Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:11:39 (3061099): wrapper (7.7.26015): starting
16:11:39 (3061099): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 16:11:39] Arguments: --nthreads 8
[2025-06-02 16:11:39] Threads: 8
[2025-06-02 16:11:39] Checking for CVMFS
[2025-06-02 16:11:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 16:11:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 16:11:40] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 16:11:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 16:11:41] 2.12.6.0 7828 34893 388648 146717 0 510 26025651 32935937 11141 16776704 0 287662325 99.647 258102460 21522 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 16:11:41] CVMFS is ok
[2025-06-02 16:11:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 16:11:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 16:11:41] Further information can be found at the LHC@home message board.
[2025-06-02 16:11:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 16:11:41] Checking for apptainer binary...
[2025-06-02 16:11:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 16:11:41] Running /usr/bin/apptainer --version
[2025-06-02 16:11:41] apptainer version 1.4.1-1.el9
[2025-06-02 16:11:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 16:11:41] c7-3-29.aglt2.org
[2025-06-02 16:11:41] apptainer works
[2025-06-02 16:11:41] Set ATHENA_PROC_NUMBER=8
[2025-06-02 16:11:41] Set ATHENA_CORE_NUMBER=8
[2025-06-02 16:11:41] Starting ATLAS job with PandaID=6677385712
[2025-06-02 16:11:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 17:33:34]  *** The last 200 lines of the pilot log: ***
[2025-06-02 17:33:34]  guid=6678920e-de93-4540-be34-8779745bb8bb
[2025-06-02 17:33:34]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-02 17:33:34]  is_altstaged=None
[2025-06-02 17:33:34]  is_tar=False
[2025-06-02 17:33:34]  lfn=log.45006595._004519.job.log.tgz.1
[2025-06-02 17:33:34]  mtime=0
[2025-06-02 17:33:34]  protocol_id=None
[2025-06-02 17:33:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 17:33:34]  replicas=None
[2025-06-02 17:33:34]  scope=mc23_13p6TeV
[2025-06-02 17:33:34]  status=None
[2025-06-02 17:33:34]  status_code=0
[2025-06-02 17:33:34]  storage_token=
[2025-06-02 17:33:34]  surl=/tmp/boinchome/slots/11/PanDA_Pilot-6677385712/log.45006595._004519.job.log.tgz.1
[2025-06-02 17:33:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/38/log.45006595._004519.job.log.tgz.1
[2025-06-02 17:33:34]  workdir=None
[2025-06-02 17:33:34] ]
[2025-06-02 17:33:34] 2025-06-02 21:33:07,389 | INFO     | transferring file log.45006595._004519.job.log.tgz.1 from /tmp/boinchome/slots/11/PanDA_Pilot-6677385712/log.45006595._004519.job.log.tgz.1 to /tmp/boinchome/slots
[2025-06-02 17:33:34] 2025-06-02 21:33:07,389 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/11/PanDA_Pilot-6677385712/log.45006595._004519.job.log.tgz.1 /tmp/boinchome/slots/11/log.45006595._004519.j
[2025-06-02 17:33:34] 2025-06-02 21:33:07,410 | INFO     | adding to output.list: log.45006595._004519.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/61/38/log.45006595._004519.job.log.tg
[2025-06-02 17:33:34] 2025-06-02 21:33:07,411 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 17:33:34] 2025-06-02 21:33:07,411 | INFO     | summary of transferred files:
[2025-06-02 17:33:34] 2025-06-02 21:33:07,411 | INFO     |  -- lfn=log.45006595._004519.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 17:33:34] 2025-06-02 21:33:07,412 | INFO     | stage-out finished correctly
[2025-06-02 17:33:34] 2025-06-02 21:33:09,365 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 17:33:34] 2025-06-02 21:33:09,441 | INFO     | job 6677385712 has state=finished
[2025-06-02 17:33:34] 2025-06-02 21:33:09,442 | INFO     | preparing for final server update for job 6677385712 in state='finished'
[2025-06-02 17:33:34] 2025-06-02 21:33:09,442 | INFO     | this job has now completed (state=finished)
[2025-06-02 17:33:34] 2025-06-02 21:33:09,443 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 17:33:34] 2025-06-02 21:33:09,443 | INFO     | log transfer has been attempted: DONE
[2025-06-02 17:33:34] 2025-06-02 21:33:09,443 | INFO     | job 6677385712 has finished - writing final server update
[2025-06-02 17:33:34] 2025-06-02 21:33:09,444 | INFO     | total number of processed events: 400 (read)
[2025-06-02 17:33:34] 2025-06-02 21:33:09,467 | INFO     | executing command: lscpu
[2025-06-02 17:33:34] 2025-06-02 21:33:09,556 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 17:33:34] 2025-06-02 21:33:09,786 | INFO     | monitor loop #355: job 0:6677385712 is in state 'finished'
[2025-06-02 17:33:34] 2025-06-02 21:33:09,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 17:33:34] 2025-06-02 21:33:12,291 | INFO     | monitor loop #356: job 0:6677385712 is in state 'finished'
[2025-06-02 17:33:34] 2025-06-02 21:33:12,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-02 17:33:34] 2025-06-02 21:33:14,267 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 17:33:34] 2025-06-02 21:33:14,267 | INFO     | using path: /tmp/boinchome/slots/11/PanDA_Pilot-6677385712/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 17:33:34] 2025-06-02 21:33:14,269 | INFO     | extracted standard info from prmon json
[2025-06-02 17:33:34] 2025-06-02 21:33:14,269 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:33:34] 2025-06-02 21:33:14,269 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:33:34] 2025-06-02 21:33:14,270 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:33:34] 2025-06-02 21:33:14,270 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:33:34] 2025-06-02 21:33:14,272 | INFO     | fitting pss+swap vs Time
[2025-06-02 17:33:34] 2025-06-02 21:33:14,272 | INFO     | sum of square deviations: 110958268.98591547
[2025-06-02 17:33:34] 2025-06-02 21:33:14,272 | INFO     | sum of deviations: 1845916663.7887325
[2025-06-02 17:33:34] 2025-06-02 21:33:14,272 | INFO     | mean x: 1748897708.0140846
[2025-06-02 17:33:34] 2025-06-02 21:33:14,273 | INFO     | mean y: 2221510.2112676054
[2025-06-02 17:33:34] 2025-06-02 21:33:14,273 | INFO     | -- intersect: -29092675625.34974
[2025-06-02 17:33:34] 2025-06-02 21:33:14,273 | INFO     | intersect: -29092675625.34974
[2025-06-02 17:33:34] 2025-06-02 21:33:14,273 | INFO     | chi2: 0.0479369312876854
[2025-06-02 17:33:34] 2025-06-02 21:33:14,273 | INFO     | -- intersect: -29092675625.34974
[2025-06-02 17:33:34] 2025-06-02 21:33:14,273 | INFO     | current memory leak: 16.64 B/s (using 71 data points, chi2=0.05)
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | ..............................
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | . Timing measurements:
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | . get job = 0 s
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | . initial setup = 3 s
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | . payload setup = 36 s
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | . stage-in = 0 s
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | . payload execution = 4737 s
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | . stage-out = 0 s
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | . log creation = 0 s
[2025-06-02 17:33:34] 2025-06-02 21:33:14,274 | INFO     | ..............................
[2025-06-02 17:33:34] 2025-06-02 21:33:14,362 | INFO     | 
[2025-06-02 17:33:34] 2025-06-02 21:33:14,362 | INFO     | job summary report
[2025-06-02 17:33:34] 2025-06-02 21:33:14,362 | INFO     | --------------------------------------------------
[2025-06-02 17:33:34] 2025-06-02 21:33:14,362 | INFO     | PanDA job id: 6677385712
[2025-06-02 17:33:34] 2025-06-02 21:33:14,362 | INFO     | task id: 45006595
[2025-06-02 17:33:34] 2025-06-02 21:33:14,362 | INFO     | errors: (none)
[2025-06-02 17:33:34] 2025-06-02 21:33:14,362 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 17:33:34] 2025-06-02 21:33:14,362 | INFO     | pilot state: finished 
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | transexitcode: 0
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | exeerrorcode: 0
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | exeerrordiag: 
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | exitcode: 0
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | exitmsg: OK
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | cpuconsumptiontime: 27716 s
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | nevents: 400
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | neventsw: 0
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | pid: 3119351
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | pgrp: 3119351
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | corecount: 8
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | event service: False
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | sizes: {0: 2405007, 1: 2405206, 12: 2405206, 22: 2405234, 24: 2405468, 33: 2405496, 4777: 2431684, 4779: 2440627, 4781: 2440683, 4786: 2440853}
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | --------------------------------------------------
[2025-06-02 17:33:34] 2025-06-02 21:33:14,363 | INFO     | 
[2025-06-02 17:33:34] 2025-06-02 21:33:14,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/11
[2025-06-02 17:33:34] 2025-06-02 21:33:14,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,397 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,397 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,397 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,397 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,397 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,398 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 17:33:34] 2025-06-02 21:33:14,399 | INFO     | job 6677385712 has completed (purged errors)
[2025-06-02 17:33:34] 2025-06-02 21:33:14,399 | INFO     | overall cleanup function is called
[2025-06-02 17:33:34] 2025-06-02 21:33:15,407 | INFO     | --- collectZombieJob: --- 10, [3119351]
[2025-06-02 17:33:34] 2025-06-02 21:33:15,407 | INFO     | zombie collector waiting for pid 3119351
[2025-06-02 17:33:34] 2025-06-02 21:33:15,407 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 17:33:34] 2025-06-02 21:33:15,407 | INFO     | collected zombie processes
[2025-06-02 17:33:34] 2025-06-02 21:33:15,407 | INFO     | will attempt to kill all subprocesses of pid=3119351
[2025-06-02 17:33:34] 2025-06-02 21:33:15,798 | INFO     | process IDs to be killed: [3119351] (in reverse order)
[2025-06-02 17:33:34] 2025-06-02 21:33:15,948 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 17:33:34] 2025-06-02 21:33:15,948 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 17:33:34] 2025-06-02 21:33:15,965 | INFO     | did not find any defunct processes belonging to 3119351
[2025-06-02 17:33:34] 2025-06-02 21:33:15,979 | INFO     | did not find any defunct processes belonging to 3119351
[2025-06-02 17:33:34] 2025-06-02 21:33:15,979 | INFO     | ready for new job
[2025-06-02 17:33:34] 2025-06-02 21:33:15,979 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 17:33:34] 2025-06-02 21:33:15,980 | INFO     | **************************************
[2025-06-02 17:33:34] 2025-06-02 21:33:15,980 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 17:33:34] 2025-06-02 21:33:15,980 | INFO     | **************************************
[2025-06-02 17:33:34] 2025-06-02 21:33:15,980 | INFO     | 
[2025-06-02 17:33:34] 2025-06-02 21:33:15,985 | INFO     | architecture information:
[2025-06-02 17:33:34] 2025-06-02 21:33:15,986 | INFO     | executing command: cat /etc/os-release
[2025-06-02 17:33:34] 2025-06-02 21:33:16,011 | INFO     | cat /etc/os-release:
[2025-06-02 17:33:34] NAME="CentOS Linux"
[2025-06-02 17:33:34] VERSION="7 (Core)"
[2025-06-02 17:33:34] ID="centos"
[2025-06-02 17:33:34] ID_LIKE="rhel fedora"
[2025-06-02 17:33:34] VERSION_ID="7"
[2025-06-02 17:33:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 17:33:34] ANSI_COLOR="0;31"
[2025-06-02 17:33:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 17:33:34] HOME_URL="https://www.centos.org/"
[2025-06-02 17:33:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 17:33:34] 
[2025-06-02 17:33:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 17:33:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 17:33:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 17:33:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 17:33:34] 
[2025-06-02 17:33:34] 2025-06-02 21:33:16,011 | INFO     | **************************************
[2025-06-02 17:33:34] 2025-06-02 21:33:16,515 | INFO     | executing command: df -mP /tmp/boinchome/slots/11
[2025-06-02 17:33:34] 2025-06-02 21:33:16,539 | INFO     | sufficient remaining disk space (70185385984 B)
[2025-06-02 17:33:34] 2025-06-02 21:33:16,539 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 17:33:34] 2025-06-02 21:33:16,539 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 17:33:34] 2025-06-02 21:33:16,539 | INFO     | update_server=False
[2025-06-02 17:33:34] 2025-06-02 21:33:16,539 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 17:33:34] 2025-06-02 21:33:16,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:33:34] 2025-06-02 21:33:16,540 | INFO     | aborting loop
[2025-06-02 17:33:34] 2025-06-02 21:33:16,845 | INFO     | all data control threads have been joined
[2025-06-02 17:33:34] 2025-06-02 21:33:17,348 | INFO     | all payload control threads have been joined
[2025-06-02 17:33:34] 2025-06-02 21:33:17,367 | INFO     | all job control threads have been joined
[2025-06-02 17:33:34] 2025-06-02 21:33:17,545 | INFO     | [job] retrieve thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:17,550 | INFO     | [job] job monitor thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:17,766 | INFO     | PID=3078061 has CPU usage=13.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-02 17:33:34] 2025-06-02 21:33:17,766 | INFO     | .. there are 16 such processes running
[2025-06-02 17:33:34] 2025-06-02 21:33:17,766 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 17:33:34] 2025-06-02 21:33:17,766 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 17:33:34] 2025-06-02 21:33:17,766 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 17:33:34] 2025-06-02 21:33:17,778 | INFO     | [payload] validate_post thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:17,851 | INFO     | [data] control thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:17,941 | INFO     | [data] copytool_in thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:18,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 17:33:34] 2025-06-02 21:33:18,153 | INFO     | [job] validate thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:18,296 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:18,354 | INFO     | [payload] control thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:18,373 | INFO     | [job] control thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:18,391 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:18,979 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:19,097 | INFO     | [payload] failed_post thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:19,374 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:33:34] 2025-06-02 21:33:19,954 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 17:33:34] 2025-06-02 21:33:20,006 | INFO     | [data] copytool_out thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:20,379 | INFO     | [job] queue monitor thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:23,963 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:27,079 | INFO     | job.realtimelogging is not enabled
[2025-06-02 17:33:34] 2025-06-02 21:33:28,086 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 17:33:34] 2025-06-02 21:33:28,969 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384806602560)>', '<ExcThread(monitor, started 140384445372160)>']
[2025-06-02 17:33:34] 2025-06-02 21:33:29,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 17:33:34] 2025-06-02 21:33:29,833 | INFO     | [monitor] control thread has ended
[2025-06-02 17:33:34] 2025-06-02 21:33:33,996 | INFO     | all workflow threads have been joined
[2025-06-02 17:33:34] 2025-06-02 21:33:33,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 17:33:34] 2025-06-02 21:33:33,996 | INFO     | traces error code: 0
[2025-06-02 17:33:34] 2025-06-02 21:33:33,996 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 17:33:34] 2025-06-02 21:33:34,100 [wrapper] ==== pilot stdout END ====
[2025-06-02 17:33:34] 2025-06-02 21:33:34,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 17:33:34] 2025-06-02 21:33:34,106 [wrapper] pilotpid: 3078061
[2025-06-02 17:33:34] 2025-06-02 21:33:34,110 [wrapper] Pilot exit status: 0
[2025-06-02 17:33:34] 2025-06-02 21:33:34,124 [wrapper] pandaids: 6677385712
[2025-06-02 17:33:34] 2025-06-02 21:33:34,219 [wrapper] cleanup supervisor_pilot 3432590 3078062
[2025-06-02 17:33:34] 2025-06-02 21:33:34,223 [wrapper] Test setup, not cleaning
[2025-06-02 17:33:34] 2025-06-02 21:33:34,227 [wrapper] apfmon messages muted
[2025-06-02 17:33:34] 2025-06-02 21:33:34,230 [wrapper] ==== wrapper stdout END ====
[2025-06-02 17:33:34] 2025-06-02 21:33:34,233 [wrapper] ==== wrapper stderr END ====
[2025-06-02 17:33:34]  *** Error codes and diagnostics ***
[2025-06-02 17:33:34]     "exeErrorCode": 0,
[2025-06-02 17:33:34]     "exeErrorDiag": "",
[2025-06-02 17:33:34]     "pilotErrorCode": 0,
[2025-06-02 17:33:34]     "pilotErrorDiag": "",
[2025-06-02 17:33:34]  *** Listing of results directory ***
[2025-06-02 17:33:34] total 394124
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 12:40 pilot3.tar.gz
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 12:55 queuedata.json
[2025-06-02 17:33:34] -rwx------. 1 boincer umatlas     37140 Jun  2 12:56 runpilot2-wrapper.sh
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas       100 Jun  2 16:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 17:33:34] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 16:11 run_atlas
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas       105 Jun  2 16:11 job.xml
[2025-06-02 17:33:34] -rw-r--r--. 2 boincer umatlas 216707056 Jun  2 16:11 EVNT.45006593._000181.pool.root.1
[2025-06-02 17:33:34] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 16:11 shared
[2025-06-02 17:33:34] -rw-r--r--. 2 boincer umatlas    508877 Jun  2 16:11 input.tar.gz
[2025-06-02 17:33:34] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 16:11 start_atlas.sh
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas         0 Jun  2 16:11 boinc_lockfile
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas      2521 Jun  2 16:11 pandaJob.out
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas    988356 Jun  2 16:12 agis_schedconf.cvmfs.json
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas   1603667 Jun  2 16:12 agis_ddmendpoints.agis.ALL.json
[2025-06-02 17:33:34] drwx------. 4 boincer umatlas      4096 Jun  2 16:12 pilot3
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas      6936 Jun  2 17:30 init_data.xml
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas 181486254 Jun  2 17:32 HITS.45006595._004519.pool.root.1
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas       530 Jun  2 17:32 boinc_task_state.xml
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas        95 Jun  2 17:32 pilot_heartbeat.json
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas      1026 Jun  2 17:33 memory_monitor_summary.json
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas    312894 Jun  2 17:33 log.45006595._004519.job.log.tgz.1
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas      7679 Jun  2 17:33 heartbeat.json
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 17:33 boinc_mmap_file
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas        27 Jun  2 17:33 wrapper_checkpoint.txt
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas      4822 Jun  2 17:33 pilotlog.txt
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas    462374 Jun  2 17:33 log.45006595._004519.job.log.1
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas       357 Jun  2 17:33 output.list
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas       620 Jun  2 17:33 runtime_log
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas    798720 Jun  2 17:33 result.tar.gz
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas      8668 Jun  2 17:33 runtime_log.err
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas       651 Jun  2 17:33 nthKDmidNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmnZfKDmKVH2Nn.diag
[2025-06-02 17:33:34] -rw-r--r--. 1 boincer umatlas     21407 Jun  2 17:33 stderr.txt
[2025-06-02 17:33:34] HITS file was successfully produced:
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas 181486254 Jun  2 17:32 shared/HITS.pool.root.1
[2025-06-02 17:33:34]  *** Contents of shared directory: ***
[2025-06-02 17:33:34] total 390164
[2025-06-02 17:33:34] -rw-r--r--. 2 boincer umatlas 216707056 Jun  2 16:11 ATLAS.root_0
[2025-06-02 17:33:34] -rw-r--r--. 2 boincer umatlas    508877 Jun  2 16:11 input.tar.gz
[2025-06-02 17:33:34] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 16:11 start_atlas.sh
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas 181486254 Jun  2 17:32 HITS.pool.root.1
[2025-06-02 17:33:34] -rw-------. 1 boincer umatlas    798720 Jun  2 17:33 result.tar.gz
17:33:36 (3061099): run_atlas exited; CPU time 27873.388595
17:33:36 (3061099): called boinc_finish(0)

</stderr_txt>
]]>

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