Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:24:03 (11205): wrapper (7.7.26015): starting
22:24:03 (11205): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 22:24:03] Arguments: --nthreads 8
[2025-06-02 22:24:03] Threads: 8
[2025-06-02 22:24:03] Checking for CVMFS
[2025-06-02 22:24:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 22:24:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 22:24:04] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 22:24:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 22:24:05] 2.11.2.0 24901 30792 92372 146718 3 16 23686932 25165824 4633 130560 0 15804896 99.791 17982561 2088 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 22:24:05] CVMFS is ok
[2025-06-02 22:24:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 22:24:05] Checking for apptainer binary...
[2025-06-02 22:24:05] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 22:24:05] Running /usr/bin/apptainer --version
[2025-06-02 22:24:05] apptainer version 1.3.2-1.el7
[2025-06-02 22:24:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 22:24:09] cg-vwn281.simple-grid.lan
[2025-06-02 22:24:09] apptainer works
[2025-06-02 22:24:09] Set ATHENA_PROC_NUMBER=8
[2025-06-02 22:24:09] Set ATHENA_CORE_NUMBER=8
[2025-06-02 22:24:09] Starting ATLAS job with PandaID=6677392454
[2025-06-02 22:24:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:30:08]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:30:08] 2025-06-03 00:15:43,357 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 02:30:08] 2025-06-03 00:15:43,357 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 02:30:08] 2025-06-03 00:15:43,357 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 02:30:08] 2025-06-03 00:15:43,357 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 02:30:08] 2025-06-03 00:15:43,367 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:30:08] 2025-06-03 00:15:43,368 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,369 | INFO     | sum of deviations: 5500605887.000021
[2025-06-03 02:30:08] 2025-06-03 00:15:43,370 | INFO     | mean x: 1748903079.0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,370 | INFO     | mean y: 2561652.418604651
[2025-06-03 02:30:08] 2025-06-03 00:15:43,370 | INFO     | -- intersect: -3119143370.953543
[2025-06-03 02:30:08] 2025-06-03 00:15:43,370 | INFO     | intersect: -3119143370.953543
[2025-06-03 02:30:08] 2025-06-03 00:15:43,370 | INFO     | chi2: 6.375244093237878
[2025-06-03 02:30:08] 2025-06-03 00:15:43,371 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 02:30:08] 2025-06-03 00:15:43,372 | INFO     | sum of deviations: 22385447367.000015
[2025-06-03 02:30:08] 2025-06-03 00:15:43,372 | INFO     | mean x: 1748902926.5
[2025-06-03 02:30:08] 2025-06-03 00:15:43,373 | INFO     | mean y: 2573718.2666666666
[2025-06-03 02:30:08] 2025-06-03 00:15:43,373 | INFO     | -- intersect: -13630852822.056189
[2025-06-03 02:30:08] 2025-06-03 00:15:43,373 | INFO     | intersect: -13630852822.056189
[2025-06-03 02:30:08] 2025-06-03 00:15:43,373 | INFO     | chi2: 5.650635843981298
[2025-06-03 02:30:08] 2025-06-03 00:15:43,373 | INFO     | current chi2=5.650635843981298 (change=11.365968716792526 %)
[2025-06-03 02:30:08] 2025-06-03 00:15:43,373 | INFO     | right removable region: 209
[2025-06-03 02:30:08] 2025-06-03 00:15:43,374 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 02:30:08] 2025-06-03 00:15:43,375 | INFO     | sum of deviations: -70136089285.5
[2025-06-03 02:30:08] 2025-06-03 00:15:43,376 | INFO     | mean x: 1748903231.5
[2025-06-03 02:30:08] 2025-06-03 00:15:43,376 | INFO     | mean y: 2616489.033333333
[2025-06-03 02:30:08] 2025-06-03 00:15:43,376 | INFO     | -- intersect: 42717661320.55594
[2025-06-03 02:30:08] 2025-06-03 00:15:43,376 | INFO     | intersect: 42717661320.55594
[2025-06-03 02:30:08] 2025-06-03 00:15:43,376 | INFO     | chi2: 1.784207024445699
[2025-06-03 02:30:08] 2025-06-03 00:15:43,376 | INFO     | current chi2=1.784207024445699 (change=72.01351041071227 %)
[2025-06-03 02:30:08] 2025-06-03 00:15:43,377 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,384 | INFO     | sum of deviations: -95392369130.00002
[2025-06-03 02:30:08] 2025-06-03 00:15:43,385 | INFO     | mean x: 1748903384.0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,385 | INFO     | mean y: 2635560.717073171
[2025-06-03 02:30:08] 2025-06-03 00:15:43,385 | INFO     | -- intersect: 62455128673.52959
[2025-06-03 02:30:08] 2025-06-03 00:15:43,385 | INFO     | intersect: 62455128673.52959
[2025-06-03 02:30:08] 2025-06-03 00:15:43,385 | INFO     | chi2: 0.9956568143848749
[2025-06-03 02:30:08] 2025-06-03 00:15:43,386 | INFO     | current chi2=0.9956568143848749 (change=44.196116216155104 %)
[2025-06-03 02:30:08] 2025-06-03 00:15:43,386 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,387 | INFO     | sum of deviations: -95276255812.99997
[2025-06-03 02:30:08] 2025-06-03 00:15:43,388 | INFO     | mean x: 1748903536.5
[2025-06-03 02:30:08] 2025-06-03 00:15:43,388 | INFO     | mean y: 2635437.69
[2025-06-03 02:30:08] 2025-06-03 00:15:43,388 | INFO     | -- intersect: 67175363157.85868
[2025-06-03 02:30:08] 2025-06-03 00:15:43,388 | INFO     | intersect: 67175363157.85868
[2025-06-03 02:30:08] 2025-06-03 00:15:43,388 | INFO     | chi2: 0.9607852881653016
[2025-06-03 02:30:08] 2025-06-03 00:15:43,388 | INFO     | current chi2=0.9607852881653016 (change=3.5023640390707467 %)
[2025-06-03 02:30:08] 2025-06-03 00:15:43,388 | INFO     | left removable region: 30
[2025-06-03 02:30:08] 2025-06-03 00:15:43,389 | INFO     | sum of square deviations: 1778377530.0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,390 | INFO     | sum of deviations: -68347311102.99999
[2025-06-03 02:30:08] 2025-06-03 00:15:43,390 | INFO     | mean x: 1748903811.0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,390 | INFO     | mean y: 2643491.4804469272
[2025-06-03 02:30:08] 2025-06-03 00:15:43,390 | INFO     | -- intersect: 67217208927.22305
[2025-06-03 02:30:08] 2025-06-03 00:15:43,390 | INFO     | intersect: 67217208927.22305
[2025-06-03 02:30:08] 2025-06-03 00:15:43,391 | INFO     | chi2: 0.14613544090584157
[2025-06-03 02:30:08] 2025-06-03 00:15:43,391 | INFO     | -- intersect: 67217208927.22305
[2025-06-03 02:30:08] 2025-06-03 00:15:43,391 | INFO     | current memory leak: -38.43 B/s (using 179 data points, chi2=0.15)
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | ..............................
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | . Timing measurements:
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | . get job = 0 s
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | . initial setup = 10 s
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | . payload setup = 167 s
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | . stage-in = 0 s
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | . payload execution = 13247 s
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | . stage-out = 3 s
[2025-06-03 02:30:08] 2025-06-03 00:15:43,392 | INFO     | . log creation = 1 s
[2025-06-03 02:30:08] 2025-06-03 00:15:43,393 | INFO     | ..............................
[2025-06-03 02:30:08] 2025-06-03 00:15:43,550 | INFO     | 
[2025-06-03 02:30:08] 2025-06-03 00:15:43,550 | INFO     | job summary report
[2025-06-03 02:30:08] 2025-06-03 00:15:43,550 | INFO     | --------------------------------------------------
[2025-06-03 02:30:08] 2025-06-03 00:15:43,550 | INFO     | PanDA job id: 6677392454
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | task id: 45006595
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | errors: (none)
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | pilot state: finished 
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | transexitcode: 0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | exeerrorcode: 0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | exeerrordiag: 
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | exitcode: 0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | exitmsg: OK
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | cpuconsumptiontime: 49571 s
[2025-06-03 02:30:08] 2025-06-03 00:15:43,551 | INFO     | nevents: 400
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | neventsw: 0
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | pid: 26486
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | pgrp: 26486
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | corecount: 8
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | event service: False
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 13: 2405233, 23: 2405289, 34: 2405317, 45: 2405473, 56: 2405501, 66: 2405529, 77: 2405557, 88: 2405613, 92: 2406127, 99
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | --------------------------------------------------
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | 
[2025-06-03 02:30:08] 2025-06-03 00:15:43,552 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-06-03 02:30:08] 2025-06-03 00:15:44,120 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,120 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,122 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:30:08] 2025-06-03 00:15:44,122 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,122 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:30:08] 2025-06-03 00:15:44,122 | INFO     | job 6677392454 has completed (purged errors)
[2025-06-03 02:30:08] 2025-06-03 00:15:44,122 | INFO     | overall cleanup function is called
[2025-06-03 02:30:08] 2025-06-03 00:15:45,132 | INFO     | --- collectZombieJob: --- 10, [26486]
[2025-06-03 02:30:08] 2025-06-03 00:15:45,132 | INFO     | zombie collector waiting for pid 26486
[2025-06-03 02:30:08] 2025-06-03 00:15:45,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:30:08] 2025-06-03 00:15:45,132 | INFO     | collected zombie processes
[2025-06-03 02:30:08] 2025-06-03 00:15:45,133 | INFO     | will attempt to kill all subprocesses of pid=26486
[2025-06-03 02:30:08] 2025-06-03 00:15:45,255 | INFO     | process IDs to be killed: [26486] (in reverse order)
[2025-06-03 02:30:08] 2025-06-03 00:15:46,165 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:30:08] 2025-06-03 00:15:46,166 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:30:08] 2025-06-03 00:15:46,169 | INFO     | did not find any defunct processes belonging to 26486
[2025-06-03 02:30:08] 2025-06-03 00:15:46,172 | INFO     | did not find any defunct processes belonging to 26486
[2025-06-03 02:30:08] 2025-06-03 00:15:46,172 | INFO     | ready for new job
[2025-06-03 02:30:08] 2025-06-03 00:15:46,172 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:30:08] 2025-06-03 00:15:46,174 | INFO     | **************************************
[2025-06-03 02:30:08] 2025-06-03 00:15:46,174 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:30:08] 2025-06-03 00:15:46,174 | INFO     | **************************************
[2025-06-03 02:30:08] 2025-06-03 00:15:46,175 | INFO     | 
[2025-06-03 02:30:08] 2025-06-03 00:15:46,175 | INFO     | pilot is running in a VM
[2025-06-03 02:30:08] 2025-06-03 00:15:46,175 | INFO     | architecture information:
[2025-06-03 02:30:08] 2025-06-03 00:15:46,195 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:30:08] 2025-06-03 00:15:46,410 | INFO     | cat /etc/os-release:
[2025-06-03 02:30:08] NAME="CentOS Linux"
[2025-06-03 02:30:08] VERSION="7 (Core)"
[2025-06-03 02:30:08] ID="centos"
[2025-06-03 02:30:08] ID_LIKE="rhel fedora"
[2025-06-03 02:30:08] VERSION_ID="7"
[2025-06-03 02:30:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:30:08] ANSI_COLOR="0;31"
[2025-06-03 02:30:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:30:08] HOME_URL="https://www.centos.org/"
[2025-06-03 02:30:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:30:08] 
[2025-06-03 02:30:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:30:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:30:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:30:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:30:08] 
[2025-06-03 02:30:08] 2025-06-03 00:15:46,411 | INFO     | **************************************
[2025-06-03 02:30:08] 2025-06-03 00:15:46,914 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-06-03 02:30:08] 2025-06-03 00:15:47,137 | INFO     | sufficient remaining disk space (497008246784 B)
[2025-06-03 02:30:08] 2025-06-03 00:15:47,137 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:30:08] 2025-06-03 00:15:47,137 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:30:08] 2025-06-03 00:15:47,137 | INFO     | update_server=False
[2025-06-03 02:30:08] 2025-06-03 00:15:47,137 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:30:08] 2025-06-03 00:15:47,155 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 02:30:08] 2025-06-03 00:15:47,155 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 02:30:08] 2025-06-03 00:15:47,156 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:30:08] 2025-06-03 00:15:47,156 | INFO     | will abort loop
[2025-06-03 02:30:08] 2025-06-03 00:15:47,385 | INFO     | all data control threads have been joined
[2025-06-03 02:30:08] 2025-06-03 00:15:47,423 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:30:08] 2025-06-03 00:15:47,831 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:30:08] 2025-06-03 00:15:47,831 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:30:08] 2025-06-03 00:15:47,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:30:08] 2025-06-03 00:15:47,858 | INFO     | all payload control threads have been joined
[2025-06-03 02:30:08] 2025-06-03 00:15:48,018 | INFO     | all job control threads have been joined
[2025-06-03 02:30:08] 2025-06-03 00:15:48,143 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:48,162 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:48,243 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:48,297 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:48,391 | INFO     | [data] control thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:48,409 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:48,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:30:08] 2025-06-03 00:15:48,863 | INFO     | [payload] control thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:48,926 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:48,940 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:49,024 | INFO     | [job] control thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:49,192 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:49,254 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:49,430 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:49,437 | INFO     | [job] validate thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:49,570 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:50,597 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:30:08] 2025-06-03 00:15:54,606 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:30:08] 2025-06-03 00:15:55,945 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139695221937984)>', '<ExcThread(monitor, started 139694775969536)>']
[2025-06-03 02:30:08] 2025-06-03 00:15:56,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:30:08] 2025-06-03 00:15:56,886 | INFO     | [monitor] control thread has ended
[2025-06-03 02:30:08] 2025-06-03 00:16:00,971 | INFO     | all workflow threads have been joined
[2025-06-03 02:30:08] 2025-06-03 00:16:00,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:30:08] 2025-06-03 00:16:00,972 | INFO     | traces error code: 0
[2025-06-03 02:30:08] 2025-06-03 00:16:00,972 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:30:08] 2025-06-03 00:16:01,305 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:30:08] 2025-06-03 00:16:01,350 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:30:08] 2025-06-03 00:16:01,394 [wrapper] pilotpid: 17773
[2025-06-03 02:30:08] 2025-06-03 00:16:01,437 [wrapper] Pilot exit status: 0
[2025-06-03 02:30:08] 2025-06-03 00:16:01,865 [wrapper] pandaids: 6677392454
[2025-06-03 02:30:08] 2025-06-03 00:16:02,485 [wrapper] cleanup supervisor_pilot  4138 17774
[2025-06-03 02:30:08] 2025-06-03 00:16:02,555 [wrapper] Test setup, not cleaning
[2025-06-03 02:30:08] 2025-06-03 00:16:02,600 [wrapper] apfmon messages muted
[2025-06-03 02:30:08] 2025-06-03 00:16:02,659 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:30:08] 2025-06-03 00:16:02,717 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:30:08]  *** Error codes and diagnostics ***
[2025-06-03 02:30:08]     "exeErrorCode": 0,
[2025-06-03 02:30:08]     "exeErrorDiag": "",
[2025-06-03 02:30:08]     "pilotErrorCode": 0,
[2025-06-03 02:30:08]     "pilotErrorDiag": "",
[2025-06-03 02:30:08]  *** Listing of results directory ***
[2025-06-03 02:30:08] total 389056
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc    495897 Jun  2 20:30 pilot3.tar.gz
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:42 queuedata.json
[2025-06-03 02:30:08] -rwx------. 1 boinc boinc     37140 Jun  2 20:42 runpilot2-wrapper.sh
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc       100 Jun  2 22:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:30:08] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 22:24 run_atlas
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc       105 Jun  2 22:24 job.xml
[2025-06-03 02:30:08] -rw-r--r--. 2 boinc boinc 215020603 Jun  2 22:24 EVNT.45006593._000316.pool.root.1
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc      6390 Jun  2 22:24 init_data.xml
[2025-06-03 02:30:08] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:24 start_atlas.sh
[2025-06-03 02:30:08] drwxrwx--x. 2 boinc boinc        68 Jun  2 22:24 shared
[2025-06-03 02:30:08] -rw-r--r--. 2 boinc boinc    508876 Jun  2 22:24 input.tar.gz
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc         0 Jun  2 22:24 boinc_lockfile
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc      2521 Jun  2 22:24 pandaJob.out
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc    987975 Jun  2 22:27 agis_schedconf.cvmfs.json
[2025-06-03 02:30:08] drwx------. 4 boinc boinc      4096 Jun  2 22:27 pilot3
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc 176410690 Jun  3 02:12 HITS.45006595._007902.pool.root.1
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc       531 Jun  3 02:13 boinc_task_state.xml
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc      1016 Jun  3 02:14 memory_monitor_summary.json
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc   1603667 Jun  3 02:14 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc    397015 Jun  3 02:14 log.45006595._007902.job.log.tgz.1
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc      7693 Jun  3 02:15 heartbeat.json
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc        95 Jun  3 02:15 pilot_heartbeat.json
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc      4602 Jun  3 02:16 pilotlog.txt
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc   1171423 Jun  3 02:16 log.45006595._007902.job.log.1
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc       357 Jun  3 02:16 output.list
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc       620 Jun  3 02:16 runtime_log
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc   1587200 Jun  3 02:16 result.tar.gz
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc      8659 Jun  3 02:16 runtime_log.err
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc       656 Jun  3 02:16 5TNKDmPIPg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmf3fKDmr3Cf0m.diag
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc      8192 Jun  3 02:30 boinc_mmap_file
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc        28 Jun  3 02:30 wrapper_checkpoint.txt
[2025-06-03 02:30:08] -rw-r--r--. 1 boinc boinc     20492 Jun  3 02:30 stderr.txt
[2025-06-03 02:30:08] HITS file was successfully produced:
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc 176410690 Jun  3 02:12 shared/HITS.pool.root.1
[2025-06-03 02:30:08]  *** Contents of shared directory: ***
[2025-06-03 02:30:08] total 384332
[2025-06-03 02:30:08] -rw-r--r--. 2 boinc boinc 215020603 Jun  2 22:24 ATLAS.root_0
[2025-06-03 02:30:08] -rw-r--r--. 2 boinc boinc     15093 Jun  2 22:24 start_atlas.sh
[2025-06-03 02:30:08] -rw-r--r--. 2 boinc boinc    508876 Jun  2 22:24 input.tar.gz
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc 176410690 Jun  3 02:12 HITS.pool.root.1
[2025-06-03 02:30:08] -rw-------. 1 boinc boinc   1587200 Jun  3 02:16 result.tar.gz
02:30:10 (11205): run_atlas exited; CPU time 49764.031993
02:30:10 (11205): called boinc_finish(0)

</stderr_txt>
]]>

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