Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:23:45 (5526): wrapper (7.7.26015): starting
08:23:45 (5526): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:23:45] Arguments: --nthreads 8
[2025-06-03 08:23:45] Threads: 8
[2025-06-03 08:23:45] Checking for CVMFS
[2025-06-03 08:23:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:23:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:23:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:23:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:23:46] 2.11.2.0 32728 31392 91692 146729 0 114 21289571 25165825 4105 130560 0 15884231 99.802 17931973 2168 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:23:46] CVMFS is ok
[2025-06-03 08:23:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:23:46] Checking for apptainer binary...
[2025-06-03 08:23:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:23:46] Running /usr/bin/apptainer --version
[2025-06-03 08:23:46] apptainer version 1.3.2-1.el7
[2025-06-03 08:23:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:23:47] cg-vwn337.simple-grid.lan
[2025-06-03 08:23:47] apptainer works
[2025-06-03 08:23:47] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:23:47] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:23:47] Starting ATLAS job with PandaID=6677392518
[2025-06-03 08:23:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:51:14]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:51:14] 2025-06-03 10:04:24,726 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:51:14] 2025-06-03 10:04:24,726 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:51:14] 2025-06-03 10:04:24,726 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:51:14] 2025-06-03 10:04:24,726 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:51:14] 2025-06-03 10:04:24,731 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:51:14] 2025-06-03 10:04:24,731 | INFO     | sum of square deviations: 3038856977.5
[2025-06-03 12:51:14] 2025-06-03 10:04:24,733 | INFO     | sum of deviations: -41711559782.00001
[2025-06-03 12:51:14] 2025-06-03 10:04:24,733 | INFO     | mean x: 1748938412.5
[2025-06-03 12:51:14] 2025-06-03 10:04:24,733 | INFO     | mean y: 2530968.785046729
[2025-06-03 12:51:14] 2025-06-03 10:04:24,734 | INFO     | -- intersect: 24008579851.034534
[2025-06-03 12:51:14] 2025-06-03 10:04:24,734 | INFO     | intersect: 24008579851.034534
[2025-06-03 12:51:14] 2025-06-03 10:04:24,734 | INFO     | chi2: 2.9187041233726334
[2025-06-03 12:51:14] 2025-06-03 10:04:24,735 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,736 | INFO     | sum of deviations: -25534867546.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,737 | INFO     | mean x: 1748938260.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,737 | INFO     | mean y: 2542623.2918660287
[2025-06-03 12:51:14] 2025-06-03 10:04:24,737 | INFO     | -- intersect: 15778682498.929785
[2025-06-03 12:51:14] 2025-06-03 10:04:24,737 | INFO     | intersect: 15778682498.929785
[2025-06-03 12:51:14] 2025-06-03 10:04:24,737 | INFO     | chi2: 2.103652556168851
[2025-06-03 12:51:14] 2025-06-03 10:04:24,737 | INFO     | current chi2=2.103652556168851 (change=27.92511788628889 %)
[2025-06-03 12:51:14] 2025-06-03 10:04:24,738 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,739 | INFO     | sum of deviations: -24130078964.99998
[2025-06-03 12:51:14] 2025-06-03 10:04:24,739 | INFO     | mean x: 1748938107.5
[2025-06-03 12:51:14] 2025-06-03 10:04:24,740 | INFO     | mean y: 2543703.5784313725
[2025-06-03 12:51:14] 2025-06-03 10:04:24,740 | INFO     | -- intersect: 16034063418.040695
[2025-06-03 12:51:14] 2025-06-03 10:04:24,740 | INFO     | intersect: 16034063418.040695
[2025-06-03 12:51:14] 2025-06-03 10:04:24,740 | INFO     | chi2: 2.1026290701021697
[2025-06-03 12:51:14] 2025-06-03 10:04:24,740 | INFO     | current chi2=2.1026290701021697 (change=0.04865280930920858 %)
[2025-06-03 12:51:14] 2025-06-03 10:04:24,740 | INFO     | right removable region: 203
[2025-06-03 12:51:14] 2025-06-03 10:04:24,741 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,742 | INFO     | sum of deviations: -82800269364.99998
[2025-06-03 12:51:14] 2025-06-03 10:04:24,742 | INFO     | mean x: 1748938565.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,743 | INFO     | mean y: 2560845.5311004785
[2025-06-03 12:51:14] 2025-06-03 10:04:24,743 | INFO     | -- intersect: 51158841828.4545
[2025-06-03 12:51:14] 2025-06-03 10:04:24,743 | INFO     | intersect: 51158841828.4545
[2025-06-03 12:51:14] 2025-06-03 10:04:24,743 | INFO     | chi2: 1.0676045346618899
[2025-06-03 12:51:14] 2025-06-03 10:04:24,743 | INFO     | current chi2=1.0676045346618899 (change=63.42196777971976 %)
[2025-06-03 12:51:14] 2025-06-03 10:04:24,744 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,745 | INFO     | sum of deviations: -82015855755.5
[2025-06-03 12:51:14] 2025-06-03 10:04:24,745 | INFO     | mean x: 1748938717.5
[2025-06-03 12:51:14] 2025-06-03 10:04:24,745 | INFO     | mean y: 2560200.8774509802
[2025-06-03 12:51:14] 2025-06-03 10:04:24,746 | INFO     | -- intersect: 54492198172.78149
[2025-06-03 12:51:14] 2025-06-03 10:04:24,746 | INFO     | intersect: 54492198172.78149
[2025-06-03 12:51:14] 2025-06-03 10:04:24,746 | INFO     | chi2: 1.042088782562753
[2025-06-03 12:51:14] 2025-06-03 10:04:24,746 | INFO     | current chi2=1.042088782562753 (change=2.3900003485108607 %)
[2025-06-03 12:51:14] 2025-06-03 10:04:24,746 | INFO     | left removable region: 20
[2025-06-03 12:51:14] 2025-06-03 10:04:24,747 | INFO     | sum of square deviations: 1900284932.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,748 | INFO     | sum of deviations: -52986276035.999954
[2025-06-03 12:51:14] 2025-06-03 10:04:24,748 | INFO     | mean x: 1748938687.0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,748 | INFO     | mean y: 2566227.0765027325
[2025-06-03 12:51:14] 2025-06-03 10:04:24,748 | INFO     | -- intersect: 48768804636.32855
[2025-06-03 12:51:14] 2025-06-03 10:04:24,748 | INFO     | intersect: 48768804636.32855
[2025-06-03 12:51:14] 2025-06-03 10:04:24,749 | INFO     | chi2: 0.18429764266892873
[2025-06-03 12:51:14] 2025-06-03 10:04:24,749 | INFO     | -- intersect: 48768804636.32855
[2025-06-03 12:51:14] 2025-06-03 10:04:24,749 | INFO     | current memory leak: -27.88 B/s (using 183 data points, chi2=0.18)
[2025-06-03 12:51:14] 2025-06-03 10:04:24,750 | INFO     | ..............................
[2025-06-03 12:51:14] 2025-06-03 10:04:24,750 | INFO     | . Timing measurements:
[2025-06-03 12:51:14] 2025-06-03 10:04:24,750 | INFO     | . get job = 0 s
[2025-06-03 12:51:14] 2025-06-03 10:04:24,750 | INFO     | . initial setup = 3 s
[2025-06-03 12:51:14] 2025-06-03 10:04:24,750 | INFO     | . payload setup = 17 s
[2025-06-03 12:51:14] 2025-06-03 10:04:24,750 | INFO     | . stage-in = 0 s
[2025-06-03 12:51:14] 2025-06-03 10:04:24,750 | INFO     | . payload execution = 13076 s
[2025-06-03 12:51:14] 2025-06-03 10:04:24,751 | INFO     | . stage-out = 3 s
[2025-06-03 12:51:14] 2025-06-03 10:04:24,751 | INFO     | . log creation = 0 s
[2025-06-03 12:51:14] 2025-06-03 10:04:24,751 | INFO     | ..............................
[2025-06-03 12:51:14] 2025-06-03 10:04:24,877 | INFO     | 
[2025-06-03 12:51:14] 2025-06-03 10:04:24,878 | INFO     | job summary report
[2025-06-03 12:51:14] 2025-06-03 10:04:24,878 | INFO     | --------------------------------------------------
[2025-06-03 12:51:14] 2025-06-03 10:04:24,878 | INFO     | PanDA job id: 6677392518
[2025-06-03 12:51:14] 2025-06-03 10:04:24,878 | INFO     | task id: 45006595
[2025-06-03 12:51:14] 2025-06-03 10:04:24,878 | INFO     | errors: (none)
[2025-06-03 12:51:14] 2025-06-03 10:04:24,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:51:14] 2025-06-03 10:04:24,878 | INFO     | pilot state: finished 
[2025-06-03 12:51:14] 2025-06-03 10:04:24,878 | INFO     | transexitcode: 0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | exeerrorcode: 0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | exeerrordiag: 
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | exitcode: 0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | exitmsg: OK
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | cpuconsumptiontime: 50100 s
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | nevents: 400
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | neventsw: 0
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | pid: 19252
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | pgrp: 19252
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | corecount: 8
[2025-06-03 12:51:14] 2025-06-03 10:04:24,879 | INFO     | event service: False
[2025-06-03 12:51:14] 2025-06-03 10:04:24,880 | INFO     | sizes: {0: 2405177, 1: 2405177, 9: 2405411, 12: 2405439, 13098: 2434739, 13103: 2443864, 13194: 2443978}
[2025-06-03 12:51:14] 2025-06-03 10:04:24,880 | INFO     | --------------------------------------------------
[2025-06-03 12:51:14] 2025-06-03 10:04:24,880 | INFO     | 
[2025-06-03 12:51:14] 2025-06-03 10:04:24,880 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 12:51:14] 2025-06-03 10:04:25,081 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,082 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | job 6677392518 has completed (purged errors)
[2025-06-03 12:51:14] 2025-06-03 10:04:25,083 | INFO     | overall cleanup function is called
[2025-06-03 12:51:14] 2025-06-03 10:04:25,716 | INFO     | PID=9320 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 12:51:14] 2025-06-03 10:04:25,716 | INFO     | .. there are 9 such processes running
[2025-06-03 12:51:14] 2025-06-03 10:04:26,092 | INFO     | --- collectZombieJob: --- 10, [19252]
[2025-06-03 12:51:14] 2025-06-03 10:04:26,093 | INFO     | zombie collector waiting for pid 19252
[2025-06-03 12:51:14] 2025-06-03 10:04:26,093 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:51:14] 2025-06-03 10:04:26,093 | INFO     | collected zombie processes
[2025-06-03 12:51:14] 2025-06-03 10:04:26,093 | INFO     | will attempt to kill all subprocesses of pid=19252
[2025-06-03 12:51:14] 2025-06-03 10:04:26,226 | INFO     | process IDs to be killed: [19252] (in reverse order)
[2025-06-03 12:51:14] 2025-06-03 10:04:26,826 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:51:14] 2025-06-03 10:04:26,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:51:14] 2025-06-03 10:04:26,830 | INFO     | did not find any defunct processes belonging to 19252
[2025-06-03 12:51:14] 2025-06-03 10:04:26,834 | INFO     | did not find any defunct processes belonging to 19252
[2025-06-03 12:51:14] 2025-06-03 10:04:26,834 | INFO     | ready for new job
[2025-06-03 12:51:14] 2025-06-03 10:04:26,834 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:51:14] 2025-06-03 10:04:26,836 | INFO     | **************************************
[2025-06-03 12:51:14] 2025-06-03 10:04:26,836 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:51:14] 2025-06-03 10:04:26,836 | INFO     | **************************************
[2025-06-03 12:51:14] 2025-06-03 10:04:26,836 | INFO     | 
[2025-06-03 12:51:14] 2025-06-03 10:04:26,837 | INFO     | pilot is running in a VM
[2025-06-03 12:51:14] 2025-06-03 10:04:26,837 | INFO     | architecture information:
[2025-06-03 12:51:14] 2025-06-03 10:04:26,851 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:51:14] 2025-06-03 10:04:27,028 | INFO     | cat /etc/os-release:
[2025-06-03 12:51:14] NAME="CentOS Linux"
[2025-06-03 12:51:14] VERSION="7 (Core)"
[2025-06-03 12:51:14] ID="centos"
[2025-06-03 12:51:14] ID_LIKE="rhel fedora"
[2025-06-03 12:51:14] VERSION_ID="7"
[2025-06-03 12:51:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:51:14] ANSI_COLOR="0;31"
[2025-06-03 12:51:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:51:14] HOME_URL="https://www.centos.org/"
[2025-06-03 12:51:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:51:14] 
[2025-06-03 12:51:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:51:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:51:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:51:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:51:14] 
[2025-06-03 12:51:14] 2025-06-03 10:04:27,028 | INFO     | **************************************
[2025-06-03 12:51:14] 2025-06-03 10:04:27,532 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 12:51:14] 2025-06-03 10:04:27,642 | INFO     | sufficient remaining disk space (496555261952 B)
[2025-06-03 12:51:14] 2025-06-03 10:04:27,643 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:51:14] 2025-06-03 10:04:27,643 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:51:14] 2025-06-03 10:04:27,643 | INFO     | update_server=False
[2025-06-03 12:51:14] 2025-06-03 10:04:27,643 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:51:14] 2025-06-03 10:04:27,643 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:51:14] 2025-06-03 10:04:27,644 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:51:14] 2025-06-03 10:04:27,645 | INFO     | aborting loop
[2025-06-03 12:51:14] 2025-06-03 10:04:27,723 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:51:14] 2025-06-03 10:04:27,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:51:14] 2025-06-03 10:04:27,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:51:14] 2025-06-03 10:04:27,946 | INFO     | all data control threads have been joined
[2025-06-03 12:51:14] 2025-06-03 10:04:28,083 | INFO     | all job control threads have been joined
[2025-06-03 12:51:14] 2025-06-03 10:04:28,649 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:28,651 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:28,717 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:28,832 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:28,857 | INFO     | all payload control threads have been joined
[2025-06-03 12:51:14] 2025-06-03 10:04:28,953 | INFO     | [data] control thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,090 | INFO     | [job] control thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,107 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,137 | INFO     | [job] validate thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,233 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,377 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,515 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,651 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,787 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,864 | INFO     | [payload] control thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:29,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:51:14] 2025-06-03 10:04:29,913 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:51:14] 2025-06-03 10:04:30,900 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:33,923 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:51:14] 2025-06-03 10:04:34,330 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140702855993152)>', '<ExcThread(monitor, started 140702415562496)>']
[2025-06-03 12:51:14] 2025-06-03 10:04:34,764 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:51:14] 2025-06-03 10:04:34,765 | INFO     | [monitor] control thread has ended
[2025-06-03 12:51:14] 2025-06-03 10:04:39,355 | INFO     | all workflow threads have been joined
[2025-06-03 12:51:14] 2025-06-03 10:04:39,356 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:51:14] 2025-06-03 10:04:39,356 | INFO     | traces error code: 0
[2025-06-03 12:51:14] 2025-06-03 10:04:39,356 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:51:14] 2025-06-03 10:04:39,767 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:51:14] 2025-06-03 10:04:39,853 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:51:14] 2025-06-03 10:04:39,903 [wrapper] pilotpid: 9320
[2025-06-03 12:51:14] 2025-06-03 10:04:40,027 [wrapper] Pilot exit status: 0
[2025-06-03 12:51:14] 2025-06-03 10:04:40,378 [wrapper] pandaids: 6677392518
[2025-06-03 12:51:14] 2025-06-03 10:04:41,223 [wrapper] cleanup supervisor_pilot  5210 9321
[2025-06-03 12:51:14] 2025-06-03 10:04:41,325 [wrapper] Test setup, not cleaning
[2025-06-03 12:51:14] 2025-06-03 10:04:41,431 [wrapper] apfmon messages muted
[2025-06-03 12:51:14] 2025-06-03 10:04:41,524 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:51:14] 2025-06-03 10:04:41,596 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:51:14]  *** Error codes and diagnostics ***
[2025-06-03 12:51:14]     "exeErrorCode": 0,
[2025-06-03 12:51:14]     "exeErrorDiag": "",
[2025-06-03 12:51:14]     "pilotErrorCode": 0,
[2025-06-03 12:51:14]     "pilotErrorDiag": "",
[2025-06-03 12:51:14]  *** Listing of results directory ***
[2025-06-03 12:51:14] total 392240
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:45 queuedata.json
[2025-06-03 12:51:14] -rwx------. 1 boinc boinc     37140 Jun  2 20:47 runpilot2-wrapper.sh
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:47 pilot3.tar.gz
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:51:14] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:23 run_atlas
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:23 job.xml
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc      6391 Jun  3 08:23 init_data.xml
[2025-06-03 12:51:14] -rw-r--r--. 2 boinc boinc 213454319 Jun  3 08:23 EVNT.45006593._000319.pool.root.1
[2025-06-03 12:51:14] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:23 start_atlas.sh
[2025-06-03 12:51:14] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:23 shared
[2025-06-03 12:51:14] -rw-r--r--. 2 boinc boinc    508872 Jun  3 08:23 input.tar.gz
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:23 boinc_lockfile
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc      2521 Jun  3 08:23 pandaJob.out
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc    988073 Jun  3 08:24 agis_schedconf.cvmfs.json
[2025-06-03 12:51:14] drwx------. 4 boinc boinc      4096 Jun  3 08:24 pilot3
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc 181324843 Jun  3 12:01 HITS.45006595._007966.pool.root.1
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc       530 Jun  3 12:01 boinc_task_state.xml
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc      1018 Jun  3 12:02 memory_monitor_summary.json
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc   1603667 Jun  3 12:02 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc    378451 Jun  3 12:02 log.45006595._007966.job.log.tgz.1
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc        95 Jun  3 12:03 pilot_heartbeat.json
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc      7702 Jun  3 12:04 heartbeat.json
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc      4416 Jun  3 12:04 pilotlog.txt
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc   1143314 Jun  3 12:04 log.45006595._007966.job.log.1
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc       357 Jun  3 12:04 output.list
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:04 runtime_log
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc   1546240 Jun  3 12:04 result.tar.gz
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc      8659 Jun  3 12:04 runtime_log.err
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc       656 Jun  3 12:04 5hyNDmrMPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmS4fKDmIvxGyn.diag
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:51 boinc_mmap_file
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:51 wrapper_checkpoint.txt
[2025-06-03 12:51:14] -rw-r--r--. 1 boinc boinc     20525 Jun  3 12:51 stderr.txt
[2025-06-03 12:51:14] HITS file was successfully produced:
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc 181324843 Jun  3 12:01 shared/HITS.pool.root.1
[2025-06-03 12:51:14]  *** Contents of shared directory: ***
[2025-06-03 12:51:14] total 387556
[2025-06-03 12:51:14] -rw-r--r--. 2 boinc boinc 213454319 Jun  3 08:23 ATLAS.root_0
[2025-06-03 12:51:14] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:23 start_atlas.sh
[2025-06-03 12:51:14] -rw-r--r--. 2 boinc boinc    508872 Jun  3 08:23 input.tar.gz
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc 181324843 Jun  3 12:01 HITS.pool.root.1
[2025-06-03 12:51:14] -rw-------. 1 boinc boinc   1546240 Jun  3 12:04 result.tar.gz
12:51:16 (5526): run_atlas exited; CPU time 50277.721776
12:51:16 (5526): called boinc_finish(0)

</stderr_txt>
]]>

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