 pilot3
[2025-06-04 15:40:46] -rw------- 1 boinc boinc 176557717 Jun  4 15:39 HITS.45006595._009016.pool.root.1
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc       528 Jun  4 15:39 boinc_task_state.xml
[2025-06-04 15:40:46] -rw------- 1 boinc boinc        95 Jun  4 15:39 pilot_heartbeat.json
[2025-06-04 15:40:46] -rw------- 1 boinc boinc      1034 Jun  4 15:39 memory_monitor_summary.json
[2025-06-04 15:40:46] -rw------- 1 boinc boinc   1598969 Jun  4 15:40 agis_ddmendpoints.agis.ALL.json
[2025-06-04 15:40:46] -rw------- 1 boinc boinc    305686 Jun  4 15:40 log.45006595._009016.job.log.tgz.1
[2025-06-04 15:40:46] -rw------- 1 boinc boinc      7726 Jun  4 15:40 heartbeat.json
[2025-06-04 15:40:46] -rw------- 1 boinc boinc      4436 Jun  4 15:40 pilotlog.txt
[2025-06-04 15:40:46] -rw------- 1 boinc boinc   1027795 Jun  4 15:40 log.45006595._009016.job.log.1
[2025-06-04 15:40:46] -rw------- 1 boinc boinc       357 Jun  4 15:40 output.list
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc       620 Jun  4 15:40 runtime_log
[2025-06-04 15:40:46] -rw------- 1 boinc boinc   1351680 Jun  4 15:40 result.tar.gz
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc      9026 Jun  4 15:40 runtime_log.err
[2025-06-04 15:40:46] -rw------- 1 boinc boinc       665 Jun  4 15:40 JhlKDmymPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfEgKDmIxIKXo.diag
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc        26 Jun  4 15:40 wrapper_checkpoint.txt
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc      8192 Jun  4 15:40 boinc_mmap_file
[2025-06-04 15:40:46] -rw-r--r-- 1 boinc boinc     20955 Jun  4 15:40 stderr.txt
[2025-06-04 15:40:46] HITS file was successfully produced:
[2025-06-04 15:40:46] -rw------- 1 boinc boinc 176557717 Jun  4 15:39 shared/HITS.pool.root.1
[2025-06-04 15:40:46]  *** Contents of shared directory: ***
[2025-06-04 15:40:46] total 385712
[2025-06-04 15:40:46] -rw-r--r-- 2 boinc boinc 216526499 Jun  4 12:36 ATLAS.root_0
[2025-06-04 15:40:46] -rw-r--r-- 2 boinc boinc     15093 Jun  4 12:36 start_atlas.sh
[2025-06-04 15:40:46] -rw-r--r-- 2 boinc boinc    508867 Jun  4 12:36 input.tar.gz
[2025-06-04 15:40:46] -rw------- 1 boinc boinc 176557717 Jun  4 15:39 HITS.pool.root.1
[2025-06-04 15:40:46] -rw------- 1 boinc boinc   1351680 Jun  4 15:40 result.tar.gz
15:40:48 (903353): run_atlas exited; CPU time 42391.085092
15:40:48 (903353): called boinc_finish(0)

</stderr_txt>
]]>

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