Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:46:43 (1525771): wrapper (7.7.26015): starting
02:46:43 (1525771): wrapper: running run_atlas (--nthreads 12)
[2025-06-03 02:46:43] Arguments: --nthreads 12
[2025-06-03 02:46:43] Threads: 12
[2025-06-03 02:46:43] Checking for CVMFS
[2025-06-03 02:46:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 02:46:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 02:46:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 02:47:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 02:47:57] 2.12.7.0 9268 6294 126172 146723 2 247 30654078 46080000 59235 130560 0 33549314 99.941 6384216 20147 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://[2001:718:401:6025:1:0:2:0]:3128 1
[2025-06-03 02:47:57] CVMFS is ok
[2025-06-03 02:47:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-03 02:47:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-03 02:47:57] Further information can be found at the LHC@home message board.
[2025-06-03 02:47:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 02:47:57] Checking for apptainer binary...
[2025-06-03 02:47:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 02:47:57] Running /usr/bin/apptainer --version
[2025-06-03 02:47:57] apptainer version 1.4.1-1.el9
[2025-06-03 02:47:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:47:57] mff2104.farm.particle.cz
[2025-06-03 02:47:57] apptainer works
[2025-06-03 02:47:57] Set ATHENA_PROC_NUMBER=12
[2025-06-03 02:47:57] Set ATHENA_CORE_NUMBER=12
[2025-06-03 02:47:58] Starting ATLAS job with PandaID=6677380571
[2025-06-03 02:47:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/scratch/.boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:09:08]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:09:08]  status_code=0
[2025-06-03 04:09:08]  storage_token=
[2025-06-03 04:09:08]  surl=/scratch/.boinc/slots/6/PanDA_Pilot-6677380571/log.45006595._002203.job.log.tgz.1
[2025-06-03 04:09:08]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/d7/log.45006595._002203.job.log.tgz.1
[2025-06-03 04:09:08]  workdir=None
[2025-06-03 04:09:08] ]
[2025-06-03 04:09:08] 2025-06-03 01:53:55,121 | INFO     | transferring file log.45006595._002203.job.log.tgz.1 from /scratch/.boinc/slots/6/PanDA_Pilot-6677380571/log.45006595._002203.job.log.tgz.1 to /scratch/.boinc/slot
[2025-06-03 04:09:08] 2025-06-03 01:53:55,122 | INFO     | executing command: /usr/bin/env mv /scratch/.boinc/slots/6/PanDA_Pilot-6677380571/log.45006595._002203.job.log.tgz.1 /scratch/.boinc/slots/6/log.45006595._002203.j
[2025-06-03 04:09:08] 2025-06-03 01:53:55,181 | INFO     | adding to output.list: log.45006595._002203.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/30/d7/log.45006595._002203.job.log.tg
[2025-06-03 04:09:08] 2025-06-03 01:53:55,182 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-03 04:09:08] 2025-06-03 01:53:55,182 | INFO     | summary of transferred files:
[2025-06-03 04:09:08] 2025-06-03 01:53:55,182 | INFO     |  -- lfn=log.45006595._002203.job.log.tgz.1, status_code=0, status=transferred
[2025-06-03 04:09:08] 2025-06-03 01:53:55,183 | INFO     | stage-out finished correctly
[2025-06-03 04:09:08] 2025-06-03 01:53:57,092 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-03 04:09:08] 2025-06-03 01:53:59,374 | WARNING  | process 1617752 can no longer be monitored (due to stat problems) - aborting
[2025-06-03 04:09:08] 2025-06-03 01:53:59,375 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6677380571/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 04:09:08] 2025-06-03 01:53:59,866 | INFO     | job 6677380571 has state=finished
[2025-06-03 04:09:08] 2025-06-03 01:53:59,866 | INFO     | preparing for final server update for job 6677380571 in state='finished'
[2025-06-03 04:09:08] 2025-06-03 01:54:00,327 | INFO     | PID=1563648 has CPU usage=20.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-03 04:09:08] 2025-06-03 01:54:00,327 | INFO     | .. there are 96 such processes running
[2025-06-03 04:09:08] 2025-06-03 01:54:00,521 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-03 04:09:08] 2025-06-03 01:54:00,525 | INFO     | this job has now completed (state=finished)
[2025-06-03 04:09:08] 2025-06-03 01:54:00,525 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-03 04:09:08] 2025-06-03 01:54:00,526 | INFO     | log transfer has been attempted: DONE
[2025-06-03 04:09:08] 2025-06-03 01:54:00,526 | INFO     | job 6677380571 has finished - writing final server update
[2025-06-03 04:09:08] 2025-06-03 01:54:00,526 | INFO     | total number of processed events: 400 (read)
[2025-06-03 04:09:08] 2025-06-03 01:54:00,534 | INFO     | executing command: lscpu
[2025-06-03 04:09:08] 2025-06-03 01:54:00,652 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-03 04:09:08] 2025-06-03 01:54:00,711 | INFO     | number of running child processes to parent process 1617752: 1
[2025-06-03 04:09:08] 2025-06-03 01:54:00,712 | INFO     | maximum number of monitored processes: 7
[2025-06-03 04:09:08] 2025-06-03 01:54:03,217 | INFO     | monitor loop #287: job 0:6677380571 is in state 'finished'
[2025-06-03 04:09:08] 2025-06-03 01:54:03,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:09:08] 2025-06-03 01:54:05,723 | INFO     | monitor loop #288: job 0:6677380571 is in state 'finished'
[2025-06-03 04:09:08] 2025-06-03 01:54:05,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:09:08] 2025-06-03 01:54:08,228 | INFO     | monitor loop #289: job 0:6677380571 is in state 'finished'
[2025-06-03 04:09:08] 2025-06-03 01:54:08,228 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:09:08] 2025-06-03 01:54:10,733 | INFO     | monitor loop #290: job 0:6677380571 is in state 'finished'
[2025-06-03 04:09:08] 2025-06-03 01:54:10,733 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:09:08] 2025-06-03 01:54:13,238 | INFO     | monitor loop #291: job 0:6677380571 is in state 'finished'
[2025-06-03 04:09:08] 2025-06-03 01:54:13,238 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 04:09:08] 2025-06-03 01:54:13,510 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 04:09:08] 2025-06-03 01:54:13,510 | INFO     | using path: /scratch/.boinc/slots/6/PanDA_Pilot-6677380571/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 04:09:08] 2025-06-03 01:54:13,511 | INFO     | extracted standard info from prmon json
[2025-06-03 04:09:08] 2025-06-03 01:54:13,511 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 04:09:08] 2025-06-03 01:54:13,511 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 04:09:08] 2025-06-03 01:54:13,511 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:09:08] 2025-06-03 01:54:13,512 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:09:08] 2025-06-03 01:54:13,513 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:09:08] 2025-06-03 01:54:13,513 | INFO     | sum of square deviations: 46147842.0
[2025-06-03 04:09:08] 2025-06-03 01:54:13,513 | INFO     | sum of deviations: 11163684969.000002
[2025-06-03 04:09:08] 2025-06-03 01:54:13,514 | INFO     | mean x: 1748913871.0
[2025-06-03 04:09:08] 2025-06-03 01:54:13,514 | INFO     | mean y: 2749431.0566037735
[2025-06-03 04:09:08] 2025-06-03 01:54:13,514 | INFO     | -- intersect: -423079298343.96844
[2025-06-03 04:09:08] 2025-06-03 01:54:13,514 | INFO     | intersect: -423079298343.96844
[2025-06-03 04:09:08] 2025-06-03 01:54:13,514 | INFO     | chi2: 0.8381976654675782
[2025-06-03 04:09:08] 2025-06-03 01:54:13,514 | INFO     | -- intersect: -423079298343.96844
[2025-06-03 04:09:08] 2025-06-03 01:54:13,514 | INFO     | current memory leak: 241.91 B/s (using 53 data points, chi2=0.84)
[2025-06-03 04:09:08] 2025-06-03 01:54:13,514 | INFO     | ..............................
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | . Timing measurements:
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | . get job = 0 s
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | . initial setup = 6 s
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | . payload setup = 71 s
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | . stage-in = 0 s
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | . payload execution = 3692 s
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | . stage-out = 0 s
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | . log creation = 0 s
[2025-06-03 04:09:08] 2025-06-03 01:54:13,515 | INFO     | ..............................
[2025-06-03 04:09:08] 2025-06-03 01:54:13,606 | INFO     | 
[2025-06-03 04:09:08] 2025-06-03 01:54:13,606 | INFO     | job summary report
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | --------------------------------------------------
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | PanDA job id: 6677380571
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | task id: 45006595
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | errors: (none)
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | pilot state: finished 
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | transexitcode: 0
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | exeerrorcode: 0
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | exeerrordiag: 
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | exitcode: 0
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | exitmsg: OK
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | cpuconsumptiontime: 33056 s
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | nevents: 400
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | neventsw: 0
[2025-06-03 04:09:08] 2025-06-03 01:54:13,607 | INFO     | pid: 1617752
[2025-06-03 04:09:08] 2025-06-03 01:54:13,608 | INFO     | pgrp: 1617752
[2025-06-03 04:09:08] 2025-06-03 01:54:13,608 | INFO     | corecount: 12
[2025-06-03 04:09:08] 2025-06-03 01:54:13,608 | INFO     | event service: False
[2025-06-03 04:09:08] 2025-06-03 01:54:13,608 | INFO     | sizes: {0: 2404342, 1: 2405028, 2: 2405227, 13: 2405227, 24: 2405283, 35: 2405311, 46: 2405673, 56: 2405701, 3768: 2431349, 3769: 2440292, 3771: 2440348, 3787: 244
[2025-06-03 04:09:08] 2025-06-03 01:54:13,608 | INFO     | --------------------------------------------------
[2025-06-03 04:09:08] 2025-06-03 01:54:13,608 | INFO     | 
[2025-06-03 04:09:08] 2025-06-03 01:54:13,608 | INFO     | executing command: ls -lF /scratch/.boinc/slots/6
[2025-06-03 04:09:08] 2025-06-03 01:54:13,641 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,641 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,641 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,641 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,641 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,641 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,641 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,641 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,642 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:09:08] 2025-06-03 01:54:13,643 | INFO     | job 6677380571 has completed (purged errors)
[2025-06-03 04:09:08] 2025-06-03 01:54:13,643 | INFO     | overall cleanup function is called
[2025-06-03 04:09:08] 2025-06-03 01:54:14,653 | INFO     | --- collectZombieJob: --- 10, [1617752]
[2025-06-03 04:09:08] 2025-06-03 01:54:14,653 | INFO     | zombie collector waiting for pid 1617752
[2025-06-03 04:09:08] 2025-06-03 01:54:14,653 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:09:08] 2025-06-03 01:54:14,653 | INFO     | collected zombie processes
[2025-06-03 04:09:08] 2025-06-03 01:54:14,653 | INFO     | will attempt to kill all subprocesses of pid=1617752
[2025-06-03 04:09:08] 2025-06-03 01:54:15,315 | INFO     | process IDs to be killed: [1617752] (in reverse order)
[2025-06-03 04:09:08] 2025-06-03 01:54:15,550 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:09:08] 2025-06-03 01:54:15,550 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:09:08] 2025-06-03 01:54:15,580 | INFO     | did not find any defunct processes belonging to 1617752
[2025-06-03 04:09:08] 2025-06-03 01:54:15,609 | INFO     | did not find any defunct processes belonging to 1617752
[2025-06-03 04:09:08] 2025-06-03 01:54:15,609 | INFO     | ready for new job
[2025-06-03 04:09:08] 2025-06-03 01:54:15,609 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:09:08] 2025-06-03 01:54:15,613 | INFO     | **************************************
[2025-06-03 04:09:08] 2025-06-03 01:54:15,613 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:09:08] 2025-06-03 01:54:15,613 | INFO     | **************************************
[2025-06-03 04:09:08] 2025-06-03 01:54:15,613 | INFO     | 
[2025-06-03 04:09:08] 2025-06-03 01:54:15,619 | INFO     | architecture information:
[2025-06-03 04:09:08] 2025-06-03 01:54:15,619 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:09:08] 2025-06-03 01:54:15,646 | INFO     | cat /etc/os-release:
[2025-06-03 04:09:08] NAME="CentOS Linux"
[2025-06-03 04:09:08] VERSION="7 (Core)"
[2025-06-03 04:09:08] ID="centos"
[2025-06-03 04:09:08] ID_LIKE="rhel fedora"
[2025-06-03 04:09:08] VERSION_ID="7"
[2025-06-03 04:09:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:09:08] ANSI_COLOR="0;31"
[2025-06-03 04:09:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:09:08] HOME_URL="https://www.centos.org/"
[2025-06-03 04:09:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:09:08] 
[2025-06-03 04:09:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:09:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:09:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:09:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:09:08] 
[2025-06-03 04:09:08] 2025-06-03 01:54:15,646 | INFO     | **************************************
[2025-06-03 04:09:08] 2025-06-03 01:54:16,149 | INFO     | executing command: df -mP /scratch/.boinc/slots/6
[2025-06-03 04:09:08] 2025-06-03 01:54:16,176 | INFO     | sufficient remaining disk space (1668537122816 B)
[2025-06-03 04:09:08] 2025-06-03 01:54:16,176 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:09:08] 2025-06-03 01:54:16,176 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:09:08] 2025-06-03 01:54:16,176 | INFO     | update_server=False
[2025-06-03 04:09:08] 2025-06-03 01:54:16,177 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:09:08] 2025-06-03 01:54:16,177 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:09:08] 2025-06-03 01:54:16,353 | INFO     | all data control threads have been joined
[2025-06-03 04:09:08] 2025-06-03 01:54:16,376 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:09:08] 2025-06-03 01:54:16,376 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:09:08] 2025-06-03 01:54:16,376 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:09:08] 2025-06-03 01:54:16,721 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:09:08] 2025-06-03 01:54:16,746 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:09:08] 2025-06-03 01:54:16,746 | INFO     | aborting loop
[2025-06-03 04:09:08] 2025-06-03 01:54:16,934 | INFO     | all payload control threads have been joined
[2025-06-03 04:09:08] 2025-06-03 01:54:17,182 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:17,198 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:17,358 | INFO     | [data] control thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:17,500 | INFO     | all job control threads have been joined
[2025-06-03 04:09:08] 2025-06-03 01:54:17,506 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:17,551 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:17,751 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:17,939 | INFO     | [payload] control thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:18,182 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:18,205 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:18,257 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:18,288 | INFO     | [job] validate thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:18,293 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:18,505 | INFO     | [job] control thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:18,617 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:09:08] 2025-06-03 01:54:19,622 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:20,727 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:26,398 | INFO     | job.realtimelogging is not enabled
[2025-06-03 04:09:08] 2025-06-03 01:54:27,404 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:09:08] 2025-06-03 01:54:28,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644425807680)>', '<ExcThread(monitor, started 139643915843328)>']
[2025-06-03 04:09:08] 2025-06-03 01:54:29,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:09:08] 2025-06-03 01:54:29,447 | INFO     | [monitor] control thread has ended
[2025-06-03 04:09:08] 2025-06-03 01:54:33,881 | INFO     | all workflow threads have been joined
[2025-06-03 04:09:08] 2025-06-03 01:54:33,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:09:08] 2025-06-03 01:54:33,882 | INFO     | traces error code: 0
[2025-06-03 04:09:08] 2025-06-03 01:54:33,882 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:09:08] 2025-06-03 01:54:34,157 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:09:08] 2025-06-03 01:54:34,162 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:09:08] 2025-06-03 01:54:34,177 [wrapper] pilotpid: 1563648
[2025-06-03 04:09:08] 2025-06-03 01:54:34,191 [wrapper] Pilot exit status: 0
[2025-06-03 04:09:08] 2025-06-03 01:54:34,232 [wrapper] pandaids: 6677380571
[2025-06-03 04:09:08] 2025-06-03 01:54:34,435 [wrapper] cleanup supervisor_pilot 2043874 1563649
[2025-06-03 04:09:08] 2025-06-03 01:54:34,446 [wrapper] Test setup, not cleaning
[2025-06-03 04:09:08] 2025-06-03 01:54:34,452 [wrapper] apfmon messages muted
[2025-06-03 04:09:08] 2025-06-03 01:54:34,491 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:09:08] 2025-06-03 01:54:34,501 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:09:08]  *** Error codes and diagnostics ***
[2025-06-03 04:09:08]     "exeErrorCode": 0,
[2025-06-03 04:09:08]     "exeErrorDiag": "",
[2025-06-03 04:09:08]     "pilotErrorCode": 0,
[2025-06-03 04:09:08]     "pilotErrorDiag": "",
[2025-06-03 04:09:08]  *** Listing of results directory ***
[2025-06-03 04:09:08] total 386924
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:48 queuedata.json
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 04:09:08] -rwx------ 1 boinc boinc     37140 Jun  2 17:48 runpilot2-wrapper.sh
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc       100 Jun  3 02:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:09:08] -rwxr-xr-x 1 boinc boinc      7986 Jun  3 02:46 run_atlas
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc       105 Jun  3 02:46 job.xml
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc      6664 Jun  3 02:46 init_data.xml
[2025-06-03 04:09:08] -rw-r--r-- 2 boinc boinc 214797936 Jun  3 02:46 EVNT.45006593._000089.pool.root.1
[2025-06-03 04:09:08] drwxrwx--x 2 boinc boinc      4096 Jun  3 02:46 shared
[2025-06-03 04:09:08] -rw-r--r-- 2 boinc boinc    508870 Jun  3 02:46 input.tar.gz
[2025-06-03 04:09:08] -rw-r--r-- 2 boinc boinc     15093 Jun  3 02:46 start_atlas.sh
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc         0 Jun  3 02:46 boinc_lockfile
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc      2518 Jun  3 02:47 pandaJob.out
[2025-06-03 04:09:08] -rw------- 1 boinc boinc    988081 Jun  3 02:49 agis_schedconf.cvmfs.json
[2025-06-03 04:09:08] -rw------- 1 boinc boinc   1603667 Jun  3 02:49 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:09:08] drwx------ 4 boinc boinc      4096 Jun  3 02:49 pilot3
[2025-06-03 04:09:08] -rw------- 1 boinc boinc 176154730 Jun  3 03:53 HITS.45006595._002203.pool.root.1
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc       528 Jun  3 03:53 boinc_task_state.xml
[2025-06-03 04:09:08] -rw------- 1 boinc boinc        95 Jun  3 03:53 pilot_heartbeat.json
[2025-06-03 04:09:08] -rw------- 1 boinc boinc      1014 Jun  3 03:53 memory_monitor_summary.json
[2025-06-03 04:09:08] -rw------- 1 boinc boinc    337173 Jun  3 03:53 log.45006595._002203.job.log.tgz.1
[2025-06-03 04:09:08] -rw------- 1 boinc boinc      7675 Jun  3 03:54 heartbeat.json
[2025-06-03 04:09:08] -rw------- 1 boinc boinc      4428 Jun  3 03:54 pilotlog.txt
[2025-06-03 04:09:08] -rw------- 1 boinc boinc    368983 Jun  3 03:54 log.45006595._002203.job.log.1
[2025-06-03 04:09:08] -rw------- 1 boinc boinc       357 Jun  3 03:54 output.list
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc       620 Jun  3 03:54 runtime_log
[2025-06-03 04:09:08] -rw------- 1 boinc boinc    727040 Jun  3 03:54 result.tar.gz
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc      8720 Jun  3 03:54 runtime_log.err
[2025-06-03 04:09:08] -rw------- 1 boinc boinc       661 Jun  3 03:54 FTqLDm4ZMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgxeKDmoUD2gn.diag
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc        25 Jun  3 04:09 wrapper_checkpoint.txt
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc      8192 Jun  3 04:09 boinc_mmap_file
[2025-06-03 04:09:08] -rw-r--r-- 1 boinc boinc     22229 Jun  3 04:09 stderr.txt
[2025-06-03 04:09:08] HITS file was successfully produced:
[2025-06-03 04:09:08] -rw------- 1 boinc boinc 176154730 Jun  3 03:53 shared/HITS.pool.root.1
[2025-06-03 04:09:08]  *** Contents of shared directory: ***
[2025-06-03 04:09:08] total 383028
[2025-06-03 04:09:08] -rw-r--r-- 2 boinc boinc 214797936 Jun  3 02:46 ATLAS.root_0
[2025-06-03 04:09:08] -rw-r--r-- 2 boinc boinc    508870 Jun  3 02:46 input.tar.gz
[2025-06-03 04:09:08] -rw-r--r-- 2 boinc boinc     15093 Jun  3 02:46 start_atlas.sh
[2025-06-03 04:09:08] -rw------- 1 boinc boinc 176154730 Jun  3 03:53 HITS.pool.root.1
[2025-06-03 04:09:08] -rw------- 1 boinc boinc    727040 Jun  3 03:54 result.tar.gz
04:09:10 (1525771): run_atlas exited; CPU time 33267.558232
04:09:10 (1525771): called boinc_finish(0)

</stderr_txt>
]]>

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