Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:05:08 (5102): wrapper (7.7.26015): starting
01:05:08 (5102): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:05:08] Arguments: --nthreads 8
[2025-06-03 01:05:08] Threads: 8
[2025-06-03 01:05:08] Checking for CVMFS
[2025-06-03 01:05:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:05:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:05:09] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:05:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:05:10] 2.11.2.0 8450 30977 94696 146722 0 59 24359769 25165825 4635 130560 0 16099490 99.778 18484681 1940 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 01:05:10] CVMFS is ok
[2025-06-03 01:05:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:05:10] Checking for apptainer binary...
[2025-06-03 01:05:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:05:10] Running /usr/bin/apptainer --version
[2025-06-03 01:05:10] apptainer version 1.3.2-1.el7
[2025-06-03 01:05:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:35:45] cg-vwn262.simple-grid.lan
[2025-06-03 01:35:45] apptainer works
[2025-06-03 01:35:45] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:35:45] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:35:45] Starting ATLAS job with PandaID=6677385817
[2025-06-03 01:35:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 05:42:03]  *** The last 200 lines of the pilot log: ***
[2025-06-03 05:42:03] 2025-06-03 03:29:57,771 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 05:42:03] 2025-06-03 03:29:57,771 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 05:42:03] 2025-06-03 03:29:57,771 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 05:42:03] 2025-06-03 03:29:57,776 | INFO     | fitting pss+swap vs Time
[2025-06-03 05:42:03] 2025-06-03 03:29:57,777 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,782 | INFO     | sum of deviations: 85372243902.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,782 | INFO     | mean x: 1748914659.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,782 | INFO     | mean y: 2409921.8341013826
[2025-06-03 05:42:03] 2025-06-03 03:29:57,783 | INFO     | -- intersect: -47121021991.27811
[2025-06-03 05:42:03] 2025-06-03 03:29:57,783 | INFO     | intersect: -47121021991.27811
[2025-06-03 05:42:03] 2025-06-03 03:29:57,783 | INFO     | chi2: 6.220222461844056
[2025-06-03 05:42:03] 2025-06-03 03:29:57,784 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,785 | INFO     | sum of deviations: 97919784569.99998
[2025-06-03 05:42:03] 2025-06-03 03:29:57,786 | INFO     | mean x: 1748914506.5
[2025-06-03 05:42:03] 2025-06-03 03:29:57,786 | INFO     | mean y: 2418665.7264150945
[2025-06-03 05:42:03] 2025-06-03 03:29:57,786 | INFO     | -- intersect: -57962160312.19536
[2025-06-03 05:42:03] 2025-06-03 03:29:57,786 | INFO     | intersect: -57962160312.19536
[2025-06-03 05:42:03] 2025-06-03 03:29:57,786 | INFO     | chi2: 5.4453655991775065
[2025-06-03 05:42:03] 2025-06-03 03:29:57,786 | INFO     | current chi2=5.4453655991775065 (change=12.457060296792575 %)
[2025-06-03 05:42:03] 2025-06-03 03:29:57,786 | INFO     | right removable region: 211
[2025-06-03 05:42:03] 2025-06-03 03:29:57,787 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,788 | INFO     | sum of deviations: 11982716048.000002
[2025-06-03 05:42:03] 2025-06-03 03:29:57,788 | INFO     | mean x: 1748914811.5
[2025-06-03 05:42:03] 2025-06-03 03:29:57,788 | INFO     | mean y: 2462162.5754716983
[2025-06-03 05:42:03] 2025-06-03 03:29:57,789 | INFO     | -- intersect: -7090825623.071957
[2025-06-03 05:42:03] 2025-06-03 03:29:57,789 | INFO     | intersect: -7090825623.071957
[2025-06-03 05:42:03] 2025-06-03 03:29:57,789 | INFO     | chi2: 1.5836000141938253
[2025-06-03 05:42:03] 2025-06-03 03:29:57,789 | INFO     | current chi2=1.5836000141938253 (change=74.5411032497968 %)
[2025-06-03 05:42:03] 2025-06-03 03:29:57,790 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,791 | INFO     | sum of deviations: -11599254737.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,792 | INFO     | mean x: 1748914964.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,792 | INFO     | mean y: 2479603.468599034
[2025-06-03 05:42:03] 2025-06-03 03:29:57,792 | INFO     | -- intersect: 7378454928.481476
[2025-06-03 05:42:03] 2025-06-03 03:29:57,792 | INFO     | intersect: 7378454928.481476
[2025-06-03 05:42:03] 2025-06-03 03:29:57,792 | INFO     | chi2: 0.8860445207960894
[2025-06-03 05:42:03] 2025-06-03 03:29:57,792 | INFO     | current chi2=0.8860445207960894 (change=44.04871729890994 %)
[2025-06-03 05:42:03] 2025-06-03 03:29:57,793 | INFO     | sum of square deviations: 2555770710.5
[2025-06-03 05:42:03] 2025-06-03 03:29:57,794 | INFO     | sum of deviations: -6416997510.5
[2025-06-03 05:42:03] 2025-06-03 03:29:57,795 | INFO     | mean x: 1748915116.5
[2025-06-03 05:42:03] 2025-06-03 03:29:57,795 | INFO     | mean y: 2475563.826732673
[2025-06-03 05:42:03] 2025-06-03 03:29:57,795 | INFO     | -- intersect: 4393630021.677429
[2025-06-03 05:42:03] 2025-06-03 03:29:57,795 | INFO     | intersect: 4393630021.677429
[2025-06-03 05:42:03] 2025-06-03 03:29:57,795 | INFO     | chi2: 0.8544611512291249
[2025-06-03 05:42:03] 2025-06-03 03:29:57,796 | INFO     | current chi2=0.8544611512291249 (change=3.5645352830112436 %)
[2025-06-03 05:42:03] 2025-06-03 03:29:57,796 | INFO     | left removable region: 30
[2025-06-03 05:42:03] 2025-06-03 03:29:57,796 | INFO     | sum of square deviations: 1838657730.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,797 | INFO     | sum of deviations: 4241360134.0000005
[2025-06-03 05:42:03] 2025-06-03 03:29:57,798 | INFO     | mean x: 1748915391.0
[2025-06-03 05:42:03] 2025-06-03 03:29:57,798 | INFO     | mean y: 2489320.5635359115
[2025-06-03 05:42:03] 2025-06-03 03:29:57,798 | INFO     | -- intersect: -4031855895.566725
[2025-06-03 05:42:03] 2025-06-03 03:29:57,798 | INFO     | intersect: -4031855895.566725
[2025-06-03 05:42:03] 2025-06-03 03:29:57,798 | INFO     | chi2: 0.0007875674347441914
[2025-06-03 05:42:03] 2025-06-03 03:29:57,798 | INFO     | -- intersect: -4031855895.566725
[2025-06-03 05:42:03] 2025-06-03 03:29:57,799 | INFO     | current memory leak: 2.31 B/s (using 181 data points, chi2=0.00)
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | ..............................
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | . Timing measurements:
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | . get job = 0 s
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | . initial setup = 10 s
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | . payload setup = 174 s
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | . stage-in = 0 s
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | . payload execution = 13388 s
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | . stage-out = 3 s
[2025-06-03 05:42:03] 2025-06-03 03:29:57,800 | INFO     | . log creation = 1 s
[2025-06-03 05:42:03] 2025-06-03 03:29:57,801 | INFO     | ..............................
[2025-06-03 05:42:03] 2025-06-03 03:29:58,388 | INFO     | 
[2025-06-03 05:42:03] 2025-06-03 03:29:58,388 | INFO     | job summary report
[2025-06-03 05:42:03] 2025-06-03 03:29:58,388 | INFO     | --------------------------------------------------
[2025-06-03 05:42:03] 2025-06-03 03:29:58,388 | INFO     | PanDA job id: 6677385817
[2025-06-03 05:42:03] 2025-06-03 03:29:58,388 | INFO     | task id: 45006595
[2025-06-03 05:42:03] 2025-06-03 03:29:58,388 | INFO     | errors: (none)
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | pilot state: finished 
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | transexitcode: 0
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | exeerrorcode: 0
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | exeerrordiag: 
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | exitcode: 0
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | exitmsg: OK
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | cpuconsumptiontime: 50007 s
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | nevents: 400
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | neventsw: 0
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | pid: 1214
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | pgrp: 1214
[2025-06-03 05:42:03] 2025-06-03 03:29:58,389 | INFO     | corecount: 8
[2025-06-03 05:42:03] 2025-06-03 03:29:58,390 | INFO     | event service: False
[2025-06-03 05:42:03] 2025-06-03 03:29:58,390 | INFO     | sizes: {0: 2404349, 1: 2405035, 2: 2405234, 13: 2405234, 24: 2405290, 34: 2405318, 45: 2405474, 56: 2405502, 66: 2405530, 77: 2405558, 88: 2405614, 96: 2406128, 99
[2025-06-03 05:42:03] 2025-06-03 03:29:58,390 | INFO     | --------------------------------------------------
[2025-06-03 05:42:03] 2025-06-03 03:29:58,390 | INFO     | 
[2025-06-03 05:42:03] 2025-06-03 03:29:58,390 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-06-03 05:42:03] 2025-06-03 03:29:58,877 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,878 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,878 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,878 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,878 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,878 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,878 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,878 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,878 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,879 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 05:42:03] 2025-06-03 03:29:58,880 | INFO     | job 6677385817 has completed (purged errors)
[2025-06-03 05:42:03] 2025-06-03 03:29:58,880 | INFO     | overall cleanup function is called
[2025-06-03 05:42:03] 2025-06-03 03:29:59,889 | INFO     | --- collectZombieJob: --- 10, [1214]
[2025-06-03 05:42:03] 2025-06-03 03:29:59,889 | INFO     | zombie collector waiting for pid 1214
[2025-06-03 05:42:03] 2025-06-03 03:29:59,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 05:42:03] 2025-06-03 03:29:59,889 | INFO     | collected zombie processes
[2025-06-03 05:42:03] 2025-06-03 03:29:59,890 | INFO     | will attempt to kill all subprocesses of pid=1214
[2025-06-03 05:42:03] 2025-06-03 03:30:00,016 | INFO     | process IDs to be killed: [1214] (in reverse order)
[2025-06-03 05:42:03] 2025-06-03 03:30:01,145 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 05:42:03] 2025-06-03 03:30:01,146 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 05:42:03] 2025-06-03 03:30:01,149 | INFO     | did not find any defunct processes belonging to 1214
[2025-06-03 05:42:03] 2025-06-03 03:30:01,152 | INFO     | did not find any defunct processes belonging to 1214
[2025-06-03 05:42:03] 2025-06-03 03:30:01,152 | INFO     | ready for new job
[2025-06-03 05:42:03] 2025-06-03 03:30:01,152 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 05:42:03] 2025-06-03 03:30:01,154 | INFO     | **************************************
[2025-06-03 05:42:03] 2025-06-03 03:30:01,154 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 05:42:03] 2025-06-03 03:30:01,154 | INFO     | **************************************
[2025-06-03 05:42:03] 2025-06-03 03:30:01,154 | INFO     | 
[2025-06-03 05:42:03] 2025-06-03 03:30:01,155 | INFO     | pilot is running in a VM
[2025-06-03 05:42:03] 2025-06-03 03:30:01,155 | INFO     | architecture information:
[2025-06-03 05:42:03] 2025-06-03 03:30:01,173 | INFO     | executing command: cat /etc/os-release
[2025-06-03 05:42:03] 2025-06-03 03:30:01,473 | INFO     | cat /etc/os-release:
[2025-06-03 05:42:03] NAME="CentOS Linux"
[2025-06-03 05:42:03] VERSION="7 (Core)"
[2025-06-03 05:42:03] ID="centos"
[2025-06-03 05:42:03] ID_LIKE="rhel fedora"
[2025-06-03 05:42:03] VERSION_ID="7"
[2025-06-03 05:42:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 05:42:03] ANSI_COLOR="0;31"
[2025-06-03 05:42:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 05:42:03] HOME_URL="https://www.centos.org/"
[2025-06-03 05:42:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 05:42:03] 
[2025-06-03 05:42:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 05:42:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 05:42:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 05:42:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 05:42:03] 
[2025-06-03 05:42:03] 2025-06-03 03:30:01,474 | INFO     | **************************************
[2025-06-03 05:42:03] 2025-06-03 03:30:01,977 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-06-03 05:42:03] 2025-06-03 03:30:02,179 | INFO     | sufficient remaining disk space (496762880000 B)
[2025-06-03 05:42:03] 2025-06-03 03:30:02,179 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 05:42:03] 2025-06-03 03:30:02,180 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 05:42:03] 2025-06-03 03:30:02,180 | INFO     | update_server=False
[2025-06-03 05:42:03] 2025-06-03 03:30:02,180 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 05:42:03] 2025-06-03 03:30:02,181 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 05:42:03] 2025-06-03 03:30:02,181 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 05:42:03] 2025-06-03 03:30:02,182 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 05:42:03] 2025-06-03 03:30:02,182 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 05:42:03] 2025-06-03 03:30:02,182 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 05:42:03] 2025-06-03 03:30:02,324 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 05:42:03] 2025-06-03 03:30:02,324 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 05:42:03] 2025-06-03 03:30:02,324 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:42:03] 2025-06-03 03:30:02,324 | INFO     | will abort loop
[2025-06-03 05:42:03] 2025-06-03 03:30:02,688 | INFO     | all job control threads have been joined
[2025-06-03 05:42:03] 2025-06-03 03:30:02,909 | INFO     | all data control threads have been joined
[2025-06-03 05:42:03] 2025-06-03 03:30:02,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 05:42:03] 2025-06-03 03:30:03,186 | INFO     | [job] retrieve thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,188 | INFO     | [payload] failed_post thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,197 | INFO     | all payload control threads have been joined
[2025-06-03 05:42:03] 2025-06-03 03:30:03,331 | INFO     | [job] job monitor thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,367 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,456 | INFO     | [payload] validate_post thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,694 | INFO     | [job] control thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,800 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,800 | INFO     | [data] copytool_in thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,819 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,915 | INFO     | [data] control thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,931 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:03,964 | INFO     | [job] queue monitor thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:04,188 | INFO     | [data] copytool_out thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:04,203 | INFO     | [payload] control thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:04,434 | INFO     | [job] validate thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:04,957 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 05:42:03] 2025-06-03 03:30:08,966 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 05:42:03] 2025-06-03 03:30:10,161 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639374481216)>', '<ExcThread(monitor, started 139639067219712)>']
[2025-06-03 05:42:03] 2025-06-03 03:30:10,230 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 05:42:03] 2025-06-03 03:30:10,230 | INFO     | [monitor] control thread has ended
[2025-06-03 05:42:03] 2025-06-03 03:30:15,186 | INFO     | all workflow threads have been joined
[2025-06-03 05:42:03] 2025-06-03 03:30:15,186 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 05:42:03] 2025-06-03 03:30:15,186 | INFO     | traces error code: 0
[2025-06-03 05:42:03] 2025-06-03 03:30:15,187 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 05:42:03] 2025-06-03 03:30:15,544 [wrapper] ==== pilot stdout END ====
[2025-06-03 05:42:03] 2025-06-03 03:30:15,635 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 05:42:03] 2025-06-03 03:30:15,718 [wrapper] pilotpid: 26983
[2025-06-03 05:42:03] 2025-06-03 03:30:15,841 [wrapper] Pilot exit status: 0
[2025-06-03 05:42:03] 2025-06-03 03:30:16,439 [wrapper] pandaids: 6677385817
[2025-06-03 05:42:03] 2025-06-03 03:30:17,279 [wrapper] cleanup supervisor_pilot  9610 26984
[2025-06-03 05:42:03] 2025-06-03 03:30:17,374 [wrapper] Test setup, not cleaning
[2025-06-03 05:42:03] 2025-06-03 03:30:17,500 [wrapper] apfmon messages muted
[2025-06-03 05:42:03] 2025-06-03 03:30:17,594 [wrapper] ==== wrapper stdout END ====
[2025-06-03 05:42:03] 2025-06-03 03:30:17,668 [wrapper] ==== wrapper stderr END ====
[2025-06-03 05:42:03]  *** Error codes and diagnostics ***
[2025-06-03 05:42:03]     "exeErrorCode": 0,
[2025-06-03 05:42:03]     "exeErrorDiag": "",
[2025-06-03 05:42:03]     "pilotErrorCode": 0,
[2025-06-03 05:42:03]     "pilotErrorDiag": "",
[2025-06-03 05:42:03]  *** Listing of results directory ***
[2025-06-03 05:42:03] total 392384
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:57 queuedata.json
[2025-06-03 05:42:03] -rwx------. 1 boinc boinc     37140 Jun  2 18:58 runpilot2-wrapper.sh
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc       100 Jun  3 01:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 05:42:03] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 01:05 run_atlas
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc       105 Jun  3 01:05 job.xml
[2025-06-03 05:42:03] -rw-r--r--. 2 boinc boinc 216610466 Jun  3 01:05 EVNT.45006593._000185.pool.root.1
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc      6392 Jun  3 01:05 init_data.xml
[2025-06-03 05:42:03] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:05 start_atlas.sh
[2025-06-03 05:42:03] drwxrwx--x. 2 boinc boinc        68 Jun  3 01:05 shared
[2025-06-03 05:42:03] -rw-r--r--. 2 boinc boinc    508873 Jun  3 01:05 input.tar.gz
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc         0 Jun  3 01:05 boinc_lockfile
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc      2521 Jun  3 01:35 pandaJob.out
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc    988091 Jun  3 01:39 agis_schedconf.cvmfs.json
[2025-06-03 05:42:03] drwx------. 4 boinc boinc      4096 Jun  3 01:39 pilot3
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc 178225705 Jun  3 05:27 HITS.45006595._004624.pool.root.1
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc       531 Jun  3 05:27 boinc_task_state.xml
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc      1014 Jun  3 05:28 memory_monitor_summary.json
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc   1603667 Jun  3 05:28 agis_ddmendpoints.agis.ALL.json
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc    391675 Jun  3 05:28 log.45006595._004624.job.log.tgz.1
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc        95 Jun  3 05:29 pilot_heartbeat.json
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc      7685 Jun  3 05:29 heartbeat.json
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc      4726 Jun  3 05:30 pilotlog.txt
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc   1177536 Jun  3 05:30 log.45006595._004624.job.log.1
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc       357 Jun  3 05:30 output.list
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc       620 Jun  3 05:30 runtime_log
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc   1587200 Jun  3 05:30 result.tar.gz
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc      8673 Jun  3 05:30 runtime_log.err
[2025-06-03 05:42:03] -rw-------. 1 boinc boinc       656 Jun  3 05:30 I3YLDmsfNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkafKDmzK1HLo.diag
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc      8192 Jun  3 05:42 boinc_mmap_file
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc        28 Jun  3 05:42 wrapper_checkpoint.txt
[2025-06-03 05:42:03] -rw-r--r--. 1 boinc boinc     20525 Jun  3 05:42 stderr.txt
[2025-06-03 05:42:04] HITS file was successfully produced:
[2025-06-03 05:42:04] -rw-------. 1 boinc boinc 178225705 Jun  3 05:27 shared/HITS.pool.root.1
[2025-06-03 05:42:04]  *** Contents of shared directory: ***
[2025-06-03 05:42:04] total 387656
[2025-06-03 05:42:04] -rw-r--r--. 2 boinc boinc 216610466 Jun  3 01:05 ATLAS.root_0
[2025-06-03 05:42:04] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:05 start_atlas.sh
[2025-06-03 05:42:04] -rw-r--r--. 2 boinc boinc    508873 Jun  3 01:05 input.tar.gz
[2025-06-03 05:42:04] -rw-------. 1 boinc boinc 178225705 Jun  3 05:27 HITS.pool.root.1
[2025-06-03 05:42:04] -rw-------. 1 boinc boinc   1587200 Jun  3 05:30 result.tar.gz
05:42:05 (5102): run_atlas exited; CPU time 50198.176357
05:42:05 (5102): called boinc_finish(0)

</stderr_txt>
]]>

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