Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
06:36:42 (3943152): wrapper (7.7.26015): starting
06:36:42 (3943152): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 06:36:42] Arguments: --nthreads 4
[2025-06-04 06:36:42] Threads: 4
[2025-06-04 06:36:42] Checking for CVMFS
[2025-06-04 06:36:42] No cvmfs_config command found, will try listing directly
[2025-06-04 06:36:42] CVMFS is ok
[2025-06-04 06:36:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 06:36:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 06:36:42] Further information can be found at the LHC@home message board.
[2025-06-04 06:36:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 06:36:42] Checking for apptainer binary...
[2025-06-04 06:36:42] which: no apptainer in ((null))
[2025-06-04 06:36:42] apptainer is not installed, using version from CVMFS
[2025-06-04 06:36:42] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 06:36:42] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-06-04 06:36:42] apptainer works
[2025-06-04 06:36:43] Set ATHENA_PROC_NUMBER=4
[2025-06-04 06:36:43] Set ATHENA_CORE_NUMBER=4
[2025-06-04 06:36:43] Starting ATLAS job with PandaID=6677382057
[2025-06-04 06:36:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 08:42:12]  *** The last 200 lines of the pilot log: ***
[2025-06-04 08:42:12] 2025-06-04 06:40:21,024 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 08:42:12] 2025-06-04 06:40:22,038 | INFO     | monitor loop #519: job 0:6677382057 is in state 'finished'
[2025-06-04 08:42:12] 2025-06-04 06:40:22,038 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:42:12] 2025-06-04 06:40:24,541 | INFO     | monitor loop #520: job 0:6677382057 is in state 'finished'
[2025-06-04 08:42:12] 2025-06-04 06:40:24,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,044 | INFO     | monitor loop #521: job 0:6677382057 is in state 'finished'
[2025-06-04 08:42:12] 2025-06-04 06:40:27,045 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,313 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 08:42:12] 2025-06-04 06:40:27,314 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6677382057/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,314 | INFO     | extracted standard info from prmon json
[2025-06-04 08:42:12] 2025-06-04 06:40:27,314 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 08:42:12] 2025-06-04 06:40:27,314 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 08:42:12] 2025-06-04 06:40:27,315 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 08:42:12] 2025-06-04 06:40:27,315 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 08:42:12] 2025-06-04 06:40:27,317 | INFO     | fitting pss+swap vs Time
[2025-06-04 08:42:12] 2025-06-04 06:40:27,317 | INFO     | sum of square deviations: 549294020.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,318 | INFO     | sum of deviations: 10175052356.999996
[2025-06-04 08:42:12] 2025-06-04 06:40:27,318 | INFO     | mean x: 1749015512.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,318 | INFO     | mean y: 2310251.3305785125
[2025-06-04 08:42:12] 2025-06-04 06:40:27,318 | INFO     | -- intersect: -32396229983.65169
[2025-06-04 08:42:12] 2025-06-04 06:40:27,318 | INFO     | intersect: -32396229983.65169
[2025-06-04 08:42:12] 2025-06-04 06:40:27,319 | INFO     | chi2: 1.6000096888349387
[2025-06-04 08:42:12] 2025-06-04 06:40:27,319 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,319 | INFO     | sum of deviations: 9724005547.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,319 | INFO     | mean x: 1749015359.5
[2025-06-04 08:42:12] 2025-06-04 06:40:27,320 | INFO     | mean y: 2309197.4655172415
[2025-06-04 08:42:12] 2025-06-04 06:40:27,320 | INFO     | -- intersect: -35139062207.59788
[2025-06-04 08:42:12] 2025-06-04 06:40:27,320 | INFO     | intersect: -35139062207.59788
[2025-06-04 08:42:12] 2025-06-04 06:40:27,320 | INFO     | chi2: 1.6028790936474993
[2025-06-04 08:42:12] 2025-06-04 06:40:27,320 | INFO     | current chi2=1.6028790936474993 (change=-0.17933671480764452 %)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,320 | INFO     | right removable region: 115
[2025-06-04 08:42:12] 2025-06-04 06:40:27,320 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,321 | INFO     | sum of deviations: -7640278060.000001
[2025-06-04 08:42:12] 2025-06-04 06:40:27,321 | INFO     | mean x: 1749015664.5
[2025-06-04 08:42:12] 2025-06-04 06:40:27,321 | INFO     | mean y: 2351064.293103448
[2025-06-04 08:42:12] 2025-06-04 06:40:27,321 | INFO     | -- intersect: 27613389999.53301
[2025-06-04 08:42:12] 2025-06-04 06:40:27,321 | INFO     | intersect: 27613389999.53301
[2025-06-04 08:42:12] 2025-06-04 06:40:27,321 | INFO     | chi2: 0.01928383829414099
[2025-06-04 08:42:12] 2025-06-04 06:40:27,321 | INFO     | current chi2=0.01928383829414099 (change=98.79476740492848 %)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,322 | INFO     | sum of square deviations: 424045160.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,322 | INFO     | sum of deviations: -6610557678.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,322 | INFO     | mean x: 1749015817.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,322 | INFO     | mean y: 2348427.378378378
[2025-06-04 08:42:12] 2025-06-04 06:40:27,322 | INFO     | -- intersect: 27268241376.169006
[2025-06-04 08:42:12] 2025-06-04 06:40:27,322 | INFO     | intersect: 27268241376.169006
[2025-06-04 08:42:12] 2025-06-04 06:40:27,323 | INFO     | chi2: 0.019051304071221242
[2025-06-04 08:42:12] 2025-06-04 06:40:27,323 | INFO     | current chi2=0.019051304071221242 (change=1.205850305177051 %)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,323 | INFO     | left removable region: 20
[2025-06-04 08:42:12] 2025-06-04 06:40:27,323 | INFO     | sum of square deviations: 265828240.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,323 | INFO     | sum of deviations: -3351216536.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,324 | INFO     | mean x: 1749015939.0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,324 | INFO     | mean y: 2339398.2
[2025-06-04 08:42:12] 2025-06-04 06:40:27,324 | INFO     | -- intersect: 22051656417.73249
[2025-06-04 08:42:12] 2025-06-04 06:40:27,324 | INFO     | intersect: 22051656417.73249
[2025-06-04 08:42:12] 2025-06-04 06:40:27,324 | INFO     | chi2: 0.01261594583727461
[2025-06-04 08:42:12] 2025-06-04 06:40:27,324 | INFO     | -- intersect: 22051656417.73249
[2025-06-04 08:42:12] 2025-06-04 06:40:27,324 | INFO     | current memory leak: -12.61 B/s (using 95 data points, chi2=0.01)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | ..............................
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | . Timing measurements:
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | . get job = 0 s
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | . initial setup = 1 s
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | . payload setup = 10 s
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | . stage-in = 0 s
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | . payload execution = 7370 s
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | . stage-out = 0 s
[2025-06-04 08:42:12] 2025-06-04 06:40:27,325 | INFO     | . log creation = 0 s
[2025-06-04 08:42:12] 2025-06-04 06:40:27,326 | INFO     | ..............................
[2025-06-04 08:42:12] 2025-06-04 06:40:27,676 | INFO     | 
[2025-06-04 08:42:12] 2025-06-04 06:40:27,676 | INFO     | job summary report
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | --------------------------------------------------
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | PanDA job id: 6677382057
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | task id: 45006595
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | errors: (none)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | pilot state: finished 
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | transexitcode: 0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | exeerrorcode: 0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | exeerrordiag: 
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | exitcode: 0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | exitmsg: OK
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | cpuconsumptiontime: 28118 s
[2025-06-04 08:42:12] 2025-06-04 06:40:27,677 | INFO     | nevents: 400
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | neventsw: 0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | pid: 3954482
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | pgrp: 3954482
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | corecount: 4
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | event service: False
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | sizes: {0: 2405190, 1: 2405218, 7: 2405424, 11: 2405452, 7384: 2432884, 7385: 2441849, 7386: 2442033, 7393: 2442203}
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | --------------------------------------------------
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | 
[2025-06-04 08:42:12] 2025-06-04 06:40:27,678 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-06-04 08:42:12] 2025-06-04 06:40:27,704 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,704 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,704 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,704 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,705 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 08:42:12] 2025-06-04 06:40:27,706 | INFO     | job 6677382057 has completed (purged errors)
[2025-06-04 08:42:12] 2025-06-04 06:40:27,706 | INFO     | overall cleanup function is called
[2025-06-04 08:42:12] 2025-06-04 06:40:28,712 | INFO     | --- collectZombieJob: --- 10, [3954482]
[2025-06-04 08:42:12] 2025-06-04 06:40:28,712 | INFO     | zombie collector waiting for pid 3954482
[2025-06-04 08:42:12] 2025-06-04 06:40:28,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 08:42:12] 2025-06-04 06:40:28,713 | INFO     | collected zombie processes
[2025-06-04 08:42:12] 2025-06-04 06:40:28,713 | INFO     | will attempt to kill all subprocesses of pid=3954482
[2025-06-04 08:42:12] 2025-06-04 06:40:29,304 | INFO     | process IDs to be killed: [3954482] (in reverse order)
[2025-06-04 08:42:12] 2025-06-04 06:40:29,541 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 08:42:12] 2025-06-04 06:40:29,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 08:42:12] 2025-06-04 06:40:29,565 | INFO     | did not find any defunct processes belonging to 3954482
[2025-06-04 08:42:12] 2025-06-04 06:40:29,587 | INFO     | did not find any defunct processes belonging to 3954482
[2025-06-04 08:42:12] 2025-06-04 06:40:29,587 | INFO     | ready for new job
[2025-06-04 08:42:12] 2025-06-04 06:40:29,587 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 08:42:12] 2025-06-04 06:40:29,589 | INFO     | **************************************
[2025-06-04 08:42:12] 2025-06-04 06:40:29,589 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 08:42:12] 2025-06-04 06:40:29,589 | INFO     | **************************************
[2025-06-04 08:42:12] 2025-06-04 06:40:29,589 | INFO     | 
[2025-06-04 08:42:12] 2025-06-04 06:40:29,597 | INFO     | architecture information:
[2025-06-04 08:42:12] 2025-06-04 06:40:29,597 | INFO     | executing command: cat /etc/os-release
[2025-06-04 08:42:12] 2025-06-04 06:40:29,620 | INFO     | cat /etc/os-release:
[2025-06-04 08:42:12] NAME="CentOS Linux"
[2025-06-04 08:42:12] VERSION="7 (Core)"
[2025-06-04 08:42:12] ID="centos"
[2025-06-04 08:42:12] ID_LIKE="rhel fedora"
[2025-06-04 08:42:12] VERSION_ID="7"
[2025-06-04 08:42:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 08:42:12] ANSI_COLOR="0;31"
[2025-06-04 08:42:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 08:42:12] HOME_URL="https://www.centos.org/"
[2025-06-04 08:42:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 08:42:12] 
[2025-06-04 08:42:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 08:42:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 08:42:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 08:42:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 08:42:12] 
[2025-06-04 08:42:12] 2025-06-04 06:40:29,620 | INFO     | **************************************
[2025-06-04 08:42:12] 2025-06-04 06:40:30,123 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-06-04 08:42:12] 2025-06-04 06:40:30,148 | INFO     | sufficient remaining disk space (3236924751872 B)
[2025-06-04 08:42:12] 2025-06-04 06:40:30,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 08:42:12] 2025-06-04 06:40:30,148 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 08:42:12] 2025-06-04 06:40:30,148 | INFO     | update_server=False
[2025-06-04 08:42:12] 2025-06-04 06:40:30,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 08:42:12] 2025-06-04 06:40:30,553 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:42:12] 2025-06-04 06:40:30,553 | INFO     | aborting loop
[2025-06-04 08:42:12] 2025-06-04 06:40:30,631 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 08:42:12] 2025-06-04 06:40:30,631 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 08:42:12] 2025-06-04 06:40:30,631 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 08:42:12] 2025-06-04 06:40:30,761 | INFO     | all data control threads have been joined
[2025-06-04 08:42:12] 2025-06-04 06:40:30,800 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 08:42:12] 2025-06-04 06:40:31,154 | INFO     | [job] retrieve thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:31,373 | INFO     | all payload control threads have been joined
[2025-06-04 08:42:12] 2025-06-04 06:40:31,415 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 08:42:12] 2025-06-04 06:40:31,457 | INFO     | [data] copytool_in thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:31,493 | INFO     | [payload] validate_post thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:31,545 | INFO     | all job control threads have been joined
[2025-06-04 08:42:12] 2025-06-04 06:40:31,558 | INFO     | [job] job monitor thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:31,614 | INFO     | [job] validate thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:31,668 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:31,762 | INFO     | [data] control thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:32,020 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:32,065 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:32,314 | INFO     | [payload] failed_post thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:32,379 | INFO     | [payload] control thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:32,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 08:42:12] 2025-06-04 06:40:32,550 | INFO     | [job] control thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:32,806 | INFO     | [data] copytool_out thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:33,428 | INFO     | [job] queue monitor thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:35,421 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:40,950 | INFO     | job.realtimelogging is not enabled
[2025-06-04 08:42:12] 2025-06-04 06:40:41,955 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 08:42:12] 2025-06-04 06:40:42,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23300382492480)>', '<ExcThread(monitor, started 23300140918528)>']
[2025-06-04 08:42:12] 2025-06-04 06:40:42,691 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 08:42:12] 2025-06-04 06:40:42,691 | INFO     | [monitor] control thread has ended
[2025-06-04 08:42:12] 2025-06-04 06:40:47,162 | INFO     | all workflow threads have been joined
[2025-06-04 08:42:12] 2025-06-04 06:40:47,162 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 08:42:12] 2025-06-04 06:40:47,163 | INFO     | traces error code: 0
[2025-06-04 08:42:12] 2025-06-04 06:40:47,163 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 08:42:12] 2025-06-04 06:40:47,367 [wrapper] ==== pilot stdout END ====
[2025-06-04 08:42:12] 2025-06-04 06:40:47,371 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 08:42:12] 2025-06-04 06:40:47,376 [wrapper] pilotpid: 3947066
[2025-06-04 08:42:12] 2025-06-04 06:40:47,380 [wrapper] Pilot exit status: 0
[2025-06-04 08:42:12] 2025-06-04 06:40:47,394 [wrapper] pandaids: 6677382057
[2025-06-04 08:42:12] 2025-06-04 06:40:47,529 [wrapper] cleanup supervisor_pilot  221048 3947067
[2025-06-04 08:42:12] 2025-06-04 06:40:47,534 [wrapper] Test setup, not cleaning
[2025-06-04 08:42:12] 2025-06-04 06:40:47,538 [wrapper] apfmon messages muted
[2025-06-04 08:42:12] 2025-06-04 06:40:47,541 [wrapper] ==== wrapper stdout END ====
[2025-06-04 08:42:12] 2025-06-04 06:40:47,545 [wrapper] ==== wrapper stderr END ====
[2025-06-04 08:42:12]  *** Error codes and diagnostics ***
[2025-06-04 08:42:12]     "exeErrorCode": 0,
[2025-06-04 08:42:12]     "exeErrorDiag": "",
[2025-06-04 08:42:12]     "pilotErrorCode": 0,
[2025-06-04 08:42:12]     "pilotErrorDiag": "",
[2025-06-04 08:42:12]  *** Listing of results directory ***
[2025-06-04 08:42:12] total 386788
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-04 08:42:12] -rwx------ 1 boinc boinc     37140 Jun  2 18:02 runpilot2-wrapper.sh
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc       100 Jun  4 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 08:42:12] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 06:36 run_atlas
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc       105 Jun  4 06:36 job.xml
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc      6686 Jun  4 06:36 init_data.xml
[2025-06-04 08:42:12] -rw-r--r-- 2 boinc boinc 212851477 Jun  4 06:36 EVNT.45006593._000113.pool.root.1
[2025-06-04 08:42:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:36 start_atlas.sh
[2025-06-04 08:42:12] drwxrwx--x 2 boinc boinc      4096 Jun  4 06:36 shared
[2025-06-04 08:42:12] -rw-r--r-- 2 boinc boinc    508874 Jun  4 06:36 input.tar.gz
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc         0 Jun  4 06:36 boinc_lockfile
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc      2522 Jun  4 06:36 pandaJob.out
[2025-06-04 08:42:12] -rw------- 1 boinc boinc    986745 Jun  4 06:36 agis_schedconf.cvmfs.json
[2025-06-04 08:42:12] -rw------- 1 boinc boinc   1603667 Jun  4 06:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 08:42:12] drwx------ 4 boinc boinc      4096 Jun  4 06:36 pilot3
[2025-06-04 08:42:12] -rw------- 1 boinc boinc 177457592 Jun  4 08:39 HITS.45006595._002807.pool.root.1
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc       528 Jun  4 08:39 boinc_task_state.xml
[2025-06-04 08:42:12] -rw------- 1 boinc boinc        95 Jun  4 08:39 pilot_heartbeat.json
[2025-06-04 08:42:12] -rw------- 1 boinc boinc      1029 Jun  4 08:40 memory_monitor_summary.json
[2025-06-04 08:42:12] -rw------- 1 boinc boinc    261042 Jun  4 08:40 log.45006595._002807.job.log.tgz.1
[2025-06-04 08:42:12] -rw------- 1 boinc boinc      7700 Jun  4 08:40 heartbeat.json
[2025-06-04 08:42:12] -rw------- 1 boinc boinc      4437 Jun  4 08:40 pilotlog.txt
[2025-06-04 08:42:12] -rw------- 1 boinc boinc    704030 Jun  4 08:40 log.45006595._002807.job.log.1
[2025-06-04 08:42:12] -rw------- 1 boinc boinc       357 Jun  4 08:40 output.list
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc       620 Jun  4 08:40 runtime_log
[2025-06-04 08:42:12] -rw------- 1 boinc boinc    983040 Jun  4 08:40 result.tar.gz
[2025-06-04 08:42:12] -rw------- 1 boinc boinc       663 Jun  4 08:40 tSqKDmpnMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlFfKDmSFjBQm.diag
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc      9040 Jun  4 08:40 runtime_log.err
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc      8192 Jun  4 08:42 boinc_mmap_file
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc        26 Jun  4 08:42 wrapper_checkpoint.txt
[2025-06-04 08:42:12] -rw-r--r-- 1 boinc boinc     20937 Jun  4 08:42 stderr.txt
[2025-06-04 08:42:12] HITS file was successfully produced:
[2025-06-04 08:42:12] -rw------- 1 boinc boinc 177457592 Jun  4 08:39 shared/HITS.pool.root.1
[2025-06-04 08:42:12]  *** Contents of shared directory: ***
[2025-06-04 08:42:12] total 382648
[2025-06-04 08:42:12] -rw-r--r-- 2 boinc boinc 212851477 Jun  4 06:36 ATLAS.root_0
[2025-06-04 08:42:12] -rw-r--r-- 2 boinc boinc     15093 Jun  4 06:36 start_atlas.sh
[2025-06-04 08:42:12] -rw-r--r-- 2 boinc boinc    508874 Jun  4 06:36 input.tar.gz
[2025-06-04 08:42:12] -rw------- 1 boinc boinc 177457592 Jun  4 08:39 HITS.pool.root.1
[2025-06-04 08:42:12] -rw------- 1 boinc boinc    983040 Jun  4 08:40 result.tar.gz
08:42:14 (3943152): run_atlas exited; CPU time 28472.555340
08:42:14 (3943152): called boinc_finish(0)

</stderr_txt>
]]>

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