Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:44:30 (21656): wrapper (7.7.26015): starting
05:44:30 (21656): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:44:30] Arguments: --nthreads 8
[2025-06-03 05:44:30] Threads: 8
[2025-06-03 05:44:30] Checking for CVMFS
[2025-06-03 05:44:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:44:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:44:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:44:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:44:30] 2.11.2.0 1205 31232 90600 146724 1 154 16391849 25165825 4353 130560 0 15694876 99.797 17675725 2172 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 05:44:30] CVMFS is ok
[2025-06-03 05:44:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:44:30] Checking for apptainer binary...
[2025-06-03 05:44:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:44:31] Running /usr/bin/apptainer --version
[2025-06-03 05:44:31] apptainer version 1.3.2-1.el7
[2025-06-03 05:44:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:44:32] cg-vwn325.simple-grid.lan
[2025-06-03 05:44:32] apptainer works
[2025-06-03 05:44:32] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:44:32] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:44:32] Starting ATLAS job with PandaID=6677385836
[2025-06-03 05:44:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/19 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 12:31:06]  *** The last 200 lines of the pilot log: ***
[2025-06-03 12:31:06] 2025-06-03 07:26:25,952 | INFO     | extracted standard info from prmon json
[2025-06-03 12:31:06] 2025-06-03 07:26:25,952 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 12:31:06] 2025-06-03 07:26:25,952 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 12:31:06] 2025-06-03 07:26:25,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 12:31:06] 2025-06-03 07:26:25,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 12:31:06] 2025-06-03 07:26:25,957 | INFO     | fitting pss+swap vs Time
[2025-06-03 12:31:06] 2025-06-03 07:26:25,958 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 12:31:06] 2025-06-03 07:26:25,960 | INFO     | sum of deviations: 3951776023.499981
[2025-06-03 12:31:06] 2025-06-03 07:26:25,960 | INFO     | mean x: 1748928906.5
[2025-06-03 12:31:06] 2025-06-03 07:26:25,960 | INFO     | mean y: 2475772.7731481483
[2025-06-03 12:31:06] 2025-06-03 07:26:25,960 | INFO     | -- intersect: -2209264413.3684397
[2025-06-03 12:31:06] 2025-06-03 07:26:25,960 | INFO     | intersect: -2209264413.3684397
[2025-06-03 12:31:06] 2025-06-03 07:26:25,961 | INFO     | chi2: 2.3916509631365823
[2025-06-03 12:31:06] 2025-06-03 07:26:25,970 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 12:31:06] 2025-06-03 07:26:25,971 | INFO     | sum of deviations: 17996138199.000008
[2025-06-03 12:31:06] 2025-06-03 07:26:25,972 | INFO     | mean x: 1748928754.0
[2025-06-03 12:31:06] 2025-06-03 07:26:25,972 | INFO     | mean y: 2485682.1611374407
[2025-06-03 12:31:06] 2025-06-03 07:26:25,972 | INFO     | -- intersect: -10802778826.083147
[2025-06-03 12:31:06] 2025-06-03 07:26:25,972 | INFO     | intersect: -10802778826.083147
[2025-06-03 12:31:06] 2025-06-03 07:26:25,972 | INFO     | chi2: 1.622731064139251
[2025-06-03 12:31:06] 2025-06-03 07:26:25,972 | INFO     | current chi2=1.622731064139251 (change=32.15017202965581 %)
[2025-06-03 12:31:06] 2025-06-03 07:26:25,973 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 12:31:06] 2025-06-03 07:26:25,974 | INFO     | sum of deviations: 17547749921.5
[2025-06-03 12:31:06] 2025-06-03 07:26:25,975 | INFO     | mean x: 1748928601.5
[2025-06-03 12:31:06] 2025-06-03 07:26:25,975 | INFO     | mean y: 2485343.9368932038
[2025-06-03 12:31:06] 2025-06-03 07:26:25,975 | INFO     | -- intersect: -11319528088.541315
[2025-06-03 12:31:06] 2025-06-03 07:26:25,975 | INFO     | intersect: -11319528088.541315
[2025-06-03 12:31:06] 2025-06-03 07:26:25,975 | INFO     | chi2: 1.6237382441124315
[2025-06-03 12:31:06] 2025-06-03 07:26:25,975 | INFO     | current chi2=1.6237382441124315 (change=-0.06206696817718232 %)
[2025-06-03 12:31:06] 2025-06-03 07:26:25,976 | INFO     | right removable region: 205
[2025-06-03 12:31:06] 2025-06-03 07:26:25,976 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 12:31:06] 2025-06-03 07:26:25,978 | INFO     | sum of deviations: -29572437965.0
[2025-06-03 12:31:06] 2025-06-03 07:26:25,978 | INFO     | mean x: 1748929059.0
[2025-06-03 12:31:06] 2025-06-03 07:26:25,978 | INFO     | mean y: 2499646.194312796
[2025-06-03 12:31:06] 2025-06-03 07:26:25,978 | INFO     | -- intersect: 17758424087.152912
[2025-06-03 12:31:06] 2025-06-03 07:26:25,978 | INFO     | intersect: 17758424087.152912
[2025-06-03 12:31:06] 2025-06-03 07:26:25,979 | INFO     | chi2: 0.9235229966240106
[2025-06-03 12:31:06] 2025-06-03 07:26:25,979 | INFO     | current chi2=0.9235229966240106 (change=61.38554451052354 %)
[2025-06-03 12:31:06] 2025-06-03 07:26:25,979 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 12:31:06] 2025-06-03 07:26:25,981 | INFO     | sum of deviations: -28841035643.0
[2025-06-03 12:31:06] 2025-06-03 07:26:25,981 | INFO     | mean x: 1748929211.5
[2025-06-03 12:31:06] 2025-06-03 07:26:25,981 | INFO     | mean y: 2499057.009708738
[2025-06-03 12:31:06] 2025-06-03 07:26:25,981 | INFO     | -- intersect: 18611078978.03399
[2025-06-03 12:31:06] 2025-06-03 07:26:25,982 | INFO     | intersect: 18611078978.03399
[2025-06-03 12:31:06] 2025-06-03 07:26:25,982 | INFO     | chi2: 0.9102001370429913
[2025-06-03 12:31:06] 2025-06-03 07:26:25,982 | INFO     | current chi2=0.9102001370429913 (change=1.4426126506564274 %)
[2025-06-03 12:31:06] 2025-06-03 07:26:25,982 | INFO     | left removable region: 20
[2025-06-03 12:31:06] 2025-06-03 07:26:25,983 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 12:31:06] 2025-06-03 07:26:26,001 | INFO     | sum of deviations: -857719230.9999998
[2025-06-03 12:31:06] 2025-06-03 07:26:26,002 | INFO     | mean x: 1748929181.0
[2025-06-03 12:31:06] 2025-06-03 07:26:26,002 | INFO     | mean y: 2498098.9027027027
[2025-06-03 12:31:06] 2025-06-03 07:26:26,002 | INFO     | -- intersect: 766573911.5092279
[2025-06-03 12:31:06] 2025-06-03 07:26:26,002 | INFO     | intersect: 766573911.5092279
[2025-06-03 12:31:06] 2025-06-03 07:26:26,002 | INFO     | chi2: 0.04934457933346293
[2025-06-03 12:31:06] 2025-06-03 07:26:26,003 | INFO     | -- intersect: 766573911.5092279
[2025-06-03 12:31:06] 2025-06-03 07:26:26,003 | INFO     | current memory leak: -0.44 B/s (using 185 data points, chi2=0.05)
[2025-06-03 12:31:06] 2025-06-03 07:26:26,004 | INFO     | ..............................
[2025-06-03 12:31:06] 2025-06-03 07:26:26,004 | INFO     | . Timing measurements:
[2025-06-03 12:31:06] 2025-06-03 07:26:26,004 | INFO     | . get job = 0 s
[2025-06-03 12:31:06] 2025-06-03 07:26:26,004 | INFO     | . initial setup = 2 s
[2025-06-03 12:31:06] 2025-06-03 07:26:26,004 | INFO     | . payload setup = 14 s
[2025-06-03 12:31:06] 2025-06-03 07:26:26,004 | INFO     | . stage-in = 0 s
[2025-06-03 12:31:06] 2025-06-03 07:26:26,004 | INFO     | . payload execution = 13167 s
[2025-06-03 12:31:06] 2025-06-03 07:26:26,004 | INFO     | . stage-out = 3 s
[2025-06-03 12:31:06] 2025-06-03 07:26:26,005 | INFO     | . log creation = 0 s
[2025-06-03 12:31:06] 2025-06-03 07:26:26,005 | INFO     | ..............................
[2025-06-03 12:31:06] 2025-06-03 07:26:26,408 | INFO     | 
[2025-06-03 12:31:06] 2025-06-03 07:26:26,408 | INFO     | job summary report
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | --------------------------------------------------
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | PanDA job id: 6677385836
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | task id: 45006595
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | errors: (none)
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | pilot state: finished 
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | transexitcode: 0
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | exeerrorcode: 0
[2025-06-03 12:31:06] 2025-06-03 07:26:26,409 | INFO     | exeerrordiag: 
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | exitcode: 0
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | exitmsg: OK
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | cpuconsumptiontime: 48645 s
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | nevents: 400
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | neventsw: 0
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | pid: 1559
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | pgrp: 1559
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | corecount: 8
[2025-06-03 12:31:06] 2025-06-03 07:26:26,410 | INFO     | event service: False
[2025-06-03 12:31:06] 2025-06-03 07:26:26,411 | INFO     | sizes: {0: 2405178, 1: 2405178, 10: 2405412, 12: 2405440, 13185: 2435053, 13186: 2435052, 13190: 2444179, 13191: 2444235, 13272: 2444405}
[2025-06-03 12:31:06] 2025-06-03 07:26:26,411 | INFO     | --------------------------------------------------
[2025-06-03 12:31:06] 2025-06-03 07:26:26,411 | INFO     | 
[2025-06-03 12:31:06] 2025-06-03 07:26:26,411 | INFO     | executing command: ls -lF /var/lib/boinc/slots/19
[2025-06-03 12:31:06] 2025-06-03 07:26:26,717 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,717 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,717 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,717 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,717 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,717 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,718 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,719 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 12:31:06] 2025-06-03 07:26:26,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 12:31:06] 2025-06-03 07:26:26,719 | INFO     | job 6677385836 has completed (purged errors)
[2025-06-03 12:31:06] 2025-06-03 07:26:26,719 | INFO     | overall cleanup function is called
[2025-06-03 12:31:06] 2025-06-03 07:26:27,728 | INFO     | --- collectZombieJob: --- 10, [1559]
[2025-06-03 12:31:06] 2025-06-03 07:26:27,728 | INFO     | zombie collector waiting for pid 1559
[2025-06-03 12:31:06] 2025-06-03 07:26:27,728 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 12:31:06] 2025-06-03 07:26:27,729 | INFO     | collected zombie processes
[2025-06-03 12:31:06] 2025-06-03 07:26:27,729 | INFO     | will attempt to kill all subprocesses of pid=1559
[2025-06-03 12:31:06] 2025-06-03 07:26:27,834 | INFO     | process IDs to be killed: [1559] (in reverse order)
[2025-06-03 12:31:06] 2025-06-03 07:26:27,959 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 12:31:06] 2025-06-03 07:26:27,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 12:31:06] 2025-06-03 07:26:27,963 | INFO     | did not find any defunct processes belonging to 1559
[2025-06-03 12:31:06] 2025-06-03 07:26:27,966 | INFO     | did not find any defunct processes belonging to 1559
[2025-06-03 12:31:06] 2025-06-03 07:26:27,966 | INFO     | ready for new job
[2025-06-03 12:31:06] 2025-06-03 07:26:27,967 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 12:31:06] 2025-06-03 07:26:27,968 | INFO     | **************************************
[2025-06-03 12:31:06] 2025-06-03 07:26:27,969 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 12:31:06] 2025-06-03 07:26:27,969 | INFO     | **************************************
[2025-06-03 12:31:06] 2025-06-03 07:26:27,969 | INFO     | 
[2025-06-03 12:31:06] 2025-06-03 07:26:27,969 | INFO     | pilot is running in a VM
[2025-06-03 12:31:06] 2025-06-03 07:26:27,969 | INFO     | architecture information:
[2025-06-03 12:31:06] 2025-06-03 07:26:27,970 | INFO     | executing command: cat /etc/os-release
[2025-06-03 12:31:06] 2025-06-03 07:26:28,093 | INFO     | cat /etc/os-release:
[2025-06-03 12:31:06] NAME="CentOS Linux"
[2025-06-03 12:31:06] VERSION="7 (Core)"
[2025-06-03 12:31:06] ID="centos"
[2025-06-03 12:31:06] ID_LIKE="rhel fedora"
[2025-06-03 12:31:06] VERSION_ID="7"
[2025-06-03 12:31:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 12:31:06] ANSI_COLOR="0;31"
[2025-06-03 12:31:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 12:31:06] HOME_URL="https://www.centos.org/"
[2025-06-03 12:31:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 12:31:06] 
[2025-06-03 12:31:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 12:31:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 12:31:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 12:31:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 12:31:06] 
[2025-06-03 12:31:06] 2025-06-03 07:26:28,094 | INFO     | **************************************
[2025-06-03 12:31:06] 2025-06-03 07:26:28,597 | INFO     | executing command: df -mP /var/lib/boinc/slots/19
[2025-06-03 12:31:06] 2025-06-03 07:26:28,790 | INFO     | sufficient remaining disk space (497082695680 B)
[2025-06-03 12:31:06] 2025-06-03 07:26:28,790 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 12:31:06] 2025-06-03 07:26:28,790 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 12:31:06] 2025-06-03 07:26:28,791 | INFO     | update_server=False
[2025-06-03 12:31:06] 2025-06-03 07:26:28,791 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 12:31:06] 2025-06-03 07:26:28,791 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 12:31:06] 2025-06-03 07:26:28,791 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 12:31:06] 2025-06-03 07:26:28,791 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 12:31:06] 2025-06-03 07:26:28,791 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 12:31:06] 2025-06-03 07:26:28,799 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:31:06] 2025-06-03 07:26:28,799 | INFO     | aborting loop
[2025-06-03 12:31:06] 2025-06-03 07:26:28,952 | INFO     | all data control threads have been joined
[2025-06-03 12:31:06] 2025-06-03 07:26:29,087 | INFO     | all payload control threads have been joined
[2025-06-03 12:31:06] 2025-06-03 07:26:29,153 | INFO     | all job control threads have been joined
[2025-06-03 12:31:06] 2025-06-03 07:26:29,796 | INFO     | [job] retrieve thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:29,805 | INFO     | [job] job monitor thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:29,923 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 12:31:06] 2025-06-03 07:26:29,958 | INFO     | [data] control thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,093 | INFO     | [payload] control thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,153 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,159 | INFO     | [job] control thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,213 | INFO     | [payload] failed_post thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,451 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,480 | INFO     | [job] validate thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,673 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,679 | INFO     | [data] copytool_in thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:30,797 | INFO     | [payload] validate_post thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:31,047 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:31,184 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 12:31:06] 2025-06-03 07:26:31,461 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 12:31:06] 2025-06-03 07:26:31,930 | INFO     | [data] copytool_out thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:32,190 | INFO     | [job] queue monitor thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:35,470 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 12:31:06] 2025-06-03 07:26:37,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139875825731392)>', '<ExcThread(monitor, started 139875365922560)>']
[2025-06-03 12:31:06] 2025-06-03 07:26:37,844 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 12:31:06] 2025-06-03 07:26:37,844 | INFO     | [monitor] control thread has ended
[2025-06-03 12:31:06] 2025-06-03 07:26:42,431 | INFO     | all workflow threads have been joined
[2025-06-03 12:31:06] 2025-06-03 07:26:42,431 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 12:31:06] 2025-06-03 07:26:42,432 | INFO     | traces error code: 0
[2025-06-03 12:31:06] 2025-06-03 07:26:42,432 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 12:31:06] 2025-06-03 07:26:42,707 [wrapper] ==== pilot stdout END ====
[2025-06-03 12:31:06] 2025-06-03 07:26:42,765 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 12:31:06] 2025-06-03 07:26:42,824 [wrapper] pilotpid: 25351
[2025-06-03 12:31:06] 2025-06-03 07:26:42,867 [wrapper] Pilot exit status: 0
[2025-06-03 12:31:06] 2025-06-03 07:26:43,259 [wrapper] pandaids: 6677385836
[2025-06-03 12:31:06] 2025-06-03 07:26:44,006 [wrapper] cleanup supervisor_pilot 12025 25352
[2025-06-03 12:31:06] 2025-06-03 07:26:44,113 [wrapper] Test setup, not cleaning
[2025-06-03 12:31:06] 2025-06-03 07:26:44,200 [wrapper] apfmon messages muted
[2025-06-03 12:31:06] 2025-06-03 07:26:44,278 [wrapper] ==== wrapper stdout END ====
[2025-06-03 12:31:06] 2025-06-03 07:26:44,352 [wrapper] ==== wrapper stderr END ====
[2025-06-03 12:31:06]  *** Error codes and diagnostics ***
[2025-06-03 12:31:06]     "exeErrorCode": 0,
[2025-06-03 12:31:06]     "exeErrorDiag": "",
[2025-06-03 12:31:06]     "pilotErrorCode": 0,
[2025-06-03 12:31:06]     "pilotErrorDiag": "",
[2025-06-03 12:31:06]  *** Listing of results directory ***
[2025-06-03 12:31:06] total 391332
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:59 queuedata.json
[2025-06-03 12:31:06] -rwx------. 1 boinc boinc     37140 Jun  2 19:00 runpilot2-wrapper.sh
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc       100 Jun  3 05:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 12:31:06] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 05:44 run_atlas
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc       105 Jun  3 05:44 job.xml
[2025-06-03 12:31:06] -rw-r--r--. 2 boinc boinc 214948695 Jun  3 05:44 EVNT.45006593._000186.pool.root.1
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc      6392 Jun  3 05:44 init_data.xml
[2025-06-03 12:31:06] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:44 start_atlas.sh
[2025-06-03 12:31:06] drwxrwx--x. 2 boinc boinc        68 Jun  3 05:44 shared
[2025-06-03 12:31:06] -rw-r--r--. 2 boinc boinc    508878 Jun  3 05:44 input.tar.gz
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc         0 Jun  3 05:44 boinc_lockfile
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc      2521 Jun  3 05:44 pandaJob.out
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc    988073 Jun  3 05:44 agis_schedconf.cvmfs.json
[2025-06-03 12:31:06] drwx------. 4 boinc boinc      4096 Jun  3 05:44 pilot3
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc 178873657 Jun  3 09:23 HITS.45006595._004643.pool.root.1
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc       531 Jun  3 09:23 boinc_task_state.xml
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc      1031 Jun  3 09:24 memory_monitor_summary.json
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc   1603667 Jun  3 09:25 agis_ddmendpoints.agis.ALL.json
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc    383009 Jun  3 09:25 log.45006595._004643.job.log.tgz.1
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc        95 Jun  3 09:26 pilot_heartbeat.json
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc      7682 Jun  3 09:26 heartbeat.json
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc      4540 Jun  3 09:26 pilotlog.txt
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc   1157026 Jun  3 09:26 log.45006595._004643.job.log.1
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc       357 Jun  3 09:26 output.list
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc       620 Jun  3 09:26 runtime_log
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc   1556480 Jun  3 09:26 result.tar.gz
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc       656 Jun  3 09:26 tZ3NDmzhNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmVbfKDmbWG4Um.diag
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc      8673 Jun  3 09:26 runtime_log.err
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc      8192 Jun  3 12:31 boinc_mmap_file
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc        28 Jun  3 12:31 wrapper_checkpoint.txt
[2025-06-03 12:31:06] -rw-r--r--. 1 boinc boinc     20484 Jun  3 12:31 stderr.txt
[2025-06-03 12:31:06] HITS file was successfully produced:
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc 178873657 Jun  3 09:23 shared/HITS.pool.root.1
[2025-06-03 12:31:06]  *** Contents of shared directory: ***
[2025-06-03 12:31:06] total 386632
[2025-06-03 12:31:06] -rw-r--r--. 2 boinc boinc 214948695 Jun  3 05:44 ATLAS.root_0
[2025-06-03 12:31:06] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:44 start_atlas.sh
[2025-06-03 12:31:06] -rw-r--r--. 2 boinc boinc    508878 Jun  3 05:44 input.tar.gz
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc 178873657 Jun  3 09:23 HITS.pool.root.1
[2025-06-03 12:31:06] -rw-------. 1 boinc boinc   1556480 Jun  3 09:26 result.tar.gz
12:31:08 (21656): run_atlas exited; CPU time 48801.479275
12:31:08 (21656): called boinc_finish(0)

</stderr_txt>
]]>

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