Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:03:42 (21318): wrapper (7.7.26015): starting
21:03:42 (21318): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 21:03:42] Arguments: --nthreads 8
[2025-06-02 21:03:42] Threads: 8
[2025-06-02 21:03:42] Checking for CVMFS
[2025-06-02 21:03:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 21:03:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 21:03:43] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 21:03:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 21:03:45] 2.11.2.0 20954 30865 89012 146716 3 16 16238532 25165824 4632 130560 0 15504266 99.817 16950602 1972 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 21:03:45] CVMFS is ok
[2025-06-02 21:03:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 21:03:45] Checking for apptainer binary...
[2025-06-02 21:03:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 21:03:45] Running /usr/bin/apptainer --version
[2025-06-02 21:03:45] apptainer version 1.3.2-1.el7
[2025-06-02 21:03:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 21:37:56] cg-vwn319.simple-grid.lan
[2025-06-02 21:37:56] apptainer works
[2025-06-02 21:37:56] Set ATHENA_PROC_NUMBER=8
[2025-06-02 21:37:56] Set ATHENA_CORE_NUMBER=8
[2025-06-02 21:37:56] Starting ATLAS job with PandaID=6677385846
[2025-06-02 21:37:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 02:35:53]  *** The last 200 lines of the pilot log: ***
[2025-06-03 02:35:53] 2025-06-02 23:13:19,198 | INFO     | fitting pss+swap vs Time
[2025-06-03 02:35:53] 2025-06-02 23:13:19,199 | INFO     | sum of square deviations: 2830787960.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,201 | INFO     | sum of deviations: -13163359945.999996
[2025-06-03 02:35:53] 2025-06-02 23:13:19,201 | INFO     | mean x: 1748899501.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,201 | INFO     | mean y: 2492694.043062201
[2025-06-03 02:35:53] 2025-06-02 23:13:19,201 | INFO     | -- intersect: 8134996423.161219
[2025-06-03 02:35:53] 2025-06-02 23:13:19,201 | INFO     | intersect: 8134996423.161219
[2025-06-03 02:35:53] 2025-06-02 23:13:19,202 | INFO     | chi2: 2.716909609350365
[2025-06-03 02:35:53] 2025-06-02 23:13:19,202 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,204 | INFO     | sum of deviations: 993908959.4999943
[2025-06-03 02:35:53] 2025-06-02 23:13:19,204 | INFO     | mean x: 1748899348.5
[2025-06-03 02:35:53] 2025-06-02 23:13:19,204 | INFO     | mean y: 2503373.2892156863
[2025-06-03 02:35:53] 2025-06-02 23:13:19,204 | INFO     | -- intersect: -657814315.022913
[2025-06-03 02:35:53] 2025-06-02 23:13:19,204 | INFO     | intersect: -657814315.022913
[2025-06-03 02:35:53] 2025-06-02 23:13:19,205 | INFO     | chi2: 1.9520628297785712
[2025-06-03 02:35:53] 2025-06-02 23:13:19,205 | INFO     | current chi2=1.9520628297785712 (change=28.15135170266761 %)
[2025-06-03 02:35:53] 2025-06-02 23:13:19,205 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,207 | INFO     | sum of deviations: 1117908021.000002
[2025-06-03 02:35:53] 2025-06-02 23:13:19,207 | INFO     | mean x: 1748899196.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,207 | INFO     | mean y: 2503473.3668341707
[2025-06-03 02:35:53] 2025-06-02 23:13:19,207 | INFO     | -- intersect: -797596330.6334406
[2025-06-03 02:35:53] 2025-06-02 23:13:19,207 | INFO     | intersect: -797596330.6334406
[2025-06-03 02:35:53] 2025-06-02 23:13:19,208 | INFO     | chi2: 1.9525041169780788
[2025-06-03 02:35:53] 2025-06-02 23:13:19,208 | INFO     | current chi2=1.9525041169780788 (change=-0.022606198569833005 %)
[2025-06-03 02:35:53] 2025-06-02 23:13:19,208 | INFO     | right removable region: 198
[2025-06-03 02:35:53] 2025-06-02 23:13:19,208 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,210 | INFO     | sum of deviations: -51202649883.000015
[2025-06-03 02:35:53] 2025-06-02 23:13:19,210 | INFO     | mean x: 1748899653.5
[2025-06-03 02:35:53] 2025-06-02 23:13:19,210 | INFO     | mean y: 2521689.1470588236
[2025-06-03 02:35:53] 2025-06-02 23:13:19,210 | INFO     | -- intersect: 34019743265.978195
[2025-06-03 02:35:53] 2025-06-02 23:13:19,210 | INFO     | intersect: 34019743265.978195
[2025-06-03 02:35:53] 2025-06-02 23:13:19,211 | INFO     | chi2: 0.9776795993872102
[2025-06-03 02:35:53] 2025-06-02 23:13:19,211 | INFO     | current chi2=0.9776795993872102 (change=64.0150119082916 %)
[2025-06-03 02:35:53] 2025-06-02 23:13:19,211 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,213 | INFO     | sum of deviations: -47263798631.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,213 | INFO     | mean x: 1748899806.0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,213 | INFO     | mean y: 2518476.110552764
[2025-06-03 02:35:53] 2025-06-02 23:13:19,213 | INFO     | -- intersect: 33829781990.091885
[2025-06-03 02:35:53] 2025-06-02 23:13:19,213 | INFO     | intersect: 33829781990.091885
[2025-06-03 02:35:53] 2025-06-02 23:13:19,214 | INFO     | chi2: 0.9670153456402
[2025-06-03 02:35:53] 2025-06-02 23:13:19,214 | INFO     | current chi2=0.9670153456402 (change=1.0907718391274939 %)
[2025-06-03 02:35:53] 2025-06-02 23:13:19,214 | INFO     | left removable region: 20
[2025-06-03 02:35:53] 2025-06-02 23:13:19,214 | INFO     | sum of square deviations: 1748737904.5
[2025-06-03 02:35:53] 2025-06-02 23:13:19,216 | INFO     | sum of deviations: -19144409183.499996
[2025-06-03 02:35:53] 2025-06-02 23:13:19,216 | INFO     | mean x: 1748899775.5
[2025-06-03 02:35:53] 2025-06-02 23:13:19,216 | INFO     | mean y: 2518854.5898876404
[2025-06-03 02:35:53] 2025-06-02 23:13:19,216 | INFO     | -- intersect: 19148700130.20899
[2025-06-03 02:35:53] 2025-06-02 23:13:19,216 | INFO     | intersect: 19148700130.20899
[2025-06-03 02:35:53] 2025-06-02 23:13:19,217 | INFO     | chi2: 0.13594957238722907
[2025-06-03 02:35:53] 2025-06-02 23:13:19,217 | INFO     | -- intersect: 19148700130.20899
[2025-06-03 02:35:53] 2025-06-02 23:13:19,217 | INFO     | current memory leak: -10.95 B/s (using 178 data points, chi2=0.14)
[2025-06-03 02:35:53] 2025-06-02 23:13:19,218 | INFO     | ..............................
[2025-06-03 02:35:53] 2025-06-02 23:13:19,218 | INFO     | . Timing measurements:
[2025-06-03 02:35:53] 2025-06-02 23:13:19,218 | INFO     | . get job = 0 s
[2025-06-03 02:35:53] 2025-06-02 23:13:19,218 | INFO     | . initial setup = 2 s
[2025-06-03 02:35:53] 2025-06-02 23:13:19,218 | INFO     | . payload setup = 15 s
[2025-06-03 02:35:53] 2025-06-02 23:13:19,218 | INFO     | . stage-in = 0 s
[2025-06-03 02:35:53] 2025-06-02 23:13:19,218 | INFO     | . payload execution = 12761 s
[2025-06-03 02:35:53] 2025-06-02 23:13:19,218 | INFO     | . stage-out = 3 s
[2025-06-03 02:35:53] 2025-06-02 23:13:19,219 | INFO     | . log creation = 1 s
[2025-06-03 02:35:53] 2025-06-02 23:13:19,219 | INFO     | ..............................
[2025-06-03 02:35:53] 2025-06-02 23:13:19,427 | INFO     | 
[2025-06-03 02:35:53] 2025-06-02 23:13:19,427 | INFO     | job summary report
[2025-06-03 02:35:53] 2025-06-02 23:13:19,427 | INFO     | --------------------------------------------------
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | PanDA job id: 6677385846
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | task id: 45006595
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | errors: (none)
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | pilot state: finished 
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | transexitcode: 0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | exeerrorcode: 0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | exeerrordiag: 
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | exitcode: 0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | exitmsg: OK
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | cpuconsumptiontime: 48336 s
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | nevents: 400
[2025-06-03 02:35:53] 2025-06-02 23:13:19,428 | INFO     | neventsw: 0
[2025-06-03 02:35:53] 2025-06-02 23:13:19,429 | INFO     | pid: 18097
[2025-06-03 02:35:53] 2025-06-02 23:13:19,429 | INFO     | pgrp: 18097
[2025-06-03 02:35:53] 2025-06-02 23:13:19,429 | INFO     | corecount: 8
[2025-06-03 02:35:53] 2025-06-02 23:13:19,429 | INFO     | event service: False
[2025-06-03 02:35:53] 2025-06-02 23:13:19,429 | INFO     | sizes: {0: 2405000, 1: 2405199, 2: 2405199, 10: 2405433, 12: 2405461, 12780: 2434703, 12781: 2434830, 12784: 2443827, 12787: 2443883, 12879: 2444053}
[2025-06-03 02:35:53] 2025-06-02 23:13:19,429 | INFO     | --------------------------------------------------
[2025-06-03 02:35:53] 2025-06-02 23:13:19,429 | INFO     | 
[2025-06-03 02:35:53] 2025-06-02 23:13:19,429 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 02:35:53] 2025-06-02 23:13:19,465 | INFO     | PID=9536 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 02:35:53] 2025-06-02 23:13:19,465 | INFO     | .. there are 9 such processes running
[2025-06-03 02:35:53] 2025-06-02 23:13:19,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 02:35:53] 2025-06-02 23:13:19,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 02:35:53] 2025-06-02 23:13:19,601 | INFO     | job 6677385846 has completed (purged errors)
[2025-06-03 02:35:53] 2025-06-02 23:13:19,601 | INFO     | overall cleanup function is called
[2025-06-03 02:35:53] 2025-06-02 23:13:20,611 | INFO     | --- collectZombieJob: --- 10, [18097]
[2025-06-03 02:35:53] 2025-06-02 23:13:20,611 | INFO     | zombie collector waiting for pid 18097
[2025-06-03 02:35:53] 2025-06-02 23:13:20,611 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 02:35:53] 2025-06-02 23:13:20,611 | INFO     | collected zombie processes
[2025-06-03 02:35:53] 2025-06-02 23:13:20,612 | INFO     | will attempt to kill all subprocesses of pid=18097
[2025-06-03 02:35:53] 2025-06-02 23:13:20,751 | INFO     | process IDs to be killed: [18097] (in reverse order)
[2025-06-03 02:35:53] 2025-06-02 23:13:21,528 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 02:35:53] 2025-06-02 23:13:21,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 02:35:53] 2025-06-02 23:13:21,532 | INFO     | did not find any defunct processes belonging to 18097
[2025-06-03 02:35:53] 2025-06-02 23:13:21,537 | INFO     | did not find any defunct processes belonging to 18097
[2025-06-03 02:35:53] 2025-06-02 23:13:21,538 | INFO     | ready for new job
[2025-06-03 02:35:53] 2025-06-02 23:13:21,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 02:35:53] 2025-06-02 23:13:21,540 | INFO     | **************************************
[2025-06-03 02:35:53] 2025-06-02 23:13:21,540 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 02:35:53] 2025-06-02 23:13:21,540 | INFO     | **************************************
[2025-06-03 02:35:53] 2025-06-02 23:13:21,540 | INFO     | 
[2025-06-03 02:35:53] 2025-06-02 23:13:21,541 | INFO     | pilot is running in a VM
[2025-06-03 02:35:53] 2025-06-02 23:13:21,541 | INFO     | architecture information:
[2025-06-03 02:35:53] 2025-06-02 23:13:21,542 | INFO     | executing command: cat /etc/os-release
[2025-06-03 02:35:53] 2025-06-02 23:13:21,666 | INFO     | cat /etc/os-release:
[2025-06-03 02:35:53] NAME="CentOS Linux"
[2025-06-03 02:35:53] VERSION="7 (Core)"
[2025-06-03 02:35:53] ID="centos"
[2025-06-03 02:35:53] ID_LIKE="rhel fedora"
[2025-06-03 02:35:53] VERSION_ID="7"
[2025-06-03 02:35:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 02:35:53] ANSI_COLOR="0;31"
[2025-06-03 02:35:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 02:35:53] HOME_URL="https://www.centos.org/"
[2025-06-03 02:35:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 02:35:53] 
[2025-06-03 02:35:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 02:35:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 02:35:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 02:35:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 02:35:53] 
[2025-06-03 02:35:53] 2025-06-02 23:13:21,666 | INFO     | **************************************
[2025-06-03 02:35:53] 2025-06-02 23:13:22,170 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 02:35:53] 2025-06-02 23:13:22,431 | INFO     | sufficient remaining disk space (496911777792 B)
[2025-06-03 02:35:53] 2025-06-02 23:13:22,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 02:35:53] 2025-06-02 23:13:22,431 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 02:35:53] 2025-06-02 23:13:22,431 | INFO     | update_server=False
[2025-06-03 02:35:53] 2025-06-02 23:13:22,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 02:35:53] 2025-06-02 23:13:22,436 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 02:35:53] 2025-06-02 23:13:22,436 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 02:35:53] 2025-06-02 23:13:22,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 02:35:53] 2025-06-02 23:13:22,437 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 02:35:53] 2025-06-02 23:13:22,701 | INFO     | all data control threads have been joined
[2025-06-03 02:35:53] 2025-06-02 23:13:22,914 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 02:35:53] 2025-06-02 23:13:22,914 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 02:35:53] 2025-06-02 23:13:22,915 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:35:53] 2025-06-02 23:13:22,915 | INFO     | will abort loop
[2025-06-03 02:35:53] 2025-06-02 23:13:22,937 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 02:35:53] 2025-06-02 23:13:23,351 | INFO     | all job control threads have been joined
[2025-06-03 02:35:53] 2025-06-02 23:13:23,360 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 02:35:53] 2025-06-02 23:13:23,437 | INFO     | [job] retrieve thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:23,455 | INFO     | [payload] failed_post thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:23,512 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:23,525 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:23,707 | INFO     | [data] control thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:23,793 | INFO     | all payload control threads have been joined
[2025-06-03 02:35:53] 2025-06-02 23:13:23,921 | INFO     | [job] job monitor thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:24,060 | INFO     | [job] validate thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:24,204 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:24,293 | INFO     | [data] copytool_in thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:24,357 | INFO     | [job] control thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:24,441 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 02:35:53] 2025-06-02 23:13:24,799 | INFO     | [payload] control thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:24,890 | INFO     | [payload] validate_post thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:24,945 | INFO     | [data] copytool_out thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:25,447 | INFO     | [job] queue monitor thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:27,369 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:32,720 | INFO     | job.realtimelogging is not enabled
[2025-06-03 02:35:53] 2025-06-02 23:13:33,726 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 02:35:53] 2025-06-02 23:13:34,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140334536595264)>', '<ExcThread(monitor, started 140333945968384)>']
[2025-06-03 02:35:53] 2025-06-02 23:13:34,510 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 02:35:53] 2025-06-02 23:13:34,510 | INFO     | [monitor] control thread has ended
[2025-06-03 02:35:53] 2025-06-02 23:13:39,270 | INFO     | all workflow threads have been joined
[2025-06-03 02:35:53] 2025-06-02 23:13:39,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 02:35:53] 2025-06-02 23:13:39,271 | INFO     | traces error code: 0
[2025-06-03 02:35:53] 2025-06-02 23:13:39,271 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 02:35:53] 2025-06-02 23:13:39,583 [wrapper] ==== pilot stdout END ====
[2025-06-03 02:35:53] 2025-06-02 23:13:39,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 02:35:53] 2025-06-02 23:13:39,618 [wrapper] pilotpid: 9536
[2025-06-03 02:35:53] 2025-06-02 23:13:39,624 [wrapper] Pilot exit status: 0
[2025-06-03 02:35:53] 2025-06-02 23:13:40,071 [wrapper] pandaids: 6677385846
[2025-06-03 02:35:53] 2025-06-02 23:13:41,196 [wrapper] cleanup supervisor_pilot 25617 9537
[2025-06-03 02:35:53] 2025-06-02 23:13:41,317 [wrapper] Test setup, not cleaning
[2025-06-03 02:35:53] 2025-06-02 23:13:41,429 [wrapper] apfmon messages muted
[2025-06-03 02:35:53] 2025-06-02 23:13:41,519 [wrapper] ==== wrapper stdout END ====
[2025-06-03 02:35:53] 2025-06-02 23:13:41,627 [wrapper] ==== wrapper stderr END ====
[2025-06-03 02:35:53]  *** Error codes and diagnostics ***
[2025-06-03 02:35:53]     "exeErrorCode": 0,
[2025-06-03 02:35:53]     "exeErrorDiag": "",
[2025-06-03 02:35:53]     "pilotErrorCode": 0,
[2025-06-03 02:35:53]     "pilotErrorDiag": "",
[2025-06-03 02:35:53]  *** Listing of results directory ***
[2025-06-03 02:35:53] total 388176
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:40 pilot3.tar.gz
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:57 queuedata.json
[2025-06-03 02:35:53] -rwx------. 1 boinc boinc     37140 Jun  2 18:58 runpilot2-wrapper.sh
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc       100 Jun  2 21:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 02:35:53] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 21:03 run_atlas
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc       105 Jun  2 21:03 job.xml
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc      6391 Jun  2 21:03 init_data.xml
[2025-06-03 02:35:53] -rw-r--r--. 2 boinc boinc 213458669 Jun  2 21:03 EVNT.45006593._000187.pool.root.1
[2025-06-03 02:35:53] -rw-r--r--. 2 boinc boinc     15093 Jun  2 21:03 start_atlas.sh
[2025-06-03 02:35:53] drwxrwx--x. 2 boinc boinc        68 Jun  2 21:03 shared
[2025-06-03 02:35:53] -rw-r--r--. 2 boinc boinc    508875 Jun  2 21:03 input.tar.gz
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc         0 Jun  2 21:03 boinc_lockfile
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc      2518 Jun  2 21:37 pandaJob.out
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc    988356 Jun  2 21:38 agis_schedconf.cvmfs.json
[2025-06-03 02:35:53] drwx------. 4 boinc boinc      4096 Jun  2 21:38 pilot3
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc 177255030 Jun  3 01:10 HITS.45006595._004653.pool.root.1
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc       531 Jun  3 01:10 boinc_task_state.xml
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc      1019 Jun  3 01:11 memory_monitor_summary.json
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc   1603667 Jun  3 01:11 agis_ddmendpoints.agis.ALL.json
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc    359510 Jun  3 01:11 log.45006595._004653.job.log.tgz.1
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc        95 Jun  3 01:12 pilot_heartbeat.json
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc      7685 Jun  3 01:13 heartbeat.json
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc      4797 Jun  3 01:13 pilotlog.txt
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc   1120852 Jun  3 01:13 log.45006595._004653.job.log.1
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc       357 Jun  3 01:13 output.list
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc       620 Jun  3 01:13 runtime_log
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc   1495040 Jun  3 01:13 result.tar.gz
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc      8659 Jun  3 01:13 runtime_log.err
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc       656 Jun  3 01:13 ovDLDmpfNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxrVKDmjXESAn.diag
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc      8192 Jun  3 02:35 boinc_mmap_file
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc        28 Jun  3 02:35 wrapper_checkpoint.txt
[2025-06-03 02:35:53] -rw-r--r--. 1 boinc boinc     20634 Jun  3 02:35 stderr.txt
[2025-06-03 02:35:53] HITS file was successfully produced:
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc 177255030 Jun  3 01:10 shared/HITS.pool.root.1
[2025-06-03 02:35:53]  *** Contents of shared directory: ***
[2025-06-03 02:35:53] total 383536
[2025-06-03 02:35:53] -rw-r--r--. 2 boinc boinc 213458669 Jun  2 21:03 ATLAS.root_0
[2025-06-03 02:35:53] -rw-r--r--. 2 boinc boinc     15093 Jun  2 21:03 start_atlas.sh
[2025-06-03 02:35:53] -rw-r--r--. 2 boinc boinc    508875 Jun  2 21:03 input.tar.gz
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc 177255030 Jun  3 01:10 HITS.pool.root.1
[2025-06-03 02:35:53] -rw-------. 1 boinc boinc   1495040 Jun  3 01:13 result.tar.gz
02:35:55 (21318): run_atlas exited; CPU time 48499.804552
02:35:55 (21318): called boinc_finish(0)

</stderr_txt>
]]>

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