Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:46 (4760): wrapper (7.7.26015): starting
02:46:46 (4760): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 02:46:46] Arguments: --nthreads 8
[2025-06-03 02:46:46] Threads: 8
[2025-06-03 02:46:46] Checking for CVMFS
[2025-06-03 02:46:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:46:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:46:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:46:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:46:48] 2.11.2.0 15360 31061 101484 146723 0 155 21818008 25165824 4632 130560 0 15826494 99.781 17482025 2084 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 02:46:48] CVMFS is ok
[2025-06-03 02:46:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:46:48] Checking for apptainer binary...
[2025-06-03 02:46:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:46:48] Running /usr/bin/apptainer --version
[2025-06-03 02:46:48] apptainer version 1.3.2-1.el7
[2025-06-03 02:46:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:54:33] cg-vwn250.simple-grid.lan
[2025-06-03 02:54:33] apptainer works
[2025-06-03 02:54:33] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:54:33] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:54:33] Starting ATLAS job with PandaID=6677387609
[2025-06-03 02:54:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/10 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:03:40]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:03:40] 2025-06-03 04:30:52,635 | INFO     | using path: /var/lib/boinc/slots/10/PanDA_Pilot-6677387609/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 11:03:40] 2025-06-03 04:30:52,636 | INFO     | extracted standard info from prmon json
[2025-06-03 11:03:40] 2025-06-03 04:30:52,636 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:03:40] 2025-06-03 04:30:52,636 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:03:40] 2025-06-03 04:30:52,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:03:40] 2025-06-03 04:30:52,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:03:40] 2025-06-03 04:30:52,641 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:03:40] 2025-06-03 04:30:52,641 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 11:03:40] 2025-06-03 04:30:52,643 | INFO     | sum of deviations: -51111814020.49999
[2025-06-03 11:03:40] 2025-06-03 04:30:52,643 | INFO     | mean x: 1748918521.5
[2025-06-03 11:03:40] 2025-06-03 04:30:52,643 | INFO     | mean y: 2541621.461904762
[2025-06-03 11:03:40] 2025-06-03 04:30:52,643 | INFO     | -- intersect: 31131487315.753086
[2025-06-03 11:03:40] 2025-06-03 04:30:52,643 | INFO     | intersect: 31131487315.753086
[2025-06-03 11:03:40] 2025-06-03 04:30:52,644 | INFO     | chi2: 2.8208643149830457
[2025-06-03 11:03:40] 2025-06-03 04:30:52,644 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,646 | INFO     | sum of deviations: -34548294707.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,646 | INFO     | mean x: 1748918369.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,646 | INFO     | mean y: 2554021.2926829266
[2025-06-03 11:03:40] 2025-06-03 04:30:52,646 | INFO     | -- intersect: 22621193687.80028
[2025-06-03 11:03:40] 2025-06-03 04:30:52,646 | INFO     | intersect: 22621193687.80028
[2025-06-03 11:03:40] 2025-06-03 04:30:52,646 | INFO     | chi2: 1.9775515258799212
[2025-06-03 11:03:40] 2025-06-03 04:30:52,647 | INFO     | current chi2=1.9775515258799212 (change=29.89554600779134 %)
[2025-06-03 11:03:40] 2025-06-03 04:30:52,647 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,648 | INFO     | sum of deviations: -32721109521.50001
[2025-06-03 11:03:40] 2025-06-03 04:30:52,649 | INFO     | mean x: 1748918216.5
[2025-06-03 11:03:40] 2025-06-03 04:30:52,649 | INFO     | mean y: 2555482.515
[2025-06-03 11:03:40] 2025-06-03 04:30:52,649 | INFO     | -- intersect: 23072150432.376503
[2025-06-03 11:03:40] 2025-06-03 04:30:52,649 | INFO     | intersect: 23072150432.376503
[2025-06-03 11:03:40] 2025-06-03 04:30:52,649 | INFO     | chi2: 1.9757440845360261
[2025-06-03 11:03:40] 2025-06-03 04:30:52,649 | INFO     | current chi2=1.9757440845360261 (change=0.09139793933262345 %)
[2025-06-03 11:03:40] 2025-06-03 04:30:52,649 | INFO     | right removable region: 199
[2025-06-03 11:03:40] 2025-06-03 04:30:52,650 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,657 | INFO     | sum of deviations: -89205819524.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,658 | INFO     | mean x: 1748918674.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,658 | INFO     | mean y: 2570377.717073171
[2025-06-03 11:03:40] 2025-06-03 04:30:52,658 | INFO     | -- intersect: 58405297833.79342
[2025-06-03 11:03:40] 2025-06-03 04:30:52,658 | INFO     | intersect: 58405297833.79342
[2025-06-03 11:03:40] 2025-06-03 04:30:52,659 | INFO     | chi2: 1.0841461977961226
[2025-06-03 11:03:40] 2025-06-03 04:30:52,659 | INFO     | current chi2=1.0841461977961226 (change=61.56687891588154 %)
[2025-06-03 11:03:40] 2025-06-03 04:30:52,659 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,661 | INFO     | sum of deviations: -87408888142.49998
[2025-06-03 11:03:40] 2025-06-03 04:30:52,661 | INFO     | mean x: 1748918826.5
[2025-06-03 11:03:40] 2025-06-03 04:30:52,661 | INFO     | mean y: 2568907.565
[2025-06-03 11:03:40] 2025-06-03 04:30:52,661 | INFO     | -- intersect: 61629096164.07516
[2025-06-03 11:03:40] 2025-06-03 04:30:52,661 | INFO     | intersect: 61629096164.07516
[2025-06-03 11:03:40] 2025-06-03 04:30:52,661 | INFO     | chi2: 1.0660733547601082
[2025-06-03 11:03:40] 2025-06-03 04:30:52,661 | INFO     | current chi2=1.0660733547601082 (change=1.6670116145546894 %)
[2025-06-03 11:03:40] 2025-06-03 04:30:52,662 | INFO     | left removable region: 20
[2025-06-03 11:03:40] 2025-06-03 04:30:52,662 | INFO     | sum of square deviations: 1778377530.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,663 | INFO     | sum of deviations: -58620130017.99999
[2025-06-03 11:03:40] 2025-06-03 04:30:52,663 | INFO     | mean x: 1748918796.0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,663 | INFO     | mean y: 2576615.374301676
[2025-06-03 11:03:40] 2025-06-03 04:30:52,663 | INFO     | -- intersect: 57651667139.16426
[2025-06-03 11:03:40] 2025-06-03 04:30:52,664 | INFO     | intersect: 57651667139.16426
[2025-06-03 11:03:40] 2025-06-03 04:30:52,664 | INFO     | chi2: 0.17850367185629806
[2025-06-03 11:03:40] 2025-06-03 04:30:52,664 | INFO     | -- intersect: 57651667139.16426
[2025-06-03 11:03:40] 2025-06-03 04:30:52,664 | INFO     | current memory leak: -32.96 B/s (using 179 data points, chi2=0.18)
[2025-06-03 11:03:40] 2025-06-03 04:30:52,665 | INFO     | ..............................
[2025-06-03 11:03:40] 2025-06-03 04:30:52,665 | INFO     | . Timing measurements:
[2025-06-03 11:03:40] 2025-06-03 04:30:52,665 | INFO     | . get job = 0 s
[2025-06-03 11:03:40] 2025-06-03 04:30:52,665 | INFO     | . initial setup = 2 s
[2025-06-03 11:03:40] 2025-06-03 04:30:52,665 | INFO     | . payload setup = 12 s
[2025-06-03 11:03:40] 2025-06-03 04:30:52,665 | INFO     | . stage-in = 0 s
[2025-06-03 11:03:40] 2025-06-03 04:30:52,665 | INFO     | . payload execution = 12826 s
[2025-06-03 11:03:40] 2025-06-03 04:30:52,666 | INFO     | . stage-out = 3 s
[2025-06-03 11:03:40] 2025-06-03 04:30:52,666 | INFO     | . log creation = 1 s
[2025-06-03 11:03:40] 2025-06-03 04:30:52,666 | INFO     | ..............................
[2025-06-03 11:03:40] 2025-06-03 04:30:52,827 | INFO     | 
[2025-06-03 11:03:40] 2025-06-03 04:30:52,827 | INFO     | job summary report
[2025-06-03 11:03:40] 2025-06-03 04:30:52,827 | INFO     | --------------------------------------------------
[2025-06-03 11:03:40] 2025-06-03 04:30:52,827 | INFO     | PanDA job id: 6677387609
[2025-06-03 11:03:40] 2025-06-03 04:30:52,827 | INFO     | task id: 45006595
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | errors: (none)
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | pilot state: finished 
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | transexitcode: 0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | exeerrorcode: 0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | exeerrordiag: 
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | exitcode: 0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | exitmsg: OK
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | cpuconsumptiontime: 48873 s
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | nevents: 400
[2025-06-03 11:03:40] 2025-06-03 04:30:52,828 | INFO     | neventsw: 0
[2025-06-03 11:03:40] 2025-06-03 04:30:52,829 | INFO     | pid: 22978
[2025-06-03 11:03:40] 2025-06-03 04:30:52,829 | INFO     | pgrp: 22978
[2025-06-03 11:03:40] 2025-06-03 04:30:52,829 | INFO     | corecount: 8
[2025-06-03 11:03:40] 2025-06-03 04:30:52,829 | INFO     | event service: False
[2025-06-03 11:03:40] 2025-06-03 04:30:52,829 | INFO     | sizes: {0: 2405007, 1: 2405206, 10: 2405412, 12: 2405440, 12843: 2434729, 12847: 2443672, 12849: 2443856, 12941: 2444026}
[2025-06-03 11:03:40] 2025-06-03 04:30:52,829 | INFO     | --------------------------------------------------
[2025-06-03 11:03:40] 2025-06-03 04:30:52,829 | INFO     | 
[2025-06-03 11:03:40] 2025-06-03 04:30:52,829 | INFO     | executing command: ls -lF /var/lib/boinc/slots/10
[2025-06-03 11:03:40] 2025-06-03 04:30:53,350 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,351 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,351 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,351 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,351 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,351 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,351 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,352 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,353 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,353 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:03:40] 2025-06-03 04:30:53,353 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,353 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:03:40] 2025-06-03 04:30:53,353 | INFO     | job 6677387609 has completed (purged errors)
[2025-06-03 11:03:40] 2025-06-03 04:30:53,353 | INFO     | overall cleanup function is called
[2025-06-03 11:03:40] 2025-06-03 04:30:54,362 | INFO     | --- collectZombieJob: --- 10, [22978]
[2025-06-03 11:03:40] 2025-06-03 04:30:54,362 | INFO     | zombie collector waiting for pid 22978
[2025-06-03 11:03:40] 2025-06-03 04:30:54,362 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:03:40] 2025-06-03 04:30:54,363 | INFO     | collected zombie processes
[2025-06-03 11:03:40] 2025-06-03 04:30:54,363 | INFO     | will attempt to kill all subprocesses of pid=22978
[2025-06-03 11:03:40] 2025-06-03 04:30:54,511 | INFO     | process IDs to be killed: [22978] (in reverse order)
[2025-06-03 11:03:40] 2025-06-03 04:30:55,412 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:03:40] 2025-06-03 04:30:55,413 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:03:40] 2025-06-03 04:30:55,417 | INFO     | did not find any defunct processes belonging to 22978
[2025-06-03 11:03:40] 2025-06-03 04:30:55,420 | INFO     | did not find any defunct processes belonging to 22978
[2025-06-03 11:03:40] 2025-06-03 04:30:55,421 | INFO     | ready for new job
[2025-06-03 11:03:40] 2025-06-03 04:30:55,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:03:40] 2025-06-03 04:30:55,423 | INFO     | **************************************
[2025-06-03 11:03:40] 2025-06-03 04:30:55,423 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:03:40] 2025-06-03 04:30:55,423 | INFO     | **************************************
[2025-06-03 11:03:40] 2025-06-03 04:30:55,423 | INFO     | 
[2025-06-03 11:03:40] 2025-06-03 04:30:55,424 | INFO     | pilot is running in a VM
[2025-06-03 11:03:40] 2025-06-03 04:30:55,424 | INFO     | architecture information:
[2025-06-03 11:03:40] 2025-06-03 04:30:55,430 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:03:40] 2025-06-03 04:30:55,640 | INFO     | cat /etc/os-release:
[2025-06-03 11:03:40] NAME="CentOS Linux"
[2025-06-03 11:03:40] VERSION="7 (Core)"
[2025-06-03 11:03:40] ID="centos"
[2025-06-03 11:03:40] ID_LIKE="rhel fedora"
[2025-06-03 11:03:40] VERSION_ID="7"
[2025-06-03 11:03:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:03:40] ANSI_COLOR="0;31"
[2025-06-03 11:03:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:03:40] HOME_URL="https://www.centos.org/"
[2025-06-03 11:03:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:03:40] 
[2025-06-03 11:03:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:03:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:03:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:03:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:03:40] 
[2025-06-03 11:03:40] 2025-06-03 04:30:55,641 | INFO     | **************************************
[2025-06-03 11:03:40] 2025-06-03 04:30:56,144 | INFO     | executing command: df -mP /var/lib/boinc/slots/10
[2025-06-03 11:03:40] 2025-06-03 04:30:56,339 | INFO     | sufficient remaining disk space (496948477952 B)
[2025-06-03 11:03:40] 2025-06-03 04:30:56,339 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:03:40] 2025-06-03 04:30:56,339 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:03:40] 2025-06-03 04:30:56,339 | INFO     | update_server=False
[2025-06-03 11:03:40] 2025-06-03 04:30:56,339 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:03:40] 2025-06-03 04:30:56,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:03:40] 2025-06-03 04:30:56,340 | INFO     | aborting loop
[2025-06-03 11:03:40] 2025-06-03 04:30:56,562 | INFO     | all job control threads have been joined
[2025-06-03 11:03:40] 2025-06-03 04:30:56,570 | INFO     | all payload control threads have been joined
[2025-06-03 11:03:40] 2025-06-03 04:30:56,735 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:03:40] 2025-06-03 04:30:56,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:03:40] 2025-06-03 04:30:56,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:03:40] 2025-06-03 04:30:57,335 | INFO     | all data control threads have been joined
[2025-06-03 11:03:40] 2025-06-03 04:30:57,345 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:57,346 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:57,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:03:40] 2025-06-03 04:30:57,413 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:57,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:03:40] 2025-06-03 04:30:57,568 | INFO     | [job] control thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:57,576 | INFO     | [payload] control thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:57,764 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:57,843 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:03:40] 2025-06-03 04:30:57,896 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:57,920 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:58,336 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:58,341 | INFO     | [data] control thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:58,603 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:58,604 | INFO     | [job] validate thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:58,611 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:58,849 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:30:59,389 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:31:01,521 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:03:40] 2025-06-03 04:31:02,962 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140526517237568)>', '<ExcThread(monitor, started 140526087038720)>']
[2025-06-03 11:03:40] 2025-06-03 04:31:03,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:03:40] 2025-06-03 04:31:03,778 | INFO     | [monitor] control thread has ended
[2025-06-03 11:03:40] 2025-06-03 04:31:07,988 | INFO     | all workflow threads have been joined
[2025-06-03 11:03:40] 2025-06-03 04:31:07,988 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:03:40] 2025-06-03 04:31:07,989 | INFO     | traces error code: 0
[2025-06-03 11:03:40] 2025-06-03 04:31:07,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:03:40] 2025-06-03 04:31:08,376 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:03:40] 2025-06-03 04:31:08,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:03:40] 2025-06-03 04:31:08,460 [wrapper] pilotpid: 14434
[2025-06-03 11:03:40] 2025-06-03 04:31:08,523 [wrapper] Pilot exit status: 0
[2025-06-03 11:03:40] 2025-06-03 04:31:08,735 [wrapper] pandaids: 6677387609
[2025-06-03 11:03:40] 2025-06-03 04:31:09,507 [wrapper] cleanup supervisor_pilot  5855 14435
[2025-06-03 11:03:40] 2025-06-03 04:31:09,566 [wrapper] Test setup, not cleaning
[2025-06-03 11:03:40] 2025-06-03 04:31:09,587 [wrapper] apfmon messages muted
[2025-06-03 11:03:40] 2025-06-03 04:31:09,677 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:03:40] 2025-06-03 04:31:09,816 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:03:40]  *** Error codes and diagnostics ***
[2025-06-03 11:03:40]     "exeErrorCode": 0,
[2025-06-03 11:03:40]     "exeErrorDiag": "",
[2025-06-03 11:03:40]     "pilotErrorCode": 0,
[2025-06-03 11:03:40]     "pilotErrorDiag": "",
[2025-06-03 11:03:40]  *** Listing of results directory ***
[2025-06-03 11:03:40] total 391136
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 11:03:40] -rwx------. 1 boinc boinc     37140 Jun  2 19:27 runpilot2-wrapper.sh
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:27 queuedata.json
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc       100 Jun  3 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:03:40] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 02:46 run_atlas
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc       105 Jun  3 02:46 job.xml
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc      6393 Jun  3 02:46 init_data.xml
[2025-06-03 11:03:40] -rw-r--r--. 2 boinc boinc 216698836 Jun  3 02:46 EVNT.45006593._000223.pool.root.1
[2025-06-03 11:03:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:46 start_atlas.sh
[2025-06-03 11:03:40] drwxrwx--x. 2 boinc boinc        68 Jun  3 02:46 shared
[2025-06-03 11:03:40] -rw-r--r--. 2 boinc boinc    508873 Jun  3 02:46 input.tar.gz
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc         0 Jun  3 02:46 boinc_lockfile
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc      2521 Jun  3 02:54 pandaJob.out
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc    988081 Jun  3 02:54 agis_schedconf.cvmfs.json
[2025-06-03 11:03:40] drwx------. 4 boinc boinc      4096 Jun  3 02:54 pilot3
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc 176991959 Jun  3 06:28 HITS.45006595._005570.pool.root.1
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc       531 Jun  3 06:28 boinc_task_state.xml
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc      1017 Jun  3 06:29 memory_monitor_summary.json
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc   1603667 Jun  3 06:29 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc    381367 Jun  3 06:29 log.45006595._005570.job.log.tgz.1
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc        95 Jun  3 06:30 pilot_heartbeat.json
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc      7687 Jun  3 06:30 heartbeat.json
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc      4417 Jun  3 06:31 pilotlog.txt
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc   1122625 Jun  3 06:31 log.45006595._005570.job.log.1
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc       357 Jun  3 06:31 output.list
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:31 runtime_log
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc   1525760 Jun  3 06:31 result.tar.gz
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc      8673 Jun  3 06:31 runtime_log.err
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc       656 Jun  3 06:31 17FODme7Ng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtjfKDmTtb2sn.diag
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:03 boinc_mmap_file
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:03 wrapper_checkpoint.txt
[2025-06-03 11:03:40] -rw-r--r--. 1 boinc boinc     20477 Jun  3 11:03 stderr.txt
[2025-06-03 11:03:40] HITS file was successfully produced:
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc 176991959 Jun  3 06:28 shared/HITS.pool.root.1
[2025-06-03 11:03:40]  *** Contents of shared directory: ***
[2025-06-03 11:03:40] total 386472
[2025-06-03 11:03:40] -rw-r--r--. 2 boinc boinc 216698836 Jun  3 02:46 ATLAS.root_0
[2025-06-03 11:03:40] -rw-r--r--. 2 boinc boinc     15093 Jun  3 02:46 start_atlas.sh
[2025-06-03 11:03:40] -rw-r--r--. 2 boinc boinc    508873 Jun  3 02:46 input.tar.gz
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc 176991959 Jun  3 06:28 HITS.pool.root.1
[2025-06-03 11:03:40] -rw-------. 1 boinc boinc   1525760 Jun  3 06:31 result.tar.gz
11:03:42 (4760): run_atlas exited; CPU time 49030.529692
11:03:42 (4760): called boinc_finish(0)

</stderr_txt>
]]>

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