Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:06:09 (11288): wrapper (7.7.26015): starting
23:06:09 (11288): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 23:06:09] Arguments: --nthreads 8
[2025-06-02 23:06:09] Threads: 8
[2025-06-02 23:06:09] Checking for CVMFS
[2025-06-02 23:06:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 23:06:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 23:06:10] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 23:06:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 23:06:12] 2.11.2.0 7869 30858 90388 146718 3 16 22643756 25165825 4632 130560 0 15176457 99.772 18402172 1969 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 23:06:12] CVMFS is ok
[2025-06-02 23:06:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 23:06:12] Checking for apptainer binary...
[2025-06-02 23:06:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 23:06:12] Running /usr/bin/apptainer --version
[2025-06-02 23:06:12] apptainer version 1.3.2-1.el7
[2025-06-02 23:06:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 23:13:02] cg-vwn276.simple-grid.lan
[2025-06-02 23:13:02] apptainer works
[2025-06-02 23:13:02] Set ATHENA_PROC_NUMBER=8
[2025-06-02 23:13:02] Set ATHENA_CORE_NUMBER=8
[2025-06-02 23:13:02] Starting ATLAS job with PandaID=6677387628
[2025-06-02 23:13:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 03:20:59]  *** The last 200 lines of the pilot log: ***
[2025-06-03 03:20:59] 2025-06-03 00:52:30,154 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:20:59] 2025-06-03 00:52:32,659 | INFO     | monitor loop #922: job 0:6677387628 is in state 'finished'
[2025-06-03 03:20:59] 2025-06-03 00:52:32,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:20:59] 2025-06-03 00:52:35,171 | INFO     | monitor loop #923: job 0:6677387628 is in state 'finished'
[2025-06-03 03:20:59] 2025-06-03 00:52:35,171 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 03:20:59] 2025-06-03 00:52:35,389 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 03:20:59] 2025-06-03 00:52:35,389 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6677387628/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 03:20:59] 2025-06-03 00:52:35,390 | INFO     | extracted standard info from prmon json
[2025-06-03 03:20:59] 2025-06-03 00:52:35,391 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 03:20:59] 2025-06-03 00:52:35,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 03:20:59] 2025-06-03 00:52:35,391 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 03:20:59] 2025-06-03 00:52:35,391 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 03:20:59] 2025-06-03 00:52:35,395 | INFO     | fitting pss+swap vs Time
[2025-06-03 03:20:59] 2025-06-03 00:52:35,396 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,398 | INFO     | sum of deviations: -33007310632.999996
[2025-06-03 03:20:59] 2025-06-03 00:52:35,398 | INFO     | mean x: 1748905331.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,398 | INFO     | mean y: 2565338.192488263
[2025-06-03 03:20:59] 2025-06-03 00:52:35,398 | INFO     | -- intersect: 19267554997.536503
[2025-06-03 03:20:59] 2025-06-03 00:52:35,398 | INFO     | intersect: 19267554997.536503
[2025-06-03 03:20:59] 2025-06-03 00:52:35,399 | INFO     | chi2: 2.092936894563295
[2025-06-03 03:20:59] 2025-06-03 00:52:35,399 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,401 | INFO     | sum of deviations: -31362905725.500004
[2025-06-03 03:20:59] 2025-06-03 00:52:35,401 | INFO     | mean x: 1748905178.5
[2025-06-03 03:20:59] 2025-06-03 00:52:35,401 | INFO     | mean y: 2566558.2259615385
[2025-06-03 03:20:59] 2025-06-03 00:52:35,401 | INFO     | -- intersect: 19659880141.108406
[2025-06-03 03:20:59] 2025-06-03 00:52:35,401 | INFO     | intersect: 19659880141.108406
[2025-06-03 03:20:59] 2025-06-03 00:52:35,402 | INFO     | chi2: 2.09110501838339
[2025-06-03 03:20:59] 2025-06-03 00:52:35,402 | INFO     | current chi2=2.09110501838339 (change=0.0875265845168734 %)
[2025-06-03 03:20:59] 2025-06-03 00:52:35,402 | INFO     | right removable region: 207
[2025-06-03 03:20:59] 2025-06-03 00:52:35,403 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,404 | INFO     | sum of deviations: -74054349103.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,404 | INFO     | mean x: 1748905483.5
[2025-06-03 03:20:59] 2025-06-03 00:52:35,405 | INFO     | mean y: 2595467.6826923075
[2025-06-03 03:20:59] 2025-06-03 00:52:35,405 | INFO     | -- intersect: 46417612912.27301
[2025-06-03 03:20:59] 2025-06-03 00:52:35,405 | INFO     | intersect: 46417612912.27301
[2025-06-03 03:20:59] 2025-06-03 00:52:35,405 | INFO     | chi2: 0.24085020031226526
[2025-06-03 03:20:59] 2025-06-03 00:52:35,405 | INFO     | current chi2=0.24085020031226526 (change=88.49223782437453 %)
[2025-06-03 03:20:59] 2025-06-03 00:52:35,420 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,422 | INFO     | sum of deviations: -76300290169.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,422 | INFO     | mean x: 1748905636.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,422 | INFO     | mean y: 2597171.6896551726
[2025-06-03 03:20:59] 2025-06-03 00:52:35,422 | INFO     | -- intersect: 51446814957.55221
[2025-06-03 03:20:59] 2025-06-03 00:52:35,422 | INFO     | intersect: 51446814957.55221
[2025-06-03 03:20:59] 2025-06-03 00:52:35,423 | INFO     | chi2: 0.1891084608851625
[2025-06-03 03:20:59] 2025-06-03 00:52:35,423 | INFO     | current chi2=0.1891084608851625 (change=21.482954699651046 %)
[2025-06-03 03:20:59] 2025-06-03 00:52:35,423 | INFO     | left removable region: 20
[2025-06-03 03:20:59] 2025-06-03 00:52:35,423 | INFO     | sum of square deviations: 2027639878.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,425 | INFO     | sum of deviations: -65178087640.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,425 | INFO     | mean x: 1748905758.0
[2025-06-03 03:20:59] 2025-06-03 00:52:35,425 | INFO     | mean y: 2592580.0588235296
[2025-06-03 03:20:59] 2025-06-03 00:52:35,425 | INFO     | -- intersect: 56220826402.457855
[2025-06-03 03:20:59] 2025-06-03 00:52:35,425 | INFO     | intersect: 56220826402.457855
[2025-06-03 03:20:59] 2025-06-03 00:52:35,426 | INFO     | chi2: 0.1771024991947432
[2025-06-03 03:20:59] 2025-06-03 00:52:35,426 | INFO     | -- intersect: 56220826402.457855
[2025-06-03 03:20:59] 2025-06-03 00:52:35,426 | INFO     | current memory leak: -32.14 B/s (using 187 data points, chi2=0.18)
[2025-06-03 03:20:59] 2025-06-03 00:52:35,427 | INFO     | ..............................
[2025-06-03 03:20:59] 2025-06-03 00:52:35,427 | INFO     | . Timing measurements:
[2025-06-03 03:20:59] 2025-06-03 00:52:35,428 | INFO     | . get job = 0 s
[2025-06-03 03:20:59] 2025-06-03 00:52:35,428 | INFO     | . initial setup = 3 s
[2025-06-03 03:20:59] 2025-06-03 00:52:35,428 | INFO     | . payload setup = 15 s
[2025-06-03 03:20:59] 2025-06-03 00:52:35,428 | INFO     | . stage-in = 0 s
[2025-06-03 03:20:59] 2025-06-03 00:52:35,428 | INFO     | . payload execution = 13006 s
[2025-06-03 03:20:59] 2025-06-03 00:52:35,428 | INFO     | . stage-out = 4 s
[2025-06-03 03:20:59] 2025-06-03 00:52:35,428 | INFO     | . log creation = 1 s
[2025-06-03 03:20:59] 2025-06-03 00:52:35,428 | INFO     | ..............................
[2025-06-03 03:20:59] 2025-06-03 00:52:35,697 | INFO     | PID=18040 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 03:20:59] 2025-06-03 00:52:35,697 | INFO     | .. there are 9 such processes running
[2025-06-03 03:20:59] 2025-06-03 00:52:36,036 | INFO     | 
[2025-06-03 03:20:59] 2025-06-03 00:52:36,036 | INFO     | job summary report
[2025-06-03 03:20:59] 2025-06-03 00:52:36,036 | INFO     | --------------------------------------------------
[2025-06-03 03:20:59] 2025-06-03 00:52:36,036 | INFO     | PanDA job id: 6677387628
[2025-06-03 03:20:59] 2025-06-03 00:52:36,036 | INFO     | task id: 45006595
[2025-06-03 03:20:59] 2025-06-03 00:52:36,036 | INFO     | errors: (none)
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | pilot state: finished 
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | transexitcode: 0
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | exeerrorcode: 0
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | exeerrordiag: 
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | exitcode: 0
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | exitmsg: OK
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | cpuconsumptiontime: 49644 s
[2025-06-03 03:20:59] 2025-06-03 00:52:36,037 | INFO     | nevents: 400
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | neventsw: 0
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | pid: 28507
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | pgrp: 28507
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | corecount: 8
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | event service: False
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | sizes: {0: 2404349, 1: 2405205, 2: 2405205, 12: 2405467, 13025: 2434668, 13026: 2434667, 13031: 2443792, 13032: 2443848, 13124: 2444018}
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | --------------------------------------------------
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | 
[2025-06-03 03:20:59] 2025-06-03 00:52:36,038 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 03:20:59] 2025-06-03 00:52:36,391 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,391 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,391 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,391 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,392 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,393 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,393 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,393 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 03:20:59] 2025-06-03 00:52:36,393 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,393 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 03:20:59] 2025-06-03 00:52:36,393 | INFO     | job 6677387628 has completed (purged errors)
[2025-06-03 03:20:59] 2025-06-03 00:52:36,393 | INFO     | overall cleanup function is called
[2025-06-03 03:20:59] 2025-06-03 00:52:37,403 | INFO     | --- collectZombieJob: --- 10, [28507]
[2025-06-03 03:20:59] 2025-06-03 00:52:37,403 | INFO     | zombie collector waiting for pid 28507
[2025-06-03 03:20:59] 2025-06-03 00:52:37,403 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 03:20:59] 2025-06-03 00:52:37,403 | INFO     | collected zombie processes
[2025-06-03 03:20:59] 2025-06-03 00:52:37,403 | INFO     | will attempt to kill all subprocesses of pid=28507
[2025-06-03 03:20:59] 2025-06-03 00:52:37,507 | INFO     | process IDs to be killed: [28507] (in reverse order)
[2025-06-03 03:20:59] 2025-06-03 00:52:38,197 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 03:20:59] 2025-06-03 00:52:38,198 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 03:20:59] 2025-06-03 00:52:38,201 | INFO     | did not find any defunct processes belonging to 28507
[2025-06-03 03:20:59] 2025-06-03 00:52:38,204 | INFO     | did not find any defunct processes belonging to 28507
[2025-06-03 03:20:59] 2025-06-03 00:52:38,204 | INFO     | ready for new job
[2025-06-03 03:20:59] 2025-06-03 00:52:38,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 03:20:59] 2025-06-03 00:52:38,207 | INFO     | **************************************
[2025-06-03 03:20:59] 2025-06-03 00:52:38,207 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 03:20:59] 2025-06-03 00:52:38,207 | INFO     | **************************************
[2025-06-03 03:20:59] 2025-06-03 00:52:38,207 | INFO     | 
[2025-06-03 03:20:59] 2025-06-03 00:52:38,209 | INFO     | pilot is running in a VM
[2025-06-03 03:20:59] 2025-06-03 00:52:38,209 | INFO     | architecture information:
[2025-06-03 03:20:59] 2025-06-03 00:52:38,214 | INFO     | executing command: cat /etc/os-release
[2025-06-03 03:20:59] 2025-06-03 00:52:38,460 | INFO     | cat /etc/os-release:
[2025-06-03 03:20:59] NAME="CentOS Linux"
[2025-06-03 03:20:59] VERSION="7 (Core)"
[2025-06-03 03:20:59] ID="centos"
[2025-06-03 03:20:59] ID_LIKE="rhel fedora"
[2025-06-03 03:20:59] VERSION_ID="7"
[2025-06-03 03:20:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 03:20:59] ANSI_COLOR="0;31"
[2025-06-03 03:20:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 03:20:59] HOME_URL="https://www.centos.org/"
[2025-06-03 03:20:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 03:20:59] 
[2025-06-03 03:20:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 03:20:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 03:20:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 03:20:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 03:20:59] 
[2025-06-03 03:20:59] 2025-06-03 00:52:38,461 | INFO     | **************************************
[2025-06-03 03:20:59] 2025-06-03 00:52:38,965 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 03:20:59] 2025-06-03 00:52:39,216 | INFO     | sufficient remaining disk space (496964206592 B)
[2025-06-03 03:20:59] 2025-06-03 00:52:39,216 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 03:20:59] 2025-06-03 00:52:39,216 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 03:20:59] 2025-06-03 00:52:39,216 | INFO     | update_server=False
[2025-06-03 03:20:59] 2025-06-03 00:52:39,216 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 03:20:59] 2025-06-03 00:52:39,218 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:20:59] 2025-06-03 00:52:39,218 | INFO     | aborting loop
[2025-06-03 03:20:59] 2025-06-03 00:52:39,262 | INFO     | all payload control threads have been joined
[2025-06-03 03:20:59] 2025-06-03 00:52:39,499 | INFO     | all data control threads have been joined
[2025-06-03 03:20:59] 2025-06-03 00:52:39,713 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 03:20:59] 2025-06-03 00:52:39,713 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 03:20:59] 2025-06-03 00:52:39,713 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 03:20:59] 2025-06-03 00:52:40,085 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 03:20:59] 2025-06-03 00:52:40,223 | INFO     | [job] retrieve thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:40,224 | INFO     | [job] job monitor thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:40,235 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:40,268 | INFO     | [payload] control thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:40,375 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 03:20:59] 2025-06-03 00:52:40,402 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:40,459 | INFO     | all job control threads have been joined
[2025-06-03 03:20:59] 2025-06-03 00:52:40,505 | INFO     | [data] control thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:40,673 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:40,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 03:20:59] 2025-06-03 00:52:40,973 | INFO     | [payload] failed_post thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:41,072 | INFO     | [job] validate thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:41,201 | INFO     | [data] copytool_in thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:41,213 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:41,268 | INFO     | [payload] validate_post thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:41,465 | INFO     | [job] control thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:41,701 | INFO     | [job] queue monitor thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:42,382 | INFO     | [data] copytool_out thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:44,095 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 03:20:59] 2025-06-03 00:52:45,107 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140269230909248)>', '<ExcThread(monitor, started 140269012403968)>']
[2025-06-03 03:20:59] 2025-06-03 00:52:45,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 03:20:59] 2025-06-03 00:52:45,748 | INFO     | [monitor] control thread has ended
[2025-06-03 03:20:59] 2025-06-03 00:52:50,133 | INFO     | all workflow threads have been joined
[2025-06-03 03:20:59] 2025-06-03 00:52:50,133 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 03:20:59] 2025-06-03 00:52:50,133 | INFO     | traces error code: 0
[2025-06-03 03:20:59] 2025-06-03 00:52:50,133 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 03:20:59] 2025-06-03 00:52:50,577 [wrapper] ==== pilot stdout END ====
[2025-06-03 03:20:59] 2025-06-03 00:52:50,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 03:20:59] 2025-06-03 00:52:50,845 [wrapper] pilotpid: 18040
[2025-06-03 03:20:59] 2025-06-03 00:52:50,943 [wrapper] Pilot exit status: 0
[2025-06-03 03:20:59] 2025-06-03 00:52:51,374 [wrapper] pandaids: 6677387628
[2025-06-03 03:20:59] 2025-06-03 00:52:52,244 [wrapper] cleanup supervisor_pilot 15333 18041
[2025-06-03 03:20:59] 2025-06-03 00:52:52,343 [wrapper] Test setup, not cleaning
[2025-06-03 03:20:59] 2025-06-03 00:52:52,378 [wrapper] apfmon messages muted
[2025-06-03 03:20:59] 2025-06-03 00:52:52,406 [wrapper] ==== wrapper stdout END ====
[2025-06-03 03:20:59] 2025-06-03 00:52:52,438 [wrapper] ==== wrapper stderr END ====
[2025-06-03 03:20:59]  *** Error codes and diagnostics ***
[2025-06-03 03:20:59]     "exeErrorCode": 0,
[2025-06-03 03:20:59]     "exeErrorDiag": "",
[2025-06-03 03:20:59]     "pilotErrorCode": 0,
[2025-06-03 03:20:59]     "pilotErrorDiag": "",
[2025-06-03 03:20:59]  *** Listing of results directory ***
[2025-06-03 03:20:59] total 397564
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:29 queuedata.json
[2025-06-03 03:20:59] -rwx------. 1 boinc boinc     37140 Jun  2 19:30 runpilot2-wrapper.sh
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc       100 Jun  2 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 03:20:59] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 23:06 run_atlas
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc       105 Jun  2 23:06 job.xml
[2025-06-03 03:20:59] -rw-r--r--. 2 boinc boinc 218440193 Jun  2 23:06 EVNT.45006593._000224.pool.root.1
[2025-06-03 03:20:59] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:06 start_atlas.sh
[2025-06-03 03:20:59] drwxrwx--x. 2 boinc boinc        68 Jun  2 23:06 shared
[2025-06-03 03:20:59] -rw-r--r--. 2 boinc boinc    508872 Jun  2 23:06 input.tar.gz
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc      6390 Jun  2 23:06 init_data.xml
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc         0 Jun  2 23:06 boinc_lockfile
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc      2521 Jun  2 23:13 pandaJob.out
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc    987975 Jun  2 23:13 agis_schedconf.cvmfs.json
[2025-06-03 03:20:59] drwx------. 4 boinc boinc      4096 Jun  2 23:13 pilot3
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc 181802432 Jun  3 02:49 HITS.45006595._005589.pool.root.1
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc       530 Jun  3 02:50 boinc_task_state.xml
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc      1028 Jun  3 02:50 memory_monitor_summary.json
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc   1603667 Jun  3 02:50 agis_ddmendpoints.agis.ALL.json
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc    376593 Jun  3 02:51 log.45006595._005589.job.log.tgz.1
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc      7687 Jun  3 02:52 heartbeat.json
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc        95 Jun  3 02:52 pilot_heartbeat.json
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc      4416 Jun  3 02:52 pilotlog.txt
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc   1139922 Jun  3 02:52 log.45006595._005589.job.log.1
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc       357 Jun  3 02:52 output.list
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:52 runtime_log
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc   1536000 Jun  3 02:52 result.tar.gz
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc      8659 Jun  3 02:52 runtime_log.err
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc       656 Jun  3 02:52 O8xNDmbAOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmxkfKDmGbilSm.diag
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc      8192 Jun  3 03:20 boinc_mmap_file
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc        28 Jun  3 03:20 wrapper_checkpoint.txt
[2025-06-03 03:20:59] -rw-r--r--. 1 boinc boinc     20823 Jun  3 03:20 stderr.txt
[2025-06-03 03:20:59] HITS file was successfully produced:
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc 181802432 Jun  3 02:49 shared/HITS.pool.root.1
[2025-06-03 03:20:59]  *** Contents of shared directory: ***
[2025-06-03 03:20:59] total 392884
[2025-06-03 03:20:59] -rw-r--r--. 2 boinc boinc 218440193 Jun  2 23:06 ATLAS.root_0
[2025-06-03 03:20:59] -rw-r--r--. 2 boinc boinc     15093 Jun  2 23:06 start_atlas.sh
[2025-06-03 03:20:59] -rw-r--r--. 2 boinc boinc    508872 Jun  2 23:06 input.tar.gz
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc 181802432 Jun  3 02:49 HITS.pool.root.1
[2025-06-03 03:20:59] -rw-------. 1 boinc boinc   1536000 Jun  3 02:52 result.tar.gz
03:21:01 (11288): run_atlas exited; CPU time 49814.266058
03:21:01 (11288): called boinc_finish(0)

</stderr_txt>
]]>

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