Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:50:10 (32335): wrapper (7.7.26015): starting
01:50:10 (32335): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:50:10] Arguments: --nthreads 8
[2025-06-03 01:50:10] Threads: 8
[2025-06-03 01:50:10] Checking for CVMFS
[2025-06-03 01:50:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:50:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:50:11] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:50:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:50:12] 2.11.2.0 18967 31105 96596 146722 2 95 19557303 25165825 4266 130560 0 15488997 99.819 17221327 2431 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 01:50:12] CVMFS is ok
[2025-06-03 01:50:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:50:12] Checking for apptainer binary...
[2025-06-03 01:50:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:50:12] Running /usr/bin/apptainer --version
[2025-06-03 01:50:12] apptainer version 1.3.2-1.el7
[2025-06-03 01:50:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:50:14] cg-vwn474.simple-grid.lan
[2025-06-03 01:50:14] apptainer works
[2025-06-03 01:50:14] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:50:14] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:50:14] Starting ATLAS job with PandaID=6665729639
[2025-06-03 01:50:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:36:39]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:36:39] 2025-06-03 04:26:33,766 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6665729639/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:36:39] 2025-06-03 04:26:33,767 | INFO     | extracted standard info from prmon json
[2025-06-03 06:36:39] 2025-06-03 04:26:33,767 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:36:39] 2025-06-03 04:26:33,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:36:39] 2025-06-03 04:26:33,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:36:39] 2025-06-03 04:26:33,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:36:39] 2025-06-03 04:26:33,773 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:36:39] 2025-06-03 04:26:33,773 | INFO     | sum of square deviations: 6035722470.0
[2025-06-03 06:36:39] 2025-06-03 04:26:33,776 | INFO     | sum of deviations: 32737880769.999992
[2025-06-03 06:36:39] 2025-06-03 04:26:33,786 | INFO     | mean x: 1748916466.0
[2025-06-03 06:36:39] 2025-06-03 04:26:33,787 | INFO     | mean y: 2476961.1226765797
[2025-06-03 06:36:39] 2025-06-03 04:26:33,787 | INFO     | -- intersect: -9483681328.159592
[2025-06-03 06:36:39] 2025-06-03 04:26:33,787 | INFO     | intersect: -9483681328.159592
[2025-06-03 06:36:39] 2025-06-03 04:26:33,787 | INFO     | chi2: 2.222788305548211
[2025-06-03 06:36:39] 2025-06-03 04:26:33,788 | INFO     | sum of square deviations: 5705372090.0
[2025-06-03 06:36:39] 2025-06-03 04:26:33,790 | INFO     | sum of deviations: 49771186459.49999
[2025-06-03 06:36:39] 2025-06-03 04:26:33,790 | INFO     | mean x: 1748916313.5
[2025-06-03 06:36:39] 2025-06-03 04:26:33,790 | INFO     | mean y: 2484700.132575758
[2025-06-03 06:36:39] 2025-06-03 04:26:33,790 | INFO     | -- intersect: -15254301109.479683
[2025-06-03 06:36:39] 2025-06-03 04:26:33,790 | INFO     | intersect: -15254301109.479683
[2025-06-03 06:36:39] 2025-06-03 04:26:33,791 | INFO     | chi2: 1.448050859201086
[2025-06-03 06:36:39] 2025-06-03 04:26:33,791 | INFO     | current chi2=1.448050859201086 (change=34.8543063868626 %)
[2025-06-03 06:36:39] 2025-06-03 04:26:33,791 | INFO     | sum of square deviations: 5387301010.0
[2025-06-03 06:36:39] 2025-06-03 04:26:33,794 | INFO     | sum of deviations: 48676672762.00001
[2025-06-03 06:36:39] 2025-06-03 04:26:33,794 | INFO     | mean x: 1748916161.0
[2025-06-03 06:36:39] 2025-06-03 04:26:33,794 | INFO     | mean y: 2484175.332046332
[2025-06-03 06:36:39] 2025-06-03 04:26:33,794 | INFO     | -- intersect: -15799755109.07919
[2025-06-03 06:36:39] 2025-06-03 04:26:33,794 | INFO     | intersect: -15799755109.07919
[2025-06-03 06:36:39] 2025-06-03 04:26:33,795 | INFO     | chi2: 1.448345734464507
[2025-06-03 06:36:39] 2025-06-03 04:26:33,795 | INFO     | current chi2=1.448345734464507 (change=-0.020363598526075125 %)
[2025-06-03 06:36:39] 2025-06-03 04:26:33,795 | INFO     | right removable region: 258
[2025-06-03 06:36:39] 2025-06-03 04:26:33,795 | INFO     | sum of square deviations: 5705372090.0
[2025-06-03 06:36:39] 2025-06-03 04:26:33,798 | INFO     | sum of deviations: -7683908432.000002
[2025-06-03 06:36:39] 2025-06-03 04:26:33,798 | INFO     | mean x: 1748916618.5
[2025-06-03 06:36:39] 2025-06-03 04:26:33,798 | INFO     | mean y: 2495458.984848485
[2025-06-03 06:36:39] 2025-06-03 04:26:33,798 | INFO     | -- intersect: 2357909784.250544
[2025-06-03 06:36:39] 2025-06-03 04:26:33,798 | INFO     | intersect: 2357909784.250544
[2025-06-03 06:36:39] 2025-06-03 04:26:33,799 | INFO     | chi2: 0.8053764529803981
[2025-06-03 06:36:39] 2025-06-03 04:26:33,799 | INFO     | current chi2=0.8053764529803981 (change=63.76728944586713 %)
[2025-06-03 06:36:39] 2025-06-03 04:26:33,799 | INFO     | sum of square deviations: 5387301010.0
[2025-06-03 06:36:39] 2025-06-03 04:26:33,802 | INFO     | sum of deviations: -6932027434.000002
[2025-06-03 06:36:39] 2025-06-03 04:26:33,802 | INFO     | mean x: 1748916771.0
[2025-06-03 06:36:39] 2025-06-03 04:26:33,802 | INFO     | mean y: 2495090.4285714286
[2025-06-03 06:36:39] 2025-06-03 04:26:33,802 | INFO     | -- intersect: 2252887079.6362987
[2025-06-03 06:36:39] 2025-06-03 04:26:33,802 | INFO     | intersect: 2252887079.6362987
[2025-06-03 06:36:39] 2025-06-03 04:26:33,802 | INFO     | chi2: 0.7931291281185139
[2025-06-03 06:36:39] 2025-06-03 04:26:33,803 | INFO     | current chi2=0.7931291281185139 (change=1.520695671764601 %)
[2025-06-03 06:36:39] 2025-06-03 04:26:33,803 | INFO     | left removable region: 20
[2025-06-03 06:36:39] 2025-06-03 04:26:33,803 | INFO     | sum of square deviations: 4180243959.5
[2025-06-03 06:36:39] 2025-06-03 04:26:33,805 | INFO     | sum of deviations: 6233876486.5
[2025-06-03 06:36:39] 2025-06-03 04:26:33,805 | INFO     | mean x: 1748916740.5
[2025-06-03 06:36:39] 2025-06-03 04:26:33,805 | INFO     | mean y: 2505259.6596638653
[2025-06-03 06:36:39] 2025-06-03 04:26:33,805 | INFO     | -- intersect: -2605603513.674519
[2025-06-03 06:36:39] 2025-06-03 04:26:33,805 | INFO     | intersect: -2605603513.674519
[2025-06-03 06:36:39] 2025-06-03 04:26:33,805 | INFO     | chi2: 0.0007458711619942302
[2025-06-03 06:36:39] 2025-06-03 04:26:33,806 | INFO     | -- intersect: -2605603513.674519
[2025-06-03 06:36:39] 2025-06-03 04:26:33,806 | INFO     | current memory leak: 1.49 B/s (using 238 data points, chi2=0.00)
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | ..............................
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | . Timing measurements:
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | . get job = 0 s
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | . initial setup = 2 s
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | . payload setup = 13 s
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | . stage-in = 0 s
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | . payload execution = 16419 s
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | . stage-out = 3 s
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | . log creation = 1 s
[2025-06-03 06:36:39] 2025-06-03 04:26:33,807 | INFO     | ..............................
[2025-06-03 06:36:39] 2025-06-03 04:26:34,190 | INFO     | 
[2025-06-03 06:36:39] 2025-06-03 04:26:34,190 | INFO     | job summary report
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | --------------------------------------------------
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | PanDA job id: 6665729639
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | task id: 44871837
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | errors: (none)
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | pilot state: finished 
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | transexitcode: 0
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | exeerrorcode: 0
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | exeerrordiag: 
[2025-06-03 06:36:39] 2025-06-03 04:26:34,191 | INFO     | exitcode: 0
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | exitmsg: OK
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | cpuconsumptiontime: 62460 s
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | nevents: 400
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | neventsw: 0
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | pid: 14939
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | pgrp: 14939
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | corecount: 8
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | event service: False
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | sizes: {0: 2405063, 1: 2405262, 9: 2405468, 11: 2405496, 16436: 2436352, 16437: 2436351, 16441: 2445476, 16442: 2445532, 16534: 2445702}
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | --------------------------------------------------
[2025-06-03 06:36:39] 2025-06-03 04:26:34,192 | INFO     | 
[2025-06-03 06:36:39] 2025-06-03 04:26:34,193 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 06:36:39] 2025-06-03 04:26:34,633 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,633 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,633 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,634 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,635 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,635 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,635 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,635 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,635 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:36:39] 2025-06-03 04:26:34,635 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,635 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:36:39] 2025-06-03 04:26:34,635 | INFO     | job 6665729639 has completed (purged errors)
[2025-06-03 06:36:39] 2025-06-03 04:26:34,636 | INFO     | overall cleanup function is called
[2025-06-03 06:36:39] 2025-06-03 04:26:35,644 | INFO     | --- collectZombieJob: --- 10, [14939]
[2025-06-03 06:36:39] 2025-06-03 04:26:35,644 | INFO     | zombie collector waiting for pid 14939
[2025-06-03 06:36:39] 2025-06-03 04:26:35,645 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:36:39] 2025-06-03 04:26:35,645 | INFO     | collected zombie processes
[2025-06-03 06:36:39] 2025-06-03 04:26:35,645 | INFO     | will attempt to kill all subprocesses of pid=14939
[2025-06-03 06:36:39] 2025-06-03 04:26:35,780 | INFO     | process IDs to be killed: [14939] (in reverse order)
[2025-06-03 06:36:39] 2025-06-03 04:26:36,287 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:36:39] 2025-06-03 04:26:36,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:36:39] 2025-06-03 04:26:36,291 | INFO     | did not find any defunct processes belonging to 14939
[2025-06-03 06:36:39] 2025-06-03 04:26:36,294 | INFO     | did not find any defunct processes belonging to 14939
[2025-06-03 06:36:39] 2025-06-03 04:26:36,294 | INFO     | ready for new job
[2025-06-03 06:36:39] 2025-06-03 04:26:36,295 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:36:39] 2025-06-03 04:26:36,297 | INFO     | **************************************
[2025-06-03 06:36:39] 2025-06-03 04:26:36,297 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:36:39] 2025-06-03 04:26:36,297 | INFO     | **************************************
[2025-06-03 06:36:39] 2025-06-03 04:26:36,297 | INFO     | 
[2025-06-03 06:36:39] 2025-06-03 04:26:36,298 | INFO     | pilot is running in a VM
[2025-06-03 06:36:39] 2025-06-03 04:26:36,298 | INFO     | architecture information:
[2025-06-03 06:36:39] 2025-06-03 04:26:36,313 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:36:39] 2025-06-03 04:26:36,609 | INFO     | cat /etc/os-release:
[2025-06-03 06:36:39] NAME="CentOS Linux"
[2025-06-03 06:36:39] VERSION="7 (Core)"
[2025-06-03 06:36:39] ID="centos"
[2025-06-03 06:36:39] ID_LIKE="rhel fedora"
[2025-06-03 06:36:39] VERSION_ID="7"
[2025-06-03 06:36:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:36:39] ANSI_COLOR="0;31"
[2025-06-03 06:36:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:36:39] HOME_URL="https://www.centos.org/"
[2025-06-03 06:36:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:36:39] 
[2025-06-03 06:36:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:36:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:36:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:36:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:36:39] 
[2025-06-03 06:36:39] 2025-06-03 04:26:36,609 | INFO     | **************************************
[2025-06-03 06:36:39] 2025-06-03 04:26:37,112 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 06:36:39] 2025-06-03 04:26:37,323 | INFO     | sufficient remaining disk space (496992518144 B)
[2025-06-03 06:36:39] 2025-06-03 04:26:37,324 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:36:39] 2025-06-03 04:26:37,324 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:36:39] 2025-06-03 04:26:37,324 | INFO     | update_server=False
[2025-06-03 06:36:39] 2025-06-03 04:26:37,324 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:36:39] 2025-06-03 04:26:37,331 | INFO     | all job control threads have been joined
[2025-06-03 06:36:39] 2025-06-03 04:26:37,434 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:36:39] 2025-06-03 04:26:37,435 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:36:39] 2025-06-03 04:26:37,435 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:36:39] 2025-06-03 04:26:37,865 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:36:39] 2025-06-03 04:26:37,866 | INFO     | aborting loop
[2025-06-03 06:36:39] 2025-06-03 04:26:37,996 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:36:39] 2025-06-03 04:26:38,319 | INFO     | all data control threads have been joined
[2025-06-03 06:36:39] 2025-06-03 04:26:38,330 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:38,337 | INFO     | [job] control thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:38,394 | INFO     | all payload control threads have been joined
[2025-06-03 06:36:39] 2025-06-03 04:26:38,592 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:38,609 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:36:39] 2025-06-03 04:26:38,711 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:38,716 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:38,871 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:38,945 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:38,954 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:36:39] 2025-06-03 04:26:39,054 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:39,057 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:39,325 | INFO     | [data] control thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:39,400 | INFO     | [payload] control thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:39,746 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:39,830 | INFO     | [job] validate thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:39,960 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:40,616 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:42,005 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:36:39] 2025-06-03 04:26:42,884 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140362999875392)>', '<ExcThread(monitor, started 140362349803264)>']
[2025-06-03 06:36:39] 2025-06-03 04:26:43,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:36:39] 2025-06-03 04:26:43,470 | INFO     | [monitor] control thread has ended
[2025-06-03 06:36:39] 2025-06-03 04:26:47,910 | INFO     | all workflow threads have been joined
[2025-06-03 06:36:39] 2025-06-03 04:26:47,911 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:36:39] 2025-06-03 04:26:47,911 | INFO     | traces error code: 0
[2025-06-03 06:36:39] 2025-06-03 04:26:47,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:36:39] 2025-06-03 04:26:48,184 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:36:39] 2025-06-03 04:26:48,189 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:36:39] 2025-06-03 04:26:48,195 [wrapper] pilotpid: 6364
[2025-06-03 06:36:39] 2025-06-03 04:26:48,200 [wrapper] Pilot exit status: 0
[2025-06-03 06:36:39] 2025-06-03 04:26:48,280 [wrapper] pandaids: 6665729639
[2025-06-03 06:36:39] 2025-06-03 04:26:49,059 [wrapper] cleanup supervisor_pilot 15079 6365
[2025-06-03 06:36:39] 2025-06-03 04:26:49,095 [wrapper] Test setup, not cleaning
[2025-06-03 06:36:39] 2025-06-03 04:26:49,164 [wrapper] apfmon messages muted
[2025-06-03 06:36:39] 2025-06-03 04:26:49,188 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:36:39] 2025-06-03 04:26:49,215 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:36:39]  *** Error codes and diagnostics ***
[2025-06-03 06:36:39]     "exeErrorCode": 0,
[2025-06-03 06:36:39]     "exeErrorDiag": "",
[2025-06-03 06:36:39]     "pilotErrorCode": 0,
[2025-06-03 06:36:39]     "pilotErrorDiag": "",
[2025-06-03 06:36:39]  *** Listing of results directory ***
[2025-06-03 06:36:39] total 413120
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc    495897 May 25 15:09 pilot3.tar.gz
[2025-06-03 06:36:39] -rwx------. 1 boinc boinc     37140 May 25 15:20 runpilot2-wrapper.sh
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc      5111 May 25 15:20 queuedata.json
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc       100 Jun  3 01:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:36:39] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 01:50 run_atlas
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc       105 Jun  3 01:50 job.xml
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc      6392 Jun  3 01:50 init_data.xml
[2025-06-03 06:36:39] -rw-r--r--. 2 boinc boinc 224003809 Jun  3 01:50 EVNT.44871834._001402.pool.root.1
[2025-06-03 06:36:39] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:50 start_atlas.sh
[2025-06-03 06:36:39] drwxrwx--x. 2 boinc boinc        68 Jun  3 01:50 shared
[2025-06-03 06:36:39] -rw-r--r--. 2 boinc boinc    508878 Jun  3 01:50 input.tar.gz
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc         0 Jun  3 01:50 boinc_lockfile
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc      2559 Jun  3 01:50 pandaJob.out
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc    988091 Jun  3 01:50 agis_schedconf.cvmfs.json
[2025-06-03 06:36:39] drwx------. 4 boinc boinc      4096 Jun  3 01:50 pilot3
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc 191457327 Jun  3 06:23 HITS.44871837._035169.pool.root.1
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc       531 Jun  3 06:23 boinc_task_state.xml
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc      1019 Jun  3 06:24 memory_monitor_summary.json
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc   1603667 Jun  3 06:24 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc    425078 Jun  3 06:24 log.44871837._035169.job.log.tgz.1
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc        95 Jun  3 06:26 pilot_heartbeat.json
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc      7691 Jun  3 06:26 heartbeat.json
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc      4416 Jun  3 06:26 pilotlog.txt
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc   1447962 Jun  3 06:26 log.44871837._035169.job.log.1
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc       357 Jun  3 06:26 output.list
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:26 runtime_log
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc   1894400 Jun  3 06:26 result.tar.gz
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc      8659 Jun  3 06:26 runtime_log.err
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc       657 Jun  3 06:26 EJQMDm0RQd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmrYOKDmXt0Ypm.diag
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:36 wrapper_checkpoint.txt
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:36 boinc_mmap_file
[2025-06-03 06:36:39] -rw-r--r--. 1 boinc boinc     20504 Jun  3 06:36 stderr.txt
[2025-06-03 06:36:39] HITS file was successfully produced:
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc 191457327 Jun  3 06:23 shared/HITS.pool.root.1
[2025-06-03 06:36:39]  *** Contents of shared directory: ***
[2025-06-03 06:36:39] total 408096
[2025-06-03 06:36:39] -rw-r--r--. 2 boinc boinc 224003809 Jun  3 01:50 ATLAS.root_0
[2025-06-03 06:36:39] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:50 start_atlas.sh
[2025-06-03 06:36:39] -rw-r--r--. 2 boinc boinc    508878 Jun  3 01:50 input.tar.gz
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc 191457327 Jun  3 06:23 HITS.pool.root.1
[2025-06-03 06:36:39] -rw-------. 1 boinc boinc   1894400 Jun  3 06:26 result.tar.gz
06:36:41 (32335): run_atlas exited; CPU time 62662.078546
06:36:41 (32335): called boinc_finish(0)

</stderr_txt>
]]>

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