Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:38:00 (12938): wrapper (7.7.26015): starting
08:38:00 (12938): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 08:38:00] Arguments: --nthreads 8
[2025-06-03 08:38:00] Threads: 8
[2025-06-03 08:38:00] Checking for CVMFS
[2025-06-03 08:38:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 08:38:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 08:38:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 08:38:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 08:38:01] 2.11.2.0 19526 31657 106428 146731 0 114 13437015 25165824 4362 130560 0 16458749 99.854 16970582 2081 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 08:38:01] CVMFS is ok
[2025-06-03 08:38:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 08:38:01] Checking for apptainer binary...
[2025-06-03 08:38:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 08:38:01] Running /usr/bin/apptainer --version
[2025-06-03 08:38:01] apptainer version 1.3.2-1.el7
[2025-06-03 08:38:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 08:38:03] cg-vwn225.simple-grid.lan
[2025-06-03 08:38:03] apptainer works
[2025-06-03 08:38:03] Set ATHENA_PROC_NUMBER=8
[2025-06-03 08:38:03] Set ATHENA_CORE_NUMBER=8
[2025-06-03 08:38:03] Starting ATLAS job with PandaID=6677387656
[2025-06-03 08:38:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:53:03]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:53:03] 2025-06-03 10:22:12,300 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:53:03] 2025-06-03 10:22:12,301 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:53:03] 2025-06-03 10:22:12,301 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:53:03] 2025-06-03 10:22:12,306 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:53:03] 2025-06-03 10:22:12,306 | INFO     | sum of square deviations: 3212467674.5
[2025-06-03 12:53:03] 2025-06-03 10:22:12,308 | INFO     | sum of deviations: -41197703864.5
[2025-06-03 12:53:03] 2025-06-03 10:22:12,308 | INFO     | mean x: 1748939391.5
[2025-06-03 12:53:03] 2025-06-03 10:22:12,308 | INFO     | mean y: 2517890.5825688075
[2025-06-03 12:53:03] 2025-06-03 10:22:12,308 | INFO     | -- intersect: 22431471090.614475
[2025-06-03 12:53:03] 2025-06-03 10:22:12,308 | INFO     | intersect: 22431471090.614475
[2025-06-03 12:53:03] 2025-06-03 10:22:12,309 | INFO     | chi2: 2.585449126107769
[2025-06-03 12:53:03] 2025-06-03 10:22:12,309 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,311 | INFO     | sum of deviations: -25581745374.99999
[2025-06-03 12:53:03] 2025-06-03 10:22:12,311 | INFO     | mean x: 1748939239.0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,311 | INFO     | mean y: 2528726.953051643
[2025-06-03 12:53:03] 2025-06-03 10:22:12,311 | INFO     | -- intersect: 14933815334.57992
[2025-06-03 12:53:03] 2025-06-03 10:22:12,311 | INFO     | intersect: 14933815334.57992
[2025-06-03 12:53:03] 2025-06-03 10:22:12,312 | INFO     | chi2: 1.8206467272520495
[2025-06-03 12:53:03] 2025-06-03 10:22:12,312 | INFO     | current chi2=1.8206467272520495 (change=29.581026798507587 %)
[2025-06-03 12:53:03] 2025-06-03 10:22:12,312 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,314 | INFO     | sum of deviations: -24555602764.999992
[2025-06-03 12:53:03] 2025-06-03 10:22:12,314 | INFO     | mean x: 1748939086.5
[2025-06-03 12:53:03] 2025-06-03 10:22:12,314 | INFO     | mean y: 2529486.3653846155
[2025-06-03 12:53:03] 2025-06-03 10:22:12,314 | INFO     | -- intersect: 15393531410.377625
[2025-06-03 12:53:03] 2025-06-03 10:22:12,314 | INFO     | intersect: 15393531410.377625
[2025-06-03 12:53:03] 2025-06-03 10:22:12,315 | INFO     | chi2: 1.8187579104863272
[2025-06-03 12:53:03] 2025-06-03 10:22:12,315 | INFO     | current chi2=1.8187579104863272 (change=0.10374427600093074 %)
[2025-06-03 12:53:03] 2025-06-03 10:22:12,315 | INFO     | right removable region: 207
[2025-06-03 12:53:03] 2025-06-03 10:22:12,315 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,324 | INFO     | sum of deviations: -77677323322.99998
[2025-06-03 12:53:03] 2025-06-03 10:22:12,324 | INFO     | mean x: 1748939544.0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,324 | INFO     | mean y: 2543415.234741784
[2025-06-03 12:53:03] 2025-06-03 10:22:12,325 | INFO     | -- intersect: 45340442089.08883
[2025-06-03 12:53:03] 2025-06-03 10:22:12,325 | INFO     | intersect: 45340442089.08883
[2025-06-03 12:53:03] 2025-06-03 10:22:12,325 | INFO     | chi2: 1.0120896206141377
[2025-06-03 12:53:03] 2025-06-03 10:22:12,325 | INFO     | current chi2=1.0120896206141377 (change=60.85439816262117 %)
[2025-06-03 12:53:03] 2025-06-03 10:22:12,326 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,327 | INFO     | sum of deviations: -75236704386.50002
[2025-06-03 12:53:03] 2025-06-03 10:22:12,327 | INFO     | mean x: 1748939696.5
[2025-06-03 12:53:03] 2025-06-03 10:22:12,328 | INFO     | mean y: 2541576.2740384615
[2025-06-03 12:53:03] 2025-06-03 10:22:12,328 | INFO     | -- intersect: 47159545903.56977
[2025-06-03 12:53:03] 2025-06-03 10:22:12,328 | INFO     | intersect: 47159545903.56977
[2025-06-03 12:53:03] 2025-06-03 10:22:12,328 | INFO     | chi2: 0.9999412750598996
[2025-06-03 12:53:03] 2025-06-03 10:22:12,328 | INFO     | current chi2=0.9999412750598996 (change=1.2003231044763025 %)
[2025-06-03 12:53:03] 2025-06-03 10:22:12,328 | INFO     | left removable region: 20
[2025-06-03 12:53:03] 2025-06-03 10:22:12,329 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,330 | INFO     | sum of deviations: -46079312892.00001
[2025-06-03 12:53:03] 2025-06-03 10:22:12,330 | INFO     | mean x: 1748939666.0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,330 | INFO     | mean y: 2545075.834224599
[2025-06-03 12:53:03] 2025-06-03 10:22:12,330 | INFO     | -- intersect: 39748231167.95003
[2025-06-03 12:53:03] 2025-06-03 10:22:12,330 | INFO     | intersect: 39748231167.95003
[2025-06-03 12:53:03] 2025-06-03 10:22:12,331 | INFO     | chi2: 0.19574767160791523
[2025-06-03 12:53:03] 2025-06-03 10:22:12,331 | INFO     | -- intersect: 39748231167.95003
[2025-06-03 12:53:03] 2025-06-03 10:22:12,331 | INFO     | current memory leak: -22.73 B/s (using 187 data points, chi2=0.20)
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | ..............................
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | . Timing measurements:
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | . get job = 0 s
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | . initial setup = 2 s
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | . payload setup = 15 s
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | . stage-in = 0 s
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | . payload execution = 13276 s
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | . stage-out = 3 s
[2025-06-03 12:53:03] 2025-06-03 10:22:12,332 | INFO     | . log creation = 1 s
[2025-06-03 12:53:03] 2025-06-03 10:22:12,333 | INFO     | ..............................
[2025-06-03 12:53:03] 2025-06-03 10:22:12,870 | INFO     | 
[2025-06-03 12:53:03] 2025-06-03 10:22:12,870 | INFO     | job summary report
[2025-06-03 12:53:03] 2025-06-03 10:22:12,870 | INFO     | --------------------------------------------------
[2025-06-03 12:53:03] 2025-06-03 10:22:12,870 | INFO     | PanDA job id: 6677387656
[2025-06-03 12:53:03] 2025-06-03 10:22:12,870 | INFO     | task id: 45006595
[2025-06-03 12:53:03] 2025-06-03 10:22:12,870 | INFO     | errors: (none)
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | pilot state: finished 
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | transexitcode: 0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | exeerrorcode: 0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | exeerrordiag: 
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | exitcode: 0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | exitmsg: OK
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | cpuconsumptiontime: 50261 s
[2025-06-03 12:53:03] 2025-06-03 10:22:12,871 | INFO     | nevents: 400
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | neventsw: 0
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | pid: 25223
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | pgrp: 25223
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | corecount: 8
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | event service: False
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | sizes: {0: 2405177, 1: 2405205, 12: 2405205, 14: 2405439, 23: 2405467, 13296: 2435235, 13302: 2444176, 13305: 2444232, 13397: 2444402}
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | --------------------------------------------------
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | 
[2025-06-03 12:53:03] 2025-06-03 10:22:12,872 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 12:53:03] 2025-06-03 10:22:13,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,415 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:53:03] 2025-06-03 10:22:13,417 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,417 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:53:03] 2025-06-03 10:22:13,417 | INFO     | job 6677387656 has completed (purged errors)
[2025-06-03 12:53:03] 2025-06-03 10:22:13,417 | INFO     | overall cleanup function is called
[2025-06-03 12:53:03] 2025-06-03 10:22:13,547 | INFO     | PID=16598 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 12:53:03] 2025-06-03 10:22:13,547 | INFO     | .. there are 9 such processes running
[2025-06-03 12:53:03] 2025-06-03 10:22:14,426 | INFO     | --- collectZombieJob: --- 10, [25223]
[2025-06-03 12:53:03] 2025-06-03 10:22:14,426 | INFO     | zombie collector waiting for pid 25223
[2025-06-03 12:53:03] 2025-06-03 10:22:14,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:53:03] 2025-06-03 10:22:14,426 | INFO     | collected zombie processes
[2025-06-03 12:53:03] 2025-06-03 10:22:14,426 | INFO     | will attempt to kill all subprocesses of pid=25223
[2025-06-03 12:53:03] 2025-06-03 10:22:14,582 | INFO     | process IDs to be killed: [25223] (in reverse order)
[2025-06-03 12:53:03] 2025-06-03 10:22:15,383 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:53:03] 2025-06-03 10:22:15,384 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:53:03] 2025-06-03 10:22:15,387 | INFO     | did not find any defunct processes belonging to 25223
[2025-06-03 12:53:03] 2025-06-03 10:22:15,390 | INFO     | did not find any defunct processes belonging to 25223
[2025-06-03 12:53:03] 2025-06-03 10:22:15,391 | INFO     | ready for new job
[2025-06-03 12:53:03] 2025-06-03 10:22:15,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:53:03] 2025-06-03 10:22:15,393 | INFO     | **************************************
[2025-06-03 12:53:03] 2025-06-03 10:22:15,393 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:53:03] 2025-06-03 10:22:15,393 | INFO     | **************************************
[2025-06-03 12:53:03] 2025-06-03 10:22:15,393 | INFO     | 
[2025-06-03 12:53:03] 2025-06-03 10:22:15,394 | INFO     | pilot is running in a VM
[2025-06-03 12:53:03] 2025-06-03 10:22:15,394 | INFO     | architecture information:
[2025-06-03 12:53:03] 2025-06-03 10:22:15,409 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:53:03] 2025-06-03 10:22:15,636 | INFO     | cat /etc/os-release:
[2025-06-03 12:53:03] NAME="CentOS Linux"
[2025-06-03 12:53:03] VERSION="7 (Core)"
[2025-06-03 12:53:03] ID="centos"
[2025-06-03 12:53:03] ID_LIKE="rhel fedora"
[2025-06-03 12:53:03] VERSION_ID="7"
[2025-06-03 12:53:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:53:03] ANSI_COLOR="0;31"
[2025-06-03 12:53:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:53:03] HOME_URL="https://www.centos.org/"
[2025-06-03 12:53:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:53:03] 
[2025-06-03 12:53:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:53:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:53:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:53:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:53:03] 
[2025-06-03 12:53:03] 2025-06-03 10:22:15,636 | INFO     | **************************************
[2025-06-03 12:53:03] 2025-06-03 10:22:16,141 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 12:53:03] 2025-06-03 10:22:16,428 | INFO     | sufficient remaining disk space (496876126208 B)
[2025-06-03 12:53:03] 2025-06-03 10:22:16,428 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:53:03] 2025-06-03 10:22:16,428 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:53:03] 2025-06-03 10:22:16,428 | INFO     | update_server=False
[2025-06-03 12:53:03] 2025-06-03 10:22:16,428 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:53:03] 2025-06-03 10:22:16,429 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:53:03] 2025-06-03 10:22:16,429 | INFO     | aborting loop
[2025-06-03 12:53:03] 2025-06-03 10:22:16,430 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:53:03] 2025-06-03 10:22:16,436 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:53:03] 2025-06-03 10:22:16,436 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:53:03] 2025-06-03 10:22:16,436 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:53:03] 2025-06-03 10:22:16,436 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:53:03] 2025-06-03 10:22:16,523 | INFO     | all job control threads have been joined
[2025-06-03 12:53:03] 2025-06-03 10:22:16,708 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:53:03] 2025-06-03 10:22:16,731 | INFO     | all payload control threads have been joined
[2025-06-03 12:53:03] 2025-06-03 10:22:17,033 | INFO     | all data control threads have been joined
[2025-06-03 12:53:03] 2025-06-03 10:22:17,435 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:17,439 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:17,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:53:03] 2025-06-03 10:22:17,529 | INFO     | [job] control thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:17,736 | INFO     | [payload] control thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:17,832 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,039 | INFO     | [data] control thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,081 | INFO     | [job] validate thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,409 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,412 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,437 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,442 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,477 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,499 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,776 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:18,961 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:20,717 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:53:03] 2025-06-03 10:22:21,260 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140167125546816)>', '<ExcThread(monitor, started 140166828111616)>']
[2025-06-03 12:53:03] 2025-06-03 10:22:21,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:53:03] 2025-06-03 10:22:21,467 | INFO     | [monitor] control thread has ended
[2025-06-03 12:53:03] 2025-06-03 10:22:26,285 | INFO     | all workflow threads have been joined
[2025-06-03 12:53:03] 2025-06-03 10:22:26,285 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:53:03] 2025-06-03 10:22:26,285 | INFO     | traces error code: 0
[2025-06-03 12:53:03] 2025-06-03 10:22:26,285 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:53:03] 2025-06-03 10:22:26,618 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:53:03] 2025-06-03 10:22:26,662 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:53:03] 2025-06-03 10:22:26,701 [wrapper] pilotpid: 16598
[2025-06-03 12:53:03] 2025-06-03 10:22:26,752 [wrapper] Pilot exit status: 0
[2025-06-03 12:53:03] 2025-06-03 10:22:27,142 [wrapper] pandaids: 6677387656
[2025-06-03 12:53:03] 2025-06-03 10:22:28,114 [wrapper] cleanup supervisor_pilot 26409 16599
[2025-06-03 12:53:03] 2025-06-03 10:22:28,232 [wrapper] Test setup, not cleaning
[2025-06-03 12:53:03] 2025-06-03 10:22:28,332 [wrapper] apfmon messages muted
[2025-06-03 12:53:03] 2025-06-03 10:22:28,412 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:53:03] 2025-06-03 10:22:28,454 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:53:03]  *** Error codes and diagnostics ***
[2025-06-03 12:53:03]     "exeErrorCode": 0,
[2025-06-03 12:53:03]     "exeErrorDiag": "",
[2025-06-03 12:53:03]     "pilotErrorCode": 0,
[2025-06-03 12:53:03]     "pilotErrorDiag": "",
[2025-06-03 12:53:03]  *** Listing of results directory ***
[2025-06-03 12:53:03] total 392412
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:29 queuedata.json
[2025-06-03 12:53:03] -rwx------. 1 boinc boinc     37140 Jun  2 19:29 runpilot2-wrapper.sh
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc       100 Jun  3 08:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:53:03] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 08:37 run_atlas
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc       105 Jun  3 08:37 job.xml
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc      6392 Jun  3 08:38 init_data.xml
[2025-06-03 12:53:03] -rw-r--r--. 2 boinc boinc 215811426 Jun  3 08:38 EVNT.45006593._000225.pool.root.1
[2025-06-03 12:53:03] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:38 start_atlas.sh
[2025-06-03 12:53:03] drwxrwx--x. 2 boinc boinc        68 Jun  3 08:38 shared
[2025-06-03 12:53:03] -rw-r--r--. 2 boinc boinc    508875 Jun  3 08:38 input.tar.gz
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc         0 Jun  3 08:38 boinc_lockfile
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc      2521 Jun  3 08:38 pandaJob.out
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc    986901 Jun  3 08:38 agis_schedconf.cvmfs.json
[2025-06-03 12:53:03] drwx------. 4 boinc boinc      4096 Jun  3 08:38 pilot3
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc 179105448 Jun  3 12:19 HITS.45006595._005617.pool.root.1
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc       531 Jun  3 12:19 boinc_task_state.xml
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc      1017 Jun  3 12:20 memory_monitor_summary.json
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc   1603667 Jun  3 12:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc    381155 Jun  3 12:20 log.45006595._005617.job.log.tgz.1
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc        95 Jun  3 12:21 pilot_heartbeat.json
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc      7687 Jun  3 12:22 heartbeat.json
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc      4539 Jun  3 12:22 pilotlog.txt
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc   1162304 Jun  3 12:22 log.45006595._005617.job.log.1
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc       357 Jun  3 12:22 output.list
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc       620 Jun  3 12:22 runtime_log
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc   1566720 Jun  3 12:22 result.tar.gz
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc       656 Jun  3 12:22 sLuLDm89Ng7n9Rq4apOajLDm4fhM0noT9bVof3QYDm0xVKDmaMyHhm.diag
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc      8659 Jun  3 12:22 runtime_log.err
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:53 boinc_mmap_file
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:53 wrapper_checkpoint.txt
[2025-06-03 12:53:03] -rw-r--r--. 1 boinc boinc     20603 Jun  3 12:53 stderr.txt
[2025-06-03 12:53:03] HITS file was successfully produced:
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc 179105448 Jun  3 12:19 shared/HITS.pool.root.1
[2025-06-03 12:53:03]  *** Contents of shared directory: ***
[2025-06-03 12:53:03] total 387712
[2025-06-03 12:53:03] -rw-r--r--. 2 boinc boinc 215811426 Jun  3 08:38 ATLAS.root_0
[2025-06-03 12:53:03] -rw-r--r--. 2 boinc boinc     15093 Jun  3 08:38 start_atlas.sh
[2025-06-03 12:53:03] -rw-r--r--. 2 boinc boinc    508875 Jun  3 08:38 input.tar.gz
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc 179105448 Jun  3 12:19 HITS.pool.root.1
[2025-06-03 12:53:03] -rw-------. 1 boinc boinc   1566720 Jun  3 12:22 result.tar.gz
12:53:05 (12938): run_atlas exited; CPU time 50423.201435
12:53:05 (12938): called boinc_finish(0)

</stderr_txt>
]]>

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