Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:18:41 (26088): wrapper (7.7.26015): starting
04:18:41 (26088): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:18:41] Arguments: --nthreads 8
[2025-06-03 04:18:41] Threads: 8
[2025-06-03 04:18:41] Checking for CVMFS
[2025-06-03 04:18:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:18:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:18:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:18:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:18:43] 2.11.2.0 26010 31193 94700 146724 2 154 21759053 25165825 4355 130560 0 15643112 99.785 18558708 2031 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 04:18:43] CVMFS is ok
[2025-06-03 04:18:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:18:43] Checking for apptainer binary...
[2025-06-03 04:18:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:18:43] Running /usr/bin/apptainer --version
[2025-06-03 04:18:43] apptainer version 1.3.2-1.el7
[2025-06-03 04:18:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:18:45] cg-vwn216.simple-grid.lan
[2025-06-03 04:18:45] apptainer works
[2025-06-03 04:18:45] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:18:45] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:18:45] Starting ATLAS job with PandaID=6677388388
[2025-06-03 04:18:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 07:45:13]  *** The last 200 lines of the pilot log: ***
[2025-06-03 07:45:13] 2025-06-03 05:44:55,759 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 07:45:13] 2025-06-03 05:44:55,760 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 07:45:13] 2025-06-03 05:44:55,760 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 07:45:13] 2025-06-03 05:44:55,770 | INFO     | fitting pss+swap vs Time
[2025-06-03 07:45:13] 2025-06-03 05:44:55,770 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,772 | INFO     | sum of deviations: -51799447073.50001
[2025-06-03 07:45:13] 2025-06-03 05:44:55,772 | INFO     | mean x: 1748923272.5
[2025-06-03 07:45:13] 2025-06-03 05:44:55,772 | INFO     | mean y: 2601034.965
[2025-06-03 07:45:13] 2025-06-03 05:44:55,772 | INFO     | -- intersect: 36523236634.62663
[2025-06-03 07:45:13] 2025-06-03 05:44:55,772 | INFO     | intersect: 36523236634.62663
[2025-06-03 07:45:13] 2025-06-03 05:44:55,773 | INFO     | chi2: 2.687139806485609
[2025-06-03 07:45:13] 2025-06-03 05:44:55,773 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,775 | INFO     | sum of deviations: -34547021514.99999
[2025-06-03 07:45:13] 2025-06-03 05:44:55,775 | INFO     | mean x: 1748923120.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,775 | INFO     | mean y: 2615305.1384615386
[2025-06-03 07:45:13] 2025-06-03 05:44:55,775 | INFO     | -- intersect: 26281715624.098057
[2025-06-03 07:45:13] 2025-06-03 05:44:55,775 | INFO     | intersect: 26281715624.098057
[2025-06-03 07:45:13] 2025-06-03 05:44:55,775 | INFO     | chi2: 1.8717616020667764
[2025-06-03 07:45:13] 2025-06-03 05:44:55,776 | INFO     | current chi2=1.8717616020667764 (change=30.3437209500919 %)
[2025-06-03 07:45:13] 2025-06-03 05:44:55,776 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 07:45:13] 2025-06-03 05:44:55,777 | INFO     | sum of deviations: -31122781726.499992
[2025-06-03 07:45:13] 2025-06-03 05:44:55,777 | INFO     | mean x: 1748922967.5
[2025-06-03 07:45:13] 2025-06-03 05:44:55,778 | INFO     | mean y: 2618335.3842105265
[2025-06-03 07:45:13] 2025-06-03 05:44:55,778 | INFO     | -- intersect: 25595659291.058643
[2025-06-03 07:45:13] 2025-06-03 05:44:55,778 | INFO     | intersect: 25595659291.058643
[2025-06-03 07:45:13] 2025-06-03 05:44:55,778 | INFO     | chi2: 1.8729255216987526
[2025-06-03 07:45:13] 2025-06-03 05:44:55,778 | INFO     | current chi2=1.8729255216987526 (change=-0.06218311299318062 %)
[2025-06-03 07:45:13] 2025-06-03 05:44:55,778 | INFO     | right removable region: 189
[2025-06-03 07:45:13] 2025-06-03 05:44:55,779 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,780 | INFO     | sum of deviations: -86501786819.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,780 | INFO     | mean x: 1748923425.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,780 | INFO     | mean y: 2629923.8615384614
[2025-06-03 07:45:13] 2025-06-03 05:44:55,780 | INFO     | -- intersect: 65802500081.32499
[2025-06-03 07:45:13] 2025-06-03 05:44:55,780 | INFO     | intersect: 65802500081.32499
[2025-06-03 07:45:13] 2025-06-03 05:44:55,781 | INFO     | chi2: 1.0563058009669015
[2025-06-03 07:45:13] 2025-06-03 05:44:55,781 | INFO     | current chi2=1.0563058009669015 (change=60.6903296055743 %)
[2025-06-03 07:45:13] 2025-06-03 05:44:55,781 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 07:45:13] 2025-06-03 05:44:55,783 | INFO     | sum of deviations: -87698545026.00003
[2025-06-03 07:45:13] 2025-06-03 05:44:55,783 | INFO     | mean x: 1748923577.5
[2025-06-03 07:45:13] 2025-06-03 05:44:55,783 | INFO     | mean y: 2630933.989473684
[2025-06-03 07:45:13] 2025-06-03 05:44:55,783 | INFO     | -- intersect: 72119360639.19933
[2025-06-03 07:45:13] 2025-06-03 05:44:55,783 | INFO     | intersect: 72119360639.19933
[2025-06-03 07:45:13] 2025-06-03 05:44:55,784 | INFO     | chi2: 1.0043791613732511
[2025-06-03 07:45:13] 2025-06-03 05:44:55,784 | INFO     | current chi2=1.0043791613732511 (change=4.915871857005685 %)
[2025-06-03 07:45:13] 2025-06-03 05:44:55,784 | INFO     | left removable region: 20
[2025-06-03 07:45:13] 2025-06-03 05:44:55,784 | INFO     | sum of square deviations: 1496660620.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,791 | INFO     | sum of deviations: -60259626469.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,792 | INFO     | mean x: 1748923547.0
[2025-06-03 07:45:13] 2025-06-03 05:44:55,792 | INFO     | mean y: 2646039.5562130176
[2025-06-03 07:45:13] 2025-06-03 05:44:55,792 | INFO     | -- intersect: 70419063934.65562
[2025-06-03 07:45:13] 2025-06-03 05:44:55,792 | INFO     | intersect: 70419063934.65562
[2025-06-03 07:45:13] 2025-06-03 05:44:55,793 | INFO     | chi2: 0.14398851148300187
[2025-06-03 07:45:13] 2025-06-03 05:44:55,793 | INFO     | -- intersect: 70419063934.65562
[2025-06-03 07:45:13] 2025-06-03 05:44:55,793 | INFO     | current memory leak: -40.26 B/s (using 169 data points, chi2=0.14)
[2025-06-03 07:45:13] 2025-06-03 05:44:55,794 | INFO     | ..............................
[2025-06-03 07:45:13] 2025-06-03 05:44:55,794 | INFO     | . Timing measurements:
[2025-06-03 07:45:13] 2025-06-03 05:44:55,794 | INFO     | . get job = 0 s
[2025-06-03 07:45:13] 2025-06-03 05:44:55,794 | INFO     | . initial setup = 2 s
[2025-06-03 07:45:13] 2025-06-03 05:44:55,794 | INFO     | . payload setup = 16 s
[2025-06-03 07:45:13] 2025-06-03 05:44:55,794 | INFO     | . stage-in = 0 s
[2025-06-03 07:45:13] 2025-06-03 05:44:55,794 | INFO     | . payload execution = 12213 s
[2025-06-03 07:45:13] 2025-06-03 05:44:55,794 | INFO     | . stage-out = 3 s
[2025-06-03 07:45:13] 2025-06-03 05:44:55,795 | INFO     | . log creation = 1 s
[2025-06-03 07:45:13] 2025-06-03 05:44:55,795 | INFO     | ..............................
[2025-06-03 07:45:13] 2025-06-03 05:44:56,297 | INFO     | 
[2025-06-03 07:45:13] 2025-06-03 05:44:56,298 | INFO     | job summary report
[2025-06-03 07:45:13] 2025-06-03 05:44:56,298 | INFO     | --------------------------------------------------
[2025-06-03 07:45:13] 2025-06-03 05:44:56,298 | INFO     | PanDA job id: 6677388388
[2025-06-03 07:45:13] 2025-06-03 05:44:56,298 | INFO     | task id: 45006595
[2025-06-03 07:45:13] 2025-06-03 05:44:56,298 | INFO     | errors: (none)
[2025-06-03 07:45:13] 2025-06-03 05:44:56,298 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 07:45:13] 2025-06-03 05:44:56,298 | INFO     | pilot state: finished 
[2025-06-03 07:45:13] 2025-06-03 05:44:56,298 | INFO     | transexitcode: 0
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | exeerrorcode: 0
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | exeerrordiag: 
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | exitcode: 0
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | exitmsg: OK
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | cpuconsumptiontime: 46506 s
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | nevents: 400
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | neventsw: 0
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | pid: 5917
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | pgrp: 5917
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | corecount: 8
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | event service: False
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | sizes: {0: 2404956, 1: 2405155, 8: 2405361, 12: 2405389, 12233: 2434482, 12234: 2434481, 12237: 2443608, 12239: 2443664, 12331: 2443834}
[2025-06-03 07:45:13] 2025-06-03 05:44:56,299 | INFO     | --------------------------------------------------
[2025-06-03 07:45:13] 2025-06-03 05:44:56,300 | INFO     | 
[2025-06-03 07:45:13] 2025-06-03 05:44:56,300 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-03 07:45:13] 2025-06-03 05:44:56,557 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,557 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,557 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,557 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,558 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,558 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,558 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,558 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,559 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,559 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,559 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,559 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,559 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,559 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,559 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 07:45:13] 2025-06-03 05:44:56,559 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 07:45:13] 2025-06-03 05:44:56,560 | INFO     | job 6677388388 has completed (purged errors)
[2025-06-03 07:45:13] 2025-06-03 05:44:56,560 | INFO     | overall cleanup function is called
[2025-06-03 07:45:13] 2025-06-03 05:44:57,568 | INFO     | --- collectZombieJob: --- 10, [5917]
[2025-06-03 07:45:13] 2025-06-03 05:44:57,569 | INFO     | zombie collector waiting for pid 5917
[2025-06-03 07:45:13] 2025-06-03 05:44:57,569 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 07:45:13] 2025-06-03 05:44:57,569 | INFO     | collected zombie processes
[2025-06-03 07:45:13] 2025-06-03 05:44:57,569 | INFO     | will attempt to kill all subprocesses of pid=5917
[2025-06-03 07:45:13] 2025-06-03 05:44:57,702 | INFO     | process IDs to be killed: [5917] (in reverse order)
[2025-06-03 07:45:13] 2025-06-03 05:44:58,174 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 07:45:13] 2025-06-03 05:44:58,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 07:45:13] 2025-06-03 05:44:58,178 | INFO     | did not find any defunct processes belonging to 5917
[2025-06-03 07:45:13] 2025-06-03 05:44:58,183 | INFO     | did not find any defunct processes belonging to 5917
[2025-06-03 07:45:13] 2025-06-03 05:44:58,183 | INFO     | ready for new job
[2025-06-03 07:45:13] 2025-06-03 05:44:58,183 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 07:45:13] 2025-06-03 05:44:58,185 | INFO     | **************************************
[2025-06-03 07:45:13] 2025-06-03 05:44:58,186 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 07:45:13] 2025-06-03 05:44:58,186 | INFO     | **************************************
[2025-06-03 07:45:13] 2025-06-03 05:44:58,186 | INFO     | 
[2025-06-03 07:45:13] 2025-06-03 05:44:58,186 | INFO     | pilot is running in a VM
[2025-06-03 07:45:13] 2025-06-03 05:44:58,187 | INFO     | architecture information:
[2025-06-03 07:45:13] 2025-06-03 05:44:58,205 | INFO     | executing command: cat /etc/os-release
[2025-06-03 07:45:13] 2025-06-03 05:44:58,444 | INFO     | cat /etc/os-release:
[2025-06-03 07:45:13] NAME="CentOS Linux"
[2025-06-03 07:45:13] VERSION="7 (Core)"
[2025-06-03 07:45:13] ID="centos"
[2025-06-03 07:45:13] ID_LIKE="rhel fedora"
[2025-06-03 07:45:13] VERSION_ID="7"
[2025-06-03 07:45:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 07:45:13] ANSI_COLOR="0;31"
[2025-06-03 07:45:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 07:45:13] HOME_URL="https://www.centos.org/"
[2025-06-03 07:45:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 07:45:13] 
[2025-06-03 07:45:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 07:45:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 07:45:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 07:45:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 07:45:13] 
[2025-06-03 07:45:13] 2025-06-03 05:44:58,444 | INFO     | **************************************
[2025-06-03 07:45:13] 2025-06-03 05:44:58,947 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-03 07:45:13] 2025-06-03 05:44:59,156 | INFO     | sufficient remaining disk space (496973643776 B)
[2025-06-03 07:45:13] 2025-06-03 05:44:59,156 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 07:45:13] 2025-06-03 05:44:59,156 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 07:45:13] 2025-06-03 05:44:59,156 | INFO     | update_server=False
[2025-06-03 07:45:13] 2025-06-03 05:44:59,156 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 07:45:13] 2025-06-03 05:44:59,158 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 07:45:13] 2025-06-03 05:44:59,158 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 07:45:13] 2025-06-03 05:44:59,158 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 07:45:13] 2025-06-03 05:44:59,158 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 07:45:13] 2025-06-03 05:44:59,195 | INFO     | all payload control threads have been joined
[2025-06-03 07:45:13] 2025-06-03 05:44:59,632 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 07:45:13] 2025-06-03 05:44:59,632 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 07:45:13] 2025-06-03 05:44:59,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:45:13] 2025-06-03 05:44:59,632 | INFO     | will abort loop
[2025-06-03 07:45:13] 2025-06-03 05:44:59,884 | INFO     | all job control threads have been joined
[2025-06-03 07:45:13] 2025-06-03 05:45:00,087 | INFO     | all data control threads have been joined
[2025-06-03 07:45:13] 2025-06-03 05:45:00,163 | INFO     | [job] retrieve thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,202 | INFO     | [payload] control thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,379 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,471 | INFO     | [job] validate thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,504 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 07:45:13] 2025-06-03 05:45:00,509 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,530 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 07:45:13] 2025-06-03 05:45:00,639 | INFO     | [job] job monitor thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,674 | INFO     | [data] copytool_in thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,702 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,787 | INFO     | [payload] failed_post thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,891 | INFO     | [job] control thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,904 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,920 | INFO     | [payload] validate_post thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:00,971 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 07:45:13] 2025-06-03 05:45:01,093 | INFO     | [data] control thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:01,978 | INFO     | [job] queue monitor thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:02,511 | INFO     | [data] copytool_out thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:04,540 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 07:45:13] 2025-06-03 05:45:05,444 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139874074982208)>', '<ExcThread(monitor, started 139873629484800)>']
[2025-06-03 07:45:13] 2025-06-03 05:45:06,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 07:45:13] 2025-06-03 05:45:06,200 | INFO     | [monitor] control thread has ended
[2025-06-03 07:45:13] 2025-06-03 05:45:10,470 | INFO     | all workflow threads have been joined
[2025-06-03 07:45:13] 2025-06-03 05:45:10,470 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 07:45:13] 2025-06-03 05:45:10,470 | INFO     | traces error code: 0
[2025-06-03 07:45:13] 2025-06-03 05:45:10,470 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 07:45:13] 2025-06-03 05:45:10,832 [wrapper] ==== pilot stdout END ====
[2025-06-03 07:45:13] 2025-06-03 05:45:10,867 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 07:45:13] 2025-06-03 05:45:10,938 [wrapper] pilotpid: 29775
[2025-06-03 07:45:13] 2025-06-03 05:45:11,020 [wrapper] Pilot exit status: 0
[2025-06-03 07:45:13] 2025-06-03 05:45:11,321 [wrapper] pandaids: 6677388388
[2025-06-03 07:45:13] 2025-06-03 05:45:11,935 [wrapper] cleanup supervisor_pilot 18408 29776
[2025-06-03 07:45:13] 2025-06-03 05:45:11,965 [wrapper] Test setup, not cleaning
[2025-06-03 07:45:13] 2025-06-03 05:45:11,981 [wrapper] apfmon messages muted
[2025-06-03 07:45:13] 2025-06-03 05:45:11,995 [wrapper] ==== wrapper stdout END ====
[2025-06-03 07:45:13] 2025-06-03 05:45:12,042 [wrapper] ==== wrapper stderr END ====
[2025-06-03 07:45:13]  *** Error codes and diagnostics ***
[2025-06-03 07:45:13]     "exeErrorCode": 0,
[2025-06-03 07:45:13]     "exeErrorDiag": "",
[2025-06-03 07:45:13]     "pilotErrorCode": 0,
[2025-06-03 07:45:13]     "pilotErrorDiag": "",
[2025-06-03 07:45:13]  *** Listing of results directory ***
[2025-06-03 07:45:13] total 384168
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:40 queuedata.json
[2025-06-03 07:45:13] -rwx------. 1 boinc boinc     37140 Jun  2 19:40 runpilot2-wrapper.sh
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc       100 Jun  3 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 07:45:13] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 04:18 run_atlas
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc       105 Jun  3 04:18 job.xml
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc      6392 Jun  3 04:18 init_data.xml
[2025-06-03 07:45:13] -rw-r--r--. 2 boinc boinc 213790410 Jun  3 04:18 EVNT.45006593._000241.pool.root.1
[2025-06-03 07:45:13] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:18 start_atlas.sh
[2025-06-03 07:45:13] drwxrwx--x. 2 boinc boinc        68 Jun  3 04:18 shared
[2025-06-03 07:45:13] -rw-r--r--. 2 boinc boinc    508878 Jun  3 04:18 input.tar.gz
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc         0 Jun  3 04:18 boinc_lockfile
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc      2520 Jun  3 04:18 pandaJob.out
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc    988073 Jun  3 04:19 agis_schedconf.cvmfs.json
[2025-06-03 07:45:13] drwx------. 4 boinc boinc      4096 Jun  3 04:19 pilot3
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc 172884542 Jun  3 07:42 HITS.45006595._006015.pool.root.1
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:42 boinc_task_state.xml
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc      1016 Jun  3 07:43 memory_monitor_summary.json
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc   1603667 Jun  3 07:43 agis_ddmendpoints.agis.ALL.json
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc    370415 Jun  3 07:43 log.45006595._006015.job.log.tgz.1
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc      7688 Jun  3 07:44 heartbeat.json
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc        95 Jun  3 07:44 pilot_heartbeat.json
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc      4726 Jun  3 07:45 pilotlog.txt
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc   1071088 Jun  3 07:45 log.45006595._006015.job.log.1
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc       357 Jun  3 07:45 output.list
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc      8192 Jun  3 07:45 boinc_mmap_file
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:45 runtime_log
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc   1464320 Jun  3 07:45 result.tar.gz
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc      8673 Jun  3 07:45 runtime_log.err
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc       656 Jun  3 07:45 rbjLDmkKOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxofKDmgGybJn.diag
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc        28 Jun  3 07:45 wrapper_checkpoint.txt
[2025-06-03 07:45:13] -rw-r--r--. 1 boinc boinc     20497 Jun  3 07:45 stderr.txt
[2025-06-03 07:45:13] HITS file was successfully produced:
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc 172884542 Jun  3 07:42 shared/HITS.pool.root.1
[2025-06-03 07:45:13]  *** Contents of shared directory: ***
[2025-06-03 07:45:13] total 379564
[2025-06-03 07:45:13] -rw-r--r--. 2 boinc boinc 213790410 Jun  3 04:18 ATLAS.root_0
[2025-06-03 07:45:13] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:18 start_atlas.sh
[2025-06-03 07:45:13] -rw-r--r--. 2 boinc boinc    508878 Jun  3 04:18 input.tar.gz
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc 172884542 Jun  3 07:42 HITS.pool.root.1
[2025-06-03 07:45:13] -rw-------. 1 boinc boinc   1464320 Jun  3 07:45 result.tar.gz
07:45:15 (26088): run_atlas exited; CPU time 46650.424807
07:45:15 (26088): called boinc_finish(0)

</stderr_txt>
]]>

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