Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:49:36 (21977): wrapper (7.7.26015): starting
05:49:36 (21977): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:49:36] Arguments: --nthreads 8
[2025-06-03 05:49:36] Threads: 8
[2025-06-03 05:49:36] Checking for CVMFS
[2025-06-03 05:49:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:49:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:49:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:49:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:49:38] 2.11.2.0 13438 31243 90352 146724 0 210 16035901 25165825 4635 130560 0 16998000 99.823 18174461 2119 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 05:49:38] CVMFS is ok
[2025-06-03 05:49:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:49:38] Checking for apptainer binary...
[2025-06-03 05:49:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:49:38] Running /usr/bin/apptainer --version
[2025-06-03 05:49:38] apptainer version 1.3.2-1.el7
[2025-06-03 05:49:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:49:52] cg-vwn257.simple-grid.lan
[2025-06-03 05:49:52] apptainer works
[2025-06-03 05:49:52] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:49:52] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:49:52] Starting ATLAS job with PandaID=6677388224
[2025-06-03 05:49:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 14:13:24]  *** The last 200 lines of the pilot log: ***
[2025-06-03 14:13:24] 2025-06-03 07:33:49,729 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 14:13:24] 2025-06-03 07:33:49,729 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 14:13:24] 2025-06-03 07:33:49,729 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 14:13:24] 2025-06-03 07:33:49,734 | INFO     | fitting pss+swap vs Time
[2025-06-03 14:13:24] 2025-06-03 07:33:49,735 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 14:13:24] 2025-06-03 07:33:49,750 | INFO     | sum of deviations: 17752162904.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,750 | INFO     | mean x: 1748929412.5
[2025-06-03 14:13:24] 2025-06-03 07:33:49,750 | INFO     | mean y: 2461203.542056075
[2025-06-03 14:13:24] 2025-06-03 07:33:49,751 | INFO     | -- intersect: -10214301239.762835
[2025-06-03 14:13:24] 2025-06-03 07:33:49,751 | INFO     | intersect: -10214301239.762835
[2025-06-03 14:13:24] 2025-06-03 07:33:49,751 | INFO     | chi2: 2.296448799407795
[2025-06-03 14:13:24] 2025-06-03 07:33:49,752 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,753 | INFO     | sum of deviations: 31106252586.999996
[2025-06-03 14:13:24] 2025-06-03 07:33:49,754 | INFO     | mean x: 1748929260.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,754 | INFO     | mean y: 2470794.4306220096
[2025-06-03 14:13:24] 2025-06-03 07:33:49,754 | INFO     | -- intersect: -19215724311.343033
[2025-06-03 14:13:24] 2025-06-03 07:33:49,754 | INFO     | intersect: -19215724311.343033
[2025-06-03 14:13:24] 2025-06-03 07:33:49,754 | INFO     | chi2: 1.5212931302492056
[2025-06-03 14:13:24] 2025-06-03 07:33:49,754 | INFO     | current chi2=1.5212931302492056 (change=33.75453741265581 %)
[2025-06-03 14:13:24] 2025-06-03 07:33:49,755 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,757 | INFO     | sum of deviations: 30042521624.499996
[2025-06-03 14:13:24] 2025-06-03 07:33:49,757 | INFO     | mean x: 1748929107.5
[2025-06-03 14:13:24] 2025-06-03 07:33:49,757 | INFO     | mean y: 2469976.4264705884
[2025-06-03 14:13:24] 2025-06-03 07:33:49,757 | INFO     | -- intersect: -19957050253.479095
[2025-06-03 14:13:24] 2025-06-03 07:33:49,757 | INFO     | intersect: -19957050253.479095
[2025-06-03 14:13:24] 2025-06-03 07:33:49,758 | INFO     | chi2: 1.522255870274683
[2025-06-03 14:13:24] 2025-06-03 07:33:49,758 | INFO     | current chi2=1.522255870274683 (change=-0.06328432084088495 %)
[2025-06-03 14:13:24] 2025-06-03 07:33:49,758 | INFO     | right removable region: 203
[2025-06-03 14:13:24] 2025-06-03 07:33:49,758 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,760 | INFO     | sum of deviations: -15146251444.000002
[2025-06-03 14:13:24] 2025-06-03 07:33:49,760 | INFO     | mean x: 1748929565.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,761 | INFO     | mean y: 2485075.066985646
[2025-06-03 14:13:24] 2025-06-03 07:33:49,761 | INFO     | -- intersect: 9360207138.197262
[2025-06-03 14:13:24] 2025-06-03 07:33:49,761 | INFO     | intersect: 9360207138.197262
[2025-06-03 14:13:24] 2025-06-03 07:33:49,761 | INFO     | chi2: 0.8592973786117335
[2025-06-03 14:13:24] 2025-06-03 07:33:49,761 | INFO     | current chi2=0.8592973786117335 (change=62.58147018852204 %)
[2025-06-03 14:13:24] 2025-06-03 07:33:49,762 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,763 | INFO     | sum of deviations: -13815817318.5
[2025-06-03 14:13:24] 2025-06-03 07:33:49,764 | INFO     | mean x: 1748929717.5
[2025-06-03 14:13:24] 2025-06-03 07:33:49,764 | INFO     | mean y: 2484012.3088235296
[2025-06-03 14:13:24] 2025-06-03 07:33:49,764 | INFO     | -- intersect: 9181380008.052898
[2025-06-03 14:13:24] 2025-06-03 07:33:49,764 | INFO     | intersect: 9181380008.052898
[2025-06-03 14:13:24] 2025-06-03 07:33:49,764 | INFO     | chi2: 0.8443408025351321
[2025-06-03 14:13:24] 2025-06-03 07:33:49,769 | INFO     | current chi2=0.8443408025351321 (change=1.740558792436326 %)
[2025-06-03 14:13:24] 2025-06-03 07:33:49,769 | INFO     | left removable region: 20
[2025-06-03 14:13:24] 2025-06-03 07:33:49,769 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,771 | INFO     | sum of deviations: 4950558333.999999
[2025-06-03 14:13:24] 2025-06-03 07:33:49,771 | INFO     | mean x: 1748929687.0
[2025-06-03 14:13:24] 2025-06-03 07:33:49,771 | INFO     | mean y: 2489299.4480874315
[2025-06-03 14:13:24] 2025-06-03 07:33:49,771 | INFO     | -- intersect: -4553763445.473356
[2025-06-03 14:13:24] 2025-06-03 07:33:49,771 | INFO     | intersect: -4553763445.473356
[2025-06-03 14:13:24] 2025-06-03 07:33:49,772 | INFO     | chi2: 0.0008078729035087296
[2025-06-03 14:13:24] 2025-06-03 07:33:49,772 | INFO     | -- intersect: -4553763445.473356
[2025-06-03 14:13:24] 2025-06-03 07:33:49,772 | INFO     | current memory leak: 2.61 B/s (using 183 data points, chi2=0.00)
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | ..............................
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | . Timing measurements:
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | . get job = 0 s
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | . initial setup = 8 s
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | . payload setup = 20 s
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | . stage-in = 0 s
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | . payload execution = 13032 s
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | . stage-out = 3 s
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | . log creation = 1 s
[2025-06-03 14:13:24] 2025-06-03 07:33:49,773 | INFO     | ..............................
[2025-06-03 14:13:24] 2025-06-03 07:33:50,065 | INFO     | 
[2025-06-03 14:13:24] 2025-06-03 07:33:50,065 | INFO     | job summary report
[2025-06-03 14:13:24] 2025-06-03 07:33:50,065 | INFO     | --------------------------------------------------
[2025-06-03 14:13:24] 2025-06-03 07:33:50,065 | INFO     | PanDA job id: 6677388224
[2025-06-03 14:13:24] 2025-06-03 07:33:50,065 | INFO     | task id: 45006595
[2025-06-03 14:13:24] 2025-06-03 07:33:50,065 | INFO     | errors: (none)
[2025-06-03 14:13:24] 2025-06-03 07:33:50,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 14:13:24] 2025-06-03 07:33:50,065 | INFO     | pilot state: finished 
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | transexitcode: 0
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | exeerrorcode: 0
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | exeerrordiag: 
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | exitcode: 0
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | exitmsg: OK
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | cpuconsumptiontime: 48800 s
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | nevents: 400
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | neventsw: 0
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | pid: 5401
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | pgrp: 5401
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | corecount: 8
[2025-06-03 14:13:24] 2025-06-03 07:33:50,066 | INFO     | event service: False
[2025-06-03 14:13:24] 2025-06-03 07:33:50,067 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 23: 2405233, 34: 2405261, 44: 2405289, 55: 2405445, 66: 2405473, 68: 2405707, 77: 2405735, 13057: 2435490, 13060: 2444
[2025-06-03 14:13:24] 2025-06-03 07:33:50,067 | INFO     | --------------------------------------------------
[2025-06-03 14:13:24] 2025-06-03 07:33:50,067 | INFO     | 
[2025-06-03 14:13:24] 2025-06-03 07:33:50,067 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 14:13:24] 2025-06-03 07:33:50,554 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,554 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 14:13:24] 2025-06-03 07:33:50,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 14:13:24] 2025-06-03 07:33:50,556 | INFO     | job 6677388224 has completed (purged errors)
[2025-06-03 14:13:24] 2025-06-03 07:33:50,556 | INFO     | overall cleanup function is called
[2025-06-03 14:13:24] 2025-06-03 07:33:51,565 | INFO     | --- collectZombieJob: --- 10, [5401]
[2025-06-03 14:13:24] 2025-06-03 07:33:51,565 | INFO     | zombie collector waiting for pid 5401
[2025-06-03 14:13:24] 2025-06-03 07:33:51,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 14:13:24] 2025-06-03 07:33:51,565 | INFO     | collected zombie processes
[2025-06-03 14:13:24] 2025-06-03 07:33:51,565 | INFO     | will attempt to kill all subprocesses of pid=5401
[2025-06-03 14:13:24] 2025-06-03 07:33:51,667 | INFO     | process IDs to be killed: [5401] (in reverse order)
[2025-06-03 14:13:24] 2025-06-03 07:33:52,427 | INFO     | PID=27170 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 14:13:24] 2025-06-03 07:33:52,427 | INFO     | .. there are 9 such processes running
[2025-06-03 14:13:24] 2025-06-03 07:33:52,679 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 14:13:24] 2025-06-03 07:33:52,680 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 14:13:24] 2025-06-03 07:33:52,683 | INFO     | did not find any defunct processes belonging to 5401
[2025-06-03 14:13:24] 2025-06-03 07:33:52,686 | INFO     | did not find any defunct processes belonging to 5401
[2025-06-03 14:13:24] 2025-06-03 07:33:52,687 | INFO     | ready for new job
[2025-06-03 14:13:24] 2025-06-03 07:33:52,687 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 14:13:24] 2025-06-03 07:33:52,689 | INFO     | **************************************
[2025-06-03 14:13:24] 2025-06-03 07:33:52,689 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 14:13:24] 2025-06-03 07:33:52,689 | INFO     | **************************************
[2025-06-03 14:13:24] 2025-06-03 07:33:52,689 | INFO     | 
[2025-06-03 14:13:24] 2025-06-03 07:33:52,690 | INFO     | pilot is running in a VM
[2025-06-03 14:13:24] 2025-06-03 07:33:52,690 | INFO     | architecture information:
[2025-06-03 14:13:24] 2025-06-03 07:33:52,703 | INFO     | executing command: cat /etc/os-release
[2025-06-03 14:13:24] 2025-06-03 07:33:52,890 | INFO     | cat /etc/os-release:
[2025-06-03 14:13:24] NAME="CentOS Linux"
[2025-06-03 14:13:24] VERSION="7 (Core)"
[2025-06-03 14:13:24] ID="centos"
[2025-06-03 14:13:24] ID_LIKE="rhel fedora"
[2025-06-03 14:13:24] VERSION_ID="7"
[2025-06-03 14:13:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 14:13:24] ANSI_COLOR="0;31"
[2025-06-03 14:13:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 14:13:24] HOME_URL="https://www.centos.org/"
[2025-06-03 14:13:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 14:13:24] 
[2025-06-03 14:13:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 14:13:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 14:13:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 14:13:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 14:13:24] 
[2025-06-03 14:13:24] 2025-06-03 07:33:52,891 | INFO     | **************************************
[2025-06-03 14:13:24] 2025-06-03 07:33:53,393 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 14:13:24] 2025-06-03 07:33:53,683 | INFO     | sufficient remaining disk space (497035509760 B)
[2025-06-03 14:13:24] 2025-06-03 07:33:53,684 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 14:13:24] 2025-06-03 07:33:53,684 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 14:13:24] 2025-06-03 07:33:53,684 | INFO     | update_server=False
[2025-06-03 14:13:24] 2025-06-03 07:33:53,684 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 14:13:24] 2025-06-03 07:33:53,686 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 14:13:24] 2025-06-03 07:33:53,813 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 14:13:24] 2025-06-03 07:33:53,850 | INFO     | all payload control threads have been joined
[2025-06-03 14:13:24] 2025-06-03 07:33:54,433 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 14:13:24] 2025-06-03 07:33:54,433 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 14:13:24] 2025-06-03 07:33:54,433 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 14:13:24] 2025-06-03 07:33:54,489 | INFO     | all data control threads have been joined
[2025-06-03 14:13:24] 2025-06-03 07:33:54,598 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:13:24] 2025-06-03 07:33:54,598 | INFO     | aborting loop
[2025-06-03 14:13:24] 2025-06-03 07:33:54,690 | INFO     | [job] retrieve thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:54,822 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:54,856 | INFO     | [payload] control thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:54,920 | INFO     | all job control threads have been joined
[2025-06-03 14:13:24] 2025-06-03 07:33:54,966 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 14:13:24] 2025-06-03 07:33:54,982 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,340 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,494 | INFO     | [data] control thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,604 | INFO     | [job] job monitor thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,611 | INFO     | [data] copytool_in thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,725 | INFO     | [payload] validate_post thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,757 | INFO     | [payload] failed_post thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,819 | INFO     | [data] copytool_out thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,925 | INFO     | [job] control thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:55,972 | INFO     | [job] queue monitor thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:56,138 | INFO     | [job] validate thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:33:57,695 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:34:04,603 | INFO     | job.realtimelogging is not enabled
[2025-06-03 14:13:24] 2025-06-03 07:34:05,609 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 14:13:24] 2025-06-03 07:34:06,655 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140356957562688)>', '<ExcThread(monitor, started 140356662302464)>']
[2025-06-03 14:13:24] 2025-06-03 07:34:07,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 14:13:24] 2025-06-03 07:34:07,512 | INFO     | [monitor] control thread has ended
[2025-06-03 14:13:24] 2025-06-03 07:34:11,681 | INFO     | all workflow threads have been joined
[2025-06-03 14:13:24] 2025-06-03 07:34:11,681 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 14:13:24] 2025-06-03 07:34:11,681 | INFO     | traces error code: 0
[2025-06-03 14:13:24] 2025-06-03 07:34:11,681 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 14:13:24] 2025-06-03 07:34:11,985 [wrapper] ==== pilot stdout END ====
[2025-06-03 14:13:24] 2025-06-03 07:34:12,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 14:13:24] 2025-06-03 07:34:12,173 [wrapper] pilotpid: 27170
[2025-06-03 14:13:24] 2025-06-03 07:34:12,287 [wrapper] Pilot exit status: 0
[2025-06-03 14:13:24] 2025-06-03 07:34:12,680 [wrapper] pandaids: 6677388224
[2025-06-03 14:13:24] 2025-06-03 07:34:13,720 [wrapper] cleanup supervisor_pilot 22829 27171
[2025-06-03 14:13:24] 2025-06-03 07:34:13,820 [wrapper] Test setup, not cleaning
[2025-06-03 14:13:24] 2025-06-03 07:34:13,939 [wrapper] apfmon messages muted
[2025-06-03 14:13:24] 2025-06-03 07:34:14,005 [wrapper] ==== wrapper stdout END ====
[2025-06-03 14:13:24] 2025-06-03 07:34:14,104 [wrapper] ==== wrapper stderr END ====
[2025-06-03 14:13:24]  *** Error codes and diagnostics ***
[2025-06-03 14:13:24]     "exeErrorCode": 0,
[2025-06-03 14:13:24]     "exeErrorDiag": "",
[2025-06-03 14:13:24]     "pilotErrorCode": 0,
[2025-06-03 14:13:24]     "pilotErrorDiag": "",
[2025-06-03 14:13:24]  *** Listing of results directory ***
[2025-06-03 14:13:24] total 391328
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 14:13:24] -rwx------. 1 boinc boinc     37140 Jun  2 19:33 runpilot2-wrapper.sh
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:33 queuedata.json
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc       100 Jun  3 05:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 14:13:24] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 05:49 run_atlas
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc       105 Jun  3 05:49 job.xml
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc      6389 Jun  3 05:49 init_data.xml
[2025-06-03 14:13:24] -rw-r--r--. 2 boinc boinc 215604336 Jun  3 05:49 EVNT.45006593._000234.pool.root.1
[2025-06-03 14:13:24] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:49 start_atlas.sh
[2025-06-03 14:13:24] drwxrwx--x. 2 boinc boinc        68 Jun  3 05:49 shared
[2025-06-03 14:13:24] -rw-r--r--. 2 boinc boinc    508871 Jun  3 05:49 input.tar.gz
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc         0 Jun  3 05:49 boinc_lockfile
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc      2521 Jun  3 05:49 pandaJob.out
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc    988073 Jun  3 05:53 agis_schedconf.cvmfs.json
[2025-06-03 14:13:24] drwx------. 4 boinc boinc      4096 Jun  3 05:53 pilot3
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc 178218934 Jun  3 09:30 HITS.45006595._005852.pool.root.1
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc       531 Jun  3 09:30 boinc_task_state.xml
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc      1017 Jun  3 09:32 memory_monitor_summary.json
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc   1603667 Jun  3 09:32 agis_ddmendpoints.agis.ALL.json
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc    392226 Jun  3 09:32 log.45006595._005852.job.log.tgz.1
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc        95 Jun  3 09:33 pilot_heartbeat.json
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc      7696 Jun  3 09:33 heartbeat.json
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc      4488 Jun  3 09:34 pilotlog.txt
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc   1143727 Jun  3 09:34 log.45006595._005852.job.log.1
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc       357 Jun  3 09:34 output.list
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc       620 Jun  3 09:34 runtime_log
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc   1556480 Jun  3 09:34 result.tar.gz
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc       656 Jun  3 09:34 XOdNDm5COg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmVyVKDmBjtaXm.diag
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc      8659 Jun  3 09:34 runtime_log.err
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc        28 Jun  3 14:13 wrapper_checkpoint.txt
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc      8192 Jun  3 14:13 boinc_mmap_file
[2025-06-03 14:13:24] -rw-r--r--. 1 boinc boinc     20575 Jun  3 14:13 stderr.txt
[2025-06-03 14:13:24] HITS file was successfully produced:
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc 178218934 Jun  3 09:30 shared/HITS.pool.root.1
[2025-06-03 14:13:24]  *** Contents of shared directory: ***
[2025-06-03 14:13:24] total 386632
[2025-06-03 14:13:24] -rw-r--r--. 2 boinc boinc 215604336 Jun  3 05:49 ATLAS.root_0
[2025-06-03 14:13:24] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:49 start_atlas.sh
[2025-06-03 14:13:24] -rw-r--r--. 2 boinc boinc    508871 Jun  3 05:49 input.tar.gz
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc 178218934 Jun  3 09:30 HITS.pool.root.1
[2025-06-03 14:13:24] -rw-------. 1 boinc boinc   1556480 Jun  3 09:34 result.tar.gz
14:13:26 (21977): run_atlas exited; CPU time 48965.098940
14:13:26 (21977): called boinc_finish(0)

</stderr_txt>
]]>

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