Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:49:57 (22081): wrapper (7.7.26015): starting
22:49:57 (22081): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 22:49:57] Arguments: --nthreads 8
[2025-06-02 22:49:57] Threads: 8
[2025-06-02 22:49:57] Checking for CVMFS
[2025-06-02 22:49:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 22:49:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 22:49:59] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 22:49:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 22:49:59] 2.11.2.0 16729 30942 88632 146718 0 114 13713441 25165825 4353 130560 0 15749359 99.828 18288961 2632 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 22:49:59] CVMFS is ok
[2025-06-02 22:49:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 22:49:59] Checking for apptainer binary...
[2025-06-02 22:49:59] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 22:49:59] Running /usr/bin/apptainer --version
[2025-06-02 22:49:59] apptainer version 1.3.2-1.el7
[2025-06-02 22:49:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 22:50:00] cg-vwn332.simple-grid.lan
[2025-06-02 22:50:00] apptainer works
[2025-06-02 22:50:00] Set ATHENA_PROC_NUMBER=8
[2025-06-02 22:50:00] Set ATHENA_CORE_NUMBER=8
[2025-06-02 22:50:00] Starting ATLAS job with PandaID=6677390088
[2025-06-02 22:50:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:13:09]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:13:09] 2025-06-03 00:28:45,761 | INFO     | using path: /var/lib/boinc/slots/20/PanDA_Pilot-6677390088/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:13:09] 2025-06-03 00:28:45,761 | INFO     | extracted standard info from prmon json
[2025-06-03 03:13:09] 2025-06-03 00:28:45,761 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:13:09] 2025-06-03 00:28:45,762 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:13:09] 2025-06-03 00:28:45,762 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:13:09] 2025-06-03 00:28:45,762 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:13:09] 2025-06-03 00:28:45,767 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:13:09] 2025-06-03 00:28:45,768 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,769 | INFO     | sum of deviations: -58816280947.00001
[2025-06-03 03:13:09] 2025-06-03 00:28:45,769 | INFO     | mean x: 1748903943.0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,770 | INFO     | mean y: 2593169.488262911
[2025-06-03 03:13:09] 2025-06-03 00:28:45,770 | INFO     | -- intersect: 34331174421.528484
[2025-06-03 03:13:09] 2025-06-03 00:28:45,770 | INFO     | intersect: 34331174421.528484
[2025-06-03 03:13:09] 2025-06-03 00:28:45,770 | INFO     | chi2: 2.702105811437531
[2025-06-03 03:13:09] 2025-06-03 00:28:45,771 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,772 | INFO     | sum of deviations: -41204257338.5
[2025-06-03 03:13:09] 2025-06-03 00:28:45,772 | INFO     | mean x: 1748903790.5
[2025-06-03 03:13:09] 2025-06-03 00:28:45,772 | INFO     | mean y: 2606005.1875
[2025-06-03 03:13:09] 2025-06-03 00:28:45,772 | INFO     | -- intersect: 25828158386.133236
[2025-06-03 03:13:09] 2025-06-03 00:28:45,773 | INFO     | intersect: 25828158386.133236
[2025-06-03 03:13:09] 2025-06-03 00:28:45,773 | INFO     | chi2: 1.9392860163553192
[2025-06-03 03:13:09] 2025-06-03 00:28:45,773 | INFO     | current chi2=1.9392860163553192 (change=28.230567132246705 %)
[2025-06-03 03:13:09] 2025-06-03 00:28:45,774 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,775 | INFO     | sum of deviations: -37676355187.00001
[2025-06-03 03:13:09] 2025-06-03 00:28:45,775 | INFO     | mean x: 1748903638.0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,775 | INFO     | mean y: 2608744.6354679805
[2025-06-03 03:13:09] 2025-06-03 00:28:45,776 | INFO     | -- intersect: 25405243558.136143
[2025-06-03 03:13:09] 2025-06-03 00:28:45,776 | INFO     | intersect: 25405243558.136143
[2025-06-03 03:13:09] 2025-06-03 00:28:45,776 | INFO     | chi2: 1.940226568321459
[2025-06-03 03:13:09] 2025-06-03 00:28:45,776 | INFO     | current chi2=1.940226568321459 (change=-0.04849990966817331 %)
[2025-06-03 03:13:09] 2025-06-03 00:28:45,776 | INFO     | right removable region: 202
[2025-06-03 03:13:09] 2025-06-03 00:28:45,777 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,778 | INFO     | sum of deviations: -97139269043.5
[2025-06-03 03:13:09] 2025-06-03 00:28:45,779 | INFO     | mean x: 1748904095.5
[2025-06-03 03:13:09] 2025-06-03 00:28:45,779 | INFO     | mean y: 2621286.956730769
[2025-06-03 03:13:09] 2025-06-03 00:28:45,779 | INFO     | -- intersect: 60886517283.93605
[2025-06-03 03:13:09] 2025-06-03 00:28:45,779 | INFO     | intersect: 60886517283.93605
[2025-06-03 03:13:09] 2025-06-03 00:28:45,779 | INFO     | chi2: 1.0281484743741738
[2025-06-03 03:13:09] 2025-06-03 00:28:45,780 | INFO     | current chi2=1.0281484743741738 (change=61.95010313725668 %)
[2025-06-03 03:13:09] 2025-06-03 00:28:45,780 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,782 | INFO     | sum of deviations: -100237228554.99995
[2025-06-03 03:13:09] 2025-06-03 00:28:45,782 | INFO     | mean x: 1748904248.0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,782 | INFO     | mean y: 2623652.78817734
[2025-06-03 03:13:09] 2025-06-03 00:28:45,782 | INFO     | -- intersect: 67585875461.044044
[2025-06-03 03:13:09] 2025-06-03 00:28:45,782 | INFO     | intersect: 67585875461.044044
[2025-06-03 03:13:09] 2025-06-03 00:28:45,782 | INFO     | chi2: 0.9565687074561906
[2025-06-03 03:13:09] 2025-06-03 00:28:45,782 | INFO     | current chi2=0.9565687074561906 (change=6.962006821198975 %)
[2025-06-03 03:13:09] 2025-06-03 00:28:45,783 | INFO     | left removable region: 20
[2025-06-03 03:13:09] 2025-06-03 00:28:45,783 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 03:13:09] 2025-06-03 00:28:45,784 | INFO     | sum of deviations: -72045371107.5
[2025-06-03 03:13:09] 2025-06-03 00:28:45,784 | INFO     | mean x: 1748904217.5
[2025-06-03 03:13:09] 2025-06-03 00:28:45,784 | INFO     | mean y: 2637423.9725274723
[2025-06-03 03:13:09] 2025-06-03 00:28:45,784 | INFO     | -- intersect: 67407717856.36378
[2025-06-03 03:13:09] 2025-06-03 00:28:45,784 | INFO     | intersect: 67407717856.36378
[2025-06-03 03:13:09] 2025-06-03 00:28:45,785 | INFO     | chi2: 0.1466163033260098
[2025-06-03 03:13:09] 2025-06-03 00:28:45,785 | INFO     | -- intersect: 67407717856.36378
[2025-06-03 03:13:09] 2025-06-03 00:28:45,785 | INFO     | current memory leak: -38.54 B/s (using 182 data points, chi2=0.15)
[2025-06-03 03:13:09] 2025-06-03 00:28:45,786 | INFO     | ..............................
[2025-06-03 03:13:09] 2025-06-03 00:28:45,786 | INFO     | . Timing measurements:
[2025-06-03 03:13:09] 2025-06-03 00:28:45,786 | INFO     | . get job = 0 s
[2025-06-03 03:13:09] 2025-06-03 00:28:45,786 | INFO     | . initial setup = 2 s
[2025-06-03 03:13:09] 2025-06-03 00:28:45,786 | INFO     | . payload setup = 13 s
[2025-06-03 03:13:09] 2025-06-03 00:28:45,786 | INFO     | . stage-in = 0 s
[2025-06-03 03:13:09] 2025-06-03 00:28:45,786 | INFO     | . payload execution = 12966 s
[2025-06-03 03:13:09] 2025-06-03 00:28:45,787 | INFO     | . stage-out = 8 s
[2025-06-03 03:13:09] 2025-06-03 00:28:45,787 | INFO     | . log creation = 0 s
[2025-06-03 03:13:09] 2025-06-03 00:28:45,787 | INFO     | ..............................
[2025-06-03 03:13:09] 2025-06-03 00:28:45,993 | INFO     | 
[2025-06-03 03:13:09] 2025-06-03 00:28:45,993 | INFO     | job summary report
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | --------------------------------------------------
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | PanDA job id: 6677390088
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | task id: 45006595
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | errors: (none)
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | pilot state: finished 
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | transexitcode: 0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | exeerrorcode: 0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | exeerrordiag: 
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | exitcode: 0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | exitmsg: OK
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | cpuconsumptiontime: 49345 s
[2025-06-03 03:13:09] 2025-06-03 00:28:45,994 | INFO     | nevents: 400
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | neventsw: 0
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | pid: 2261
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | pgrp: 2261
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | corecount: 8
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | event service: False
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | sizes: {0: 2405007, 1: 2405206, 10: 2405412, 12: 2405440, 12984: 2434920, 12992: 2443863, 12995: 2444047, 13083: 2444217}
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | --------------------------------------------------
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | 
[2025-06-03 03:13:09] 2025-06-03 00:28:45,995 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-06-03 03:13:09] 2025-06-03 00:28:46,370 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,370 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,370 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,370 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,370 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,370 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,370 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,370 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,371 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:13:09] 2025-06-03 00:28:46,372 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,372 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:13:09] 2025-06-03 00:28:46,372 | INFO     | job 6677390088 has completed (purged errors)
[2025-06-03 03:13:09] 2025-06-03 00:28:46,372 | INFO     | overall cleanup function is called
[2025-06-03 03:13:09] 2025-06-03 00:28:47,381 | INFO     | --- collectZombieJob: --- 10, [2261]
[2025-06-03 03:13:09] 2025-06-03 00:28:47,381 | INFO     | zombie collector waiting for pid 2261
[2025-06-03 03:13:09] 2025-06-03 00:28:47,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:13:09] 2025-06-03 00:28:47,382 | INFO     | collected zombie processes
[2025-06-03 03:13:09] 2025-06-03 00:28:47,382 | INFO     | will attempt to kill all subprocesses of pid=2261
[2025-06-03 03:13:09] 2025-06-03 00:28:47,512 | INFO     | process IDs to be killed: [2261] (in reverse order)
[2025-06-03 03:13:09] 2025-06-03 00:28:48,394 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:13:09] 2025-06-03 00:28:48,394 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:13:09] 2025-06-03 00:28:48,398 | INFO     | did not find any defunct processes belonging to 2261
[2025-06-03 03:13:09] 2025-06-03 00:28:48,401 | INFO     | did not find any defunct processes belonging to 2261
[2025-06-03 03:13:09] 2025-06-03 00:28:48,402 | INFO     | ready for new job
[2025-06-03 03:13:09] 2025-06-03 00:28:48,402 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:13:09] 2025-06-03 00:28:48,404 | INFO     | **************************************
[2025-06-03 03:13:09] 2025-06-03 00:28:48,404 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:13:09] 2025-06-03 00:28:48,405 | INFO     | **************************************
[2025-06-03 03:13:09] 2025-06-03 00:28:48,405 | INFO     | 
[2025-06-03 03:13:09] 2025-06-03 00:28:48,405 | INFO     | pilot is running in a VM
[2025-06-03 03:13:09] 2025-06-03 00:28:48,405 | INFO     | architecture information:
[2025-06-03 03:13:09] 2025-06-03 00:28:48,412 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:13:09] 2025-06-03 00:28:48,607 | INFO     | cat /etc/os-release:
[2025-06-03 03:13:09] NAME="CentOS Linux"
[2025-06-03 03:13:09] VERSION="7 (Core)"
[2025-06-03 03:13:09] ID="centos"
[2025-06-03 03:13:09] ID_LIKE="rhel fedora"
[2025-06-03 03:13:09] VERSION_ID="7"
[2025-06-03 03:13:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:13:09] ANSI_COLOR="0;31"
[2025-06-03 03:13:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:13:09] HOME_URL="https://www.centos.org/"
[2025-06-03 03:13:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:13:09] 
[2025-06-03 03:13:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:13:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:13:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:13:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:13:09] 
[2025-06-03 03:13:09] 2025-06-03 00:28:48,607 | INFO     | **************************************
[2025-06-03 03:13:09] 2025-06-03 00:28:49,110 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-06-03 03:13:09] 2025-06-03 00:28:49,285 | INFO     | sufficient remaining disk space (496933797888 B)
[2025-06-03 03:13:09] 2025-06-03 00:28:49,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:13:09] 2025-06-03 00:28:49,285 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:13:09] 2025-06-03 00:28:49,285 | INFO     | update_server=False
[2025-06-03 03:13:09] 2025-06-03 00:28:49,286 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:13:09] 2025-06-03 00:28:49,286 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:13:09] 2025-06-03 00:28:49,286 | INFO     | aborting loop
[2025-06-03 03:13:09] 2025-06-03 00:28:49,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:13:09] 2025-06-03 00:28:49,292 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:13:09] 2025-06-03 00:28:49,850 | INFO     | all job control threads have been joined
[2025-06-03 03:13:09] 2025-06-03 00:28:50,011 | INFO     | all data control threads have been joined
[2025-06-03 03:13:09] 2025-06-03 00:28:50,064 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:13:09] 2025-06-03 00:28:50,064 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:13:09] 2025-06-03 00:28:50,065 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:13:09] 2025-06-03 00:28:50,232 | INFO     | all payload control threads have been joined
[2025-06-03 03:13:09] 2025-06-03 00:28:50,291 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:50,292 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:50,627 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:50,856 | INFO     | [job] control thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:50,879 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:50,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:13:09] 2025-06-03 00:28:51,017 | INFO     | [data] control thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,075 | INFO     | [job] validate thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,122 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,238 | INFO     | [payload] control thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,299 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,470 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,499 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,549 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:51,932 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:53,301 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:13:09] 2025-06-03 00:28:54,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862116132672)>', '<ExcThread(monitor, started 139861826717440)>']
[2025-06-03 03:13:09] 2025-06-03 00:28:55,095 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:13:09] 2025-06-03 00:28:55,095 | INFO     | [monitor] control thread has ended
[2025-06-03 03:13:09] 2025-06-03 00:28:59,783 | INFO     | all workflow threads have been joined
[2025-06-03 03:13:09] 2025-06-03 00:28:59,783 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:13:09] 2025-06-03 00:28:59,784 | INFO     | traces error code: 0
[2025-06-03 03:13:09] 2025-06-03 00:28:59,784 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:13:09] 2025-06-03 00:29:00,037 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:13:09] 2025-06-03 00:29:00,040 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:13:09] 2025-06-03 00:29:00,048 [wrapper] pilotpid: 26092
[2025-06-03 03:13:09] 2025-06-03 00:29:00,055 [wrapper] Pilot exit status: 0
[2025-06-03 03:13:09] 2025-06-03 00:29:00,233 [wrapper] pandaids: 6677390088
[2025-06-03 03:13:09] 2025-06-03 00:29:00,334 [wrapper] cleanup supervisor_pilot 24705 26093
[2025-06-03 03:13:09] 2025-06-03 00:29:00,346 [wrapper] Test setup, not cleaning
[2025-06-03 03:13:09] 2025-06-03 00:29:00,411 [wrapper] apfmon messages muted
[2025-06-03 03:13:09] 2025-06-03 00:29:00,473 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:13:09] 2025-06-03 00:29:00,491 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:13:09]  *** Error codes and diagnostics ***
[2025-06-03 03:13:09]     "exeErrorCode": 0,
[2025-06-03 03:13:09]     "exeErrorDiag": "",
[2025-06-03 03:13:09]     "pilotErrorCode": 0,
[2025-06-03 03:13:09]     "pilotErrorDiag": "",
[2025-06-03 03:13:09]  *** Listing of results directory ***
[2025-06-03 03:13:09] total 395564
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:47 pilot3.tar.gz
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:52 queuedata.json
[2025-06-03 03:13:09] -rwx------. 1 boinc boinc     37140 Jun  2 19:52 runpilot2-wrapper.sh
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc       100 Jun  2 22:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:13:09] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 22:49 run_atlas
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc       105 Jun  2 22:49 job.xml
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc      6391 Jun  2 22:49 init_data.xml
[2025-06-03 03:13:09] -rw-r--r--. 2 boinc boinc 217282087 Jun  2 22:49 EVNT.45006593._000256.pool.root.1
[2025-06-03 03:13:09] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:49 start_atlas.sh
[2025-06-03 03:13:09] drwxrwx--x. 2 boinc boinc        68 Jun  2 22:49 shared
[2025-06-03 03:13:09] -rw-r--r--. 2 boinc boinc    508874 Jun  2 22:49 input.tar.gz
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc         0 Jun  2 22:49 boinc_lockfile
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc      2521 Jun  2 22:50 pandaJob.out
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc    987975 Jun  2 22:50 agis_schedconf.cvmfs.json
[2025-06-03 03:13:09] drwx------. 4 boinc boinc      4096 Jun  2 22:50 pilot3
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc 180917184 Jun  3 02:25 HITS.45006595._006395.pool.root.1
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:26 boinc_task_state.xml
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc      1014 Jun  3 02:27 memory_monitor_summary.json
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc   1603667 Jun  3 02:27 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc    383327 Jun  3 02:27 log.45006595._006395.job.log.tgz.1
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc        95 Jun  3 02:28 pilot_heartbeat.json
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc      7690 Jun  3 02:28 heartbeat.json
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc      4417 Jun  3 02:28 pilotlog.txt
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc   1136954 Jun  3 02:29 log.45006595._006395.job.log.1
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc       357 Jun  3 02:29 output.list
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:29 runtime_log
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc   1536000 Jun  3 02:29 result.tar.gz
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc      8673 Jun  3 02:29 runtime_log.err
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc       656 Jun  3 02:29 mHLLDmsVOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHrfKDmklC6Rn.diag
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:13 boinc_mmap_file
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc        28 Jun  3 03:13 wrapper_checkpoint.txt
[2025-06-03 03:13:09] -rw-r--r--. 1 boinc boinc     20475 Jun  3 03:13 stderr.txt
[2025-06-03 03:13:09] HITS file was successfully produced:
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc 180917184 Jun  3 02:25 shared/HITS.pool.root.1
[2025-06-03 03:13:09]  *** Contents of shared directory: ***
[2025-06-03 03:13:09] total 390888
[2025-06-03 03:13:09] -rw-r--r--. 2 boinc boinc 217282087 Jun  2 22:49 ATLAS.root_0
[2025-06-03 03:13:09] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:49 start_atlas.sh
[2025-06-03 03:13:09] -rw-r--r--. 2 boinc boinc    508874 Jun  2 22:49 input.tar.gz
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc 180917184 Jun  3 02:25 HITS.pool.root.1
[2025-06-03 03:13:09] -rw-------. 1 boinc boinc   1536000 Jun  3 02:29 result.tar.gz
03:13:11 (22081): run_atlas exited; CPU time 49508.740583
03:13:11 (22081): called boinc_finish(0)

</stderr_txt>
]]>

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