Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:16:48 (8616): wrapper (7.7.26015): starting
04:16:48 (8616): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:16:48] Arguments: --nthreads 8
[2025-06-03 04:16:48] Threads: 8
[2025-06-03 04:16:48] Checking for CVMFS
[2025-06-03 04:16:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:16:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:16:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:16:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:16:50] 2.11.2.0 19466 31156 90596 146724 2 14 22986562 25165824 4636 130560 0 15890690 99.847 16831591 1960 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 04:16:50] CVMFS is ok
[2025-06-03 04:16:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:16:50] Checking for apptainer binary...
[2025-06-03 04:16:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:16:50] Running /usr/bin/apptainer --version
[2025-06-03 04:16:50] apptainer version 1.3.2-1.el7
[2025-06-03 04:16:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:47:26] cg-vwn426.simple-grid.lan
[2025-06-03 04:47:26] apptainer works
[2025-06-03 04:47:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:47:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:47:26] Starting ATLAS job with PandaID=6677387635
[2025-06-03 04:47:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:53:50]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:53:50] 2025-06-03 06:36:48,424 | INFO     | extracted standard info from prmon json
[2025-06-03 08:53:50] 2025-06-03 06:36:48,424 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:53:50] 2025-06-03 06:36:48,424 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:53:50] 2025-06-03 06:36:48,425 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:53:50] 2025-06-03 06:36:48,425 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:53:50] 2025-06-03 06:36:48,430 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:53:50] 2025-06-03 06:36:48,430 | INFO     | sum of square deviations: 2996454322.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,432 | INFO     | sum of deviations: 47186422143.99997
[2025-06-03 08:53:50] 2025-06-03 06:36:48,432 | INFO     | mean x: 1748926039.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,433 | INFO     | mean y: 2441238.192488263
[2025-06-03 08:53:50] 2025-06-03 06:36:48,433 | INFO     | -- intersect: -27538630143.735207
[2025-06-03 08:53:50] 2025-06-03 06:36:48,433 | INFO     | intersect: -27538630143.735207
[2025-06-03 08:53:50] 2025-06-03 06:36:48,433 | INFO     | chi2: 10.285376179565048
[2025-06-03 08:53:50] 2025-06-03 06:36:48,434 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,435 | INFO     | sum of deviations: 75190930169.49994
[2025-06-03 08:53:50] 2025-06-03 06:36:48,435 | INFO     | mean x: 1748925886.5
[2025-06-03 08:53:50] 2025-06-03 06:36:48,436 | INFO     | mean y: 2461659.466346154
[2025-06-03 08:53:50] 2025-06-03 06:36:48,436 | INFO     | -- intersect: -47125480082.05262
[2025-06-03 08:53:50] 2025-06-03 06:36:48,436 | INFO     | intersect: -47125480082.05262
[2025-06-03 08:53:50] 2025-06-03 06:36:48,436 | INFO     | chi2: 8.83555608134138
[2025-06-03 08:53:50] 2025-06-03 06:36:48,436 | INFO     | current chi2=8.83555608134138 (change=14.095936530782083 %)
[2025-06-03 08:53:50] 2025-06-03 06:36:48,436 | INFO     | right removable region: 207
[2025-06-03 08:53:50] 2025-06-03 06:36:48,437 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,438 | INFO     | sum of deviations: -29382926641.999996
[2025-06-03 08:53:50] 2025-06-03 06:36:48,439 | INFO     | mean x: 1748926191.5
[2025-06-03 08:53:50] 2025-06-03 06:36:48,439 | INFO     | mean y: 2497869.1923076925
[2025-06-03 08:53:50] 2025-06-03 06:36:48,439 | INFO     | -- intersect: 18419042169.80753
[2025-06-03 08:53:50] 2025-06-03 06:36:48,439 | INFO     | intersect: 18419042169.80753
[2025-06-03 08:53:50] 2025-06-03 06:36:48,439 | INFO     | chi2: 4.779379079979569
[2025-06-03 08:53:50] 2025-06-03 06:36:48,439 | INFO     | current chi2=4.779379079979569 (change=53.53228703997017 %)
[2025-06-03 08:53:50] 2025-06-03 06:36:48,440 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,441 | INFO     | sum of deviations: -85062100016.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,441 | INFO     | mean x: 1748926344.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,442 | INFO     | mean y: 2541006.7586206896
[2025-06-03 08:53:50] 2025-06-03 06:36:48,442 | INFO     | -- intersect: 57354944287.72171
[2025-06-03 08:53:50] 2025-06-03 06:36:48,442 | INFO     | intersect: 57354944287.72171
[2025-06-03 08:53:50] 2025-06-03 06:36:48,442 | INFO     | chi2: 2.0202173007117823
[2025-06-03 08:53:50] 2025-06-03 06:36:48,442 | INFO     | current chi2=2.0202173007117823 (change=57.73054894987701 %)
[2025-06-03 08:53:50] 2025-06-03 06:36:48,443 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 08:53:50] 2025-06-03 06:36:48,444 | INFO     | sum of deviations: -91993342502.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,444 | INFO     | mean x: 1748926496.5
[2025-06-03 08:53:50] 2025-06-03 06:36:48,450 | INFO     | mean y: 2546577.232323232
[2025-06-03 08:53:50] 2025-06-03 06:36:48,450 | INFO     | -- intersect: 66846948133.74551
[2025-06-03 08:53:50] 2025-06-03 06:36:48,450 | INFO     | intersect: 66846948133.74551
[2025-06-03 08:53:50] 2025-06-03 06:36:48,450 | INFO     | chi2: 1.8801329310187314
[2025-06-03 08:53:50] 2025-06-03 06:36:48,451 | INFO     | current chi2=1.8801329310187314 (change=6.934123851117158 %)
[2025-06-03 08:53:50] 2025-06-03 06:36:48,451 | INFO     | left removable region: 30
[2025-06-03 08:53:50] 2025-06-03 06:36:48,451 | INFO     | sum of square deviations: 1719429448.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,452 | INFO     | sum of deviations: -47086041459.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,452 | INFO     | mean x: 1748926771.0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,453 | INFO     | mean y: 2556946.5423728814
[2025-06-03 08:53:50] 2025-06-03 06:36:48,453 | INFO     | -- intersect: 47896373435.40653
[2025-06-03 08:53:50] 2025-06-03 06:36:48,453 | INFO     | intersect: 47896373435.40653
[2025-06-03 08:53:50] 2025-06-03 06:36:48,453 | INFO     | chi2: 0.18535135844053935
[2025-06-03 08:53:50] 2025-06-03 06:36:48,453 | INFO     | -- intersect: 47896373435.40653
[2025-06-03 08:53:50] 2025-06-03 06:36:48,453 | INFO     | current memory leak: -27.38 B/s (using 177 data points, chi2=0.19)
[2025-06-03 08:53:50] 2025-06-03 06:36:48,454 | INFO     | ..............................
[2025-06-03 08:53:50] 2025-06-03 06:36:48,454 | INFO     | . Timing measurements:
[2025-06-03 08:53:50] 2025-06-03 06:36:48,454 | INFO     | . get job = 0 s
[2025-06-03 08:53:50] 2025-06-03 06:36:48,454 | INFO     | . initial setup = 11 s
[2025-06-03 08:53:50] 2025-06-03 06:36:48,454 | INFO     | . payload setup = 162 s
[2025-06-03 08:53:50] 2025-06-03 06:36:48,455 | INFO     | . stage-in = 0 s
[2025-06-03 08:53:50] 2025-06-03 06:36:48,455 | INFO     | . payload execution = 13087 s
[2025-06-03 08:53:50] 2025-06-03 06:36:48,455 | INFO     | . stage-out = 4 s
[2025-06-03 08:53:50] 2025-06-03 06:36:48,455 | INFO     | . log creation = 1 s
[2025-06-03 08:53:50] 2025-06-03 06:36:48,455 | INFO     | ..............................
[2025-06-03 08:53:50] 2025-06-03 06:36:48,596 | INFO     | 
[2025-06-03 08:53:50] 2025-06-03 06:36:48,596 | INFO     | job summary report
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | --------------------------------------------------
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | PanDA job id: 6677387635
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | task id: 45006595
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | errors: (none)
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | pilot state: finished 
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | transexitcode: 0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | exeerrorcode: 0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | exeerrordiag: 
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | exitcode: 0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,597 | INFO     | exitmsg: OK
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | cpuconsumptiontime: 47710 s
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | nevents: 400
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | neventsw: 0
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | pid: 13762
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | pgrp: 13762
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | corecount: 8
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | event service: False
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | sizes: {0: 2404349, 1: 2405034, 2: 2405233, 13: 2405233, 23: 2405289, 34: 2405317, 45: 2405473, 56: 2405501, 66: 2405529, 77: 2405557, 88: 2405613, 98: 2405921, 10
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | --------------------------------------------------
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | 
[2025-06-03 08:53:50] 2025-06-03 06:36:48,598 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-06-03 08:53:50] 2025-06-03 06:36:48,825 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,825 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,827 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,827 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,827 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,827 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,827 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,827 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:53:50] 2025-06-03 06:36:48,827 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,827 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:53:50] 2025-06-03 06:36:48,828 | INFO     | job 6677387635 has completed (purged errors)
[2025-06-03 08:53:50] 2025-06-03 06:36:48,828 | INFO     | overall cleanup function is called
[2025-06-03 08:53:50] 2025-06-03 06:36:49,836 | INFO     | --- collectZombieJob: --- 10, [13762]
[2025-06-03 08:53:50] 2025-06-03 06:36:49,837 | INFO     | zombie collector waiting for pid 13762
[2025-06-03 08:53:50] 2025-06-03 06:36:49,837 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:53:50] 2025-06-03 06:36:49,837 | INFO     | collected zombie processes
[2025-06-03 08:53:50] 2025-06-03 06:36:49,837 | INFO     | will attempt to kill all subprocesses of pid=13762
[2025-06-03 08:53:50] 2025-06-03 06:36:49,963 | INFO     | process IDs to be killed: [13762] (in reverse order)
[2025-06-03 08:53:50] 2025-06-03 06:36:50,942 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:53:50] 2025-06-03 06:36:50,943 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:53:50] 2025-06-03 06:36:50,946 | INFO     | did not find any defunct processes belonging to 13762
[2025-06-03 08:53:50] 2025-06-03 06:36:50,950 | INFO     | did not find any defunct processes belonging to 13762
[2025-06-03 08:53:50] 2025-06-03 06:36:50,950 | INFO     | ready for new job
[2025-06-03 08:53:50] 2025-06-03 06:36:50,950 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:53:50] 2025-06-03 06:36:50,953 | INFO     | **************************************
[2025-06-03 08:53:50] 2025-06-03 06:36:50,953 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:53:50] 2025-06-03 06:36:50,953 | INFO     | **************************************
[2025-06-03 08:53:50] 2025-06-03 06:36:50,953 | INFO     | 
[2025-06-03 08:53:50] 2025-06-03 06:36:50,954 | INFO     | pilot is running in a VM
[2025-06-03 08:53:50] 2025-06-03 06:36:50,954 | INFO     | architecture information:
[2025-06-03 08:53:50] 2025-06-03 06:36:50,970 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:53:50] 2025-06-03 06:36:51,128 | INFO     | cat /etc/os-release:
[2025-06-03 08:53:50] NAME="CentOS Linux"
[2025-06-03 08:53:50] VERSION="7 (Core)"
[2025-06-03 08:53:50] ID="centos"
[2025-06-03 08:53:50] ID_LIKE="rhel fedora"
[2025-06-03 08:53:50] VERSION_ID="7"
[2025-06-03 08:53:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:53:50] ANSI_COLOR="0;31"
[2025-06-03 08:53:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:53:50] HOME_URL="https://www.centos.org/"
[2025-06-03 08:53:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:53:50] 
[2025-06-03 08:53:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:53:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:53:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:53:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:53:50] 
[2025-06-03 08:53:50] 2025-06-03 06:36:51,129 | INFO     | **************************************
[2025-06-03 08:53:50] 2025-06-03 06:36:51,632 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-06-03 08:53:50] 2025-06-03 06:36:51,949 | INFO     | sufficient remaining disk space (496632856576 B)
[2025-06-03 08:53:50] 2025-06-03 06:36:51,950 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:53:50] 2025-06-03 06:36:51,950 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:53:50] 2025-06-03 06:36:51,950 | INFO     | update_server=False
[2025-06-03 08:53:50] 2025-06-03 06:36:51,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:53:50] 2025-06-03 06:36:51,951 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:53:50] 2025-06-03 06:36:51,951 | INFO     | aborting loop
[2025-06-03 08:53:50] 2025-06-03 06:36:51,960 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:53:50] 2025-06-03 06:36:51,960 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:53:50] 2025-06-03 06:36:51,960 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:53:50] 2025-06-03 06:36:51,960 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:53:50] 2025-06-03 06:36:52,956 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:52,957 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:52,960 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:53:50] 2025-06-03 06:36:53,004 | INFO     | all data control threads have been joined
[2025-06-03 08:53:50] 2025-06-03 06:36:53,056 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:53,129 | INFO     | all job control threads have been joined
[2025-06-03 08:53:50] 2025-06-03 06:36:53,183 | INFO     | [job] validate thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:53,331 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:53,386 | INFO     | all payload control threads have been joined
[2025-06-03 08:53:50] 2025-06-03 06:36:53,467 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:53,615 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:53:50] 2025-06-03 06:36:54,010 | INFO     | [data] control thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:54,048 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:53:50] 2025-06-03 06:36:54,124 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:54,135 | INFO     | [job] control thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:54,185 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:54,333 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:54,364 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:54,393 | INFO     | [payload] control thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:54,621 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:54,967 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:58,057 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:53:50] 2025-06-03 06:36:59,555 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413665527616)>', '<ExcThread(monitor, started 140413000210176)>']
[2025-06-03 08:53:50] 2025-06-03 06:37:00,007 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:53:50] 2025-06-03 06:37:00,008 | INFO     | [monitor] control thread has ended
[2025-06-03 08:53:50] 2025-06-03 06:37:04,581 | INFO     | all workflow threads have been joined
[2025-06-03 08:53:50] 2025-06-03 06:37:04,581 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:53:50] 2025-06-03 06:37:04,581 | INFO     | traces error code: 0
[2025-06-03 08:53:50] 2025-06-03 06:37:04,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:53:50] 2025-06-03 06:37:04,833 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:53:50] 2025-06-03 06:37:04,838 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:53:50] 2025-06-03 06:37:04,885 [wrapper] pilotpid: 1178
[2025-06-03 08:53:50] 2025-06-03 06:37:05,000 [wrapper] Pilot exit status: 0
[2025-06-03 08:53:50] 2025-06-03 06:37:05,421 [wrapper] pandaids: 6677387635
[2025-06-03 08:53:50] 2025-06-03 06:37:06,300 [wrapper] cleanup supervisor_pilot 23813 1179
[2025-06-03 08:53:50] 2025-06-03 06:37:06,348 [wrapper] Test setup, not cleaning
[2025-06-03 08:53:50] 2025-06-03 06:37:06,424 [wrapper] apfmon messages muted
[2025-06-03 08:53:50] 2025-06-03 06:37:06,479 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:53:50] 2025-06-03 06:37:06,563 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:53:50]  *** Error codes and diagnostics ***
[2025-06-03 08:53:50]     "exeErrorCode": 0,
[2025-06-03 08:53:50]     "exeErrorDiag": "",
[2025-06-03 08:53:50]     "pilotErrorCode": 0,
[2025-06-03 08:53:50]     "pilotErrorDiag": "",
[2025-06-03 08:53:50]  *** Listing of results directory ***
[2025-06-03 08:53:50] total 390820
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:27 queuedata.json
[2025-06-03 08:53:50] -rwx------. 1 boinc boinc     37140 Jun  2 19:27 runpilot2-wrapper.sh
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc       100 Jun  3 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:53:50] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 04:16 run_atlas
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc       105 Jun  3 04:16 job.xml
[2025-06-03 08:53:50] -rw-r--r--. 2 boinc boinc 218440193 Jun  3 04:16 EVNT.45006593._000224.pool.root.1
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc      6391 Jun  3 04:16 init_data.xml
[2025-06-03 08:53:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:16 start_atlas.sh
[2025-06-03 08:53:50] drwxrwx--x. 2 boinc boinc        68 Jun  3 04:16 shared
[2025-06-03 08:53:50] -rw-r--r--. 2 boinc boinc    508879 Jun  3 04:16 input.tar.gz
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc         0 Jun  3 04:16 boinc_lockfile
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc      2521 Jun  3 04:47 pandaJob.out
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc    988073 Jun  3 04:50 agis_schedconf.cvmfs.json
[2025-06-03 08:53:50] drwx------. 4 boinc boinc      4096 Jun  3 04:51 pilot3
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc 174861420 Jun  3 08:33 HITS.45006595._005596.pool.root.1
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc       531 Jun  3 08:33 boinc_task_state.xml
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc      1015 Jun  3 08:35 memory_monitor_summary.json
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc   1603667 Jun  3 08:35 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc    384317 Jun  3 08:35 log.45006595._005596.job.log.tgz.1
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc        95 Jun  3 08:36 pilot_heartbeat.json
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc      7696 Jun  3 08:36 heartbeat.json
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc      4539 Jun  3 08:37 pilotlog.txt
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc   1153805 Jun  3 08:37 log.45006595._005596.job.log.1
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc       357 Jun  3 08:37 output.list
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc       620 Jun  3 08:37 runtime_log
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc   1556480 Jun  3 08:37 result.tar.gz
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc      8659 Jun  3 08:37 runtime_log.err
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc       656 Jun  3 08:37 1kcMDmA8Ng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6jfKDmnxZcYo.diag
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:53 boinc_mmap_file
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:53 wrapper_checkpoint.txt
[2025-06-03 08:53:50] -rw-r--r--. 1 boinc boinc     20499 Jun  3 08:53 stderr.txt
[2025-06-03 08:53:50] HITS file was successfully produced:
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc 174861420 Jun  3 08:33 shared/HITS.pool.root.1
[2025-06-03 08:53:50]  *** Contents of shared directory: ***
[2025-06-03 08:53:50] total 386124
[2025-06-03 08:53:50] -rw-r--r--. 2 boinc boinc 218440193 Jun  3 04:16 ATLAS.root_0
[2025-06-03 08:53:50] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:16 start_atlas.sh
[2025-06-03 08:53:50] -rw-r--r--. 2 boinc boinc    508879 Jun  3 04:16 input.tar.gz
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc 174861420 Jun  3 08:33 HITS.pool.root.1
[2025-06-03 08:53:50] -rw-------. 1 boinc boinc   1556480 Jun  3 08:37 result.tar.gz
08:53:51 (8616): run_atlas exited; CPU time 47901.434808
08:53:51 (8616): called boinc_finish(0)

</stderr_txt>
]]>

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