Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:52:02 (16973): wrapper (7.7.26015): starting
21:52:02 (16973): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 21:52:02] Arguments: --nthreads 8
[2025-06-02 21:52:02] Threads: 8
[2025-06-02 21:52:02] Checking for CVMFS
[2025-06-02 21:52:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 21:52:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 21:52:03] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 21:52:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 21:52:05] 2.11.2.0 26121 30772 91076 146717 1 170 17985647 25165824 4585 130560 0 14892662 99.792 18051146 2027 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 21:52:05] CVMFS is ok
[2025-06-02 21:52:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 21:52:05] Checking for apptainer binary...
[2025-06-02 21:52:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 21:52:05] Running /usr/bin/apptainer --version
[2025-06-02 21:52:05] apptainer version 1.3.2-1.el7
[2025-06-02 21:52:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 22:37:30] cg-vwn308.simple-grid.lan
[2025-06-02 22:37:30] apptainer works
[2025-06-02 22:37:30] Set ATHENA_PROC_NUMBER=8
[2025-06-02 22:37:30] Set ATHENA_CORE_NUMBER=8
[2025-06-02 22:37:30] Starting ATLAS job with PandaID=6677387730
[2025-06-02 22:37:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:44:30]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:44:30] 2025-06-03 00:26:51,932 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:44:30] 2025-06-03 00:26:51,933 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:44:30] 2025-06-03 00:26:51,935 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:44:30] 2025-06-03 00:26:51,936 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:44:30] 2025-06-03 00:26:51,941 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:44:30] 2025-06-03 00:26:51,943 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,944 | INFO     | sum of deviations: 31790254249.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,944 | INFO     | mean x: 1748903793.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,945 | INFO     | mean y: 2532792.1502347416
[2025-06-03 03:44:30] 2025-06-03 00:26:51,945 | INFO     | -- intersect: -18552095532.502888
[2025-06-03 03:44:30] 2025-06-03 00:26:51,945 | INFO     | intersect: -18552095532.502888
[2025-06-03 03:44:30] 2025-06-03 00:26:51,945 | INFO     | chi2: 8.131450708354711
[2025-06-03 03:44:30] 2025-06-03 00:26:51,946 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,947 | INFO     | sum of deviations: 48182107850.5
[2025-06-03 03:44:30] 2025-06-03 00:26:51,948 | INFO     | mean x: 1748903640.5
[2025-06-03 03:44:30] 2025-06-03 00:26:51,948 | INFO     | mean y: 2544710.841346154
[2025-06-03 03:44:30] 2025-06-03 00:26:51,948 | INFO     | -- intersect: -30196505672.991936
[2025-06-03 03:44:30] 2025-06-03 00:26:51,948 | INFO     | intersect: -30196505672.991936
[2025-06-03 03:44:30] 2025-06-03 00:26:51,948 | INFO     | chi2: 7.34199350009373
[2025-06-03 03:44:30] 2025-06-03 00:26:51,948 | INFO     | current chi2=7.34199350009373 (change=9.708688358029985 %)
[2025-06-03 03:44:30] 2025-06-03 00:26:51,949 | INFO     | right removable region: 207
[2025-06-03 03:44:30] 2025-06-03 00:26:51,949 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,950 | INFO     | sum of deviations: -45518628494.5
[2025-06-03 03:44:30] 2025-06-03 00:26:51,951 | INFO     | mean x: 1748903945.5
[2025-06-03 03:44:30] 2025-06-03 00:26:51,951 | INFO     | mean y: 2589956.533653846
[2025-06-03 03:44:30] 2025-06-03 00:26:51,951 | INFO     | -- intersect: 28532259088.076904
[2025-06-03 03:44:30] 2025-06-03 00:26:51,951 | INFO     | intersect: 28532259088.076904
[2025-06-03 03:44:30] 2025-06-03 00:26:51,952 | INFO     | chi2: 3.0203514560803955
[2025-06-03 03:44:30] 2025-06-03 00:26:51,952 | INFO     | current chi2=3.0203514560803955 (change=62.8559335300758 %)
[2025-06-03 03:44:30] 2025-06-03 00:26:51,952 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,954 | INFO     | sum of deviations: -88766446528.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,954 | INFO     | mean x: 1748904098.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,954 | INFO     | mean y: 2623327.512315271
[2025-06-03 03:44:30] 2025-06-03 00:26:51,954 | INFO     | -- intersect: 59851889710.62368
[2025-06-03 03:44:30] 2025-06-03 00:26:51,954 | INFO     | intersect: 59851889710.62368
[2025-06-03 03:44:30] 2025-06-03 00:26:51,959 | INFO     | chi2: 1.1366040134003814
[2025-06-03 03:44:30] 2025-06-03 00:26:51,959 | INFO     | current chi2=1.1366040134003814 (change=62.368484928724556 %)
[2025-06-03 03:44:30] 2025-06-03 00:26:51,959 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 03:44:30] 2025-06-03 00:26:51,961 | INFO     | sum of deviations: -92933309557.99998
[2025-06-03 03:44:30] 2025-06-03 00:26:51,961 | INFO     | mean x: 1748904250.5
[2025-06-03 03:44:30] 2025-06-03 00:26:51,961 | INFO     | mean y: 2626665.202020202
[2025-06-03 03:44:30] 2025-06-03 00:26:51,961 | INFO     | -- intersect: 67529170182.3287
[2025-06-03 03:44:30] 2025-06-03 00:26:51,961 | INFO     | intersect: 67529170182.3287
[2025-06-03 03:44:30] 2025-06-03 00:26:51,962 | INFO     | chi2: 1.0452716431510722
[2025-06-03 03:44:30] 2025-06-03 00:26:51,962 | INFO     | current chi2=1.0452716431510722 (change=8.035548807897474 %)
[2025-06-03 03:44:30] 2025-06-03 00:26:51,962 | INFO     | left removable region: 30
[2025-06-03 03:44:30] 2025-06-03 00:26:51,962 | INFO     | sum of square deviations: 1719429448.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,964 | INFO     | sum of deviations: -64798410586.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,964 | INFO     | mean x: 1748904525.0
[2025-06-03 03:44:30] 2025-06-03 00:26:51,964 | INFO     | mean y: 2633683.406779661
[2025-06-03 03:44:30] 2025-06-03 00:26:51,964 | INFO     | -- intersect: 65911841891.095505
[2025-06-03 03:44:30] 2025-06-03 00:26:51,964 | INFO     | intersect: 65911841891.095505
[2025-06-03 03:44:30] 2025-06-03 00:26:51,964 | INFO     | chi2: 0.1359785244911807
[2025-06-03 03:44:30] 2025-06-03 00:26:51,965 | INFO     | -- intersect: 65911841891.095505
[2025-06-03 03:44:30] 2025-06-03 00:26:51,965 | INFO     | current memory leak: -37.69 B/s (using 177 data points, chi2=0.14)
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | ..............................
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | . Timing measurements:
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | . get job = 0 s
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | . initial setup = 9 s
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | . payload setup = 149 s
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | . stage-in = 0 s
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | . payload execution = 13141 s
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | . stage-out = 3 s
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | . log creation = 0 s
[2025-06-03 03:44:30] 2025-06-03 00:26:51,966 | INFO     | ..............................
[2025-06-03 03:44:30] 2025-06-03 00:26:52,105 | INFO     | 
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | job summary report
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | --------------------------------------------------
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | PanDA job id: 6677387730
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | task id: 45006595
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | errors: (none)
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | pilot state: finished 
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | transexitcode: 0
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | exeerrorcode: 0
[2025-06-03 03:44:30] 2025-06-03 00:26:52,106 | INFO     | exeerrordiag: 
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | exitcode: 0
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | exitmsg: OK
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | cpuconsumptiontime: 48075 s
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | nevents: 400
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | neventsw: 0
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | pid: 20219
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | pgrp: 20219
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | corecount: 8
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | event service: False
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 13: 2405233, 23: 2405289, 34: 2405317, 45: 2405473, 56: 2405501, 66: 2405529, 77: 2405557, 88: 2405613, 92: 2406127, 98
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | --------------------------------------------------
[2025-06-03 03:44:30] 2025-06-03 00:26:52,107 | INFO     | 
[2025-06-03 03:44:30] 2025-06-03 00:26:52,108 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 03:44:30] 2025-06-03 00:26:52,574 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,574 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,574 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,575 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,576 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,576 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,576 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,576 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:44:30] 2025-06-03 00:26:52,576 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,576 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:44:30] 2025-06-03 00:26:52,576 | INFO     | job 6677387730 has completed (purged errors)
[2025-06-03 03:44:30] 2025-06-03 00:26:52,576 | INFO     | overall cleanup function is called
[2025-06-03 03:44:30] 2025-06-03 00:26:53,396 | INFO     | PID=13630 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 03:44:30] 2025-06-03 00:26:53,397 | INFO     | .. there are 9 such processes running
[2025-06-03 03:44:30] 2025-06-03 00:26:53,585 | INFO     | --- collectZombieJob: --- 10, [20219]
[2025-06-03 03:44:30] 2025-06-03 00:26:53,586 | INFO     | zombie collector waiting for pid 20219
[2025-06-03 03:44:30] 2025-06-03 00:26:53,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:44:30] 2025-06-03 00:26:53,586 | INFO     | collected zombie processes
[2025-06-03 03:44:30] 2025-06-03 00:26:53,586 | INFO     | will attempt to kill all subprocesses of pid=20219
[2025-06-03 03:44:30] 2025-06-03 00:26:53,719 | INFO     | process IDs to be killed: [20219] (in reverse order)
[2025-06-03 03:44:30] 2025-06-03 00:26:54,360 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:44:30] 2025-06-03 00:26:54,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:44:30] 2025-06-03 00:26:54,364 | INFO     | did not find any defunct processes belonging to 20219
[2025-06-03 03:44:30] 2025-06-03 00:26:54,367 | INFO     | did not find any defunct processes belonging to 20219
[2025-06-03 03:44:30] 2025-06-03 00:26:54,369 | INFO     | ready for new job
[2025-06-03 03:44:30] 2025-06-03 00:26:54,369 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:44:30] 2025-06-03 00:26:54,371 | INFO     | **************************************
[2025-06-03 03:44:30] 2025-06-03 00:26:54,371 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:44:30] 2025-06-03 00:26:54,371 | INFO     | **************************************
[2025-06-03 03:44:30] 2025-06-03 00:26:54,371 | INFO     | 
[2025-06-03 03:44:30] 2025-06-03 00:26:54,372 | INFO     | pilot is running in a VM
[2025-06-03 03:44:30] 2025-06-03 00:26:54,372 | INFO     | architecture information:
[2025-06-03 03:44:30] 2025-06-03 00:26:54,373 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:44:30] 2025-06-03 00:26:54,444 | INFO     | cat /etc/os-release:
[2025-06-03 03:44:30] NAME="CentOS Linux"
[2025-06-03 03:44:30] VERSION="7 (Core)"
[2025-06-03 03:44:30] ID="centos"
[2025-06-03 03:44:30] ID_LIKE="rhel fedora"
[2025-06-03 03:44:30] VERSION_ID="7"
[2025-06-03 03:44:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:44:30] ANSI_COLOR="0;31"
[2025-06-03 03:44:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:44:30] HOME_URL="https://www.centos.org/"
[2025-06-03 03:44:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:44:30] 
[2025-06-03 03:44:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:44:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:44:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:44:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:44:30] 
[2025-06-03 03:44:30] 2025-06-03 00:26:54,444 | INFO     | **************************************
[2025-06-03 03:44:30] 2025-06-03 00:26:54,947 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 03:44:30] 2025-06-03 00:26:55,224 | INFO     | sufficient remaining disk space (496824745984 B)
[2025-06-03 03:44:30] 2025-06-03 00:26:55,225 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:44:30] 2025-06-03 00:26:55,225 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:44:30] 2025-06-03 00:26:55,225 | INFO     | update_server=False
[2025-06-03 03:44:30] 2025-06-03 00:26:55,225 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:44:30] 2025-06-03 00:26:55,404 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:44:30] 2025-06-03 00:26:55,404 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:44:30] 2025-06-03 00:26:55,404 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:44:30] 2025-06-03 00:26:55,759 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:44:30] 2025-06-03 00:26:55,760 | INFO     | aborting loop
[2025-06-03 03:44:30] 2025-06-03 00:26:55,946 | INFO     | all payload control threads have been joined
[2025-06-03 03:44:30] 2025-06-03 00:26:56,032 | INFO     | all data control threads have been joined
[2025-06-03 03:44:30] 2025-06-03 00:26:56,232 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:56,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:56,389 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:44:30] 2025-06-03 00:26:56,445 | INFO     | all job control threads have been joined
[2025-06-03 03:44:30] 2025-06-03 00:26:56,636 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:56,766 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:56,952 | INFO     | [payload] control thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:57,038 | INFO     | [data] control thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:57,103 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:57,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:44:30] 2025-06-03 00:26:57,153 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:57,284 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:57,356 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:57,378 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:57,430 | INFO     | [job] validate thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:57,451 | INFO     | [job] control thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:58,116 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:26:58,261 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:44:30] 2025-06-03 00:26:58,396 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:27:02,271 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:44:30] 2025-06-03 00:27:02,428 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140559403292480)>', '<ExcThread(monitor, started 140558827771648)>']
[2025-06-03 03:44:30] 2025-06-03 00:27:02,445 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:44:30] 2025-06-03 00:27:02,446 | INFO     | [monitor] control thread has ended
[2025-06-03 03:44:30] 2025-06-03 00:27:07,454 | INFO     | all workflow threads have been joined
[2025-06-03 03:44:30] 2025-06-03 00:27:07,455 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:44:30] 2025-06-03 00:27:07,455 | INFO     | traces error code: 0
[2025-06-03 03:44:30] 2025-06-03 00:27:07,455 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:44:30] 2025-06-03 00:27:07,743 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:44:30] 2025-06-03 00:27:07,786 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:44:30] 2025-06-03 00:27:07,821 [wrapper] pilotpid: 13630
[2025-06-03 03:44:30] 2025-06-03 00:27:07,858 [wrapper] Pilot exit status: 0
[2025-06-03 03:44:30] 2025-06-03 00:27:08,268 [wrapper] pandaids: 6677387730
[2025-06-03 03:44:30] 2025-06-03 00:27:08,998 [wrapper] cleanup supervisor_pilot 20218 13631
[2025-06-03 03:44:30] 2025-06-03 00:27:09,061 [wrapper] Test setup, not cleaning
[2025-06-03 03:44:30] 2025-06-03 00:27:09,086 [wrapper] apfmon messages muted
[2025-06-03 03:44:30] 2025-06-03 00:27:09,139 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:44:30] 2025-06-03 00:27:09,231 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:44:30]  *** Error codes and diagnostics ***
[2025-06-03 03:44:30]     "exeErrorCode": 0,
[2025-06-03 03:44:30]     "exeErrorDiag": "",
[2025-06-03 03:44:30]     "pilotErrorCode": 0,
[2025-06-03 03:44:30]     "pilotErrorDiag": "",
[2025-06-03 03:44:30]  *** Listing of results directory ***
[2025-06-03 03:44:30] total 388992
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 03:44:30] -rwx------. 1 boinc boinc     37140 Jun  2 19:34 runpilot2-wrapper.sh
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:34 queuedata.json
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc       100 Jun  2 21:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:44:30] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 21:52 run_atlas
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc       105 Jun  2 21:52 job.xml
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc      6391 Jun  2 21:52 init_data.xml
[2025-06-03 03:44:30] -rw-r--r--. 2 boinc boinc 213548318 Jun  2 21:52 EVNT.45006593._000228.pool.root.1
[2025-06-03 03:44:30] -rw-r--r--. 2 boinc boinc     15093 Jun  2 21:52 start_atlas.sh
[2025-06-03 03:44:30] drwxrwx--x. 2 boinc boinc        68 Jun  2 21:52 shared
[2025-06-03 03:44:30] -rw-r--r--. 2 boinc boinc    508876 Jun  2 21:52 input.tar.gz
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc         0 Jun  2 21:52 boinc_lockfile
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc      2521 Jun  2 22:37 pandaJob.out
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc    987975 Jun  2 22:40 agis_schedconf.cvmfs.json
[2025-06-03 03:44:30] drwx------. 4 boinc boinc      4096 Jun  2 22:40 pilot3
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc 177879368 Jun  3 02:24 HITS.45006595._005691.pool.root.1
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:24 boinc_task_state.xml
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc      1018 Jun  3 02:25 memory_monitor_summary.json
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc   1603667 Jun  3 02:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc    379983 Jun  3 02:25 log.45006595._005691.job.log.tgz.1
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc        95 Jun  3 02:26 pilot_heartbeat.json
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc      7695 Jun  3 02:26 heartbeat.json
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc      4416 Jun  3 02:27 pilotlog.txt
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc   1161212 Jun  3 02:27 log.45006595._005691.job.log.1
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc       357 Jun  3 02:27 output.list
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:27 runtime_log
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc   1556480 Jun  3 02:27 result.tar.gz
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc       656 Jun  3 02:27 wuMMDmoEOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmcyVKDmZS3YDo.diag
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc      8659 Jun  3 02:27 runtime_log.err
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:44 boinc_mmap_file
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc        28 Jun  3 03:44 wrapper_checkpoint.txt
[2025-06-03 03:44:30] -rw-r--r--. 1 boinc boinc     20572 Jun  3 03:44 stderr.txt
[2025-06-03 03:44:30] HITS file was successfully produced:
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc 177879368 Jun  3 02:24 shared/HITS.pool.root.1
[2025-06-03 03:44:30]  *** Contents of shared directory: ***
[2025-06-03 03:44:30] total 384292
[2025-06-03 03:44:30] -rw-r--r--. 2 boinc boinc 213548318 Jun  2 21:52 ATLAS.root_0
[2025-06-03 03:44:30] -rw-r--r--. 2 boinc boinc     15093 Jun  2 21:52 start_atlas.sh
[2025-06-03 03:44:30] -rw-r--r--. 2 boinc boinc    508876 Jun  2 21:52 input.tar.gz
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc 177879368 Jun  3 02:24 HITS.pool.root.1
[2025-06-03 03:44:30] -rw-------. 1 boinc boinc   1556480 Jun  3 02:27 result.tar.gz
03:44:32 (16973): run_atlas exited; CPU time 48257.201964
03:44:32 (16973): called boinc_finish(0)

</stderr_txt>
]]>

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