Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:51:31 (25756): wrapper (7.7.26015): starting
06:51:31 (25756): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:51:31] Arguments: --nthreads 8
[2025-06-03 06:51:31] Threads: 8
[2025-06-03 06:51:31] Checking for CVMFS
[2025-06-03 06:51:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:51:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:51:33] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:51:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:51:34] 2.11.2.0 361 31336 91800 146729 0 155 14212665 25165824 4632 130560 0 15287903 99.809 18293374 2340 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 06:51:34] CVMFS is ok
[2025-06-03 06:51:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:51:34] Checking for apptainer binary...
[2025-06-03 06:51:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:51:34] Running /usr/bin/apptainer --version
[2025-06-03 06:51:34] apptainer version 1.3.2-1.el7
[2025-06-03 06:51:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:51:40] cg-vwn321.simple-grid.lan
[2025-06-03 06:51:40] apptainer works
[2025-06-03 06:51:40] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:51:40] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:51:40] Starting ATLAS job with PandaID=6677382074
[2025-06-03 06:51:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:47:50]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:47:50] 2025-06-03 08:47:33,417 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6677382074/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,418 | INFO     | extracted standard info from prmon json
[2025-06-03 10:47:50] 2025-06-03 08:47:33,418 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:47:50] 2025-06-03 08:47:33,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:47:50] 2025-06-03 08:47:33,418 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:47:50] 2025-06-03 08:47:33,418 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:47:50] 2025-06-03 08:47:33,424 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:47:50] 2025-06-03 08:47:33,424 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,426 | INFO     | sum of deviations: 29667298272.000004
[2025-06-03 10:47:50] 2025-06-03 08:47:33,426 | INFO     | mean x: 1748933678.5
[2025-06-03 10:47:50] 2025-06-03 08:47:33,427 | INFO     | mean y: 2489463.6
[2025-06-03 10:47:50] 2025-06-03 08:47:33,427 | INFO     | -- intersect: -15712491002.754717
[2025-06-03 10:47:50] 2025-06-03 08:47:33,427 | INFO     | intersect: -15712491002.754717
[2025-06-03 10:47:50] 2025-06-03 08:47:33,427 | INFO     | chi2: 7.483805446428019
[2025-06-03 10:47:50] 2025-06-03 08:47:33,428 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,429 | INFO     | sum of deviations: 45141156194.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,430 | INFO     | mean x: 1748933526.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,430 | INFO     | mean y: 2499993.623255814
[2025-06-03 10:47:50] 2025-06-03 08:47:33,430 | INFO     | -- intersect: -25616464572.289433
[2025-06-03 10:47:50] 2025-06-03 08:47:33,430 | INFO     | intersect: -25616464572.289433
[2025-06-03 10:47:50] 2025-06-03 08:47:33,430 | INFO     | chi2: 6.709841215876104
[2025-06-03 10:47:50] 2025-06-03 08:47:33,430 | INFO     | current chi2=6.709841215876104 (change=10.341853968442281 %)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,430 | INFO     | right removable region: 214
[2025-06-03 10:47:50] 2025-06-03 08:47:33,431 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,432 | INFO     | sum of deviations: -47891208641.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,433 | INFO     | mean x: 1748933831.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,433 | INFO     | mean y: 2543168.9209302324
[2025-06-03 10:47:50] 2025-06-03 08:47:33,433 | INFO     | -- intersect: 27182249995.330585
[2025-06-03 10:47:50] 2025-06-03 08:47:33,433 | INFO     | intersect: 27182249995.330585
[2025-06-03 10:47:50] 2025-06-03 08:47:33,433 | INFO     | chi2: 2.5569189545974846
[2025-06-03 10:47:50] 2025-06-03 08:47:33,433 | INFO     | current chi2=2.5569189545974846 (change=65.83397346576015 %)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,434 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 10:47:50] 2025-06-03 08:47:33,436 | INFO     | sum of deviations: -85569022337.99998
[2025-06-03 10:47:50] 2025-06-03 08:47:33,436 | INFO     | mean x: 1748933983.5
[2025-06-03 10:47:50] 2025-06-03 08:47:33,436 | INFO     | mean y: 2570343.0285714287
[2025-06-03 10:47:50] 2025-06-03 08:47:33,436 | INFO     | -- intersect: 52117664470.86522
[2025-06-03 10:47:50] 2025-06-03 08:47:33,436 | INFO     | intersect: 52117664470.86522
[2025-06-03 10:47:50] 2025-06-03 08:47:33,436 | INFO     | chi2: 1.1133094947581523
[2025-06-03 10:47:50] 2025-06-03 08:47:33,437 | INFO     | current chi2=1.1133094947581523 (change=56.458944748469285 %)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,437 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,439 | INFO     | sum of deviations: -87770872421.00002
[2025-06-03 10:47:50] 2025-06-03 08:47:33,439 | INFO     | mean x: 1748934136.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,439 | INFO     | mean y: 2571976.575609756
[2025-06-03 10:47:50] 2025-06-03 08:47:33,439 | INFO     | -- intersect: 57466352779.928825
[2025-06-03 10:47:50] 2025-06-03 08:47:33,439 | INFO     | intersect: 57466352779.928825
[2025-06-03 10:47:50] 2025-06-03 08:47:33,440 | INFO     | chi2: 1.0625371388283098
[2025-06-03 10:47:50] 2025-06-03 08:47:33,440 | INFO     | current chi2=1.0625371388283098 (change=4.560488899887804 %)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,440 | INFO     | left removable region: 30
[2025-06-03 10:47:50] 2025-06-03 08:47:33,440 | INFO     | sum of square deviations: 1931608310.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,442 | INFO     | sum of deviations: -56410413802.0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,442 | INFO     | mean x: 1748934410.5
[2025-06-03 10:47:50] 2025-06-03 08:47:33,442 | INFO     | mean y: 2573339.2282608696
[2025-06-03 10:47:50] 2025-06-03 08:47:33,442 | INFO     | -- intersect: 51078204614.00877
[2025-06-03 10:47:50] 2025-06-03 08:47:33,442 | INFO     | intersect: 51078204614.00877
[2025-06-03 10:47:50] 2025-06-03 08:47:33,442 | INFO     | chi2: 0.18223449492490215
[2025-06-03 10:47:50] 2025-06-03 08:47:33,443 | INFO     | -- intersect: 51078204614.00877
[2025-06-03 10:47:50] 2025-06-03 08:47:33,443 | INFO     | current memory leak: -29.20 B/s (using 184 data points, chi2=0.18)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,444 | INFO     | ..............................
[2025-06-03 10:47:50] 2025-06-03 08:47:33,444 | INFO     | . Timing measurements:
[2025-06-03 10:47:50] 2025-06-03 08:47:33,444 | INFO     | . get job = 0 s
[2025-06-03 10:47:50] 2025-06-03 08:47:33,444 | INFO     | . initial setup = 6 s
[2025-06-03 10:47:50] 2025-06-03 08:47:33,444 | INFO     | . payload setup = 166 s
[2025-06-03 10:47:50] 2025-06-03 08:47:33,444 | INFO     | . stage-in = 0 s
[2025-06-03 10:47:50] 2025-06-03 08:47:33,444 | INFO     | . payload execution = 13568 s
[2025-06-03 10:47:50] 2025-06-03 08:47:33,444 | INFO     | . stage-out = 4 s
[2025-06-03 10:47:50] 2025-06-03 08:47:33,445 | INFO     | . log creation = 1 s
[2025-06-03 10:47:50] 2025-06-03 08:47:33,445 | INFO     | ..............................
[2025-06-03 10:47:50] 2025-06-03 08:47:33,727 | INFO     | 
[2025-06-03 10:47:50] 2025-06-03 08:47:33,727 | INFO     | job summary report
[2025-06-03 10:47:50] 2025-06-03 08:47:33,727 | INFO     | --------------------------------------------------
[2025-06-03 10:47:50] 2025-06-03 08:47:33,727 | INFO     | PanDA job id: 6677382074
[2025-06-03 10:47:50] 2025-06-03 08:47:33,727 | INFO     | task id: 45006595
[2025-06-03 10:47:50] 2025-06-03 08:47:33,727 | INFO     | errors: (none)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | pilot state: finished 
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | transexitcode: 0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | exeerrorcode: 0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | exeerrordiag: 
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | exitcode: 0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | exitmsg: OK
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | cpuconsumptiontime: 48770 s
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | nevents: 400
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | neventsw: 0
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | pid: 8838
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | pgrp: 8838
[2025-06-03 10:47:50] 2025-06-03 08:47:33,728 | INFO     | corecount: 8
[2025-06-03 10:47:50] 2025-06-03 08:47:33,729 | INFO     | event service: False
[2025-06-03 10:47:50] 2025-06-03 08:47:33,729 | INFO     | sizes: {0: 2404951, 1: 2405206, 2: 2405234, 12: 2405234, 23: 2405262, 34: 2405290, 45: 2405446, 55: 2405474, 66: 2405502, 77: 2405530, 88: 2405586, 97: 2406100, 98
[2025-06-03 10:47:50] 2025-06-03 08:47:33,729 | INFO     | --------------------------------------------------
[2025-06-03 10:47:50] 2025-06-03 08:47:33,729 | INFO     | 
[2025-06-03 10:47:50] 2025-06-03 08:47:33,729 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 10:47:50] 2025-06-03 08:47:33,784 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,784 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,784 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,784 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,785 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | job 6677382074 has completed (purged errors)
[2025-06-03 10:47:50] 2025-06-03 08:47:33,786 | INFO     | overall cleanup function is called
[2025-06-03 10:47:50] 2025-06-03 08:47:34,799 | INFO     | --- collectZombieJob: --- 10, [8838]
[2025-06-03 10:47:50] 2025-06-03 08:47:34,799 | INFO     | zombie collector waiting for pid 8838
[2025-06-03 10:47:50] 2025-06-03 08:47:34,800 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:47:50] 2025-06-03 08:47:34,800 | INFO     | collected zombie processes
[2025-06-03 10:47:50] 2025-06-03 08:47:34,800 | INFO     | will attempt to kill all subprocesses of pid=8838
[2025-06-03 10:47:50] 2025-06-03 08:47:34,914 | INFO     | process IDs to be killed: [8838] (in reverse order)
[2025-06-03 10:47:50] 2025-06-03 08:47:34,985 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:47:50] 2025-06-03 08:47:34,985 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:47:50] 2025-06-03 08:47:34,989 | INFO     | did not find any defunct processes belonging to 8838
[2025-06-03 10:47:50] 2025-06-03 08:47:34,993 | INFO     | did not find any defunct processes belonging to 8838
[2025-06-03 10:47:50] 2025-06-03 08:47:34,994 | INFO     | ready for new job
[2025-06-03 10:47:50] 2025-06-03 08:47:34,994 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:47:50] 2025-06-03 08:47:34,996 | INFO     | **************************************
[2025-06-03 10:47:50] 2025-06-03 08:47:34,997 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:47:50] 2025-06-03 08:47:34,997 | INFO     | **************************************
[2025-06-03 10:47:50] 2025-06-03 08:47:34,997 | INFO     | 
[2025-06-03 10:47:50] 2025-06-03 08:47:34,998 | INFO     | pilot is running in a VM
[2025-06-03 10:47:50] 2025-06-03 08:47:34,998 | INFO     | architecture information:
[2025-06-03 10:47:50] 2025-06-03 08:47:34,998 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:47:50] 2025-06-03 08:47:35,037 | INFO     | cat /etc/os-release:
[2025-06-03 10:47:50] NAME="CentOS Linux"
[2025-06-03 10:47:50] VERSION="7 (Core)"
[2025-06-03 10:47:50] ID="centos"
[2025-06-03 10:47:50] ID_LIKE="rhel fedora"
[2025-06-03 10:47:50] VERSION_ID="7"
[2025-06-03 10:47:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:47:50] ANSI_COLOR="0;31"
[2025-06-03 10:47:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:47:50] HOME_URL="https://www.centos.org/"
[2025-06-03 10:47:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:47:50] 
[2025-06-03 10:47:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:47:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:47:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:47:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:47:50] 
[2025-06-03 10:47:50] 2025-06-03 08:47:35,037 | INFO     | **************************************
[2025-06-03 10:47:50] 2025-06-03 08:47:35,540 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 10:47:50] 2025-06-03 08:47:35,575 | INFO     | sufficient remaining disk space (497064869888 B)
[2025-06-03 10:47:50] 2025-06-03 08:47:35,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:47:50] 2025-06-03 08:47:35,575 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:47:50] 2025-06-03 08:47:35,575 | INFO     | update_server=False
[2025-06-03 10:47:50] 2025-06-03 08:47:35,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:47:50] 2025-06-03 08:47:35,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:47:50] 2025-06-03 08:47:35,905 | INFO     | all job control threads have been joined
[2025-06-03 10:47:50] 2025-06-03 08:47:36,061 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:47:50] 2025-06-03 08:47:36,128 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:47:50] 2025-06-03 08:47:36,128 | INFO     | aborting loop
[2025-06-03 10:47:50] 2025-06-03 08:47:36,230 | INFO     | all data control threads have been joined
[2025-06-03 10:47:50] 2025-06-03 08:47:36,439 | INFO     | all payload control threads have been joined
[2025-06-03 10:47:50] 2025-06-03 08:47:36,550 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:47:50] 2025-06-03 08:47:36,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:47:50] 2025-06-03 08:47:36,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:47:50] 2025-06-03 08:47:36,581 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:36,586 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:36,699 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:36,912 | INFO     | [job] control thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,133 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,203 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,236 | INFO     | [data] control thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,428 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,445 | INFO     | [payload] control thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,687 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,756 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,766 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:37,838 | INFO     | [job] validate thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:38,067 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:38,157 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:38,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:47:50] 2025-06-03 08:47:42,653 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:47:50] 2025-06-03 08:47:44,595 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140354187851584)>', '<ExcThread(monitor, started 140353575294720)>']
[2025-06-03 10:47:50] 2025-06-03 08:47:45,596 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:47:50] 2025-06-03 08:47:45,596 | INFO     | [monitor] control thread has ended
[2025-06-03 10:47:50] 2025-06-03 08:47:49,621 | INFO     | all workflow threads have been joined
[2025-06-03 10:47:50] 2025-06-03 08:47:49,621 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:47:50] 2025-06-03 08:47:49,621 | INFO     | traces error code: 0
[2025-06-03 10:47:50] 2025-06-03 08:47:49,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:47:50] 2025-06-03 08:47:49,849 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:47:50] 2025-06-03 08:47:49,857 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:47:50] 2025-06-03 08:47:49,871 [wrapper] pilotpid: 32611
[2025-06-03 10:47:50] 2025-06-03 08:47:49,881 [wrapper] Pilot exit status: 0
[2025-06-03 10:47:50] 2025-06-03 08:47:49,927 [wrapper] pandaids: 6677382074
[2025-06-03 10:47:50] 2025-06-03 08:47:49,971 [wrapper] cleanup supervisor_pilot  7849 32612
[2025-06-03 10:47:50] 2025-06-03 08:47:49,984 [wrapper] Test setup, not cleaning
[2025-06-03 10:47:50] 2025-06-03 08:47:49,988 [wrapper] apfmon messages muted
[2025-06-03 10:47:50] 2025-06-03 08:47:49,996 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:47:50] 2025-06-03 08:47:50,001 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:47:50]  *** Error codes and diagnostics ***
[2025-06-03 10:47:50]     "exeErrorCode": 0,
[2025-06-03 10:47:50]     "exeErrorDiag": "",
[2025-06-03 10:47:50]     "pilotErrorCode": 0,
[2025-06-03 10:47:50]     "pilotErrorDiag": "",
[2025-06-03 10:47:50]  *** Listing of results directory ***
[2025-06-03 10:47:50] total 387780
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 10:47:50] -rwx------. 1 boinc boinc     37140 Jun  2 17:59 runpilot2-wrapper.sh
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:59 queuedata.json
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc       100 Jun  3 06:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:47:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 06:51 run_atlas
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc       105 Jun  3 06:51 job.xml
[2025-06-03 10:47:50] -rw-r--r--. 2 boinc boinc 212851477 Jun  3 06:51 EVNT.45006593._000113.pool.root.1
[2025-06-03 10:47:50] -rw-r--r--. 2 boinc boinc    508870 Jun  3 06:51 input.tar.gz
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc      6391 Jun  3 06:51 init_data.xml
[2025-06-03 10:47:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:51 start_atlas.sh
[2025-06-03 10:47:50] drwxrwx--x. 2 boinc boinc        68 Jun  3 06:51 shared
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc         0 Jun  3 06:51 boinc_lockfile
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc      2522 Jun  3 06:51 pandaJob.out
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc    988073 Jun  3 06:54 agis_schedconf.cvmfs.json
[2025-06-03 10:47:50] drwx------. 4 boinc boinc      4096 Jun  3 06:54 pilot3
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc 177234859 Jun  3 10:45 HITS.45006595._002824.pool.root.1
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:45 boinc_task_state.xml
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc      1034 Jun  3 10:46 memory_monitor_summary.json
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc   1603667 Jun  3 10:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc    394466 Jun  3 10:47 log.45006595._002824.job.log.tgz.1
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc        95 Jun  3 10:47 pilot_heartbeat.json
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc      7697 Jun  3 10:47 heartbeat.json
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:47 boinc_mmap_file
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:47 wrapper_checkpoint.txt
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc      4416 Jun  3 10:47 pilotlog.txt
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc   1189149 Jun  3 10:47 log.45006595._002824.job.log.1
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc       357 Jun  3 10:47 output.list
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:47 runtime_log
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc   1607680 Jun  3 10:47 result.tar.gz
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc      8659 Jun  3 10:47 runtime_log.err
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc       656 Jun  3 10:47 hh4LDmpkMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeEfKDmTxWsjm.diag
[2025-06-03 10:47:50] -rw-r--r--. 1 boinc boinc     20512 Jun  3 10:47 stderr.txt
[2025-06-03 10:47:50] HITS file was successfully produced:
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc 177234859 Jun  3 10:45 shared/HITS.pool.root.1
[2025-06-03 10:47:50]  *** Contents of shared directory: ***
[2025-06-03 10:47:50] total 383036
[2025-06-03 10:47:50] -rw-r--r--. 2 boinc boinc 212851477 Jun  3 06:51 ATLAS.root_0
[2025-06-03 10:47:50] -rw-r--r--. 2 boinc boinc    508870 Jun  3 06:51 input.tar.gz
[2025-06-03 10:47:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:51 start_atlas.sh
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc 177234859 Jun  3 10:45 HITS.pool.root.1
[2025-06-03 10:47:50] -rw-------. 1 boinc boinc   1607680 Jun  3 10:47 result.tar.gz
10:47:52 (25756): run_atlas exited; CPU time 48957.744767
10:47:52 (25756): called boinc_finish(0)

</stderr_txt>
]]>

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