Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:13:15 (22334): wrapper (7.7.26015): starting
03:13:15 (22334): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:13:15] Arguments: --nthreads 8
[2025-06-03 03:13:15] Threads: 8
[2025-06-03 03:13:15] Checking for CVMFS
[2025-06-03 03:13:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:13:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:13:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:13:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:13:16] 2.11.2.0 16729 31205 88164 146723 1 154 13937215 25165824 4353 130560 0 15889032 99.829 18387432 2641 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 03:13:16] CVMFS is ok
[2025-06-03 03:13:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:13:16] Checking for apptainer binary...
[2025-06-03 03:13:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:13:16] Running /usr/bin/apptainer --version
[2025-06-03 03:13:16] apptainer version 1.3.2-1.el7
[2025-06-03 03:13:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:13:17] cg-vwn332.simple-grid.lan
[2025-06-03 03:13:17] apptainer works
[2025-06-03 03:13:17] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:13:17] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:13:17] Starting ATLAS job with PandaID=6677388921
[2025-06-03 03:13:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/20 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:48:04]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:48:04] 2025-06-03 04:46:36,937 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:48:04] 2025-06-03 04:46:36,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:48:04] 2025-06-03 04:46:36,938 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:48:04] 2025-06-03 04:46:36,938 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:48:04] 2025-06-03 04:46:36,942 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:48:04] 2025-06-03 04:46:36,943 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,945 | INFO     | sum of deviations: -41477595441.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,945 | INFO     | mean x: 1748919557.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,945 | INFO     | mean y: 2521834.5555555555
[2025-06-03 06:48:04] 2025-06-03 04:46:36,945 | INFO     | -- intersect: 26378227076.319016
[2025-06-03 06:48:04] 2025-06-03 04:46:36,945 | INFO     | intersect: 26378227076.319016
[2025-06-03 06:48:04] 2025-06-03 04:46:36,945 | INFO     | chi2: 2.6013650208135095
[2025-06-03 06:48:04] 2025-06-03 04:46:36,946 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 06:48:04] 2025-06-03 04:46:36,947 | INFO     | sum of deviations: -26158895136.5
[2025-06-03 06:48:04] 2025-06-03 04:46:36,948 | INFO     | mean x: 1748919404.5
[2025-06-03 06:48:04] 2025-06-03 04:46:36,948 | INFO     | mean y: 2533628.836633663
[2025-06-03 06:48:04] 2025-06-03 04:46:36,948 | INFO     | -- intersect: 17903121939.26266
[2025-06-03 06:48:04] 2025-06-03 04:46:36,948 | INFO     | intersect: 17903121939.26266
[2025-06-03 06:48:04] 2025-06-03 04:46:36,948 | INFO     | chi2: 1.789497472285759
[2025-06-03 06:48:04] 2025-06-03 04:46:36,948 | INFO     | current chi2=1.789497472285759 (change=31.20928981638493 %)
[2025-06-03 06:48:04] 2025-06-03 04:46:36,949 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,950 | INFO     | sum of deviations: -25008509282.000004
[2025-06-03 06:48:04] 2025-06-03 04:46:36,950 | INFO     | mean x: 1748919252.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,950 | INFO     | mean y: 2534577.0913705584
[2025-06-03 06:48:04] 2025-06-03 04:46:36,950 | INFO     | -- intersect: 18452334106.898884
[2025-06-03 06:48:04] 2025-06-03 04:46:36,951 | INFO     | intersect: 18452334106.898884
[2025-06-03 06:48:04] 2025-06-03 04:46:36,951 | INFO     | chi2: 1.7873958618831274
[2025-06-03 06:48:04] 2025-06-03 04:46:36,951 | INFO     | current chi2=1.7873958618831274 (change=0.11744137307706029 %)
[2025-06-03 06:48:04] 2025-06-03 04:46:36,951 | INFO     | right removable region: 196
[2025-06-03 06:48:04] 2025-06-03 04:46:36,952 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 06:48:04] 2025-06-03 04:46:36,953 | INFO     | sum of deviations: -74882353648.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,953 | INFO     | mean x: 1748919709.5
[2025-06-03 06:48:04] 2025-06-03 04:46:36,953 | INFO     | mean y: 2547761.198019802
[2025-06-03 06:48:04] 2025-06-03 04:46:36,953 | INFO     | -- intersect: 51244712659.12634
[2025-06-03 06:48:04] 2025-06-03 04:46:36,954 | INFO     | intersect: 51244712659.12634
[2025-06-03 06:48:04] 2025-06-03 04:46:36,954 | INFO     | chi2: 1.0542369109978302
[2025-06-03 06:48:04] 2025-06-03 04:46:36,954 | INFO     | current chi2=1.0542369109978302 (change=59.47370313036097 %)
[2025-06-03 06:48:04] 2025-06-03 04:46:36,954 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,956 | INFO     | sum of deviations: -72077652460.00003
[2025-06-03 06:48:04] 2025-06-03 04:46:36,956 | INFO     | mean x: 1748919862.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,956 | INFO     | mean y: 2545419.4771573604
[2025-06-03 06:48:04] 2025-06-03 04:46:36,956 | INFO     | -- intersect: 53177194387.71326
[2025-06-03 06:48:04] 2025-06-03 04:46:36,956 | INFO     | intersect: 53177194387.71326
[2025-06-03 06:48:04] 2025-06-03 04:46:36,957 | INFO     | chi2: 1.043285609426944
[2025-06-03 06:48:04] 2025-06-03 04:46:36,957 | INFO     | current chi2=1.043285609426944 (change=1.0387894273708214 %)
[2025-06-03 06:48:04] 2025-06-03 04:46:36,957 | INFO     | left removable region: 20
[2025-06-03 06:48:04] 2025-06-03 04:46:36,957 | INFO     | sum of square deviations: 1690450300.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,958 | INFO     | sum of deviations: -44347754753.0
[2025-06-03 06:48:04] 2025-06-03 04:46:36,958 | INFO     | mean x: 1748919831.5
[2025-06-03 06:48:04] 2025-06-03 04:46:36,959 | INFO     | mean y: 2550176.965909091
[2025-06-03 06:48:04] 2025-06-03 04:46:36,959 | INFO     | -- intersect: 45884211276.39018
[2025-06-03 06:48:04] 2025-06-03 04:46:36,959 | INFO     | intersect: 45884211276.39018
[2025-06-03 06:48:04] 2025-06-03 04:46:36,959 | INFO     | chi2: 0.19106419048210205
[2025-06-03 06:48:04] 2025-06-03 04:46:36,959 | INFO     | -- intersect: 45884211276.39018
[2025-06-03 06:48:04] 2025-06-03 04:46:36,959 | INFO     | current memory leak: -26.23 B/s (using 176 data points, chi2=0.19)
[2025-06-03 06:48:04] 2025-06-03 04:46:36,960 | INFO     | ..............................
[2025-06-03 06:48:04] 2025-06-03 04:46:36,960 | INFO     | . Timing measurements:
[2025-06-03 06:48:04] 2025-06-03 04:46:36,960 | INFO     | . get job = 0 s
[2025-06-03 06:48:04] 2025-06-03 04:46:36,961 | INFO     | . initial setup = 2 s
[2025-06-03 06:48:04] 2025-06-03 04:46:36,961 | INFO     | . payload setup = 13 s
[2025-06-03 06:48:04] 2025-06-03 04:46:36,961 | INFO     | . stage-in = 0 s
[2025-06-03 06:48:04] 2025-06-03 04:46:36,961 | INFO     | . payload execution = 12643 s
[2025-06-03 06:48:04] 2025-06-03 04:46:36,961 | INFO     | . stage-out = 4 s
[2025-06-03 06:48:04] 2025-06-03 04:46:36,961 | INFO     | . log creation = 1 s
[2025-06-03 06:48:04] 2025-06-03 04:46:36,961 | INFO     | ..............................
[2025-06-03 06:48:04] 2025-06-03 04:46:37,139 | INFO     | 
[2025-06-03 06:48:04] 2025-06-03 04:46:37,139 | INFO     | job summary report
[2025-06-03 06:48:04] 2025-06-03 04:46:37,139 | INFO     | --------------------------------------------------
[2025-06-03 06:48:04] 2025-06-03 04:46:37,139 | INFO     | PanDA job id: 6677388921
[2025-06-03 06:48:04] 2025-06-03 04:46:37,139 | INFO     | task id: 45006595
[2025-06-03 06:48:04] 2025-06-03 04:46:37,139 | INFO     | errors: (none)
[2025-06-03 06:48:04] 2025-06-03 04:46:37,139 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | pilot state: finished 
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | transexitcode: 0
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | exeerrorcode: 0
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | exeerrordiag: 
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | exitcode: 0
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | exitmsg: OK
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | cpuconsumptiontime: 47552 s
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | nevents: 400
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | neventsw: 0
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | pid: 2203
[2025-06-03 06:48:04] 2025-06-03 04:46:37,140 | INFO     | pgrp: 2203
[2025-06-03 06:48:04] 2025-06-03 04:46:37,141 | INFO     | corecount: 8
[2025-06-03 06:48:04] 2025-06-03 04:46:37,141 | INFO     | event service: False
[2025-06-03 06:48:04] 2025-06-03 04:46:37,141 | INFO     | sizes: {0: 2405178, 1: 2405178, 10: 2405412, 12: 2405440, 12660: 2434629, 12661: 2434628, 12665: 2443783, 12667: 2443839, 12757: 2444009}
[2025-06-03 06:48:04] 2025-06-03 04:46:37,141 | INFO     | --------------------------------------------------
[2025-06-03 06:48:04] 2025-06-03 04:46:37,141 | INFO     | 
[2025-06-03 06:48:04] 2025-06-03 04:46:37,141 | INFO     | executing command: ls -lF /var/lib/boinc/slots/20
[2025-06-03 06:48:04] 2025-06-03 04:46:37,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,760 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,760 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,760 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,761 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:48:04] 2025-06-03 04:46:37,762 | INFO     | job 6677388921 has completed (purged errors)
[2025-06-03 06:48:04] 2025-06-03 04:46:37,762 | INFO     | overall cleanup function is called
[2025-06-03 06:48:04] 2025-06-03 04:46:38,771 | INFO     | --- collectZombieJob: --- 10, [2203]
[2025-06-03 06:48:04] 2025-06-03 04:46:38,771 | INFO     | zombie collector waiting for pid 2203
[2025-06-03 06:48:04] 2025-06-03 04:46:38,772 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:48:04] 2025-06-03 04:46:38,772 | INFO     | collected zombie processes
[2025-06-03 06:48:04] 2025-06-03 04:46:38,772 | INFO     | will attempt to kill all subprocesses of pid=2203
[2025-06-03 06:48:04] 2025-06-03 04:46:38,895 | INFO     | process IDs to be killed: [2203] (in reverse order)
[2025-06-03 06:48:04] 2025-06-03 04:46:39,388 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:48:04] 2025-06-03 04:46:39,389 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:48:04] 2025-06-03 04:46:39,393 | INFO     | did not find any defunct processes belonging to 2203
[2025-06-03 06:48:04] 2025-06-03 04:46:39,396 | INFO     | did not find any defunct processes belonging to 2203
[2025-06-03 06:48:04] 2025-06-03 04:46:39,397 | INFO     | ready for new job
[2025-06-03 06:48:04] 2025-06-03 04:46:39,397 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:48:04] 2025-06-03 04:46:39,399 | INFO     | **************************************
[2025-06-03 06:48:04] 2025-06-03 04:46:39,399 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:48:04] 2025-06-03 04:46:39,399 | INFO     | **************************************
[2025-06-03 06:48:04] 2025-06-03 04:46:39,399 | INFO     | 
[2025-06-03 06:48:04] 2025-06-03 04:46:39,400 | INFO     | pilot is running in a VM
[2025-06-03 06:48:04] 2025-06-03 04:46:39,400 | INFO     | architecture information:
[2025-06-03 06:48:04] 2025-06-03 04:46:39,404 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:48:04] 2025-06-03 04:46:39,663 | INFO     | cat /etc/os-release:
[2025-06-03 06:48:04] NAME="CentOS Linux"
[2025-06-03 06:48:04] VERSION="7 (Core)"
[2025-06-03 06:48:04] ID="centos"
[2025-06-03 06:48:04] ID_LIKE="rhel fedora"
[2025-06-03 06:48:04] VERSION_ID="7"
[2025-06-03 06:48:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:48:04] ANSI_COLOR="0;31"
[2025-06-03 06:48:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:48:04] HOME_URL="https://www.centos.org/"
[2025-06-03 06:48:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:48:04] 
[2025-06-03 06:48:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:48:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:48:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:48:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:48:04] 
[2025-06-03 06:48:04] 2025-06-03 04:46:39,664 | INFO     | **************************************
[2025-06-03 06:48:04] 2025-06-03 04:46:40,167 | INFO     | executing command: df -mP /var/lib/boinc/slots/20
[2025-06-03 06:48:04] 2025-06-03 04:46:40,416 | INFO     | sufficient remaining disk space (496951623680 B)
[2025-06-03 06:48:04] 2025-06-03 04:46:40,416 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:48:04] 2025-06-03 04:46:40,416 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:48:04] 2025-06-03 04:46:40,416 | INFO     | update_server=False
[2025-06-03 06:48:04] 2025-06-03 04:46:40,416 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:48:04] 2025-06-03 04:46:40,627 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:48:04] 2025-06-03 04:46:40,627 | INFO     | aborting loop
[2025-06-03 06:48:04] 2025-06-03 04:46:40,678 | INFO     | all job control threads have been joined
[2025-06-03 06:48:04] 2025-06-03 04:46:41,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:48:04] 2025-06-03 04:46:41,165 | INFO     | PID=26022 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 06:48:04] 2025-06-03 04:46:41,166 | INFO     | .. there are 9 such processes running
[2025-06-03 06:48:04] 2025-06-03 04:46:41,166 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:48:04] 2025-06-03 04:46:41,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:48:04] 2025-06-03 04:46:41,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:48:04] 2025-06-03 04:46:41,345 | INFO     | all payload control threads have been joined
[2025-06-03 06:48:04] 2025-06-03 04:46:41,422 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:41,471 | INFO     | all data control threads have been joined
[2025-06-03 06:48:04] 2025-06-03 04:46:41,633 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:41,678 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:41,684 | INFO     | [job] control thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:41,786 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:42,001 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:42,157 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:48:04] 2025-06-03 04:46:42,249 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:42,250 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:42,351 | INFO     | [payload] control thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:42,477 | INFO     | [data] control thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:42,589 | INFO     | [job] validate thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:42,763 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:42,982 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:43,035 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:43,163 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:43,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:48:04] 2025-06-03 04:46:47,639 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:48:04] 2025-06-03 04:46:49,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699063252800)>', '<ExcThread(monitor, started 140698498103040)>']
[2025-06-03 06:48:04] 2025-06-03 04:46:49,214 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:48:04] 2025-06-03 04:46:49,214 | INFO     | [monitor] control thread has ended
[2025-06-03 06:48:04] 2025-06-03 04:46:54,195 | INFO     | all workflow threads have been joined
[2025-06-03 06:48:04] 2025-06-03 04:46:54,195 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:48:04] 2025-06-03 04:46:54,196 | INFO     | traces error code: 0
[2025-06-03 06:48:04] 2025-06-03 04:46:54,196 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:48:04] 2025-06-03 04:46:54,568 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:48:04] 2025-06-03 04:46:54,665 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:48:04] 2025-06-03 04:46:54,763 [wrapper] pilotpid: 26022
[2025-06-03 06:48:04] 2025-06-03 04:46:54,884 [wrapper] Pilot exit status: 0
[2025-06-03 06:48:04] 2025-06-03 04:46:55,285 [wrapper] pandaids: 6677388921
[2025-06-03 06:48:04] 2025-06-03 04:46:56,121 [wrapper] cleanup supervisor_pilot  6941 26023
[2025-06-03 06:48:04] 2025-06-03 04:46:56,228 [wrapper] Test setup, not cleaning
[2025-06-03 06:48:04] 2025-06-03 04:46:56,299 [wrapper] apfmon messages muted
[2025-06-03 06:48:04] 2025-06-03 04:46:56,388 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:48:04] 2025-06-03 04:46:56,502 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:48:04]  *** Error codes and diagnostics ***
[2025-06-03 06:48:04]     "exeErrorCode": 0,
[2025-06-03 06:48:04]     "exeErrorDiag": "",
[2025-06-03 06:48:04]     "pilotErrorCode": 0,
[2025-06-03 06:48:04]     "pilotErrorDiag": "",
[2025-06-03 06:48:04]  *** Listing of results directory ***
[2025-06-03 06:48:04] total 386360
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:47 pilot3.tar.gz
[2025-06-03 06:48:04] -rwx------. 1 boinc boinc     37140 Jun  2 19:52 runpilot2-wrapper.sh
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:52 queuedata.json
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc       100 Jun  3 03:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:48:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 03:13 run_atlas
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc       105 Jun  3 03:13 job.xml
[2025-06-03 06:48:04] -rw-r--r--. 2 boinc boinc 216012776 Jun  3 03:13 EVNT.45006593._000251.pool.root.1
[2025-06-03 06:48:04] drwxrwx--x. 2 boinc boinc        68 Jun  3 03:13 shared
[2025-06-03 06:48:04] -rw-r--r--. 2 boinc boinc    508872 Jun  3 03:13 input.tar.gz
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc      6391 Jun  3 03:13 init_data.xml
[2025-06-03 06:48:04] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:13 start_atlas.sh
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc         0 Jun  3 03:13 boinc_lockfile
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc      2521 Jun  3 03:13 pandaJob.out
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc    988081 Jun  3 03:13 agis_schedconf.cvmfs.json
[2025-06-03 06:48:04] drwx------. 4 boinc boinc      4096 Jun  3 03:13 pilot3
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc 172847028 Jun  3 06:43 HITS.45006595._006259.pool.root.1
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc       531 Jun  3 06:43 boinc_task_state.xml
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc      1020 Jun  3 06:44 memory_monitor_summary.json
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc   1603667 Jun  3 06:45 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc    366691 Jun  3 06:45 log.45006595._006259.job.log.tgz.1
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc        95 Jun  3 06:46 pilot_heartbeat.json
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc      7688 Jun  3 06:46 heartbeat.json
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc      4809 Jun  3 06:46 pilotlog.txt
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc   1109507 Jun  3 06:46 log.45006595._006259.job.log.1
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc       357 Jun  3 06:46 output.list
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:46 runtime_log
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc   1495040 Jun  3 06:46 result.tar.gz
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc       656 Jun  3 06:46 TMeKDmhVOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmI3VKDmbBXLtm.diag
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc      8673 Jun  3 06:46 runtime_log.err
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:48 boinc_mmap_file
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:48 wrapper_checkpoint.txt
[2025-06-03 06:48:04] -rw-r--r--. 1 boinc boinc     20547 Jun  3 06:48 stderr.txt
[2025-06-03 06:48:04] HITS file was successfully produced:
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc 172847028 Jun  3 06:43 shared/HITS.pool.root.1
[2025-06-03 06:48:04]  *** Contents of shared directory: ***
[2025-06-03 06:48:04] total 381724
[2025-06-03 06:48:04] -rw-r--r--. 2 boinc boinc 216012776 Jun  3 03:13 ATLAS.root_0
[2025-06-03 06:48:04] -rw-r--r--. 2 boinc boinc    508872 Jun  3 03:13 input.tar.gz
[2025-06-03 06:48:04] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:13 start_atlas.sh
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc 172847028 Jun  3 06:43 HITS.pool.root.1
[2025-06-03 06:48:04] -rw-------. 1 boinc boinc   1495040 Jun  3 06:46 result.tar.gz
06:48:06 (22334): run_atlas exited; CPU time 47701.420999
06:48:06 (22334): called boinc_finish(0)

</stderr_txt>
]]>

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