Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:29:24 (21726): wrapper (7.7.26015): starting
08:29:24 (21726): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:29:24] Arguments: --nthreads 8
[2025-06-03 08:29:24] Threads: 8
[2025-06-03 08:29:24] Checking for CVMFS
[2025-06-03 08:29:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:29:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:29:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:29:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:29:26] 2.11.2.0 22385 31590 88576 146731 1 16 24945938 25165825 4633 130560 0 17692021 99.813 18629386 2298 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:29:26] CVMFS is ok
[2025-06-03 08:29:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:29:26] Checking for apptainer binary...
[2025-06-03 08:29:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:29:26] Running /usr/bin/apptainer --version
[2025-06-03 08:29:26] apptainer version 1.3.2-1.el7
[2025-06-03 08:29:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:33:51] cg-vwn497.simple-grid.lan
[2025-06-03 08:33:51] apptainer works
[2025-06-03 08:33:51] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:33:51] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:33:51] Starting ATLAS job with PandaID=6677387604
[2025-06-03 08:33:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:48:23]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:48:23] 2025-06-03 09:48:08,572 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:48:23] 2025-06-03 09:48:08,576 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:48:23] 2025-06-03 09:48:08,578 | INFO     | sum of square deviations: 2126802667.5
[2025-06-03 11:48:23] 2025-06-03 09:48:08,579 | INFO     | sum of deviations: -31621814186.499996
[2025-06-03 11:48:23] 2025-06-03 09:48:08,579 | INFO     | mean x: 1748938283.5
[2025-06-03 11:48:23] 2025-06-03 09:48:08,579 | INFO     | mean y: 2523005.1315789474
[2025-06-03 11:48:23] 2025-06-03 09:48:08,579 | INFO     | -- intersect: 26006158541.992336
[2025-06-03 11:48:23] 2025-06-03 09:48:08,579 | INFO     | intersect: 26006158541.992336
[2025-06-03 11:48:23] 2025-06-03 09:48:08,580 | INFO     | chi2: 2.623742183697958
[2025-06-03 11:48:23] 2025-06-03 09:48:08,580 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,582 | INFO     | sum of deviations: -17811170399.999992
[2025-06-03 11:48:23] 2025-06-03 09:48:08,582 | INFO     | mean x: 1748938131.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,582 | INFO     | mean y: 2535635.502702703
[2025-06-03 11:48:23] 2025-06-03 09:48:08,582 | INFO     | -- intersect: 15869212804.845835
[2025-06-03 11:48:23] 2025-06-03 09:48:08,582 | INFO     | intersect: 15869212804.845835
[2025-06-03 11:48:23] 2025-06-03 09:48:08,582 | INFO     | chi2: 1.858391521114577
[2025-06-03 11:48:23] 2025-06-03 09:48:08,582 | INFO     | current chi2=1.858391521114577 (change=29.17019314392696 %)
[2025-06-03 11:48:23] 2025-06-03 09:48:08,583 | INFO     | sum of square deviations: 1808350185.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,586 | INFO     | sum of deviations: -16799197632.499998
[2025-06-03 11:48:23] 2025-06-03 09:48:08,586 | INFO     | mean x: 1748937978.5
[2025-06-03 11:48:23] 2025-06-03 09:48:08,587 | INFO     | mean y: 2536631.8833333333
[2025-06-03 11:48:23] 2025-06-03 09:48:08,587 | INFO     | -- intersect: 16249807205.64476
[2025-06-03 11:48:23] 2025-06-03 09:48:08,587 | INFO     | intersect: 16249807205.64476
[2025-06-03 11:48:23] 2025-06-03 09:48:08,587 | INFO     | chi2: 1.8571642096636565
[2025-06-03 11:48:23] 2025-06-03 09:48:08,587 | INFO     | current chi2=1.8571642096636565 (change=0.06604159763839171 %)
[2025-06-03 11:48:23] 2025-06-03 09:48:08,587 | INFO     | right removable region: 179
[2025-06-03 11:48:23] 2025-06-03 09:48:08,588 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,589 | INFO     | sum of deviations: -63741975681.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,589 | INFO     | mean x: 1748938436.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,589 | INFO     | mean y: 2552635.6972972974
[2025-06-03 11:48:23] 2025-06-03 09:48:08,590 | INFO     | -- intersect: 56785655819.16334
[2025-06-03 11:48:23] 2025-06-03 09:48:08,590 | INFO     | intersect: 56785655819.16334
[2025-06-03 11:48:23] 2025-06-03 09:48:08,590 | INFO     | chi2: 0.9773595749856108
[2025-06-03 11:48:23] 2025-06-03 09:48:08,590 | INFO     | current chi2=0.9773595749856108 (change=62.74940498886596 %)
[2025-06-03 11:48:23] 2025-06-03 09:48:08,590 | INFO     | sum of square deviations: 1808350185.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,592 | INFO     | sum of deviations: -61551650968.49999
[2025-06-03 11:48:23] 2025-06-03 09:48:08,592 | INFO     | mean x: 1748938588.5
[2025-06-03 11:48:23] 2025-06-03 09:48:08,592 | INFO     | mean y: 2550436.538888889
[2025-06-03 11:48:23] 2025-06-03 09:48:08,592 | INFO     | -- intersect: 59531981438.14162
[2025-06-03 11:48:23] 2025-06-03 09:48:08,592 | INFO     | intersect: 59531981438.14162
[2025-06-03 11:48:23] 2025-06-03 09:48:08,592 | INFO     | chi2: 0.9647184071152496
[2025-06-03 11:48:23] 2025-06-03 09:48:08,592 | INFO     | current chi2=0.9647184071152496 (change=1.2933999107285865 %)
[2025-06-03 11:48:23] 2025-06-03 09:48:08,593 | INFO     | left removable region: 20
[2025-06-03 11:48:23] 2025-06-03 09:48:08,593 | INFO     | sum of square deviations: 1246386160.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,594 | INFO     | sum of deviations: -36459498883.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,594 | INFO     | mean x: 1748938558.0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,594 | INFO     | mean y: 2555665.8364779875
[2025-06-03 11:48:23] 2025-06-03 09:48:08,594 | INFO     | -- intersect: 51162802343.99009
[2025-06-03 11:48:23] 2025-06-03 09:48:08,594 | INFO     | intersect: 51162802343.99009
[2025-06-03 11:48:23] 2025-06-03 09:48:08,594 | INFO     | chi2: 0.15760864093296587
[2025-06-03 11:48:23] 2025-06-03 09:48:08,595 | INFO     | -- intersect: 51162802343.99009
[2025-06-03 11:48:23] 2025-06-03 09:48:08,595 | INFO     | current memory leak: -29.25 B/s (using 159 data points, chi2=0.16)
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | ..............................
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | . Timing measurements:
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | . get job = 0 s
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | . initial setup = 2 s
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | . payload setup = 20 s
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | . stage-in = 0 s
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | . payload execution = 11578 s
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | . stage-out = 2 s
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | . log creation = 0 s
[2025-06-03 11:48:23] 2025-06-03 09:48:08,596 | INFO     | ..............................
[2025-06-03 11:48:23] 2025-06-03 09:48:08,722 | INFO     | 
[2025-06-03 11:48:23] 2025-06-03 09:48:08,722 | INFO     | job summary report
[2025-06-03 11:48:23] 2025-06-03 09:48:08,722 | INFO     | --------------------------------------------------
[2025-06-03 11:48:23] 2025-06-03 09:48:08,722 | INFO     | PanDA job id: 6677387604
[2025-06-03 11:48:23] 2025-06-03 09:48:08,722 | INFO     | task id: 45006595
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | errors: (none)
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | pilot state: finished 
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | transexitcode: 0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | exeerrorcode: 0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | exeerrordiag: 
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | exitcode: 0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | exitmsg: OK
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | cpuconsumptiontime: 43457 s
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | nevents: 400
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | neventsw: 0
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | pid: 10128
[2025-06-03 11:48:23] 2025-06-03 09:48:08,723 | INFO     | pgrp: 10128
[2025-06-03 11:48:23] 2025-06-03 09:48:08,724 | INFO     | corecount: 8
[2025-06-03 11:48:23] 2025-06-03 09:48:08,724 | INFO     | event service: False
[2025-06-03 11:48:23] 2025-06-03 09:48:08,724 | INFO     | sizes: {0: 2404348, 1: 2405205, 8: 2405411, 12: 2405439, 11603: 2434206, 11606: 2443333, 11617: 2443447}
[2025-06-03 11:48:23] 2025-06-03 09:48:08,724 | INFO     | --------------------------------------------------
[2025-06-03 11:48:23] 2025-06-03 09:48:08,724 | INFO     | 
[2025-06-03 11:48:23] 2025-06-03 09:48:08,724 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 11:48:23] 2025-06-03 09:48:08,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,765 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,765 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,765 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:48:23] 2025-06-03 09:48:08,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,767 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:48:23] 2025-06-03 09:48:08,767 | INFO     | job 6677387604 has completed (purged errors)
[2025-06-03 11:48:23] 2025-06-03 09:48:08,767 | INFO     | overall cleanup function is called
[2025-06-03 11:48:23] 2025-06-03 09:48:09,776 | INFO     | --- collectZombieJob: --- 10, [10128]
[2025-06-03 11:48:23] 2025-06-03 09:48:09,776 | INFO     | zombie collector waiting for pid 10128
[2025-06-03 11:48:23] 2025-06-03 09:48:09,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:48:23] 2025-06-03 09:48:09,776 | INFO     | collected zombie processes
[2025-06-03 11:48:23] 2025-06-03 09:48:09,777 | INFO     | will attempt to kill all subprocesses of pid=10128
[2025-06-03 11:48:23] 2025-06-03 09:48:09,864 | INFO     | process IDs to be killed: [10128] (in reverse order)
[2025-06-03 11:48:23] 2025-06-03 09:48:10,185 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:48:23] 2025-06-03 09:48:10,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:48:23] 2025-06-03 09:48:10,188 | INFO     | did not find any defunct processes belonging to 10128
[2025-06-03 11:48:23] 2025-06-03 09:48:10,191 | INFO     | did not find any defunct processes belonging to 10128
[2025-06-03 11:48:23] 2025-06-03 09:48:10,191 | INFO     | ready for new job
[2025-06-03 11:48:23] 2025-06-03 09:48:10,191 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:48:23] 2025-06-03 09:48:10,193 | INFO     | **************************************
[2025-06-03 11:48:23] 2025-06-03 09:48:10,193 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:48:23] 2025-06-03 09:48:10,193 | INFO     | **************************************
[2025-06-03 11:48:23] 2025-06-03 09:48:10,193 | INFO     | 
[2025-06-03 11:48:23] 2025-06-03 09:48:10,194 | INFO     | pilot is running in a VM
[2025-06-03 11:48:23] 2025-06-03 09:48:10,194 | INFO     | architecture information:
[2025-06-03 11:48:23] 2025-06-03 09:48:10,195 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:48:23] 2025-06-03 09:48:10,242 | INFO     | cat /etc/os-release:
[2025-06-03 11:48:23] NAME="CentOS Linux"
[2025-06-03 11:48:23] VERSION="7 (Core)"
[2025-06-03 11:48:23] ID="centos"
[2025-06-03 11:48:23] ID_LIKE="rhel fedora"
[2025-06-03 11:48:23] VERSION_ID="7"
[2025-06-03 11:48:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:48:23] ANSI_COLOR="0;31"
[2025-06-03 11:48:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:48:23] HOME_URL="https://www.centos.org/"
[2025-06-03 11:48:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:48:23] 
[2025-06-03 11:48:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:48:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:48:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:48:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:48:23] 
[2025-06-03 11:48:23] 2025-06-03 09:48:10,243 | INFO     | **************************************
[2025-06-03 11:48:23] 2025-06-03 09:48:10,752 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 11:48:23] 2025-06-03 09:48:11,038 | INFO     | PID=29981 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 11:48:23] 2025-06-03 09:48:11,039 | INFO     | .. there are 9 such processes running
[2025-06-03 11:48:23] 2025-06-03 09:48:11,332 | INFO     | sufficient remaining disk space (497743298560 B)
[2025-06-03 11:48:23] 2025-06-03 09:48:11,332 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:48:23] 2025-06-03 09:48:11,332 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:48:23] 2025-06-03 09:48:11,332 | INFO     | update_server=False
[2025-06-03 11:48:23] 2025-06-03 09:48:11,332 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:48:23] 2025-06-03 09:48:11,333 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 11:48:23] 2025-06-03 09:48:11,333 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:48:23] 2025-06-03 09:48:11,333 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:48:23] 2025-06-03 09:48:11,333 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:48:23] 2025-06-03 09:48:11,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:48:23] 2025-06-03 09:48:11,710 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 11:48:23] 2025-06-03 09:48:11,710 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 11:48:23] 2025-06-03 09:48:11,710 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:48:23] 2025-06-03 09:48:11,715 | INFO     | will abort loop
[2025-06-03 11:48:23] 2025-06-03 09:48:11,805 | INFO     | all payload control threads have been joined
[2025-06-03 11:48:23] 2025-06-03 09:48:12,164 | INFO     | all data control threads have been joined
[2025-06-03 11:48:23] 2025-06-03 09:48:12,210 | INFO     | all job control threads have been joined
[2025-06-03 11:48:23] 2025-06-03 09:48:12,337 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:12,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:48:23] 2025-06-03 09:48:12,551 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:12,625 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:12,723 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:12,811 | INFO     | [payload] control thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:12,829 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:13,115 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:13,170 | INFO     | [data] control thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:13,216 | INFO     | [job] control thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:13,316 | INFO     | [job] validate thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:13,347 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:13,521 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:13,716 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:13,746 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:48:23] 2025-06-03 09:48:13,826 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:14,752 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:16,484 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:48:23] 2025-06-03 09:48:17,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140285442053952)>', '<ExcThread(monitor, started 140284620953344)>']
[2025-06-03 11:48:23] 2025-06-03 09:48:18,367 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:48:23] 2025-06-03 09:48:18,367 | INFO     | [monitor] control thread has ended
[2025-06-03 11:48:23] 2025-06-03 09:48:22,668 | INFO     | all workflow threads have been joined
[2025-06-03 11:48:23] 2025-06-03 09:48:22,668 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:48:23] 2025-06-03 09:48:22,668 | INFO     | traces error code: 0
[2025-06-03 11:48:23] 2025-06-03 09:48:22,669 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:48:23] 2025-06-03 09:48:22,891 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:48:23] 2025-06-03 09:48:22,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:48:23] 2025-06-03 09:48:22,938 [wrapper] pilotpid: 29981
[2025-06-03 11:48:23] 2025-06-03 09:48:22,945 [wrapper] Pilot exit status: 0
[2025-06-03 11:48:23] 2025-06-03 09:48:22,977 [wrapper] pandaids: 6677387604
[2025-06-03 11:48:23] 2025-06-03 09:48:23,055 [wrapper] cleanup supervisor_pilot 21144 29982
[2025-06-03 11:48:23] 2025-06-03 09:48:23,114 [wrapper] Test setup, not cleaning
[2025-06-03 11:48:23] 2025-06-03 09:48:23,140 [wrapper] apfmon messages muted
[2025-06-03 11:48:23] 2025-06-03 09:48:23,147 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:48:23] 2025-06-03 09:48:23,154 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:48:23]  *** Error codes and diagnostics ***
[2025-06-03 11:48:23]     "exeErrorCode": 0,
[2025-06-03 11:48:23]     "exeErrorDiag": "",
[2025-06-03 11:48:23]     "pilotErrorCode": 0,
[2025-06-03 11:48:23]     "pilotErrorDiag": "",
[2025-06-03 11:48:23]  *** Listing of results directory ***
[2025-06-03 11:48:23] total 387112
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:29 queuedata.json
[2025-06-03 11:48:23] -rwx------. 1 boinc boinc     37140 Jun  2 19:29 runpilot2-wrapper.sh
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:48:23] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:29 run_atlas
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:29 job.xml
[2025-06-03 11:48:23] -rw-r--r--. 2 boinc boinc 216698836 Jun  3 08:29 EVNT.45006593._000223.pool.root.1
[2025-06-03 11:48:23] -rw-r--r--. 2 boinc boinc    508879 Jun  3 08:29 input.tar.gz
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc      6392 Jun  3 08:29 init_data.xml
[2025-06-03 11:48:23] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:29 start_atlas.sh
[2025-06-03 11:48:23] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:29 shared
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:29 boinc_lockfile
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc      2520 Jun  3 08:33 pandaJob.out
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc    986901 Jun  3 08:34 agis_schedconf.cvmfs.json
[2025-06-03 11:48:23] drwx------. 4 boinc boinc      4096 Jun  3 08:34 pilot3
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc 173112988 Jun  3 11:46 HITS.45006595._005565.pool.root.1
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc       531 Jun  3 11:47 boinc_task_state.xml
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc        95 Jun  3 11:47 pilot_heartbeat.json
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc      1018 Jun  3 11:47 memory_monitor_summary.json
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc   1603667 Jun  3 11:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc    365378 Jun  3 11:47 log.45006595._005565.job.log.tgz.1
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc      7688 Jun  3 11:48 heartbeat.json
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:48 wrapper_checkpoint.txt
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:48 boinc_mmap_file
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc      5118 Jun  3 11:48 pilotlog.txt
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc   1021360 Jun  3 11:48 log.45006595._005565.job.log.1
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc       357 Jun  3 11:48 output.list
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc       620 Jun  3 11:48 runtime_log
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc   1402880 Jun  3 11:48 result.tar.gz
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc      8673 Jun  3 11:48 runtime_log.err
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc       656 Jun  3 11:48 5kiLDm89Ng7n9Rq4apOajLDm4fhM0noT9bVof3QYDmuxVKDmMnCe6m.diag
[2025-06-03 11:48:23] -rw-r--r--. 1 boinc boinc     20600 Jun  3 11:48 stderr.txt
[2025-06-03 11:48:23] HITS file was successfully produced:
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc 173112988 Jun  3 11:46 shared/HITS.pool.root.1
[2025-06-03 11:48:23]  *** Contents of shared directory: ***
[2025-06-03 11:48:23] total 382564
[2025-06-03 11:48:23] -rw-r--r--. 2 boinc boinc 216698836 Jun  3 08:29 ATLAS.root_0
[2025-06-03 11:48:23] -rw-r--r--. 2 boinc boinc    508879 Jun  3 08:29 input.tar.gz
[2025-06-03 11:48:23] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:29 start_atlas.sh
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc 173112988 Jun  3 11:46 HITS.pool.root.1
[2025-06-03 11:48:23] -rw-------. 1 boinc boinc   1402880 Jun  3 11:48 result.tar.gz
11:48:24 (21726): run_atlas exited; CPU time 43590.807864
11:48:24 (21726): called boinc_finish(0)

</stderr_txt>
]]>

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