Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:00:15 (2826286): wrapper (7.7.26015): starting
16:00:15 (2826286): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 16:00:15] Arguments: --nthreads 8
[2025-06-02 16:00:15] Threads: 8
[2025-06-02 16:00:15] Checking for CVMFS
[2025-06-02 16:00:15] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 16:00:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 16:00:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 16:00:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 16:00:15] 2.12.6.0 7975 30361 263688 146717 2 271 28516257 32935937 14574 16776704 1 272056352 99.640 253491353 22201 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-06-02 16:00:15] CVMFS is ok
[2025-06-02 16:00:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 16:00:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 16:00:15] Further information can be found at the LHC@home message board.
[2025-06-02 16:00:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 16:00:15] Checking for apptainer binary...
[2025-06-02 16:00:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 16:00:15] Running /usr/bin/apptainer --version
[2025-06-02 16:00:15] apptainer version 1.4.1-1.el9
[2025-06-02 16:00:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 16:00:16] c7-3-17.aglt2.org
[2025-06-02 16:00:16] apptainer works
[2025-06-02 16:00:16] Set ATHENA_PROC_NUMBER=8
[2025-06-02 16:00:16] Set ATHENA_CORE_NUMBER=8
[2025-06-02 16:00:16] Starting ATLAS job with PandaID=6677380708
[2025-06-02 16:00:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 17:36:46]  *** The last 200 lines of the pilot log: ***
[2025-06-02 17:36:46]  guid=41c2cc79-8edb-4ff3-8fea-d3fc2cbaa79b
[2025-06-02 17:36:46]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2025-06-02 17:36:46]  is_altstaged=None
[2025-06-02 17:36:46]  is_tar=False
[2025-06-02 17:36:46]  lfn=log.45006595._002340.job.log.tgz.1
[2025-06-02 17:36:46]  mtime=0
[2025-06-02 17:36:46]  protocol_id=None
[2025-06-02 17:36:46]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-02 17:36:46]  replicas=None
[2025-06-02 17:36:46]  scope=mc23_13p6TeV
[2025-06-02 17:36:46]  status=None
[2025-06-02 17:36:46]  status_code=0
[2025-06-02 17:36:46]  storage_token=
[2025-06-02 17:36:46]  surl=/tmp/boinchome/slots/7/PanDA_Pilot-6677380708/log.45006595._002340.job.log.tgz.1
[2025-06-02 17:36:46]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/a4/log.45006595._002340.job.log.tgz.1
[2025-06-02 17:36:46]  workdir=None
[2025-06-02 17:36:46] ]
[2025-06-02 17:36:46] 2025-06-02 21:36:21,521 | INFO     | transferring file log.45006595._002340.job.log.tgz.1 from /tmp/boinchome/slots/7/PanDA_Pilot-6677380708/log.45006595._002340.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-06-02 17:36:46] 2025-06-02 21:36:21,521 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/7/PanDA_Pilot-6677380708/log.45006595._002340.job.log.tgz.1 /tmp/boinchome/slots/7/log.45006595._002340.job
[2025-06-02 17:36:46] 2025-06-02 21:36:21,535 | INFO     | adding to output.list: log.45006595._002340.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/a4/log.45006595._002340.job.log.tg
[2025-06-02 17:36:46] 2025-06-02 21:36:21,536 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-02 17:36:46] 2025-06-02 21:36:21,536 | INFO     | summary of transferred files:
[2025-06-02 17:36:46] 2025-06-02 21:36:21,536 | INFO     |  -- lfn=log.45006595._002340.job.log.tgz.1, status_code=0, status=transferred
[2025-06-02 17:36:46] 2025-06-02 21:36:21,536 | INFO     | stage-out finished correctly
[2025-06-02 17:36:46] 2025-06-02 21:36:22,805 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-02 17:36:46] 2025-06-02 21:36:22,947 | INFO     | job 6677380708 has state=finished
[2025-06-02 17:36:46] 2025-06-02 21:36:22,948 | INFO     | preparing for final server update for job 6677380708 in state='finished'
[2025-06-02 17:36:46] 2025-06-02 21:36:22,948 | INFO     | this job has now completed (state=finished)
[2025-06-02 17:36:46] 2025-06-02 21:36:22,948 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-02 17:36:46] 2025-06-02 21:36:22,949 | INFO     | log transfer has been attempted: DONE
[2025-06-02 17:36:46] 2025-06-02 21:36:22,949 | INFO     | job 6677380708 has finished - writing final server update
[2025-06-02 17:36:46] 2025-06-02 21:36:22,949 | INFO     | total number of processed events: 400 (read)
[2025-06-02 17:36:46] 2025-06-02 21:36:22,968 | INFO     | executing command: lscpu
[2025-06-02 17:36:46] 2025-06-02 21:36:23,076 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-02 17:36:46] 2025-06-02 21:36:23,875 | INFO     | PID=2830538 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-02 17:36:46] 2025-06-02 21:36:23,876 | INFO     | .. there are 14 such processes running
[2025-06-02 17:36:46] 2025-06-02 21:36:25,124 | WARNING  | process 2837671 can no longer be monitored (due to stat problems) - aborting
[2025-06-02 17:36:46] 2025-06-02 21:36:25,124 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677380708/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 17:36:46] 2025-06-02 21:36:25,590 | INFO     | number of running child processes to parent process 2837671: 1
[2025-06-02 17:36:46] 2025-06-02 21:36:25,591 | INFO     | maximum number of monitored processes: 6
[2025-06-02 17:36:46] 2025-06-02 21:36:27,221 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-02 17:36:46] 2025-06-02 21:36:27,224 | INFO     | using path: /tmp/boinchome/slots/7/PanDA_Pilot-6677380708/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 17:36:46] 2025-06-02 21:36:27,225 | INFO     | extracted standard info from prmon json
[2025-06-02 17:36:46] 2025-06-02 21:36:27,225 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 17:36:46] 2025-06-02 21:36:27,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 17:36:46] 2025-06-02 21:36:27,226 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 17:36:46] 2025-06-02 21:36:27,226 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 17:36:46] 2025-06-02 21:36:27,228 | INFO     | fitting pss+swap vs Time
[2025-06-02 17:36:46] 2025-06-02 21:36:27,229 | INFO     | sum of square deviations: 197203697.5
[2025-06-02 17:36:46] 2025-06-02 21:36:27,229 | INFO     | sum of deviations: 5115729254.0
[2025-06-02 17:36:46] 2025-06-02 21:36:27,229 | INFO     | mean x: 1748897424.5
[2025-06-02 17:36:46] 2025-06-02 21:36:27,229 | INFO     | mean y: 2133050.8604651163
[2025-06-02 17:36:46] 2025-06-02 21:36:27,229 | INFO     | -- intersect: -45366619311.1986
[2025-06-02 17:36:46] 2025-06-02 21:36:27,229 | INFO     | intersect: -45366619311.1986
[2025-06-02 17:36:46] 2025-06-02 21:36:27,230 | INFO     | chi2: 0.11032530476324083
[2025-06-02 17:36:46] 2025-06-02 21:36:27,230 | INFO     | -- intersect: -45366619311.1986
[2025-06-02 17:36:46] 2025-06-02 21:36:27,230 | INFO     | current memory leak: 25.94 B/s (using 86 data points, chi2=0.11)
[2025-06-02 17:36:46] 2025-06-02 21:36:27,230 | INFO     | ..............................
[2025-06-02 17:36:46] 2025-06-02 21:36:27,230 | INFO     | . Timing measurements:
[2025-06-02 17:36:46] 2025-06-02 21:36:27,231 | INFO     | . get job = 0 s
[2025-06-02 17:36:46] 2025-06-02 21:36:27,231 | INFO     | . initial setup = 3 s
[2025-06-02 17:36:46] 2025-06-02 21:36:27,231 | INFO     | . payload setup = 30 s
[2025-06-02 17:36:46] 2025-06-02 21:36:27,231 | INFO     | . stage-in = 0 s
[2025-06-02 17:36:46] 2025-06-02 21:36:27,231 | INFO     | . payload execution = 5663 s
[2025-06-02 17:36:46] 2025-06-02 21:36:27,231 | INFO     | . stage-out = 0 s
[2025-06-02 17:36:46] 2025-06-02 21:36:27,231 | INFO     | . log creation = 0 s
[2025-06-02 17:36:46] 2025-06-02 21:36:27,231 | INFO     | ..............................
[2025-06-02 17:36:46] 2025-06-02 21:36:27,326 | INFO     | 
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | job summary report
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | --------------------------------------------------
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | PanDA job id: 6677380708
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | task id: 45006595
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | errors: (none)
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | pilot state: finished 
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | transexitcode: 0
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | exeerrorcode: 0
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | exeerrordiag: 
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | exitcode: 0
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | exitmsg: OK
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | cpuconsumptiontime: 28571 s
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | nevents: 400
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | neventsw: 0
[2025-06-02 17:36:46] 2025-06-02 21:36:27,327 | INFO     | pid: 2837671
[2025-06-02 17:36:46] 2025-06-02 21:36:27,328 | INFO     | pgrp: 2837671
[2025-06-02 17:36:46] 2025-06-02 21:36:27,328 | INFO     | corecount: 8
[2025-06-02 17:36:46] 2025-06-02 21:36:27,328 | INFO     | event service: False
[2025-06-02 17:36:46] 2025-06-02 21:36:27,328 | INFO     | sizes: {0: 2405005, 1: 2405204, 11: 2405204, 15: 2405438, 22: 2405466, 5697: 2432064, 5700: 2441005, 5701: 2441061, 5705: 2441231}
[2025-06-02 17:36:46] 2025-06-02 21:36:27,328 | INFO     | --------------------------------------------------
[2025-06-02 17:36:46] 2025-06-02 21:36:27,328 | INFO     | 
[2025-06-02 17:36:46] 2025-06-02 21:36:27,328 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-06-02 17:36:46] 2025-06-02 21:36:27,352 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,353 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,354 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,354 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,354 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 17:36:46] 2025-06-02 21:36:27,354 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,354 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 17:36:46] 2025-06-02 21:36:27,354 | INFO     | job 6677380708 has completed (purged errors)
[2025-06-02 17:36:46] 2025-06-02 21:36:27,354 | INFO     | overall cleanup function is called
[2025-06-02 17:36:46] 2025-06-02 21:36:28,362 | INFO     | --- collectZombieJob: --- 10, [2837671]
[2025-06-02 17:36:46] 2025-06-02 21:36:28,363 | INFO     | zombie collector waiting for pid 2837671
[2025-06-02 17:36:46] 2025-06-02 21:36:28,363 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 17:36:46] 2025-06-02 21:36:28,363 | INFO     | collected zombie processes
[2025-06-02 17:36:46] 2025-06-02 21:36:28,363 | INFO     | will attempt to kill all subprocesses of pid=2837671
[2025-06-02 17:36:46] 2025-06-02 21:36:28,808 | INFO     | process IDs to be killed: [2837671] (in reverse order)
[2025-06-02 17:36:46] 2025-06-02 21:36:28,953 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 17:36:46] 2025-06-02 21:36:28,953 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 17:36:46] 2025-06-02 21:36:28,973 | INFO     | did not find any defunct processes belonging to 2837671
[2025-06-02 17:36:46] 2025-06-02 21:36:28,991 | INFO     | did not find any defunct processes belonging to 2837671
[2025-06-02 17:36:46] 2025-06-02 21:36:28,992 | INFO     | ready for new job
[2025-06-02 17:36:46] 2025-06-02 21:36:28,992 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 17:36:46] 2025-06-02 21:36:28,995 | INFO     | **************************************
[2025-06-02 17:36:46] 2025-06-02 21:36:28,995 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 17:36:46] 2025-06-02 21:36:28,995 | INFO     | **************************************
[2025-06-02 17:36:46] 2025-06-02 21:36:28,995 | INFO     | 
[2025-06-02 17:36:46] 2025-06-02 21:36:29,016 | INFO     | architecture information:
[2025-06-02 17:36:46] 2025-06-02 21:36:29,018 | INFO     | executing command: cat /etc/os-release
[2025-06-02 17:36:46] 2025-06-02 21:36:29,036 | INFO     | cat /etc/os-release:
[2025-06-02 17:36:46] NAME="CentOS Linux"
[2025-06-02 17:36:46] VERSION="7 (Core)"
[2025-06-02 17:36:46] ID="centos"
[2025-06-02 17:36:46] ID_LIKE="rhel fedora"
[2025-06-02 17:36:46] VERSION_ID="7"
[2025-06-02 17:36:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 17:36:46] ANSI_COLOR="0;31"
[2025-06-02 17:36:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 17:36:46] HOME_URL="https://www.centos.org/"
[2025-06-02 17:36:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 17:36:46] 
[2025-06-02 17:36:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 17:36:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 17:36:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 17:36:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 17:36:46] 
[2025-06-02 17:36:46] 2025-06-02 21:36:29,037 | INFO     | **************************************
[2025-06-02 17:36:46] 2025-06-02 21:36:29,540 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-06-02 17:36:46] 2025-06-02 21:36:29,563 | INFO     | sufficient remaining disk space (70556581888 B)
[2025-06-02 17:36:46] 2025-06-02 21:36:29,564 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 17:36:46] 2025-06-02 21:36:29,564 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 17:36:46] 2025-06-02 21:36:29,564 | INFO     | update_server=False
[2025-06-02 17:36:46] 2025-06-02 21:36:29,564 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 17:36:46] 2025-06-02 21:36:29,565 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:36:46] 2025-06-02 21:36:29,565 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 17:36:46] 2025-06-02 21:36:29,565 | INFO     | aborting loop
[2025-06-02 17:36:46] 2025-06-02 21:36:29,610 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 17:36:46] 2025-06-02 21:36:29,664 | INFO     | all data control threads have been joined
[2025-06-02 17:36:46] 2025-06-02 21:36:29,778 | INFO     | all payload control threads have been joined
[2025-06-02 17:36:46] 2025-06-02 21:36:29,893 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 17:36:46] 2025-06-02 21:36:29,893 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 17:36:46] 2025-06-02 21:36:29,893 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 17:36:46] 2025-06-02 21:36:30,504 | INFO     | all job control threads have been joined
[2025-06-02 17:36:46] 2025-06-02 21:36:30,566 | INFO     | [job] retrieve thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:30,571 | INFO     | [job] job monitor thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:30,670 | INFO     | [data] control thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:30,713 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:30,714 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:30,755 | INFO     | [job] validate thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:30,784 | INFO     | [payload] control thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:30,988 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:31,328 | INFO     | [data] copytool_in thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:31,510 | INFO     | [job] control thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:31,615 | INFO     | [data] copytool_out thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:31,751 | INFO     | [payload] validate_post thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:32,156 | INFO     | [payload] failed_post thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:32,337 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 17:36:46] 2025-06-02 21:36:33,343 | INFO     | [job] queue monitor thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:33,575 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:39,869 | INFO     | job.realtimelogging is not enabled
[2025-06-02 17:36:46] 2025-06-02 21:36:40,875 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 17:36:46] 2025-06-02 21:36:41,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243231500096)>', '<ExcThread(monitor, started 140242745022208)>']
[2025-06-02 17:36:46] 2025-06-02 21:36:41,944 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 17:36:46] 2025-06-02 21:36:41,945 | INFO     | [monitor] control thread has ended
[2025-06-02 17:36:46] 2025-06-02 21:36:46,445 | INFO     | all workflow threads have been joined
[2025-06-02 17:36:46] 2025-06-02 21:36:46,446 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 17:36:46] 2025-06-02 21:36:46,446 | INFO     | traces error code: 0
[2025-06-02 17:36:46] 2025-06-02 21:36:46,447 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 17:36:46] 2025-06-02 21:36:46,620 [wrapper] ==== pilot stdout END ====
[2025-06-02 17:36:46] 2025-06-02 21:36:46,623 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 17:36:46] 2025-06-02 21:36:46,626 [wrapper] pilotpid: 2830538
[2025-06-02 17:36:46] 2025-06-02 21:36:46,629 [wrapper] Pilot exit status: 0
[2025-06-02 17:36:46] 2025-06-02 21:36:46,641 [wrapper] pandaids: 6677380708
[2025-06-02 17:36:46] 2025-06-02 21:36:46,747 [wrapper] cleanup supervisor_pilot 3255205 2830539
[2025-06-02 17:36:46] 2025-06-02 21:36:46,750 [wrapper] Test setup, not cleaning
[2025-06-02 17:36:46] 2025-06-02 21:36:46,753 [wrapper] apfmon messages muted
[2025-06-02 17:36:46] 2025-06-02 21:36:46,756 [wrapper] ==== wrapper stdout END ====
[2025-06-02 17:36:46] 2025-06-02 21:36:46,759 [wrapper] ==== wrapper stderr END ====
[2025-06-02 17:36:46]  *** Error codes and diagnostics ***
[2025-06-02 17:36:46]     "exeErrorCode": 0,
[2025-06-02 17:36:46]     "exeErrorDiag": "",
[2025-06-02 17:36:46]     "pilotErrorCode": 0,
[2025-06-02 17:36:46]     "pilotErrorDiag": "",
[2025-06-02 17:36:46]  *** Listing of results directory ***
[2025-06-02 17:36:46] total 394364
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas    495897 Jun  2 11:48 pilot3.tar.gz
[2025-06-02 17:36:46] -rwx------. 1 boincer umatlas     37140 Jun  2 11:51 runpilot2-wrapper.sh
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas      5111 Jun  2 11:53 queuedata.json
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas       100 Jun  2 16:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 17:36:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jun  2 16:00 run_atlas
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas       105 Jun  2 16:00 job.xml
[2025-06-02 17:36:46] -rw-r--r--. 2 boincer umatlas 217050062 Jun  2 16:00 EVNT.45006593._000094.pool.root.1
[2025-06-02 17:36:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 16:00 start_atlas.sh
[2025-06-02 17:36:46] drwxrwx--x. 2 boincer umatlas      4096 Jun  2 16:00 shared
[2025-06-02 17:36:46] -rw-r--r--. 2 boincer umatlas    508874 Jun  2 16:00 input.tar.gz
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas         0 Jun  2 16:00 boinc_lockfile
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas      2521 Jun  2 16:00 pandaJob.out
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas    988356 Jun  2 16:00 agis_schedconf.cvmfs.json
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas   1603667 Jun  2 16:00 agis_ddmendpoints.agis.ALL.json
[2025-06-02 17:36:46] drwx------. 4 boincer umatlas      4096 Jun  2 16:00 pilot3
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas      6934 Jun  2 17:29 init_data.xml
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas 181218791 Jun  2 17:35 HITS.45006595._002340.pool.root.1
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas       529 Jun  2 17:35 boinc_task_state.xml
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas        95 Jun  2 17:36 pilot_heartbeat.json
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas      1029 Jun  2 17:36 memory_monitor_summary.json
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas    314987 Jun  2 17:36 log.45006595._002340.job.log.tgz.1
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas      7679 Jun  2 17:36 heartbeat.json
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas      8192 Jun  2 17:36 boinc_mmap_file
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas      4425 Jun  2 17:36 pilotlog.txt
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas        27 Jun  2 17:36 wrapper_checkpoint.txt
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas    545032 Jun  2 17:36 log.45006595._002340.job.log.1
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas       357 Jun  2 17:36 output.list
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas       620 Jun  2 17:36 runtime_log
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas    880640 Jun  2 17:36 result.tar.gz
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas       651 Jun  2 17:36 rvWNDm2cMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmJBfKDmRnmtIo.diag
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas      8654 Jun  2 17:36 runtime_log.err
[2025-06-02 17:36:46] -rw-r--r--. 1 boincer umatlas     21374 Jun  2 17:36 stderr.txt
[2025-06-02 17:36:46] HITS file was successfully produced:
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas 181218791 Jun  2 17:35 shared/HITS.pool.root.1
[2025-06-02 17:36:46]  *** Contents of shared directory: ***
[2025-06-02 17:36:46] total 390320
[2025-06-02 17:36:46] -rw-r--r--. 2 boincer umatlas 217050062 Jun  2 16:00 ATLAS.root_0
[2025-06-02 17:36:46] -rw-r--r--. 2 boincer umatlas     15093 Jun  2 16:00 start_atlas.sh
[2025-06-02 17:36:46] -rw-r--r--. 2 boincer umatlas    508874 Jun  2 16:00 input.tar.gz
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas 181218791 Jun  2 17:35 HITS.pool.root.1
[2025-06-02 17:36:46] -rw-------. 1 boincer umatlas    880640 Jun  2 17:36 result.tar.gz
17:36:48 (2826286): run_atlas exited; CPU time 28757.838578
17:36:48 (2826286): called boinc_finish(0)

</stderr_txt>
]]>

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