Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:16:22 (24341): wrapper (7.7.26015): starting
07:16:22 (24341): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 07:16:22] Arguments: --nthreads 8
[2025-06-03 07:16:22] Threads: 8
[2025-06-03 07:16:22] Checking for CVMFS
[2025-06-03 07:16:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 07:16:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 07:16:25] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 07:16:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 07:16:26] 2.11.2.0 7179 31455 89904 146729 2 154 24567303 25165824 4357 130560 0 17043885 99.863 17000664 2405 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 07:16:26] CVMFS is ok
[2025-06-03 07:16:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 07:16:26] Checking for apptainer binary...
[2025-06-03 07:16:26] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 07:16:26] Running /usr/bin/apptainer --version
[2025-06-03 07:16:26] apptainer version 1.3.2-1.el7
[2025-06-03 07:16:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 07:16:28] cg-vwn286.simple-grid.lan
[2025-06-03 07:16:28] apptainer works
[2025-06-03 07:16:28] Set ATHENA_PROC_NUMBER=8
[2025-06-03 07:16:28] Set ATHENA_CORE_NUMBER=8
[2025-06-03 07:16:28] Starting ATLAS job with PandaID=6677387370
[2025-06-03 07:16:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 11:33:11]  *** The last 200 lines of the pilot log: ***
[2025-06-03 11:33:11] 2025-06-03 08:58:20,938 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 11:33:11] 2025-06-03 08:58:20,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 11:33:11] 2025-06-03 08:58:20,939 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 11:33:11] 2025-06-03 08:58:20,939 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 11:33:11] 2025-06-03 08:58:20,944 | INFO     | fitting pss+swap vs Time
[2025-06-03 11:33:11] 2025-06-03 08:58:20,945 | INFO     | sum of square deviations: 3081652046.9953523
[2025-06-03 11:33:11] 2025-06-03 08:58:20,947 | INFO     | sum of deviations: -39813921930.02792
[2025-06-03 11:33:11] 2025-06-03 08:58:20,947 | INFO     | mean x: 1748934463.004651
[2025-06-03 11:33:11] 2025-06-03 08:58:20,947 | INFO     | mean y: 2525784.0279069766
[2025-06-03 11:33:11] 2025-06-03 08:58:20,947 | INFO     | -- intersect: 22598178735.403282
[2025-06-03 11:33:11] 2025-06-03 08:58:20,947 | INFO     | intersect: 22598178735.403282
[2025-06-03 11:33:11] 2025-06-03 08:58:20,947 | INFO     | chi2: 2.8206044297788204
[2025-06-03 11:33:11] 2025-06-03 08:58:20,948 | INFO     | sum of square deviations: 2871611204.495233
[2025-06-03 11:33:11] 2025-06-03 08:58:20,949 | INFO     | sum of deviations: -24273666716.69525
[2025-06-03 11:33:11] 2025-06-03 08:58:20,950 | INFO     | mean x: 1748934310.504762
[2025-06-03 11:33:11] 2025-06-03 08:58:20,950 | INFO     | mean y: 2536874.6952380952
[2025-06-03 11:33:11] 2025-06-03 08:58:20,950 | INFO     | -- intersect: 14786240356.60449
[2025-06-03 11:33:11] 2025-06-03 08:58:20,950 | INFO     | intersect: 14786240356.60449
[2025-06-03 11:33:11] 2025-06-03 08:58:20,950 | INFO     | chi2: 2.059481868347379
[2025-06-03 11:33:11] 2025-06-03 08:58:20,951 | INFO     | current chi2=2.059481868347379 (change=26.984378007628866 %)
[2025-06-03 11:33:11] 2025-06-03 08:58:20,951 | INFO     | sum of square deviations: 2671337986.9951305
[2025-06-03 11:33:11] 2025-06-03 08:58:20,953 | INFO     | sum of deviations: -22976866630.346344
[2025-06-03 11:33:11] 2025-06-03 08:58:20,953 | INFO     | mean x: 1748934158.004878
[2025-06-03 11:33:11] 2025-06-03 08:58:20,953 | INFO     | mean y: 2537862.3463414633
[2025-06-03 11:33:11] 2025-06-03 08:58:20,953 | INFO     | -- intersect: 15045571386.88268
[2025-06-03 11:33:11] 2025-06-03 08:58:20,953 | INFO     | intersect: 15045571386.88268
[2025-06-03 11:33:11] 2025-06-03 08:58:20,954 | INFO     | chi2: 2.0584459171556495
[2025-06-03 11:33:11] 2025-06-03 08:58:20,954 | INFO     | current chi2=2.0584459171556495 (change=0.050301544657956734 %)
[2025-06-03 11:33:11] 2025-06-03 08:58:20,954 | INFO     | right removable region: 204
[2025-06-03 11:33:11] 2025-06-03 08:58:20,954 | INFO     | sum of square deviations: 2871610594.495233
[2025-06-03 11:33:11] 2025-06-03 08:58:20,962 | INFO     | sum of deviations: -80226133283.60005
[2025-06-03 11:33:11] 2025-06-03 08:58:20,963 | INFO     | mean x: 1748934615.504762
[2025-06-03 11:33:11] 2025-06-03 08:58:20,963 | INFO     | mean y: 2554886.6
[2025-06-03 11:33:11] 2025-06-03 08:58:20,963 | INFO     | -- intersect: 48863727719.97658
[2025-06-03 11:33:11] 2025-06-03 08:58:20,963 | INFO     | intersect: 48863727719.97658
[2025-06-03 11:33:11] 2025-06-03 08:58:20,963 | INFO     | chi2: 1.0093855091042152
[2025-06-03 11:33:11] 2025-06-03 08:58:20,964 | INFO     | current chi2=1.0093855091042152 (change=64.21385790763412 %)
[2025-06-03 11:33:11] 2025-06-03 08:58:20,964 | INFO     | sum of square deviations: 2671336766.9951305
[2025-06-03 11:33:11] 2025-06-03 08:58:20,965 | INFO     | sum of deviations: -79583113454.439
[2025-06-03 11:33:11] 2025-06-03 08:58:20,966 | INFO     | mean x: 1748934768.004878
[2025-06-03 11:33:11] 2025-06-03 08:58:20,966 | INFO     | mean y: 2554357.43902439
[2025-06-03 11:33:11] 2025-06-03 08:58:20,966 | INFO     | -- intersect: 52105934128.27526
[2025-06-03 11:33:11] 2025-06-03 08:58:20,966 | INFO     | intersect: 52105934128.27526
[2025-06-03 11:33:11] 2025-06-03 08:58:20,966 | INFO     | chi2: 0.9851216175775382
[2025-06-03 11:33:11] 2025-06-03 08:58:20,966 | INFO     | current chi2=0.9851216175775382 (change=2.403828003060009 %)
[2025-06-03 11:33:11] 2025-06-03 08:58:20,967 | INFO     | left removable region: 20
[2025-06-03 11:33:11] 2025-06-03 08:58:20,967 | INFO     | sum of square deviations: 1931602027.99457
[2025-06-03 11:33:11] 2025-06-03 08:58:20,968 | INFO     | sum of deviations: -51394633426.29343
[2025-06-03 11:33:11] 2025-06-03 08:58:20,968 | INFO     | mean x: 1748934737.5054348
[2025-06-03 11:33:11] 2025-06-03 08:58:20,968 | INFO     | mean y: 2559788.2934782607
[2025-06-03 11:33:11] 2025-06-03 08:58:20,969 | INFO     | -- intersect: 46536917496.50314
[2025-06-03 11:33:11] 2025-06-03 08:58:20,969 | INFO     | intersect: 46536917496.50314
[2025-06-03 11:33:11] 2025-06-03 08:58:20,969 | INFO     | chi2: 0.18470635175284586
[2025-06-03 11:33:11] 2025-06-03 08:58:20,969 | INFO     | -- intersect: 46536917496.50314
[2025-06-03 11:33:11] 2025-06-03 08:58:20,969 | INFO     | current memory leak: -26.61 B/s (using 184 data points, chi2=0.18)
[2025-06-03 11:33:11] 2025-06-03 08:58:20,970 | INFO     | ..............................
[2025-06-03 11:33:11] 2025-06-03 08:58:20,970 | INFO     | . Timing measurements:
[2025-06-03 11:33:11] 2025-06-03 08:58:20,970 | INFO     | . get job = 0 s
[2025-06-03 11:33:11] 2025-06-03 08:58:20,970 | INFO     | . initial setup = 4 s
[2025-06-03 11:33:11] 2025-06-03 08:58:20,970 | INFO     | . payload setup = 24 s
[2025-06-03 11:33:11] 2025-06-03 08:58:20,971 | INFO     | . stage-in = 0 s
[2025-06-03 11:33:11] 2025-06-03 08:58:20,971 | INFO     | . payload execution = 13115 s
[2025-06-03 11:33:11] 2025-06-03 08:58:20,971 | INFO     | . stage-out = 2 s
[2025-06-03 11:33:11] 2025-06-03 08:58:20,971 | INFO     | . log creation = 0 s
[2025-06-03 11:33:11] 2025-06-03 08:58:20,971 | INFO     | ..............................
[2025-06-03 11:33:11] 2025-06-03 08:58:21,117 | INFO     | 
[2025-06-03 11:33:11] 2025-06-03 08:58:21,118 | INFO     | job summary report
[2025-06-03 11:33:11] 2025-06-03 08:58:21,118 | INFO     | --------------------------------------------------
[2025-06-03 11:33:11] 2025-06-03 08:58:21,118 | INFO     | PanDA job id: 6677387370
[2025-06-03 11:33:11] 2025-06-03 08:58:21,118 | INFO     | task id: 45006595
[2025-06-03 11:33:11] 2025-06-03 08:58:21,118 | INFO     | errors: (none)
[2025-06-03 11:33:11] 2025-06-03 08:58:21,118 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 11:33:11] 2025-06-03 08:58:21,118 | INFO     | pilot state: finished 
[2025-06-03 11:33:11] 2025-06-03 08:58:21,118 | INFO     | transexitcode: 0
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | exeerrorcode: 0
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | exeerrordiag: 
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | exitcode: 0
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | exitmsg: OK
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | cpuconsumptiontime: 48106 s
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | nevents: 400
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | neventsw: 0
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | pid: 5917
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | pgrp: 5917
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | corecount: 8
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | event service: False
[2025-06-03 11:33:11] 2025-06-03 08:58:21,119 | INFO     | sizes: {0: 2405177, 1: 2405177, 12: 2405205, 17: 2405439, 22: 2405467, 13143: 2435042, 13147: 2443983, 13149: 2444039, 13240: 2444209}
[2025-06-03 11:33:11] 2025-06-03 08:58:21,120 | INFO     | --------------------------------------------------
[2025-06-03 11:33:11] 2025-06-03 08:58:21,120 | INFO     | 
[2025-06-03 11:33:11] 2025-06-03 08:58:21,120 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 11:33:11] 2025-06-03 08:58:21,443 | INFO     | PID=28352 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 11:33:11] 2025-06-03 08:58:21,444 | INFO     | .. there are 9 such processes running
[2025-06-03 11:33:11] 2025-06-03 08:58:21,751 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,751 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,752 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,753 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 11:33:11] 2025-06-03 08:58:21,753 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 11:33:11] 2025-06-03 08:58:21,754 | INFO     | job 6677387370 has completed (purged errors)
[2025-06-03 11:33:11] 2025-06-03 08:58:21,754 | INFO     | overall cleanup function is called
[2025-06-03 11:33:11] 2025-06-03 08:58:22,763 | INFO     | --- collectZombieJob: --- 10, [5917]
[2025-06-03 11:33:11] 2025-06-03 08:58:22,764 | INFO     | zombie collector waiting for pid 5917
[2025-06-03 11:33:11] 2025-06-03 08:58:22,764 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 11:33:11] 2025-06-03 08:58:22,764 | INFO     | collected zombie processes
[2025-06-03 11:33:11] 2025-06-03 08:58:22,764 | INFO     | will attempt to kill all subprocesses of pid=5917
[2025-06-03 11:33:11] 2025-06-03 08:58:22,938 | INFO     | process IDs to be killed: [5917] (in reverse order)
[2025-06-03 11:33:11] 2025-06-03 08:58:23,757 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 11:33:11] 2025-06-03 08:58:23,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 11:33:11] 2025-06-03 08:58:23,761 | INFO     | did not find any defunct processes belonging to 5917
[2025-06-03 11:33:11] 2025-06-03 08:58:23,764 | INFO     | did not find any defunct processes belonging to 5917
[2025-06-03 11:33:11] 2025-06-03 08:58:23,765 | INFO     | ready for new job
[2025-06-03 11:33:11] 2025-06-03 08:58:23,765 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 11:33:11] 2025-06-03 08:58:23,773 | INFO     | **************************************
[2025-06-03 11:33:11] 2025-06-03 08:58:23,773 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 11:33:11] 2025-06-03 08:58:23,773 | INFO     | **************************************
[2025-06-03 11:33:11] 2025-06-03 08:58:23,773 | INFO     | 
[2025-06-03 11:33:11] 2025-06-03 08:58:23,774 | INFO     | pilot is running in a VM
[2025-06-03 11:33:11] 2025-06-03 08:58:23,774 | INFO     | architecture information:
[2025-06-03 11:33:11] 2025-06-03 08:58:23,789 | INFO     | executing command: cat /etc/os-release
[2025-06-03 11:33:11] 2025-06-03 08:58:24,055 | INFO     | cat /etc/os-release:
[2025-06-03 11:33:11] NAME="CentOS Linux"
[2025-06-03 11:33:11] VERSION="7 (Core)"
[2025-06-03 11:33:11] ID="centos"
[2025-06-03 11:33:11] ID_LIKE="rhel fedora"
[2025-06-03 11:33:11] VERSION_ID="7"
[2025-06-03 11:33:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 11:33:11] ANSI_COLOR="0;31"
[2025-06-03 11:33:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 11:33:11] HOME_URL="https://www.centos.org/"
[2025-06-03 11:33:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 11:33:11] 
[2025-06-03 11:33:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 11:33:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 11:33:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 11:33:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 11:33:11] 
[2025-06-03 11:33:11] 2025-06-03 08:58:24,055 | INFO     | **************************************
[2025-06-03 11:33:11] 2025-06-03 08:58:24,559 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 11:33:11] 2025-06-03 08:58:24,685 | INFO     | sufficient remaining disk space (496876126208 B)
[2025-06-03 11:33:11] 2025-06-03 08:58:24,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 11:33:11] 2025-06-03 08:58:24,686 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 11:33:11] 2025-06-03 08:58:24,686 | INFO     | update_server=False
[2025-06-03 11:33:11] 2025-06-03 08:58:24,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 11:33:11] 2025-06-03 08:58:24,688 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:33:11] 2025-06-03 08:58:24,688 | INFO     | aborting loop
[2025-06-03 11:33:11] 2025-06-03 08:58:24,690 | INFO     | all data control threads have been joined
[2025-06-03 11:33:11] 2025-06-03 08:58:25,087 | INFO     | all job control threads have been joined
[2025-06-03 11:33:11] 2025-06-03 08:58:25,457 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 11:33:11] 2025-06-03 08:58:25,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 11:33:11] 2025-06-03 08:58:25,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 11:33:11] 2025-06-03 08:58:25,513 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 11:33:11] 2025-06-03 08:58:25,525 | INFO     | all payload control threads have been joined
[2025-06-03 11:33:11] 2025-06-03 08:58:25,602 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 11:33:11] 2025-06-03 08:58:25,692 | INFO     | [job] retrieve thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:25,694 | INFO     | [job] job monitor thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:25,697 | INFO     | [data] control thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:25,793 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:25,805 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:26,094 | INFO     | [job] control thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:26,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 11:33:11] 2025-06-03 08:58:26,379 | INFO     | [payload] validate_post thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:26,387 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:26,416 | INFO     | [payload] failed_post thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:26,427 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:26,506 | INFO     | [data] copytool_in thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:26,518 | INFO     | [job] validate thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:26,532 | INFO     | [payload] control thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:27,138 | INFO     | [job] queue monitor thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:27,519 | INFO     | [data] copytool_out thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:29,612 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 11:33:11] 2025-06-03 08:58:29,761 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140647671469888)>', '<ExcThread(monitor, started 140647092713216)>']
[2025-06-03 11:33:11] 2025-06-03 08:58:30,485 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 11:33:11] 2025-06-03 08:58:30,486 | INFO     | [monitor] control thread has ended
[2025-06-03 11:33:11] 2025-06-03 08:58:34,786 | INFO     | all workflow threads have been joined
[2025-06-03 11:33:11] 2025-06-03 08:58:34,787 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 11:33:11] 2025-06-03 08:58:34,787 | INFO     | traces error code: 0
[2025-06-03 11:33:11] 2025-06-03 08:58:34,787 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 11:33:11] 2025-06-03 08:58:35,120 [wrapper] ==== pilot stdout END ====
[2025-06-03 11:33:11] 2025-06-03 08:58:35,135 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 11:33:11] 2025-06-03 08:58:35,173 [wrapper] pilotpid: 28352
[2025-06-03 11:33:11] 2025-06-03 08:58:35,187 [wrapper] Pilot exit status: 0
[2025-06-03 11:33:11] 2025-06-03 08:58:35,440 [wrapper] pandaids: 6677387370
[2025-06-03 11:33:11] 2025-06-03 08:58:35,497 [wrapper] cleanup supervisor_pilot 11541 28353
[2025-06-03 11:33:11] 2025-06-03 08:58:35,546 [wrapper] Test setup, not cleaning
[2025-06-03 11:33:11] 2025-06-03 08:58:35,593 [wrapper] apfmon messages muted
[2025-06-03 11:33:11] 2025-06-03 08:58:35,691 [wrapper] ==== wrapper stdout END ====
[2025-06-03 11:33:11] 2025-06-03 08:58:35,759 [wrapper] ==== wrapper stderr END ====
[2025-06-03 11:33:11]  *** Error codes and diagnostics ***
[2025-06-03 11:33:11]     "exeErrorCode": 0,
[2025-06-03 11:33:11]     "exeErrorDiag": "",
[2025-06-03 11:33:11]     "pilotErrorCode": 0,
[2025-06-03 11:33:11]     "pilotErrorDiag": "",
[2025-06-03 11:33:11]  *** Listing of results directory ***
[2025-06-03 11:33:11] total 388484
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:18 pilot3.tar.gz
[2025-06-03 11:33:11] -rwx------. 1 boinc boinc     37140 Jun  2 19:21 runpilot2-wrapper.sh
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:21 queuedata.json
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc       100 Jun  3 07:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 11:33:11] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 07:16 run_atlas
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc       105 Jun  3 07:16 job.xml
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc      6391 Jun  3 07:16 init_data.xml
[2025-06-03 11:33:11] -rw-r--r--. 2 boinc boinc 216749269 Jun  3 07:16 EVNT.45006593._000215.pool.root.1
[2025-06-03 11:33:11] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:16 start_atlas.sh
[2025-06-03 11:33:11] drwxrwx--x. 2 boinc boinc        68 Jun  3 07:16 shared
[2025-06-03 11:33:11] -rw-r--r--. 2 boinc boinc    508874 Jun  3 07:16 input.tar.gz
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc         0 Jun  3 07:16 boinc_lockfile
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc      2521 Jun  3 07:16 pandaJob.out
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc    988073 Jun  3 07:16 agis_schedconf.cvmfs.json
[2025-06-03 11:33:11] drwx------. 4 boinc boinc      4096 Jun  3 07:17 pilot3
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc 174150063 Jun  3 10:55 HITS.45006595._005377.pool.root.1
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc       531 Jun  3 10:55 boinc_task_state.xml
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc      1016 Jun  3 10:56 memory_monitor_summary.json
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc   1603667 Jun  3 10:56 agis_ddmendpoints.agis.ALL.json
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc    393436 Jun  3 10:56 log.45006595._005377.job.log.tgz.1
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc        95 Jun  3 10:57 pilot_heartbeat.json
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc      7704 Jun  3 10:58 heartbeat.json
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc      4416 Jun  3 10:58 pilotlog.txt
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc   1147645 Jun  3 10:58 log.45006595._005377.job.log.1
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc       357 Jun  3 10:58 output.list
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc       620 Jun  3 10:58 runtime_log
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc   1556480 Jun  3 10:58 result.tar.gz
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc      8659 Jun  3 10:58 runtime_log.err
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc       656 Jun  3 10:58 1iAODmk1Ng7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmOifKDmhRDBCn.diag
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc      8192 Jun  3 11:33 boinc_mmap_file
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc        28 Jun  3 11:33 wrapper_checkpoint.txt
[2025-06-03 11:33:11] -rw-r--r--. 1 boinc boinc     20610 Jun  3 11:33 stderr.txt
[2025-06-03 11:33:11] HITS file was successfully produced:
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc 174150063 Jun  3 10:55 shared/HITS.pool.root.1
[2025-06-03 11:33:11]  *** Contents of shared directory: ***
[2025-06-03 11:33:11] total 383780
[2025-06-03 11:33:11] -rw-r--r--. 2 boinc boinc 216749269 Jun  3 07:16 ATLAS.root_0
[2025-06-03 11:33:11] -rw-r--r--. 2 boinc boinc     15093 Jun  3 07:16 start_atlas.sh
[2025-06-03 11:33:11] -rw-r--r--. 2 boinc boinc    508874 Jun  3 07:16 input.tar.gz
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc 174150063 Jun  3 10:55 HITS.pool.root.1
[2025-06-03 11:33:11] -rw-------. 1 boinc boinc   1556480 Jun  3 10:58 result.tar.gz
11:33:13 (24341): run_atlas exited; CPU time 48272.253285
11:33:13 (24341): called boinc_finish(0)

</stderr_txt>
]]>

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