Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:09:24 (9514): wrapper (7.7.26015): starting
08:09:24 (9514): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:09:24] Arguments: --nthreads 8
[2025-06-03 08:09:24] Threads: 8
[2025-06-03 08:09:24] Checking for CVMFS
[2025-06-03 08:09:25] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:09:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:09:26] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:09:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:09:27] 2.11.2.0 9777 31411 89928 146729 3 16 13873639 25165824 4634 130560 0 16600403 99.888 16605985 1948 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:09:27] CVMFS is ok
[2025-06-03 08:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:09:27] Checking for apptainer binary...
[2025-06-03 08:09:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:09:27] Running /usr/bin/apptainer --version
[2025-06-03 08:09:27] apptainer version 1.3.2-1.el7
[2025-06-03 08:09:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:39:42] cg-vwn477.simple-grid.lan
[2025-06-03 08:39:42] apptainer works
[2025-06-03 08:39:42] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:39:42] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:39:42] Starting ATLAS job with PandaID=6677387761
[2025-06-03 08:39:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:15:02]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:15:02] 2025-06-03 10:13:19,066 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6677387761/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,067 | INFO     | extracted standard info from prmon json
[2025-06-03 12:15:02] 2025-06-03 10:13:19,067 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:15:02] 2025-06-03 10:13:19,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:15:02] 2025-06-03 10:13:19,068 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:15:02] 2025-06-03 10:13:19,068 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:15:02] 2025-06-03 10:13:19,072 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:15:02] 2025-06-03 10:13:19,072 | INFO     | sum of square deviations: 2370641658.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,074 | INFO     | sum of deviations: 71278262892.99998
[2025-06-03 12:15:02] 2025-06-03 10:13:19,074 | INFO     | mean x: 1748939468.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,074 | INFO     | mean y: 2410005.4416243653
[2025-06-03 12:15:02] 2025-06-03 10:13:19,074 | INFO     | -- intersect: -52583085893.258865
[2025-06-03 12:15:02] 2025-06-03 10:13:19,074 | INFO     | intersect: -52583085893.258865
[2025-06-03 12:15:02] 2025-06-03 10:13:19,075 | INFO     | chi2: 8.574820253102983
[2025-06-03 12:15:02] 2025-06-03 10:13:19,075 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,084 | INFO     | sum of deviations: 82445106869.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,084 | INFO     | mean x: 1748939315.5
[2025-06-03 12:15:02] 2025-06-03 10:13:19,084 | INFO     | mean y: 2419452.1041666665
[2025-06-03 12:15:02] 2025-06-03 10:13:19,084 | INFO     | -- intersect: -65698174693.204704
[2025-06-03 12:15:02] 2025-06-03 10:13:19,084 | INFO     | intersect: -65698174693.204704
[2025-06-03 12:15:02] 2025-06-03 10:13:19,085 | INFO     | chi2: 7.902404394027997
[2025-06-03 12:15:02] 2025-06-03 10:13:19,085 | INFO     | current chi2=7.902404394027997 (change=7.841748739067249 %)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,085 | INFO     | right removable region: 191
[2025-06-03 12:15:02] 2025-06-03 10:13:19,085 | INFO     | sum of square deviations: 2194675568.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,086 | INFO     | sum of deviations: 2967247979.499983
[2025-06-03 12:15:02] 2025-06-03 10:13:19,087 | INFO     | mean x: 1748939620.5
[2025-06-03 12:15:02] 2025-06-03 10:13:19,087 | INFO     | mean y: 2469166.7239583335
[2025-06-03 12:15:02] 2025-06-03 10:13:19,087 | INFO     | -- intersect: -2362134345.0038815
[2025-06-03 12:15:02] 2025-06-03 10:13:19,087 | INFO     | intersect: -2362134345.0038815
[2025-06-03 12:15:02] 2025-06-03 10:13:19,087 | INFO     | chi2: 3.316682855548817
[2025-06-03 12:15:02] 2025-06-03 10:13:19,087 | INFO     | current chi2=3.316682855548817 (change=61.320671948212514 %)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,088 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,089 | INFO     | sum of deviations: -42379267307.00003
[2025-06-03 12:15:02] 2025-06-03 10:13:19,089 | INFO     | mean x: 1748939773.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,089 | INFO     | mean y: 2510431.07486631
[2025-06-03 12:15:02] 2025-06-03 10:13:19,089 | INFO     | -- intersect: 36556726467.16871
[2025-06-03 12:15:02] 2025-06-03 10:13:19,089 | INFO     | intersect: 36556726467.16871
[2025-06-03 12:15:02] 2025-06-03 10:13:19,090 | INFO     | chi2: 1.05487910140851
[2025-06-03 12:15:02] 2025-06-03 10:13:19,090 | INFO     | current chi2=1.05487910140851 (change=68.19475520115844 %)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,090 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 12:15:02] 2025-06-03 10:13:19,091 | INFO     | sum of deviations: -45597179445.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,091 | INFO     | mean x: 1748939925.5
[2025-06-03 12:15:02] 2025-06-03 10:13:19,091 | INFO     | mean y: 2513422.5054945056
[2025-06-03 12:15:02] 2025-06-03 10:13:19,092 | INFO     | -- intersect: 42663745547.48424
[2025-06-03 12:15:02] 2025-06-03 10:13:19,092 | INFO     | intersect: 42663745547.48424
[2025-06-03 12:15:02] 2025-06-03 10:13:19,092 | INFO     | chi2: 0.9687902576648668
[2025-06-03 12:15:02] 2025-06-03 10:13:19,092 | INFO     | current chi2=0.9687902576648668 (change=8.161015193939704 %)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,092 | INFO     | left removable region: 30
[2025-06-03 12:15:02] 2025-06-03 10:13:19,093 | INFO     | sum of square deviations: 1294014960.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,094 | INFO     | sum of deviations: -14195413273.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,094 | INFO     | mean x: 1748940200.0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,099 | INFO     | mean y: 2505918.385093168
[2025-06-03 12:15:02] 2025-06-03 10:13:19,100 | INFO     | -- intersect: 19188473388.77916
[2025-06-03 12:15:02] 2025-06-03 10:13:19,100 | INFO     | intersect: 19188473388.77916
[2025-06-03 12:15:02] 2025-06-03 10:13:19,100 | INFO     | chi2: 0.11862284399348022
[2025-06-03 12:15:02] 2025-06-03 10:13:19,100 | INFO     | -- intersect: 19188473388.77916
[2025-06-03 12:15:02] 2025-06-03 10:13:19,100 | INFO     | current memory leak: -10.97 B/s (using 161 data points, chi2=0.12)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,101 | INFO     | ..............................
[2025-06-03 12:15:02] 2025-06-03 10:13:19,101 | INFO     | . Timing measurements:
[2025-06-03 12:15:02] 2025-06-03 10:13:19,102 | INFO     | . get job = 0 s
[2025-06-03 12:15:02] 2025-06-03 10:13:19,102 | INFO     | . initial setup = 10 s
[2025-06-03 12:15:02] 2025-06-03 10:13:19,102 | INFO     | . payload setup = 161 s
[2025-06-03 12:15:02] 2025-06-03 10:13:19,102 | INFO     | . stage-in = 0 s
[2025-06-03 12:15:02] 2025-06-03 10:13:19,102 | INFO     | . payload execution = 12150 s
[2025-06-03 12:15:02] 2025-06-03 10:13:19,102 | INFO     | . stage-out = 3 s
[2025-06-03 12:15:02] 2025-06-03 10:13:19,102 | INFO     | . log creation = 1 s
[2025-06-03 12:15:02] 2025-06-03 10:13:19,102 | INFO     | ..............................
[2025-06-03 12:15:02] 2025-06-03 10:13:19,293 | INFO     | 
[2025-06-03 12:15:02] 2025-06-03 10:13:19,293 | INFO     | job summary report
[2025-06-03 12:15:02] 2025-06-03 10:13:19,293 | INFO     | --------------------------------------------------
[2025-06-03 12:15:02] 2025-06-03 10:13:19,293 | INFO     | PanDA job id: 6677387761
[2025-06-03 12:15:02] 2025-06-03 10:13:19,293 | INFO     | task id: 45006595
[2025-06-03 12:15:02] 2025-06-03 10:13:19,293 | INFO     | errors: (none)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | pilot state: finished 
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | transexitcode: 0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | exeerrorcode: 0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | exeerrordiag: 
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | exitcode: 0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | exitmsg: OK
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | cpuconsumptiontime: 43806 s
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | nevents: 400
[2025-06-03 12:15:02] 2025-06-03 10:13:19,294 | INFO     | neventsw: 0
[2025-06-03 12:15:02] 2025-06-03 10:13:19,295 | INFO     | pid: 5349
[2025-06-03 12:15:02] 2025-06-03 10:13:19,295 | INFO     | pgrp: 5349
[2025-06-03 12:15:02] 2025-06-03 10:13:19,295 | INFO     | corecount: 8
[2025-06-03 12:15:02] 2025-06-03 10:13:19,295 | INFO     | event service: False
[2025-06-03 12:15:02] 2025-06-03 10:13:19,295 | INFO     | sizes: {0: 2404950, 1: 2405205, 12: 2405205, 23: 2405233, 34: 2405261, 44: 2405289, 55: 2405445, 66: 2405473, 76: 2405501, 85: 2405763, 87: 2405791, 12315: 2434991
[2025-06-03 12:15:02] 2025-06-03 10:13:19,295 | INFO     | --------------------------------------------------
[2025-06-03 12:15:02] 2025-06-03 10:13:19,295 | INFO     | 
[2025-06-03 12:15:02] 2025-06-03 10:13:19,295 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-06-03 12:15:02] 2025-06-03 10:13:19,827 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,827 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,827 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,827 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,827 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,827 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,827 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,827 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,828 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:15:02] 2025-06-03 10:13:19,829 | INFO     | job 6677387761 has completed (purged errors)
[2025-06-03 12:15:02] 2025-06-03 10:13:19,829 | INFO     | overall cleanup function is called
[2025-06-03 12:15:02] 2025-06-03 10:13:20,838 | INFO     | --- collectZombieJob: --- 10, [5349]
[2025-06-03 12:15:02] 2025-06-03 10:13:20,838 | INFO     | zombie collector waiting for pid 5349
[2025-06-03 12:15:02] 2025-06-03 10:13:20,839 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:15:02] 2025-06-03 10:13:20,839 | INFO     | collected zombie processes
[2025-06-03 12:15:02] 2025-06-03 10:13:20,839 | INFO     | will attempt to kill all subprocesses of pid=5349
[2025-06-03 12:15:02] 2025-06-03 10:13:20,981 | INFO     | process IDs to be killed: [5349] (in reverse order)
[2025-06-03 12:15:02] 2025-06-03 10:13:21,481 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:15:02] 2025-06-03 10:13:21,481 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:15:02] 2025-06-03 10:13:21,485 | INFO     | did not find any defunct processes belonging to 5349
[2025-06-03 12:15:02] 2025-06-03 10:13:21,488 | INFO     | did not find any defunct processes belonging to 5349
[2025-06-03 12:15:02] 2025-06-03 10:13:21,488 | INFO     | ready for new job
[2025-06-03 12:15:02] 2025-06-03 10:13:21,488 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:15:02] 2025-06-03 10:13:21,490 | INFO     | **************************************
[2025-06-03 12:15:02] 2025-06-03 10:13:21,490 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:15:02] 2025-06-03 10:13:21,491 | INFO     | **************************************
[2025-06-03 12:15:02] 2025-06-03 10:13:21,491 | INFO     | 
[2025-06-03 12:15:02] 2025-06-03 10:13:21,491 | INFO     | pilot is running in a VM
[2025-06-03 12:15:02] 2025-06-03 10:13:21,491 | INFO     | architecture information:
[2025-06-03 12:15:02] 2025-06-03 10:13:21,505 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:15:02] 2025-06-03 10:13:21,837 | INFO     | cat /etc/os-release:
[2025-06-03 12:15:02] NAME="CentOS Linux"
[2025-06-03 12:15:02] VERSION="7 (Core)"
[2025-06-03 12:15:02] ID="centos"
[2025-06-03 12:15:02] ID_LIKE="rhel fedora"
[2025-06-03 12:15:02] VERSION_ID="7"
[2025-06-03 12:15:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:15:02] ANSI_COLOR="0;31"
[2025-06-03 12:15:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:15:02] HOME_URL="https://www.centos.org/"
[2025-06-03 12:15:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:15:02] 
[2025-06-03 12:15:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:15:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:15:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:15:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:15:02] 
[2025-06-03 12:15:02] 2025-06-03 10:13:21,837 | INFO     | **************************************
[2025-06-03 12:15:02] 2025-06-03 10:13:22,341 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-06-03 12:15:02] 2025-06-03 10:13:22,478 | INFO     | sufficient remaining disk space (496594059264 B)
[2025-06-03 12:15:02] 2025-06-03 10:13:22,479 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:15:02] 2025-06-03 10:13:22,479 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:15:02] 2025-06-03 10:13:22,479 | INFO     | update_server=False
[2025-06-03 12:15:02] 2025-06-03 10:13:22,479 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:15:02] 2025-06-03 10:13:22,480 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:15:02] 2025-06-03 10:13:22,549 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:15:02] 2025-06-03 10:13:22,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:15:02] 2025-06-03 10:13:22,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:15:02] 2025-06-03 10:13:22,569 | INFO     | all job control threads have been joined
[2025-06-03 12:15:02] 2025-06-03 10:13:22,655 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:15:02] 2025-06-03 10:13:22,656 | INFO     | aborting loop
[2025-06-03 12:15:02] 2025-06-03 10:13:23,096 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:15:02] 2025-06-03 10:13:23,485 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:23,568 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:23,574 | INFO     | all data control threads have been joined
[2025-06-03 12:15:02] 2025-06-03 10:13:23,575 | INFO     | [job] control thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:23,638 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:23,661 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:23,699 | INFO     | all payload control threads have been joined
[2025-06-03 12:15:02] 2025-06-03 10:13:23,915 | INFO     | [job] validate thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:23,922 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:24,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:24,289 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:24,307 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:15:02] 2025-06-03 10:13:24,487 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:24,580 | INFO     | [data] control thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:24,661 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:24,705 | INFO     | [payload] control thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:24,760 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:25,313 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:27,155 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:15:02] 2025-06-03 10:13:27,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139845975512896)>', '<ExcThread(monitor, started 139845393438464)>']
[2025-06-03 12:15:02] 2025-06-03 10:13:27,580 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:15:02] 2025-06-03 10:13:27,581 | INFO     | [monitor] control thread has ended
[2025-06-03 12:15:02] 2025-06-03 10:13:32,519 | INFO     | all workflow threads have been joined
[2025-06-03 12:15:02] 2025-06-03 10:13:32,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:15:02] 2025-06-03 10:13:32,520 | INFO     | traces error code: 0
[2025-06-03 12:15:02] 2025-06-03 10:13:32,520 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:15:02] 2025-06-03 10:13:32,907 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:15:02] 2025-06-03 10:13:32,920 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:15:02] 2025-06-03 10:13:32,925 [wrapper] pilotpid: 31157
[2025-06-03 12:15:02] 2025-06-03 10:13:32,928 [wrapper] Pilot exit status: 0
[2025-06-03 12:15:02] 2025-06-03 10:13:33,175 [wrapper] pandaids: 6677387761
[2025-06-03 12:15:02] 2025-06-03 10:13:33,469 [wrapper] cleanup supervisor_pilot 27776 31158
[2025-06-03 12:15:02] 2025-06-03 10:13:33,510 [wrapper] Test setup, not cleaning
[2025-06-03 12:15:02] 2025-06-03 10:13:33,630 [wrapper] apfmon messages muted
[2025-06-03 12:15:02] 2025-06-03 10:13:33,746 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:15:02] 2025-06-03 10:13:33,825 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:15:02]  *** Error codes and diagnostics ***
[2025-06-03 12:15:02]     "exeErrorCode": 0,
[2025-06-03 12:15:02]     "exeErrorDiag": "",
[2025-06-03 12:15:02]     "pilotErrorCode": 0,
[2025-06-03 12:15:02]     "pilotErrorDiag": "",
[2025-06-03 12:15:02]  *** Listing of results directory ***
[2025-06-03 12:15:02] total 384660
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 12:15:02] -rwx------. 1 boinc boinc     37140 Jun  2 19:34 runpilot2-wrapper.sh
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:35 queuedata.json
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:15:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:09 run_atlas
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:09 job.xml
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc      6392 Jun  3 08:09 init_data.xml
[2025-06-03 12:15:02] -rw-r--r--. 2 boinc boinc 213582170 Jun  3 08:09 EVNT.45006593._000229.pool.root.1
[2025-06-03 12:15:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:09 start_atlas.sh
[2025-06-03 12:15:02] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:09 shared
[2025-06-03 12:15:02] -rw-r--r--. 2 boinc boinc    508876 Jun  3 08:09 input.tar.gz
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:09 boinc_lockfile
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc      2521 Jun  3 08:39 pandaJob.out
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc    986901 Jun  3 08:43 agis_schedconf.cvmfs.json
[2025-06-03 12:15:02] drwx------. 4 boinc boinc      4096 Jun  3 08:43 pilot3
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc 173572327 Jun  3 12:10 HITS.45006595._005722.pool.root.1
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:10 boinc_task_state.xml
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc      1018 Jun  3 12:11 memory_monitor_summary.json
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc   1603667 Jun  3 12:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc    379713 Jun  3 12:11 log.45006595._005722.job.log.tgz.1
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc        95 Jun  3 12:13 pilot_heartbeat.json
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc      7685 Jun  3 12:13 heartbeat.json
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc      4416 Jun  3 12:13 pilotlog.txt
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc   1079861 Jun  3 12:13 log.45006595._005722.job.log.1
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc       357 Jun  3 12:13 output.list
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:13 runtime_log
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc   1474560 Jun  3 12:13 result.tar.gz
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc      8659 Jun  3 12:13 runtime_log.err
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc       657 Jun  3 12:13 q52MDmoEOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm6yVKDmOU4TIn.diag
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:15 boinc_mmap_file
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:15 wrapper_checkpoint.txt
[2025-06-03 12:15:02] -rw-r--r--. 1 boinc boinc     20510 Jun  3 12:15 stderr.txt
[2025-06-03 12:15:02] HITS file was successfully produced:
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc 173572327 Jun  3 12:10 shared/HITS.pool.root.1
[2025-06-03 12:15:02]  *** Contents of shared directory: ***
[2025-06-03 12:15:02] total 380044
[2025-06-03 12:15:02] -rw-r--r--. 2 boinc boinc 213582170 Jun  3 08:09 ATLAS.root_0
[2025-06-03 12:15:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:09 start_atlas.sh
[2025-06-03 12:15:02] -rw-r--r--. 2 boinc boinc    508876 Jun  3 08:09 input.tar.gz
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc 173572327 Jun  3 12:10 HITS.pool.root.1
[2025-06-03 12:15:02] -rw-------. 1 boinc boinc   1474560 Jun  3 12:13 result.tar.gz
12:15:04 (9514): run_atlas exited; CPU time 43964.771919
12:15:04 (9514): called boinc_finish(0)

</stderr_txt>
]]>

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