Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:32:04 (14181): wrapper (7.7.26015): starting
02:32:04 (14181): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:32:04] Arguments: --nthreads 8
[2025-06-03 02:32:04] Threads: 8
[2025-06-03 02:32:04] Checking for CVMFS
[2025-06-03 02:32:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:32:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:32:06] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:32:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:32:07] 2.11.2.0 25379 31164 100448 146723 0 60 14576083 25165825 4637 130560 0 15997541 99.860 16768272 2555 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:32:07] CVMFS is ok
[2025-06-03 02:32:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:32:07] Checking for apptainer binary...
[2025-06-03 02:32:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:32:07] Running /usr/bin/apptainer --version
[2025-06-03 02:32:07] apptainer version 1.3.2-1.el7
[2025-06-03 02:32:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:36:30] cg-vwn336.simple-grid.lan
[2025-06-03 02:36:30] apptainer works
[2025-06-03 02:36:30] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:36:30] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:36:31] Starting ATLAS job with PandaID=6677387814
[2025-06-03 02:36:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:37:34]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:37:34] 2025-06-03 04:16:17,375 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6677387814/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:37:34] 2025-06-03 04:16:17,376 | INFO     | extracted standard info from prmon json
[2025-06-03 06:37:34] 2025-06-03 04:16:17,376 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:37:34] 2025-06-03 04:16:17,376 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:37:34] 2025-06-03 04:16:17,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:37:34] 2025-06-03 04:16:17,377 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:37:34] 2025-06-03 04:16:17,382 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:37:34] 2025-06-03 04:16:17,383 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 06:37:34] 2025-06-03 04:16:17,385 | INFO     | sum of deviations: -53663015343.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,385 | INFO     | mean x: 1748917572.5
[2025-06-03 06:37:34] 2025-06-03 04:16:17,385 | INFO     | mean y: 2569080.0093457946
[2025-06-03 06:37:34] 2025-06-03 04:16:17,385 | INFO     | -- intersect: 30886612396.822475
[2025-06-03 06:37:34] 2025-06-03 04:16:17,386 | INFO     | intersect: 30886612396.822475
[2025-06-03 06:37:34] 2025-06-03 04:16:17,386 | INFO     | chi2: 2.6867512608858197
[2025-06-03 06:37:34] 2025-06-03 04:16:17,386 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,388 | INFO     | sum of deviations: -36907439755.99999
[2025-06-03 06:37:34] 2025-06-03 04:16:17,388 | INFO     | mean x: 1748917420.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,389 | INFO     | mean y: 2581166.387559809
[2025-06-03 06:37:34] 2025-06-03 04:16:17,389 | INFO     | -- intersect: 22804735629.72254
[2025-06-03 06:37:34] 2025-06-03 04:16:17,389 | INFO     | intersect: 22804735629.72254
[2025-06-03 06:37:34] 2025-06-03 04:16:17,389 | INFO     | chi2: 1.9233399886204479
[2025-06-03 06:37:34] 2025-06-03 04:16:17,389 | INFO     | current chi2=1.9233399886204479 (change=28.41391696281091 %)
[2025-06-03 06:37:34] 2025-06-03 04:16:17,390 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,392 | INFO     | sum of deviations: -34346636911.5
[2025-06-03 06:37:34] 2025-06-03 04:16:17,392 | INFO     | mean x: 1748917267.5
[2025-06-03 06:37:34] 2025-06-03 04:16:17,392 | INFO     | mean y: 2583134.6715686275
[2025-06-03 06:37:34] 2025-06-03 04:16:17,392 | INFO     | -- intersect: 22821498331.23251
[2025-06-03 06:37:34] 2025-06-03 04:16:17,392 | INFO     | intersect: 22821498331.23251
[2025-06-03 06:37:34] 2025-06-03 04:16:17,393 | INFO     | chi2: 1.923279444900012
[2025-06-03 06:37:34] 2025-06-03 04:16:17,393 | INFO     | current chi2=1.923279444900012 (change=0.0031478428563939576 %)
[2025-06-03 06:37:34] 2025-06-03 04:16:17,393 | INFO     | right removable region: 203
[2025-06-03 06:37:34] 2025-06-03 04:16:17,393 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,395 | INFO     | sum of deviations: -91619370900.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,395 | INFO     | mean x: 1748917725.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,395 | INFO     | mean y: 2596660.4210526315
[2025-06-03 06:37:34] 2025-06-03 04:16:17,396 | INFO     | -- intersect: 56606886343.90522
[2025-06-03 06:37:34] 2025-06-03 04:16:17,396 | INFO     | intersect: 56606886343.90522
[2025-06-03 06:37:34] 2025-06-03 04:16:17,396 | INFO     | chi2: 1.022103375883884
[2025-06-03 06:37:34] 2025-06-03 04:16:17,396 | INFO     | current chi2=1.022103375883884 (change=61.957647856582845 %)
[2025-06-03 06:37:34] 2025-06-03 04:16:17,397 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,398 | INFO     | sum of deviations: -94509910190.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,399 | INFO     | mean x: 1748917877.5
[2025-06-03 06:37:34] 2025-06-03 04:16:17,399 | INFO     | mean y: 2598849.1078431373
[2025-06-03 06:37:34] 2025-06-03 04:16:17,399 | INFO     | -- intersect: 62792279935.39204
[2025-06-03 06:37:34] 2025-06-03 04:16:17,399 | INFO     | intersect: 62792279935.39204
[2025-06-03 06:37:34] 2025-06-03 04:16:17,399 | INFO     | chi2: 0.9621898763694509
[2025-06-03 06:37:34] 2025-06-03 04:16:17,400 | INFO     | current chi2=0.9621898763694509 (change=5.861784720417519 %)
[2025-06-03 06:37:34] 2025-06-03 04:16:17,400 | INFO     | left removable region: 20
[2025-06-03 06:37:34] 2025-06-03 04:16:17,400 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,401 | INFO     | sum of deviations: -66647602283.999985
[2025-06-03 06:37:34] 2025-06-03 04:16:17,402 | INFO     | mean x: 1748917847.0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,402 | INFO     | mean y: 2609314.9289617487
[2025-06-03 06:37:34] 2025-06-03 04:16:17,402 | INFO     | -- intersect: 61341400741.10101
[2025-06-03 06:37:34] 2025-06-03 04:16:17,402 | INFO     | intersect: 61341400741.10101
[2025-06-03 06:37:34] 2025-06-03 04:16:17,402 | INFO     | chi2: 0.1577178320301918
[2025-06-03 06:37:34] 2025-06-03 04:16:17,403 | INFO     | -- intersect: 61341400741.10101
[2025-06-03 06:37:34] 2025-06-03 04:16:17,403 | INFO     | current memory leak: -35.07 B/s (using 183 data points, chi2=0.16)
[2025-06-03 06:37:34] 2025-06-03 04:16:17,404 | INFO     | ..............................
[2025-06-03 06:37:34] 2025-06-03 04:16:17,404 | INFO     | . Timing measurements:
[2025-06-03 06:37:34] 2025-06-03 04:16:17,404 | INFO     | . get job = 0 s
[2025-06-03 06:37:34] 2025-06-03 04:16:17,404 | INFO     | . initial setup = 2 s
[2025-06-03 06:37:34] 2025-06-03 04:16:17,404 | INFO     | . payload setup = 15 s
[2025-06-03 06:37:34] 2025-06-03 04:16:17,404 | INFO     | . stage-in = 0 s
[2025-06-03 06:37:34] 2025-06-03 04:16:17,404 | INFO     | . payload execution = 13024 s
[2025-06-03 06:37:34] 2025-06-03 04:16:17,404 | INFO     | . stage-out = 4 s
[2025-06-03 06:37:34] 2025-06-03 04:16:17,405 | INFO     | . log creation = 1 s
[2025-06-03 06:37:34] 2025-06-03 04:16:17,405 | INFO     | ..............................
[2025-06-03 06:37:34] 2025-06-03 04:16:17,565 | INFO     | 
[2025-06-03 06:37:34] 2025-06-03 04:16:17,565 | INFO     | job summary report
[2025-06-03 06:37:34] 2025-06-03 04:16:17,565 | INFO     | --------------------------------------------------
[2025-06-03 06:37:34] 2025-06-03 04:16:17,565 | INFO     | PanDA job id: 6677387814
[2025-06-03 06:37:34] 2025-06-03 04:16:17,565 | INFO     | task id: 45006595
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | errors: (none)
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | pilot state: finished 
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | transexitcode: 0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | exeerrorcode: 0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | exeerrordiag: 
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | exitcode: 0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | exitmsg: OK
[2025-06-03 06:37:34] 2025-06-03 04:16:17,566 | INFO     | cpuconsumptiontime: 49386 s
[2025-06-03 06:37:34] 2025-06-03 04:16:17,567 | INFO     | nevents: 400
[2025-06-03 06:37:34] 2025-06-03 04:16:17,567 | INFO     | neventsw: 0
[2025-06-03 06:37:34] 2025-06-03 04:16:17,567 | INFO     | pid: 26631
[2025-06-03 06:37:34] 2025-06-03 04:16:17,567 | INFO     | pgrp: 26631
[2025-06-03 06:37:34] 2025-06-03 04:16:17,567 | INFO     | corecount: 8
[2025-06-03 06:37:34] 2025-06-03 04:16:17,567 | INFO     | event service: False
[2025-06-03 06:37:34] 2025-06-03 04:16:17,567 | INFO     | sizes: {0: 2405006, 1: 2405205, 9: 2405411, 12: 2405439, 13044: 2434703, 13050: 2443644, 13052: 2443828, 13139: 2443998}
[2025-06-03 06:37:34] 2025-06-03 04:16:17,567 | INFO     | --------------------------------------------------
[2025-06-03 06:37:34] 2025-06-03 04:16:17,568 | INFO     | 
[2025-06-03 06:37:34] 2025-06-03 04:16:17,568 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 06:37:34] 2025-06-03 04:16:18,219 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,220 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,220 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,220 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,220 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,220 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,220 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,220 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,220 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,221 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,221 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,221 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,221 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,221 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,221 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,221 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,221 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,222 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:37:34] 2025-06-03 04:16:18,222 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,222 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:37:34] 2025-06-03 04:16:18,222 | INFO     | job 6677387814 has completed (purged errors)
[2025-06-03 06:37:34] 2025-06-03 04:16:18,222 | INFO     | overall cleanup function is called
[2025-06-03 06:37:34] 2025-06-03 04:16:19,232 | INFO     | --- collectZombieJob: --- 10, [26631]
[2025-06-03 06:37:34] 2025-06-03 04:16:19,232 | INFO     | zombie collector waiting for pid 26631
[2025-06-03 06:37:34] 2025-06-03 04:16:19,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:37:34] 2025-06-03 04:16:19,232 | INFO     | collected zombie processes
[2025-06-03 06:37:34] 2025-06-03 04:16:19,232 | INFO     | will attempt to kill all subprocesses of pid=26631
[2025-06-03 06:37:34] 2025-06-03 04:16:19,381 | INFO     | process IDs to be killed: [26631] (in reverse order)
[2025-06-03 06:37:34] 2025-06-03 04:16:20,223 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:37:34] 2025-06-03 04:16:20,224 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:37:34] 2025-06-03 04:16:20,227 | INFO     | did not find any defunct processes belonging to 26631
[2025-06-03 06:37:34] 2025-06-03 04:16:20,230 | INFO     | did not find any defunct processes belonging to 26631
[2025-06-03 06:37:34] 2025-06-03 04:16:20,231 | INFO     | ready for new job
[2025-06-03 06:37:34] 2025-06-03 04:16:20,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:37:34] 2025-06-03 04:16:20,233 | INFO     | **************************************
[2025-06-03 06:37:34] 2025-06-03 04:16:20,233 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:37:34] 2025-06-03 04:16:20,233 | INFO     | **************************************
[2025-06-03 06:37:34] 2025-06-03 04:16:20,233 | INFO     | 
[2025-06-03 06:37:34] 2025-06-03 04:16:20,234 | INFO     | pilot is running in a VM
[2025-06-03 06:37:34] 2025-06-03 04:16:20,234 | INFO     | architecture information:
[2025-06-03 06:37:34] 2025-06-03 04:16:20,241 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:37:34] 2025-06-03 04:16:20,423 | INFO     | cat /etc/os-release:
[2025-06-03 06:37:34] NAME="CentOS Linux"
[2025-06-03 06:37:34] VERSION="7 (Core)"
[2025-06-03 06:37:34] ID="centos"
[2025-06-03 06:37:34] ID_LIKE="rhel fedora"
[2025-06-03 06:37:34] VERSION_ID="7"
[2025-06-03 06:37:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:37:34] ANSI_COLOR="0;31"
[2025-06-03 06:37:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:37:34] HOME_URL="https://www.centos.org/"
[2025-06-03 06:37:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:37:34] 
[2025-06-03 06:37:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:37:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:37:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:37:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:37:34] 
[2025-06-03 06:37:34] 2025-06-03 04:16:20,424 | INFO     | **************************************
[2025-06-03 06:37:34] 2025-06-03 04:16:20,927 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 06:37:34] 2025-06-03 04:16:21,145 | INFO     | sufficient remaining disk space (496767074304 B)
[2025-06-03 06:37:34] 2025-06-03 04:16:21,146 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:37:34] 2025-06-03 04:16:21,146 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:37:34] 2025-06-03 04:16:21,146 | INFO     | update_server=False
[2025-06-03 06:37:34] 2025-06-03 04:16:21,146 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:37:34] 2025-06-03 04:16:21,370 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:37:34] 2025-06-03 04:16:21,370 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:37:34] 2025-06-03 04:16:21,370 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:37:34] 2025-06-03 04:16:21,732 | INFO     | all payload control threads have been joined
[2025-06-03 06:37:34] 2025-06-03 04:16:21,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:37:34] 2025-06-03 04:16:21,769 | INFO     | aborting loop
[2025-06-03 06:37:34] 2025-06-03 04:16:22,025 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:37:34] 2025-06-03 04:16:22,152 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:22,174 | INFO     | all data control threads have been joined
[2025-06-03 06:37:34] 2025-06-03 04:16:22,231 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:22,586 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:37:34] 2025-06-03 04:16:22,592 | INFO     | all job control threads have been joined
[2025-06-03 06:37:34] 2025-06-03 04:16:22,594 | INFO     | [job] validate thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:22,671 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:37:34] 2025-06-03 04:16:22,738 | INFO     | [payload] control thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:22,775 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:22,817 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:23,013 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:23,050 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:23,080 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:23,180 | INFO     | [data] control thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:23,346 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:23,592 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:23,598 | INFO     | [job] control thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:23,634 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:24,032 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:26,679 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:37:34] 2025-06-03 04:16:28,308 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140659446748992)>', '<ExcThread(monitor, started 140658996127488)>']
[2025-06-03 06:37:34] 2025-06-03 04:16:28,413 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:37:34] 2025-06-03 04:16:28,413 | INFO     | [monitor] control thread has ended
[2025-06-03 06:37:34] 2025-06-03 04:16:33,336 | INFO     | all workflow threads have been joined
[2025-06-03 06:37:34] 2025-06-03 04:16:33,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:37:34] 2025-06-03 04:16:33,336 | INFO     | traces error code: 0
[2025-06-03 06:37:34] 2025-06-03 04:16:33,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:37:34] 2025-06-03 04:16:33,794 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:37:34] 2025-06-03 04:16:33,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:37:34] 2025-06-03 04:16:33,989 [wrapper] pilotpid: 18111
[2025-06-03 06:37:34] 2025-06-03 04:16:34,084 [wrapper] Pilot exit status: 0
[2025-06-03 06:37:34] 2025-06-03 04:16:34,546 [wrapper] pandaids: 6677387814
[2025-06-03 06:37:34] 2025-06-03 04:16:35,210 [wrapper] cleanup supervisor_pilot 16961 18112
[2025-06-03 06:37:34] 2025-06-03 04:16:35,233 [wrapper] Test setup, not cleaning
[2025-06-03 06:37:34] 2025-06-03 04:16:35,313 [wrapper] apfmon messages muted
[2025-06-03 06:37:34] 2025-06-03 04:16:35,350 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:37:34] 2025-06-03 04:16:35,424 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:37:34]  *** Error codes and diagnostics ***
[2025-06-03 06:37:34]     "exeErrorCode": 0,
[2025-06-03 06:37:34]     "exeErrorDiag": "",
[2025-06-03 06:37:34]     "pilotErrorCode": 0,
[2025-06-03 06:37:34]     "pilotErrorDiag": "",
[2025-06-03 06:37:34]  *** Listing of results directory ***
[2025-06-03 06:37:34] total 395140
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 06:37:34] -rwx------. 1 boinc boinc     37140 Jun  2 19:34 runpilot2-wrapper.sh
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:34 queuedata.json
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:37:34] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:32 run_atlas
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:32 job.xml
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc      6391 Jun  3 02:32 init_data.xml
[2025-06-03 06:37:34] -rw-r--r--. 2 boinc boinc 214815561 Jun  3 02:32 EVNT.45006593._000231.pool.root.1
[2025-06-03 06:37:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:32 start_atlas.sh
[2025-06-03 06:37:34] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:32 shared
[2025-06-03 06:37:34] -rw-r--r--. 2 boinc boinc    508877 Jun  3 02:32 input.tar.gz
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:32 boinc_lockfile
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc      2521 Jun  3 02:36 pandaJob.out
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc    988081 Jun  3 02:36 agis_schedconf.cvmfs.json
[2025-06-03 06:37:34] drwx------. 4 boinc boinc      4096 Jun  3 02:36 pilot3
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc 182928716 Jun  3 06:13 HITS.45006595._005775.pool.root.1
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc       530 Jun  3 06:13 boinc_task_state.xml
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc      1016 Jun  3 06:14 memory_monitor_summary.json
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc   1603667 Jun  3 06:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc    388990 Jun  3 06:14 log.45006595._005775.job.log.tgz.1
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc        95 Jun  3 06:16 pilot_heartbeat.json
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc      7686 Jun  3 06:16 heartbeat.json
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc      4416 Jun  3 06:16 pilotlog.txt
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc   1139294 Jun  3 06:16 log.45006595._005775.job.log.1
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc       357 Jun  3 06:16 output.list
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:16 runtime_log
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc   1546240 Jun  3 06:16 result.tar.gz
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc      8659 Jun  3 06:16 runtime_log.err
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc       656 Jun  3 06:16 FClNDmoEOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmZzVKDmXIkcgm.diag
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:37 boinc_mmap_file
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:37 wrapper_checkpoint.txt
[2025-06-03 06:37:34] -rw-r--r--. 1 boinc boinc     20477 Jun  3 06:37 stderr.txt
[2025-06-03 06:37:34] HITS file was successfully produced:
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc 182928716 Jun  3 06:13 shared/HITS.pool.root.1
[2025-06-03 06:37:34]  *** Contents of shared directory: ***
[2025-06-03 06:37:34] total 390456
[2025-06-03 06:37:34] -rw-r--r--. 2 boinc boinc 214815561 Jun  3 02:32 ATLAS.root_0
[2025-06-03 06:37:34] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:32 start_atlas.sh
[2025-06-03 06:37:34] -rw-r--r--. 2 boinc boinc    508877 Jun  3 02:32 input.tar.gz
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc 182928716 Jun  3 06:13 HITS.pool.root.1
[2025-06-03 06:37:34] -rw-------. 1 boinc boinc   1546240 Jun  3 06:16 result.tar.gz
06:37:36 (14181): run_atlas exited; CPU time 49549.467468
06:37:36 (14181): called boinc_finish(0)

</stderr_txt>
]]>

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