Stderr output

<core_client_version>8.0.4</core_client_version>
<![CDATA[
<stderr_txt>
23:04:41 (3968494): wrapper (7.7.26015): starting
23:04:41 (3968494): wrapper: running run_atlas (--nthreads 4)
[2025-06-02 23:04:41] Arguments: --nthreads 4
[2025-06-02 23:04:41] Threads: 4
[2025-06-02 23:04:41] Checking for CVMFS
[2025-06-02 23:04:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:04:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:04:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:04:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:04:42] 2.9.2.0 3943357 63 50536 146718 0 56 30301913 36864000 0 130560 0 66622 99.974 71456 63291 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-06-02 23:04:42] CVMFS is ok
[2025-06-02 23:04:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 23:04:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 23:04:42] Further information can be found at the LHC@home message board.
[2025-06-02 23:04:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:04:42] Checking for apptainer binary...
[2025-06-02 23:04:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:04:42] Running /usr/bin/apptainer --version
[2025-06-02 23:04:42] apptainer version 1.3.6-6.1
[2025-06-02 23:04:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:04:42] thA319a
[2025-06-02 23:04:42] apptainer works
[2025-06-02 23:04:42] Set ATHENA_PROC_NUMBER=4
[2025-06-02 23:04:42] Set ATHENA_CORE_NUMBER=4
[2025-06-02 23:04:42] Starting ATLAS job with PandaID=6677383183
[2025-06-02 23:04:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 00:07:45]  *** The last 200 lines of the pilot log: ***
[2025-06-03 00:07:45]  filetype=log
[2025-06-03 00:07:45]  guid=6203f873-c01b-4ec0-afaf-bfb1f1b2b270
[2025-06-03 00:07:45]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-03 00:07:45]  is_altstaged=None
[2025-06-03 00:07:45]  is_tar=False
[2025-06-03 00:07:45]  lfn=log.45006595._003447.job.log.tgz.1
[2025-06-03 00:07:45]  mtime=0
[2025-06-03 00:07:45]  protocol_id=None
[2025-06-03 00:07:45]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-03 00:07:45]  replicas=None
[2025-06-03 00:07:45]  scope=mc23_13p6TeV
[2025-06-03 00:07:45]  status=None
[2025-06-03 00:07:45]  status_code=0
[2025-06-03 00:07:45]  storage_token=
[2025-06-03 00:07:45]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6677383183/log.45006595._003447.job.log.tgz.1
[2025-06-03 00:07:45]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/c0/log.45006595._003447.job.log.tgz.1
[2025-06-03 00:07:45]  workdir=None
[2025-06-03 00:07:45] ]
[2025-06-03 00:07:45] 2025-06-02 22:07:28,306 | INFO     | transferring file log.45006595._003447.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6677383183/log.45006595._003447.job.log.tgz.1 to /local/data/boinc/
[2025-06-03 00:07:45] 2025-06-02 22:07:28,306 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6677383183/log.45006595._003447.job.log.tgz.1 /local/data/boinc/slots/0/log.45006595._0034
[2025-06-03 00:07:45] 2025-06-02 22:07:28,325 | INFO     | adding to output.list: log.45006595._003447.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/c0/log.45006595._003447.job.log.tg
[2025-06-03 00:07:45] 2025-06-02 22:07:28,326 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 00:07:45] 2025-06-02 22:07:28,326 | INFO     | summary of transferred files:
[2025-06-03 00:07:45] 2025-06-02 22:07:28,326 | INFO     |  -- lfn=log.45006595._003447.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 00:07:45] 2025-06-02 22:07:28,326 | INFO     | stage-out finished correctly
[2025-06-03 00:07:45] 2025-06-02 22:07:28,366 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 00:07:45] 2025-06-02 22:07:29,316 | INFO     | job 6677383183 has state=finished
[2025-06-03 00:07:45] 2025-06-02 22:07:29,317 | INFO     | preparing for final server update for job 6677383183 in state='finished'
[2025-06-03 00:07:45] 2025-06-02 22:07:29,317 | INFO     | this job has now completed (state=finished)
[2025-06-03 00:07:45] 2025-06-02 22:07:29,317 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 00:07:45] 2025-06-02 22:07:29,317 | INFO     | log transfer has been attempted: DONE
[2025-06-03 00:07:45] 2025-06-02 22:07:29,317 | INFO     | job 6677383183 has finished - writing final server update
[2025-06-03 00:07:45] 2025-06-02 22:07:29,317 | INFO     | total number of processed events: 400 (read)
[2025-06-03 00:07:45] 2025-06-02 22:07:29,319 | INFO     | executing command: lscpu
[2025-06-03 00:07:45] 2025-06-02 22:07:29,341 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 00:07:45] 2025-06-02 22:07:29,857 | INFO     | PID=3972194 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-03 00:07:45] 2025-06-02 22:07:32,488 | WARNING  | process 3978825 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 00:07:45] 2025-06-02 22:07:32,488 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677383183/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 00:07:45] 2025-06-02 22:07:32,530 | INFO     | number of running child processes to parent process 3978825: 1
[2025-06-03 00:07:45] 2025-06-02 22:07:32,530 | INFO     | maximum number of monitored processes: 6
[2025-06-03 00:07:45] 2025-06-02 22:07:32,824 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 00:07:45] 2025-06-02 22:07:32,824 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6677383183/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 00:07:45] 2025-06-02 22:07:32,824 | INFO     | extracted standard info from prmon json
[2025-06-03 00:07:45] 2025-06-02 22:07:32,824 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 00:07:45] 2025-06-02 22:07:32,824 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 00:07:45] 2025-06-02 22:07:32,824 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 00:07:45] 2025-06-02 22:07:32,824 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:07:45] 2025-06-02 22:07:32,825 | INFO     | fitting pss+swap vs Time
[2025-06-03 00:07:45] 2025-06-02 22:07:32,825 | INFO     | sum of square deviations: 51573060.0
[2025-06-03 00:07:45] 2025-06-02 22:07:32,825 | INFO     | sum of deviations: 212982719.99999997
[2025-06-03 00:07:45] 2025-06-02 22:07:32,825 | INFO     | mean x: 1748900266.0
[2025-06-03 00:07:45] 2025-06-02 22:07:32,825 | INFO     | mean y: 2677694.309090909
[2025-06-03 00:07:45] 2025-06-02 22:07:32,825 | INFO     | -- intersect: -7219805044.962215
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | intersect: -7219805044.962215
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | chi2: 0.0005983645193737849
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | -- intersect: -7219805044.962215
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | current memory leak: 4.13 B/s (using 55 data points, chi2=0.00)
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | ..............................
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | . Timing measurements:
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | . get job = 0 s
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | . initial setup = 1 s
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | . payload setup = 5 s
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | . stage-in = 0 s
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | . payload execution = 3734 s
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | . stage-out = 0 s
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | . log creation = 0 s
[2025-06-03 00:07:45] 2025-06-02 22:07:32,826 | INFO     | ..............................
[2025-06-03 00:07:45] 2025-06-02 22:07:32,867 | INFO     | 
[2025-06-03 00:07:45] 2025-06-02 22:07:32,867 | INFO     | job summary report
[2025-06-03 00:07:45] 2025-06-02 22:07:32,867 | INFO     | --------------------------------------------------
[2025-06-03 00:07:45] 2025-06-02 22:07:32,867 | INFO     | PanDA job id: 6677383183
[2025-06-03 00:07:45] 2025-06-02 22:07:32,867 | INFO     | task id: 45006595
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | errors: (none)
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | pilot state: finished 
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | transexitcode: 0
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | exeerrorcode: 0
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | exeerrordiag: 
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | exitcode: 0
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | exitmsg: OK
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | cpuconsumptiontime: 14055 s
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | nevents: 400
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | neventsw: 0
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | pid: 3978825
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | pgrp: 3978825
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | corecount: 4
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | event service: False
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | sizes: {0: 2405180, 4: 2405386, 11: 2405414, 3743: 2431176, 3744: 2440178, 3749: 2440292}
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | --------------------------------------------------
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | 
[2025-06-03 00:07:45] 2025-06-02 22:07:32,868 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,887 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 00:07:45] 2025-06-02 22:07:32,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 00:07:45] 2025-06-02 22:07:32,888 | INFO     | job 6677383183 has completed (purged errors)
[2025-06-03 00:07:45] 2025-06-02 22:07:32,888 | INFO     | overall cleanup function is called
[2025-06-03 00:07:45] 2025-06-02 22:07:33,895 | INFO     | --- collectZombieJob: --- 10, [3978825]
[2025-06-03 00:07:45] 2025-06-02 22:07:33,895 | INFO     | zombie collector waiting for pid 3978825
[2025-06-03 00:07:45] 2025-06-02 22:07:33,895 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 00:07:45] 2025-06-02 22:07:33,895 | INFO     | collected zombie processes
[2025-06-03 00:07:45] 2025-06-02 22:07:33,895 | INFO     | will attempt to kill all subprocesses of pid=3978825
[2025-06-03 00:07:45] 2025-06-02 22:07:33,941 | INFO     | process IDs to be killed: [3978825] (in reverse order)
[2025-06-03 00:07:45] 2025-06-02 22:07:33,975 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 00:07:45] 2025-06-02 22:07:33,975 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 00:07:45] 2025-06-02 22:07:33,977 | INFO     | did not find any defunct processes belonging to 3978825
[2025-06-03 00:07:45] 2025-06-02 22:07:33,978 | INFO     | did not find any defunct processes belonging to 3978825
[2025-06-03 00:07:45] 2025-06-02 22:07:33,978 | INFO     | ready for new job
[2025-06-03 00:07:45] 2025-06-02 22:07:33,978 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 00:07:45] 2025-06-02 22:07:33,979 | INFO     | **************************************
[2025-06-03 00:07:45] 2025-06-02 22:07:33,979 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 00:07:45] 2025-06-02 22:07:33,979 | INFO     | **************************************
[2025-06-03 00:07:45] 2025-06-02 22:07:33,979 | INFO     | 
[2025-06-03 00:07:45] 2025-06-02 22:07:33,980 | INFO     | architecture information:
[2025-06-03 00:07:45] 2025-06-02 22:07:33,980 | INFO     | executing command: cat /etc/os-release
[2025-06-03 00:07:45] 2025-06-02 22:07:33,994 | INFO     | cat /etc/os-release:
[2025-06-03 00:07:45] NAME="CentOS Linux"
[2025-06-03 00:07:45] VERSION="7 (Core)"
[2025-06-03 00:07:45] ID="centos"
[2025-06-03 00:07:45] ID_LIKE="rhel fedora"
[2025-06-03 00:07:45] VERSION_ID="7"
[2025-06-03 00:07:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 00:07:45] ANSI_COLOR="0;31"
[2025-06-03 00:07:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 00:07:45] HOME_URL="https://www.centos.org/"
[2025-06-03 00:07:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 00:07:45] 
[2025-06-03 00:07:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 00:07:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 00:07:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 00:07:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 00:07:45] 
[2025-06-03 00:07:45] 2025-06-02 22:07:33,995 | INFO     | **************************************
[2025-06-03 00:07:45] 2025-06-02 22:07:34,498 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-06-03 00:07:45] 2025-06-02 22:07:34,516 | INFO     | sufficient remaining disk space (326466797568 B)
[2025-06-03 00:07:45] 2025-06-02 22:07:34,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 00:07:45] 2025-06-02 22:07:34,516 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 00:07:45] 2025-06-02 22:07:34,516 | INFO     | update_server=False
[2025-06-03 00:07:45] 2025-06-02 22:07:34,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 00:07:45] 2025-06-02 22:07:34,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:07:45] 2025-06-02 22:07:34,516 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 00:07:45] 2025-06-02 22:07:34,517 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 00:07:45] 2025-06-02 22:07:34,517 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:07:45] 2025-06-02 22:07:34,517 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 00:07:45] 2025-06-02 22:07:34,517 | INFO     | aborting loop
[2025-06-03 00:07:45] 2025-06-02 22:07:34,517 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 00:07:45] 2025-06-02 22:07:34,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 00:07:45] 2025-06-02 22:07:34,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 00:07:45] 2025-06-02 22:07:34,760 | INFO     | all payload control threads have been joined
[2025-06-03 00:07:45] 2025-06-02 22:07:35,257 | INFO     | all data control threads have been joined
[2025-06-03 00:07:45] 2025-06-02 22:07:35,522 | INFO     | [job] queue monitor thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:35,522 | INFO     | [job] retrieve thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:35,523 | INFO     | [job] job monitor thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:35,766 | INFO     | [payload] control thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:35,779 | INFO     | all job control threads have been joined
[2025-06-03 00:07:45] 2025-06-02 22:07:35,888 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,142 | INFO     | [data] copytool_in thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,262 | INFO     | [data] control thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,416 | INFO     | [payload] failed_post thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,523 | INFO     | [data] copytool_out thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,645 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,784 | INFO     | [job] control thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,825 | INFO     | [job] validate thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,939 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:36,961 | INFO     | [payload] validate_post thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:37,023 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:38,523 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 00:07:45] 2025-06-02 22:07:40,592 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140561790715712)>', '<ExcThread(monitor, started 140560841037568)>']
[2025-06-03 00:07:45] 2025-06-02 22:07:41,555 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 00:07:45] 2025-06-02 22:07:41,555 | INFO     | [monitor] control thread has ended
[2025-06-03 00:07:45] 2025-06-02 22:07:45,618 | INFO     | all workflow threads have been joined
[2025-06-03 00:07:45] 2025-06-02 22:07:45,618 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 00:07:45] 2025-06-02 22:07:45,618 | INFO     | traces error code: 0
[2025-06-03 00:07:45] 2025-06-02 22:07:45,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 00:07:45] 2025-06-02 22:07:45,698 [wrapper] ==== pilot stdout END ====
[2025-06-03 00:07:45] 2025-06-02 22:07:45,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 00:07:45] 2025-06-02 22:07:45,706 [wrapper] pilotpid: 3972194
[2025-06-03 00:07:45] 2025-06-02 22:07:45,710 [wrapper] Pilot exit status: 0
[2025-06-03 00:07:45] 2025-06-02 22:07:45,723 [wrapper] pandaids: 6677383183
[2025-06-03 00:07:45] 2025-06-02 22:07:45,747 [wrapper] cleanup supervisor_pilot 3988824 3972195
[2025-06-03 00:07:45] 2025-06-02 22:07:45,751 [wrapper] Test setup, not cleaning
[2025-06-03 00:07:45] 2025-06-02 22:07:45,755 [wrapper] apfmon messages muted
[2025-06-03 00:07:45] 2025-06-02 22:07:45,759 [wrapper] ==== wrapper stdout END ====
[2025-06-03 00:07:45] 2025-06-02 22:07:45,763 [wrapper] ==== wrapper stderr END ====
[2025-06-03 00:07:45]  *** Error codes and diagnostics ***
[2025-06-03 00:07:45]     "exeErrorCode": 0,
[2025-06-03 00:07:45]     "exeErrorDiag": "",
[2025-06-03 00:07:45]     "pilotErrorCode": 0,
[2025-06-03 00:07:45]     "pilotErrorDiag": "",
[2025-06-03 00:07:45]  *** Listing of results directory ***
[2025-06-03 00:07:45] total 392084
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc    495897 Jun  2 18:11 pilot3.tar.gz
[2025-06-03 00:07:45] -rwx------ 1 boinc boinc     37140 Jun  2 18:20 runpilot2-wrapper.sh
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc      5111 Jun  2 18:20 queuedata.json
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc       100 Jun  2 23:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 00:07:45] -rwxr-xr-x 1 boinc boinc      7986 Jun  2 23:04 run_atlas
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc       105 Jun  2 23:04 job.xml
[2025-06-03 00:07:45] -rw-r--r-- 2 boinc boinc 217565166 Jun  2 23:04 EVNT.45006593._000138.pool.root.1
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc      6849 Jun  2 23:04 init_data.xml
[2025-06-03 00:07:45] drwxrwx--x 2 boinc boinc      4096 Jun  2 23:04 shared
[2025-06-03 00:07:45] -rw-r--r-- 2 boinc boinc    508871 Jun  2 23:04 input.tar.gz
[2025-06-03 00:07:45] -rw-r--r-- 2 boinc boinc     15093 Jun  2 23:04 start_atlas.sh
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc         0 Jun  2 23:04 boinc_lockfile
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc      2521 Jun  2 23:04 pandaJob.out
[2025-06-03 00:07:45] -rw------- 1 boinc boinc    987975 Jun  2 23:04 agis_schedconf.cvmfs.json
[2025-06-03 00:07:45] -rw------- 1 boinc boinc   1603667 Jun  2 23:04 agis_ddmendpoints.agis.ALL.json
[2025-06-03 00:07:45] drwx------ 4 boinc boinc      4096 Jun  2 23:04 pilot3
[2025-06-03 00:07:45] -rw------- 1 boinc boinc 178848231 Jun  3 00:07 HITS.45006595._003447.pool.root.1
[2025-06-03 00:07:45] -rw------- 1 boinc boinc        95 Jun  3 00:07 pilot_heartbeat.json
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc       529 Jun  3 00:07 boinc_task_state.xml
[2025-06-03 00:07:45] -rw------- 1 boinc boinc      1022 Jun  3 00:07 memory_monitor_summary.json
[2025-06-03 00:07:45] -rw------- 1 boinc boinc    242112 Jun  3 00:07 log.45006595._003447.job.log.tgz.1
[2025-06-03 00:07:45] -rw------- 1 boinc boinc      7655 Jun  3 00:07 heartbeat.json
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc      8192 Jun  3 00:07 boinc_mmap_file
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc        27 Jun  3 00:07 wrapper_checkpoint.txt
[2025-06-03 00:07:45] -rw------- 1 boinc boinc      4480 Jun  3 00:07 pilotlog.txt
[2025-06-03 00:07:45] -rw------- 1 boinc boinc    378562 Jun  3 00:07 log.45006595._003447.job.log.1
[2025-06-03 00:07:45] -rw------- 1 boinc boinc       357 Jun  3 00:07 output.list
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc       620 Jun  3 00:07 runtime_log
[2025-06-03 00:07:45] -rw------- 1 boinc boinc    634880 Jun  3 00:07 result.tar.gz
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc      8738 Jun  3 00:07 runtime_log.err
[2025-06-03 00:07:45] -rw------- 1 boinc boinc       659 Jun  3 00:07 PTzLDmn4Mg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxKfKDmgMuCRn.diag
[2025-06-03 00:07:45] -rw-r--r-- 1 boinc boinc     21311 Jun  3 00:07 stderr.txt
[2025-06-03 00:07:45] HITS file was successfully produced:
[2025-06-03 00:07:45] -rw------- 1 boinc boinc 178848231 Jun  3 00:07 shared/HITS.pool.root.1
[2025-06-03 00:07:45]  *** Contents of shared directory: ***
[2025-06-03 00:07:45] total 388272
[2025-06-03 00:07:45] -rw-r--r-- 2 boinc boinc 217565166 Jun  2 23:04 ATLAS.root_0
[2025-06-03 00:07:45] -rw-r--r-- 2 boinc boinc    508871 Jun  2 23:04 input.tar.gz
[2025-06-03 00:07:45] -rw-r--r-- 2 boinc boinc     15093 Jun  2 23:04 start_atlas.sh
[2025-06-03 00:07:45] -rw------- 1 boinc boinc 178848231 Jun  3 00:07 HITS.pool.root.1
[2025-06-03 00:07:45] -rw------- 1 boinc boinc    634880 Jun  3 00:07 result.tar.gz
00:07:47 (3968494): run_atlas exited; CPU time 14061.917395
00:07:47 (3968494): called boinc_finish(0)

</stderr_txt>
]]>

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