Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:34:21 (30561): wrapper (7.7.26015): starting
06:34:21 (30561): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 06:34:21] Arguments: --nthreads 8
[2025-06-03 06:34:21] Threads: 8
[2025-06-03 06:34:21] Checking for CVMFS
[2025-06-03 06:34:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 06:34:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 06:34:22] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 06:34:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 06:34:24] 2.11.2.0 13101 31309 93520 146729 1 59 24394059 25165824 4635 130560 0 16420441 99.793 18348877 2117 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 06:34:24] CVMFS is ok
[2025-06-03 06:34:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 06:34:24] Checking for apptainer binary...
[2025-06-03 06:34:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 06:34:24] Running /usr/bin/apptainer --version
[2025-06-03 06:34:24] apptainer version 1.3.2-1.el7
[2025-06-03 06:34:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:34:35] cg-vwn269.simple-grid.lan
[2025-06-03 06:34:35] apptainer works
[2025-06-03 06:34:35] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:34:35] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:34:35] Starting ATLAS job with PandaID=6677384018
[2025-06-03 06:34:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:40:41]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:40:41] 2025-06-03 08:22:42,168 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:40:41] 2025-06-03 08:22:42,169 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:40:41] 2025-06-03 08:22:42,169 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:40:41] 2025-06-03 08:22:42,174 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:40:41] 2025-06-03 08:22:42,175 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,177 | INFO     | sum of deviations: 22403108025.999992
[2025-06-03 10:40:41] 2025-06-03 08:22:42,177 | INFO     | mean x: 1748932414.5
[2025-06-03 10:40:41] 2025-06-03 08:22:42,177 | INFO     | mean y: 2513053.254716981
[2025-06-03 10:40:41] 2025-06-03 08:22:42,177 | INFO     | -- intersect: -13259362747.410807
[2025-06-03 10:40:41] 2025-06-03 08:22:42,177 | INFO     | intersect: -13259362747.410807
[2025-06-03 10:40:41] 2025-06-03 08:22:42,178 | INFO     | chi2: 7.521385028922723
[2025-06-03 10:40:41] 2025-06-03 08:22:42,178 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,180 | INFO     | sum of deviations: 37288619300.999985
[2025-06-03 10:40:41] 2025-06-03 08:22:42,180 | INFO     | mean x: 1748932262.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,180 | INFO     | mean y: 2523973.053140097
[2025-06-03 10:40:41] 2025-06-03 08:22:42,181 | INFO     | -- intersect: -23709573264.46893
[2025-06-03 10:40:41] 2025-06-03 08:22:42,181 | INFO     | intersect: -23709573264.46893
[2025-06-03 10:40:41] 2025-06-03 08:22:42,181 | INFO     | chi2: 6.822985283000181
[2025-06-03 10:40:41] 2025-06-03 08:22:42,181 | INFO     | current chi2=6.822985283000181 (change=9.28552046248021 %)
[2025-06-03 10:40:41] 2025-06-03 08:22:42,181 | INFO     | right removable region: 206
[2025-06-03 10:40:41] 2025-06-03 08:22:42,182 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,188 | INFO     | sum of deviations: -53406259877.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,188 | INFO     | mean x: 1748932567.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,188 | INFO     | mean y: 2569634.415458937
[2025-06-03 10:40:41] 2025-06-03 08:22:42,188 | INFO     | -- intersect: 33963994645.06352
[2025-06-03 10:40:41] 2025-06-03 08:22:42,189 | INFO     | intersect: 33963994645.06352
[2025-06-03 10:40:41] 2025-06-03 08:22:42,189 | INFO     | chi2: 2.5121226252576476
[2025-06-03 10:40:41] 2025-06-03 08:22:42,189 | INFO     | current chi2=2.5121226252576476 (change=66.60026556814292 %)
[2025-06-03 10:40:41] 2025-06-03 08:22:42,190 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 10:40:41] 2025-06-03 08:22:42,191 | INFO     | sum of deviations: -90949909838.50002
[2025-06-03 10:40:41] 2025-06-03 08:22:42,191 | INFO     | mean x: 1748932719.5
[2025-06-03 10:40:41] 2025-06-03 08:22:42,192 | INFO     | mean y: 2598874.49009901
[2025-06-03 10:40:41] 2025-06-03 08:22:42,192 | INFO     | -- intersect: 62240291989.38176
[2025-06-03 10:40:41] 2025-06-03 08:22:42,192 | INFO     | intersect: 62240291989.38176
[2025-06-03 10:40:41] 2025-06-03 08:22:42,192 | INFO     | chi2: 1.0016900706542602
[2025-06-03 10:40:41] 2025-06-03 08:22:42,192 | INFO     | current chi2=1.0016900706542602 (change=60.12574941274911 %)
[2025-06-03 10:40:41] 2025-06-03 08:22:42,193 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,200 | INFO     | sum of deviations: -90512629783.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,201 | INFO     | mean x: 1748932872.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,201 | INFO     | mean y: 2598472.3147208123
[2025-06-03 10:40:41] 2025-06-03 08:22:42,201 | INFO     | -- intersect: 66777985222.33315
[2025-06-03 10:40:41] 2025-06-03 08:22:42,201 | INFO     | intersect: 66777985222.33315
[2025-06-03 10:40:41] 2025-06-03 08:22:42,202 | INFO     | chi2: 0.9671237422883368
[2025-06-03 10:40:41] 2025-06-03 08:22:42,202 | INFO     | current chi2=0.9671237422883368 (change=3.450800739528767 %)
[2025-06-03 10:40:41] 2025-06-03 08:22:42,202 | INFO     | left removable region: 30
[2025-06-03 10:40:41] 2025-06-03 08:22:42,202 | INFO     | sum of square deviations: 1690450300.0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,204 | INFO     | sum of deviations: -61478664102.5
[2025-06-03 10:40:41] 2025-06-03 08:22:42,204 | INFO     | mean x: 1748933146.5
[2025-06-03 10:40:41] 2025-06-03 08:22:42,204 | INFO     | mean y: 2601323.403409091
[2025-06-03 10:40:41] 2025-06-03 08:22:42,204 | INFO     | -- intersect: 63608182304.63777
[2025-06-03 10:40:41] 2025-06-03 08:22:42,204 | INFO     | intersect: 63608182304.63777
[2025-06-03 10:40:41] 2025-06-03 08:22:42,204 | INFO     | chi2: 0.1679217946592207
[2025-06-03 10:40:41] 2025-06-03 08:22:42,205 | INFO     | -- intersect: 63608182304.63777
[2025-06-03 10:40:41] 2025-06-03 08:22:42,205 | INFO     | current memory leak: -36.37 B/s (using 176 data points, chi2=0.17)
[2025-06-03 10:40:41] 2025-06-03 08:22:42,206 | INFO     | ..............................
[2025-06-03 10:40:41] 2025-06-03 08:22:42,206 | INFO     | . Timing measurements:
[2025-06-03 10:40:41] 2025-06-03 08:22:42,206 | INFO     | . get job = 0 s
[2025-06-03 10:40:41] 2025-06-03 08:22:42,206 | INFO     | . initial setup = 7 s
[2025-06-03 10:40:41] 2025-06-03 08:22:42,206 | INFO     | . payload setup = 163 s
[2025-06-03 10:40:41] 2025-06-03 08:22:42,206 | INFO     | . stage-in = 0 s
[2025-06-03 10:40:41] 2025-06-03 08:22:42,206 | INFO     | . payload execution = 13046 s
[2025-06-03 10:40:41] 2025-06-03 08:22:42,207 | INFO     | . stage-out = 6 s
[2025-06-03 10:40:41] 2025-06-03 08:22:42,207 | INFO     | . log creation = 1 s
[2025-06-03 10:40:41] 2025-06-03 08:22:42,207 | INFO     | ..............................
[2025-06-03 10:40:41] 2025-06-03 08:22:42,738 | INFO     | 
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | job summary report
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | --------------------------------------------------
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | PanDA job id: 6677384018
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | task id: 45006595
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | errors: (none)
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | pilot state: finished 
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | transexitcode: 0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,739 | INFO     | exeerrorcode: 0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | exeerrordiag: 
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | exitcode: 0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | exitmsg: OK
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | cpuconsumptiontime: 48629 s
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | nevents: 400
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | neventsw: 0
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | pid: 13530
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | pgrp: 13530
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | corecount: 8
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | event service: False
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | sizes: {0: 2404346, 1: 2405203, 2: 2405231, 12: 2405231, 23: 2405259, 34: 2405287, 45: 2405443, 55: 2405471, 66: 2405499, 77: 2405527, 88: 2405583, 93: 2406097, 98
[2025-06-03 10:40:41] 2025-06-03 08:22:42,740 | INFO     | --------------------------------------------------
[2025-06-03 10:40:41] 2025-06-03 08:22:42,741 | INFO     | 
[2025-06-03 10:40:41] 2025-06-03 08:22:42,741 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 10:40:41] 2025-06-03 08:22:43,184 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,186 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,186 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:40:41] 2025-06-03 08:22:43,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:40:41] 2025-06-03 08:22:43,186 | INFO     | job 6677384018 has completed (purged errors)
[2025-06-03 10:40:41] 2025-06-03 08:22:43,186 | INFO     | overall cleanup function is called
[2025-06-03 10:40:41] 2025-06-03 08:22:44,194 | INFO     | --- collectZombieJob: --- 10, [13530]
[2025-06-03 10:40:41] 2025-06-03 08:22:44,195 | INFO     | zombie collector waiting for pid 13530
[2025-06-03 10:40:41] 2025-06-03 08:22:44,195 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:40:41] 2025-06-03 08:22:44,195 | INFO     | collected zombie processes
[2025-06-03 10:40:41] 2025-06-03 08:22:44,195 | INFO     | will attempt to kill all subprocesses of pid=13530
[2025-06-03 10:40:41] 2025-06-03 08:22:44,316 | INFO     | process IDs to be killed: [13530] (in reverse order)
[2025-06-03 10:40:41] 2025-06-03 08:22:44,785 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:40:41] 2025-06-03 08:22:44,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:40:41] 2025-06-03 08:22:44,789 | INFO     | did not find any defunct processes belonging to 13530
[2025-06-03 10:40:41] 2025-06-03 08:22:44,791 | INFO     | did not find any defunct processes belonging to 13530
[2025-06-03 10:40:41] 2025-06-03 08:22:44,791 | INFO     | ready for new job
[2025-06-03 10:40:41] 2025-06-03 08:22:44,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:40:41] 2025-06-03 08:22:44,793 | INFO     | **************************************
[2025-06-03 10:40:41] 2025-06-03 08:22:44,794 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:40:41] 2025-06-03 08:22:44,794 | INFO     | **************************************
[2025-06-03 10:40:41] 2025-06-03 08:22:44,794 | INFO     | 
[2025-06-03 10:40:41] 2025-06-03 08:22:44,794 | INFO     | pilot is running in a VM
[2025-06-03 10:40:41] 2025-06-03 08:22:44,794 | INFO     | architecture information:
[2025-06-03 10:40:41] 2025-06-03 08:22:44,802 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:40:41] 2025-06-03 08:22:44,938 | INFO     | cat /etc/os-release:
[2025-06-03 10:40:41] NAME="CentOS Linux"
[2025-06-03 10:40:41] VERSION="7 (Core)"
[2025-06-03 10:40:41] ID="centos"
[2025-06-03 10:40:41] ID_LIKE="rhel fedora"
[2025-06-03 10:40:41] VERSION_ID="7"
[2025-06-03 10:40:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:40:41] ANSI_COLOR="0;31"
[2025-06-03 10:40:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:40:41] HOME_URL="https://www.centos.org/"
[2025-06-03 10:40:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:40:41] 
[2025-06-03 10:40:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:40:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:40:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:40:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:40:41] 
[2025-06-03 10:40:41] 2025-06-03 08:22:44,938 | INFO     | **************************************
[2025-06-03 10:40:41] 2025-06-03 08:22:45,442 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 10:40:41] 2025-06-03 08:22:45,582 | INFO     | sufficient remaining disk space (496762880000 B)
[2025-06-03 10:40:41] 2025-06-03 08:22:45,583 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:40:41] 2025-06-03 08:22:45,583 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:40:41] 2025-06-03 08:22:45,583 | INFO     | update_server=False
[2025-06-03 10:40:41] 2025-06-03 08:22:45,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:40:41] 2025-06-03 08:22:45,583 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:40:41] 2025-06-03 08:22:45,584 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:40:41] 2025-06-03 08:22:45,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:40:41] 2025-06-03 08:22:45,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:40:41] 2025-06-03 08:22:45,727 | INFO     | all data control threads have been joined
[2025-06-03 10:40:41] 2025-06-03 08:22:45,923 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 10:40:41] 2025-06-03 08:22:45,924 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 10:40:41] 2025-06-03 08:22:45,924 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:40:41] 2025-06-03 08:22:45,924 | INFO     | will abort loop
[2025-06-03 10:40:41] 2025-06-03 08:22:46,081 | INFO     | all job control threads have been joined
[2025-06-03 10:40:41] 2025-06-03 08:22:46,257 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:40:41] 2025-06-03 08:22:46,362 | INFO     | all payload control threads have been joined
[2025-06-03 10:40:41] 2025-06-03 08:22:46,589 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:46,637 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:46,682 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:46,734 | INFO     | [data] control thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:46,930 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:47,087 | INFO     | [job] control thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:47,130 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:47,135 | INFO     | [job] validate thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:47,148 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:47,165 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:47,369 | INFO     | [payload] control thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:47,381 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:40:41] 2025-06-03 08:22:47,887 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:48,162 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:48,265 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:48,388 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:48,898 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:40:41] 2025-06-03 08:22:52,908 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:40:41] 2025-06-03 08:22:54,792 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139771535288128)>', '<ExcThread(monitor, started 139771070355200)>']
[2025-06-03 10:40:41] 2025-06-03 08:22:55,644 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:40:41] 2025-06-03 08:22:55,645 | INFO     | [monitor] control thread has ended
[2025-06-03 10:40:41] 2025-06-03 08:22:59,817 | INFO     | all workflow threads have been joined
[2025-06-03 10:40:41] 2025-06-03 08:22:59,818 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:40:41] 2025-06-03 08:22:59,818 | INFO     | traces error code: 0
[2025-06-03 10:40:41] 2025-06-03 08:22:59,818 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:40:41] 2025-06-03 08:23:00,251 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:40:41] 2025-06-03 08:23:00,341 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:40:41] 2025-06-03 08:23:00,445 [wrapper] pilotpid: 2923
[2025-06-03 10:40:41] 2025-06-03 08:23:00,549 [wrapper] Pilot exit status: 0
[2025-06-03 10:40:41] 2025-06-03 08:23:00,857 [wrapper] pandaids: 6677384018
[2025-06-03 10:40:41] 2025-06-03 08:23:01,646 [wrapper] cleanup supervisor_pilot 23838 2924
[2025-06-03 10:40:41] 2025-06-03 08:23:01,727 [wrapper] Test setup, not cleaning
[2025-06-03 10:40:41] 2025-06-03 08:23:01,795 [wrapper] apfmon messages muted
[2025-06-03 10:40:41] 2025-06-03 08:23:01,873 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:40:41] 2025-06-03 08:23:01,907 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:40:41]  *** Error codes and diagnostics ***
[2025-06-03 10:40:41]     "exeErrorCode": 0,
[2025-06-03 10:40:41]     "exeErrorDiag": "",
[2025-06-03 10:40:41]     "pilotErrorCode": 0,
[2025-06-03 10:40:41]     "pilotErrorDiag": "",
[2025-06-03 10:40:41]  *** Listing of results directory ***
[2025-06-03 10:40:41] total 392728
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:11 pilot3.tar.gz
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:39 queuedata.json
[2025-06-03 10:40:41] -rwx------. 1 boinc boinc     37140 Jun  2 18:39 runpilot2-wrapper.sh
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc       100 Jun  3 06:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:40:41] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 06:34 run_atlas
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc       105 Jun  3 06:34 job.xml
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc      6392 Jun  3 06:34 init_data.xml
[2025-06-03 10:40:41] -rw-r--r--. 2 boinc boinc 215576490 Jun  3 06:34 EVNT.45006593._000159.pool.root.1
[2025-06-03 10:40:41] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:34 start_atlas.sh
[2025-06-03 10:40:41] drwxrwx--x. 2 boinc boinc        68 Jun  3 06:34 shared
[2025-06-03 10:40:41] -rw-r--r--. 2 boinc boinc    508877 Jun  3 06:34 input.tar.gz
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc         0 Jun  3 06:34 boinc_lockfile
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc      2519 Jun  3 06:34 pandaJob.out
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc    988073 Jun  3 06:37 agis_schedconf.cvmfs.json
[2025-06-03 10:40:41] drwx------. 4 boinc boinc      4096 Jun  3 06:37 pilot3
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc 179699183 Jun  3 10:20 HITS.45006595._003955.pool.root.1
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:20 boinc_task_state.xml
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc      1015 Jun  3 10:21 memory_monitor_summary.json
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc   1603667 Jun  3 10:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc    366455 Jun  3 10:21 log.45006595._003955.job.log.tgz.1
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc        95 Jun  3 10:21 pilot_heartbeat.json
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc      7692 Jun  3 10:22 heartbeat.json
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc      4726 Jun  3 10:22 pilotlog.txt
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc   1155699 Jun  3 10:23 log.45006595._003955.job.log.1
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc       357 Jun  3 10:23 output.list
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:23 runtime_log
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc   1546240 Jun  3 10:23 result.tar.gz
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc       656 Jun  3 10:23 tqxLDmtMNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWSfKDmFOFDDo.diag
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc      8673 Jun  3 10:23 runtime_log.err
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:40 boinc_mmap_file
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:40 wrapper_checkpoint.txt
[2025-06-03 10:40:41] -rw-r--r--. 1 boinc boinc     20524 Jun  3 10:40 stderr.txt
[2025-06-03 10:40:41] HITS file was successfully produced:
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc 179699183 Jun  3 10:20 shared/HITS.pool.root.1
[2025-06-03 10:40:41]  *** Contents of shared directory: ***
[2025-06-03 10:40:41] total 388040
[2025-06-03 10:40:41] -rw-r--r--. 2 boinc boinc 215576490 Jun  3 06:34 ATLAS.root_0
[2025-06-03 10:40:41] -rw-r--r--. 2 boinc boinc     15093 Jun  3 06:34 start_atlas.sh
[2025-06-03 10:40:41] -rw-r--r--. 2 boinc boinc    508877 Jun  3 06:34 input.tar.gz
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc 179699183 Jun  3 10:20 HITS.pool.root.1
[2025-06-03 10:40:41] -rw-------. 1 boinc boinc   1546240 Jun  3 10:23 result.tar.gz
10:40:43 (30561): run_atlas exited; CPU time 48807.229052
10:40:43 (30561): called boinc_finish(0)

</stderr_txt>
]]>

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