Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:34:54 (27116): wrapper (7.7.26015): starting
05:34:54 (27116): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 05:34:54] Arguments: --nthreads 8
[2025-06-03 05:34:54] Threads: 8
[2025-06-03 05:34:54] Checking for CVMFS
[2025-06-03 05:34:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 05:34:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 05:34:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:34:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:34:56] 2.11.2.0 13438 31244 100784 146724 2 60 18152152 25165825 4636 130560 0 15595497 99.800 17729647 1986 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 05:34:56] CVMFS is ok
[2025-06-03 05:34:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:34:56] Checking for apptainer binary...
[2025-06-03 05:34:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:34:56] Running /usr/bin/apptainer --version
[2025-06-03 05:34:56] apptainer version 1.3.2-1.el7
[2025-06-03 05:34:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 06:05:21] cg-vwn353.simple-grid.lan
[2025-06-03 06:05:21] apptainer works
[2025-06-03 06:05:21] Set ATHENA_PROC_NUMBER=8
[2025-06-03 06:05:21] Set ATHENA_CORE_NUMBER=8
[2025-06-03 06:05:21] Starting ATLAS job with PandaID=6677384495
[2025-06-03 06:05:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:11:05]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:11:05] 2025-06-03 07:45:49,374 | INFO     | extracted standard info from prmon json
[2025-06-03 10:11:05] 2025-06-03 07:45:49,374 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 10:11:05] 2025-06-03 07:45:49,375 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:11:05] 2025-06-03 07:45:49,375 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:11:05] 2025-06-03 07:45:49,375 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:11:05] 2025-06-03 07:45:49,380 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:11:05] 2025-06-03 07:45:49,380 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,382 | INFO     | sum of deviations: 23627751864.499985
[2025-06-03 10:11:05] 2025-06-03 07:45:49,382 | INFO     | mean x: 1748930438.5
[2025-06-03 10:11:05] 2025-06-03 07:45:49,382 | INFO     | mean y: 2561928.06372549
[2025-06-03 10:11:05] 2025-06-03 07:45:49,383 | INFO     | -- intersect: -15695153334.496794
[2025-06-03 10:11:05] 2025-06-03 07:45:49,383 | INFO     | intersect: -15695153334.496794
[2025-06-03 10:11:05] 2025-06-03 07:45:49,387 | INFO     | chi2: 7.392033685661483
[2025-06-03 10:11:05] 2025-06-03 07:45:49,388 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,390 | INFO     | sum of deviations: 39631204618.99998
[2025-06-03 10:11:05] 2025-06-03 07:45:49,390 | INFO     | mean x: 1748930286.0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,390 | INFO     | mean y: 2574636.1557788947
[2025-06-03 10:11:05] 2025-06-03 07:45:49,390 | INFO     | -- intersect: -28362444791.61763
[2025-06-03 10:11:05] 2025-06-03 07:45:49,390 | INFO     | intersect: -28362444791.61763
[2025-06-03 10:11:05] 2025-06-03 07:45:49,390 | INFO     | chi2: 6.681053947654236
[2025-06-03 10:11:05] 2025-06-03 07:45:49,390 | INFO     | current chi2=6.681053947654236 (change=9.618188555963322 %)
[2025-06-03 10:11:05] 2025-06-03 07:45:49,391 | INFO     | right removable region: 198
[2025-06-03 10:11:05] 2025-06-03 07:45:49,391 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,392 | INFO     | sum of deviations: -50936635532.00001
[2025-06-03 10:11:05] 2025-06-03 07:45:49,393 | INFO     | mean x: 1748930591.0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,393 | INFO     | mean y: 2622086.527638191
[2025-06-03 10:11:05] 2025-06-03 07:45:49,393 | INFO     | -- intersect: 36459220423.76789
[2025-06-03 10:11:05] 2025-06-03 07:45:49,393 | INFO     | intersect: 36459220423.76789
[2025-06-03 10:11:05] 2025-06-03 07:45:49,393 | INFO     | chi2: 2.3787523672371558
[2025-06-03 10:11:05] 2025-06-03 07:45:49,393 | INFO     | current chi2=2.3787523672371558 (change=67.82005509726933 %)
[2025-06-03 10:11:05] 2025-06-03 07:45:49,394 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 10:11:05] 2025-06-03 07:45:49,395 | INFO     | sum of deviations: -85677473628.00003
[2025-06-03 10:11:05] 2025-06-03 07:45:49,396 | INFO     | mean x: 1748930743.5
[2025-06-03 10:11:05] 2025-06-03 07:45:49,396 | INFO     | mean y: 2651378.443298969
[2025-06-03 10:11:05] 2025-06-03 07:45:49,396 | INFO     | -- intersect: 66188812124.122826
[2025-06-03 10:11:05] 2025-06-03 07:45:49,396 | INFO     | intersect: 66188812124.122826
[2025-06-03 10:11:05] 2025-06-03 07:45:49,396 | INFO     | chi2: 0.9984912150608309
[2025-06-03 10:11:05] 2025-06-03 07:45:49,397 | INFO     | current chi2=0.9984912150608309 (change=58.02458344074939 %)
[2025-06-03 10:11:05] 2025-06-03 07:45:49,397 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,406 | INFO     | sum of deviations: -86295607367.99998
[2025-06-03 10:11:05] 2025-06-03 07:45:49,407 | INFO     | mean x: 1748930896.0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,407 | INFO     | mean y: 2651891.8253968256
[2025-06-03 10:11:05] 2025-06-03 07:45:49,407 | INFO     | -- intersect: 72098401430.79869
[2025-06-03 10:11:05] 2025-06-03 07:45:49,407 | INFO     | intersect: 72098401430.79869
[2025-06-03 10:11:05] 2025-06-03 07:45:49,408 | INFO     | chi2: 0.9559767353532865
[2025-06-03 10:11:05] 2025-06-03 07:45:49,408 | INFO     | current chi2=0.9559767353532865 (change=4.2578721841788365 %)
[2025-06-03 10:11:05] 2025-06-03 07:45:49,408 | INFO     | left removable region: 30
[2025-06-03 10:11:05] 2025-06-03 07:45:49,408 | INFO     | sum of square deviations: 1470248962.0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,409 | INFO     | sum of deviations: -60482752421.50001
[2025-06-03 10:11:05] 2025-06-03 07:45:49,409 | INFO     | mean x: 1748931170.5
[2025-06-03 10:11:05] 2025-06-03 07:45:49,410 | INFO     | mean y: 2661075.386904762
[2025-06-03 10:11:05] 2025-06-03 07:45:49,410 | INFO     | -- intersect: 71949775966.52852
[2025-06-03 10:11:05] 2025-06-03 07:45:49,410 | INFO     | intersect: 71949775966.52852
[2025-06-03 10:11:05] 2025-06-03 07:45:49,410 | INFO     | chi2: 0.14449482476732925
[2025-06-03 10:11:05] 2025-06-03 07:45:49,410 | INFO     | -- intersect: 71949775966.52852
[2025-06-03 10:11:05] 2025-06-03 07:45:49,410 | INFO     | current memory leak: -41.14 B/s (using 168 data points, chi2=0.14)
[2025-06-03 10:11:05] 2025-06-03 07:45:49,411 | INFO     | ..............................
[2025-06-03 10:11:05] 2025-06-03 07:45:49,411 | INFO     | . Timing measurements:
[2025-06-03 10:11:05] 2025-06-03 07:45:49,412 | INFO     | . get job = 0 s
[2025-06-03 10:11:05] 2025-06-03 07:45:49,412 | INFO     | . initial setup = 6 s
[2025-06-03 10:11:05] 2025-06-03 07:45:49,412 | INFO     | . payload setup = 173 s
[2025-06-03 10:11:05] 2025-06-03 07:45:49,412 | INFO     | . stage-in = 0 s
[2025-06-03 10:11:05] 2025-06-03 07:45:49,412 | INFO     | . payload execution = 12554 s
[2025-06-03 10:11:05] 2025-06-03 07:45:49,412 | INFO     | . stage-out = 10 s
[2025-06-03 10:11:05] 2025-06-03 07:45:49,412 | INFO     | . log creation = 1 s
[2025-06-03 10:11:05] 2025-06-03 07:45:49,412 | INFO     | ..............................
[2025-06-03 10:11:05] 2025-06-03 07:45:49,579 | INFO     | 
[2025-06-03 10:11:05] 2025-06-03 07:45:49,579 | INFO     | job summary report
[2025-06-03 10:11:05] 2025-06-03 07:45:49,579 | INFO     | --------------------------------------------------
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | PanDA job id: 6677384495
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | task id: 45006595
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | errors: (none)
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | pilot state: finished 
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | transexitcode: 0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | exeerrorcode: 0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | exeerrordiag: 
[2025-06-03 10:11:05] 2025-06-03 07:45:49,580 | INFO     | exitcode: 0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | exitmsg: OK
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | cpuconsumptiontime: 46512 s
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | nevents: 400
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | neventsw: 0
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | pid: 26405
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | pgrp: 26405
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | corecount: 8
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | event service: False
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | sizes: {0: 2404349, 1: 2405035, 2: 2405234, 13: 2405234, 23: 2405290, 34: 2405318, 45: 2405474, 56: 2405502, 66: 2405530, 77: 2405558, 88: 2405614, 98: 2405922, 99
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | --------------------------------------------------
[2025-06-03 10:11:05] 2025-06-03 07:45:49,581 | INFO     | 
[2025-06-03 10:11:05] 2025-06-03 07:45:49,582 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-03 10:11:05] 2025-06-03 07:45:50,105 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,105 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,105 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,105 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,106 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | job 6677384495 has completed (purged errors)
[2025-06-03 10:11:05] 2025-06-03 07:45:50,107 | INFO     | overall cleanup function is called
[2025-06-03 10:11:05] 2025-06-03 07:45:51,116 | INFO     | --- collectZombieJob: --- 10, [26405]
[2025-06-03 10:11:05] 2025-06-03 07:45:51,116 | INFO     | zombie collector waiting for pid 26405
[2025-06-03 10:11:05] 2025-06-03 07:45:51,116 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:11:05] 2025-06-03 07:45:51,117 | INFO     | collected zombie processes
[2025-06-03 10:11:05] 2025-06-03 07:45:51,117 | INFO     | will attempt to kill all subprocesses of pid=26405
[2025-06-03 10:11:05] 2025-06-03 07:45:51,231 | INFO     | process IDs to be killed: [26405] (in reverse order)
[2025-06-03 10:11:05] 2025-06-03 07:45:51,959 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:11:05] 2025-06-03 07:45:51,959 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:11:05] 2025-06-03 07:45:51,970 | INFO     | did not find any defunct processes belonging to 26405
[2025-06-03 10:11:05] 2025-06-03 07:45:51,973 | INFO     | did not find any defunct processes belonging to 26405
[2025-06-03 10:11:05] 2025-06-03 07:45:51,973 | INFO     | ready for new job
[2025-06-03 10:11:05] 2025-06-03 07:45:51,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:11:05] 2025-06-03 07:45:51,975 | INFO     | **************************************
[2025-06-03 10:11:05] 2025-06-03 07:45:51,976 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:11:05] 2025-06-03 07:45:51,976 | INFO     | **************************************
[2025-06-03 10:11:05] 2025-06-03 07:45:51,976 | INFO     | 
[2025-06-03 10:11:05] 2025-06-03 07:45:51,983 | INFO     | pilot is running in a VM
[2025-06-03 10:11:05] 2025-06-03 07:45:51,983 | INFO     | architecture information:
[2025-06-03 10:11:05] 2025-06-03 07:45:51,995 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:11:05] 2025-06-03 07:45:52,286 | INFO     | cat /etc/os-release:
[2025-06-03 10:11:05] NAME="CentOS Linux"
[2025-06-03 10:11:05] VERSION="7 (Core)"
[2025-06-03 10:11:05] ID="centos"
[2025-06-03 10:11:05] ID_LIKE="rhel fedora"
[2025-06-03 10:11:05] VERSION_ID="7"
[2025-06-03 10:11:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:11:05] ANSI_COLOR="0;31"
[2025-06-03 10:11:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:11:05] HOME_URL="https://www.centos.org/"
[2025-06-03 10:11:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:11:05] 
[2025-06-03 10:11:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:11:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:11:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:11:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:11:05] 
[2025-06-03 10:11:05] 2025-06-03 07:45:52,287 | INFO     | **************************************
[2025-06-03 10:11:05] 2025-06-03 07:45:52,790 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-03 10:11:05] 2025-06-03 07:45:53,127 | INFO     | sufficient remaining disk space (496533241856 B)
[2025-06-03 10:11:05] 2025-06-03 07:45:53,127 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:11:05] 2025-06-03 07:45:53,128 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:11:05] 2025-06-03 07:45:53,128 | INFO     | update_server=False
[2025-06-03 10:11:05] 2025-06-03 07:45:53,128 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:11:05] 2025-06-03 07:45:53,129 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:11:05] 2025-06-03 07:45:53,130 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:11:05] 2025-06-03 07:45:53,130 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:11:05] 2025-06-03 07:45:53,130 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:11:05] 2025-06-03 07:45:53,177 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:11:05] 2025-06-03 07:45:53,177 | INFO     | aborting loop
[2025-06-03 10:11:05] 2025-06-03 07:45:53,620 | INFO     | all data control threads have been joined
[2025-06-03 10:11:05] 2025-06-03 07:45:53,740 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:11:05] 2025-06-03 07:45:54,134 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:54,183 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:54,210 | INFO     | all payload control threads have been joined
[2025-06-03 10:11:05] 2025-06-03 07:45:54,273 | INFO     | [job] validate thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:54,315 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:11:05] 2025-06-03 07:45:54,443 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:54,515 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:54,589 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:11:05] 2025-06-03 07:45:54,626 | INFO     | [data] control thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:54,770 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:54,804 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:54,825 | INFO     | all job control threads have been joined
[2025-06-03 10:11:05] 2025-06-03 07:45:55,216 | INFO     | [payload] control thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:55,282 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:55,542 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:55,595 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:55,675 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:55,748 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:55,831 | INFO     | [job] control thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:58,324 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:11:05] 2025-06-03 07:45:59,916 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140243895060288)>', '<ExcThread(monitor, started 140243021850368)>']
[2025-06-03 10:11:05] 2025-06-03 07:46:00,169 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:11:05] 2025-06-03 07:46:00,169 | INFO     | [monitor] control thread has ended
[2025-06-03 10:11:05] 2025-06-03 07:46:04,942 | INFO     | all workflow threads have been joined
[2025-06-03 10:11:05] 2025-06-03 07:46:04,942 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:11:05] 2025-06-03 07:46:04,943 | INFO     | traces error code: 0
[2025-06-03 10:11:05] 2025-06-03 07:46:04,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:11:05] 2025-06-03 07:46:05,334 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:11:05] 2025-06-03 07:46:05,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:11:05] 2025-06-03 07:46:05,523 [wrapper] pilotpid: 17838
[2025-06-03 10:11:05] 2025-06-03 07:46:05,594 [wrapper] Pilot exit status: 0
[2025-06-03 10:11:05] 2025-06-03 07:46:05,998 [wrapper] pandaids: 6677384495
[2025-06-03 10:11:05] 2025-06-03 07:46:06,888 [wrapper] cleanup supervisor_pilot 23978 17839
[2025-06-03 10:11:05] 2025-06-03 07:46:06,914 [wrapper] Test setup, not cleaning
[2025-06-03 10:11:05] 2025-06-03 07:46:06,947 [wrapper] apfmon messages muted
[2025-06-03 10:11:05] 2025-06-03 07:46:07,045 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:11:05] 2025-06-03 07:46:07,132 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:11:05]  *** Error codes and diagnostics ***
[2025-06-03 10:11:05]     "exeErrorCode": 0,
[2025-06-03 10:11:05]     "exeErrorDiag": "",
[2025-06-03 10:11:05]     "pilotErrorCode": 0,
[2025-06-03 10:11:05]     "pilotErrorDiag": "",
[2025-06-03 10:11:05]  *** Listing of results directory ***
[2025-06-03 10:11:05] total 387516
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 10:11:05] -rwx------. 1 boinc boinc     37140 Jun  2 18:50 runpilot2-wrapper.sh
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:50 queuedata.json
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc       100 Jun  3 05:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:11:05] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 05:34 run_atlas
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc       105 Jun  3 05:34 job.xml
[2025-06-03 10:11:05] -rw-r--r--. 2 boinc boinc 217064401 Jun  3 05:34 EVNT.45006593._000172.pool.root.1
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc      6393 Jun  3 05:34 init_data.xml
[2025-06-03 10:11:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:34 start_atlas.sh
[2025-06-03 10:11:05] drwxrwx--x. 2 boinc boinc        68 Jun  3 05:34 shared
[2025-06-03 10:11:05] -rw-r--r--. 2 boinc boinc    508874 Jun  3 05:34 input.tar.gz
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc         0 Jun  3 05:34 boinc_lockfile
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc      2521 Jun  3 06:05 pandaJob.out
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc    988073 Jun  3 06:08 agis_schedconf.cvmfs.json
[2025-06-03 10:11:05] drwx------. 4 boinc boinc      4096 Jun  3 06:08 pilot3
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc 172952289 Jun  3 09:42 HITS.45006595._004285.pool.root.1
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc       531 Jun  3 09:43 boinc_task_state.xml
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc      1015 Jun  3 09:44 memory_monitor_summary.json
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc   1603667 Jun  3 09:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc    369020 Jun  3 09:44 log.45006595._004285.job.log.tgz.1
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc        95 Jun  3 09:45 pilot_heartbeat.json
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc      7692 Jun  3 09:45 heartbeat.json
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc      4540 Jun  3 09:46 pilotlog.txt
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc   1114771 Jun  3 09:46 log.45006595._004285.job.log.1
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc       357 Jun  3 09:46 output.list
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc       620 Jun  3 09:46 runtime_log
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc   1505280 Jun  3 09:46 result.tar.gz
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc      8673 Jun  3 09:46 runtime_log.err
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc       656 Jun  3 09:46 PN7MDmzXNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmFWfKDmsGCEem.diag
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:11 boinc_mmap_file
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:11 wrapper_checkpoint.txt
[2025-06-03 10:11:05] -rw-r--r--. 1 boinc boinc     20522 Jun  3 10:11 stderr.txt
[2025-06-03 10:11:05] HITS file was successfully produced:
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc 172952289 Jun  3 09:42 shared/HITS.pool.root.1
[2025-06-03 10:11:05]  *** Contents of shared directory: ***
[2025-06-03 10:11:05] total 382868
[2025-06-03 10:11:05] -rw-r--r--. 2 boinc boinc 217064401 Jun  3 05:34 ATLAS.root_0
[2025-06-03 10:11:05] -rw-r--r--. 2 boinc boinc     15093 Jun  3 05:34 start_atlas.sh
[2025-06-03 10:11:05] -rw-r--r--. 2 boinc boinc    508874 Jun  3 05:34 input.tar.gz
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc 172952289 Jun  3 09:42 HITS.pool.root.1
[2025-06-03 10:11:05] -rw-------. 1 boinc boinc   1505280 Jun  3 09:46 result.tar.gz
10:11:07 (27116): run_atlas exited; CPU time 46684.387091
10:11:07 (27116): called boinc_finish(0)

</stderr_txt>
]]>

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