Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:04:43 (3511431): wrapper (7.7.26015): starting
08:04:43 (3511431): wrapper: running run_atlas (--nthreads 4)
[2025-06-06 08:04:43] Arguments: --nthreads 4
[2025-06-06 08:04:43] Threads: 4
[2025-06-06 08:04:43] Checking for CVMFS
[2025-06-06 08:04:43] No cvmfs_config command found, will try listing directly
[2025-06-06 08:04:43] CVMFS is ok
[2025-06-06 08:04:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-06 08:04:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-06 08:04:43] Further information can be found at the LHC@home message board.
[2025-06-06 08:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-06 08:04:43] Checking for apptainer binary...
[2025-06-06 08:04:43] which: no apptainer in ((null))
[2025-06-06 08:04:43] apptainer is not installed, using version from CVMFS
[2025-06-06 08:04:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-06 08:04:43] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot68/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-06 08:04:43] apptainer works
[2025-06-06 08:04:43] Set ATHENA_PROC_NUMBER=4
[2025-06-06 08:04:43] Set ATHENA_CORE_NUMBER=4
[2025-06-06 08:04:43] Starting ATLAS job with PandaID=6677391064
[2025-06-06 08:04:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot68/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-06 09:36:34]  *** The last 200 lines of the pilot log: ***
[2025-06-06 09:36:34]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-06-06 09:36:34]  replicas=None
[2025-06-06 09:36:34]  scope=mc23_13p6TeV
[2025-06-06 09:36:34]  status=None
[2025-06-06 09:36:34]  status_code=0
[2025-06-06 09:36:34]  storage_token=
[2025-06-06 09:36:34]  surl=/scratch/boinc/var/slot68/slots/0/PanDA_Pilot-6677391064/log.45006595._006843.job.log.tgz.1
[2025-06-06 09:36:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/bf/log.45006595._006843.job.log.tgz.1
[2025-06-06 09:36:34]  workdir=None
[2025-06-06 09:36:34] ]
[2025-06-06 09:36:34] 2025-06-06 07:35:06,223 | INFO     | transferring file log.45006595._006843.job.log.tgz.1 from /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-6677391064/log.45006595._006843.job.log.tgz.1 to /scratch/b
[2025-06-06 09:36:34] 2025-06-06 07:35:06,223 | INFO     | executing command: /usr/bin/env mv /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-6677391064/log.45006595._006843.job.log.tgz.1 /scratch/boinc/var/slot68/slots/0/lo
[2025-06-06 09:36:34] 2025-06-06 07:35:06,246 | INFO     | adding to output.list: log.45006595._006843.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/57/bf/log.45006595._006843.job.log.tg
[2025-06-06 09:36:34] 2025-06-06 07:35:06,247 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-06-06 09:36:34] 2025-06-06 07:35:06,247 | INFO     | summary of transferred files:
[2025-06-06 09:36:34] 2025-06-06 07:35:06,247 | INFO     |  -- lfn=log.45006595._006843.job.log.tgz.1, status_code=0, status=transferred
[2025-06-06 09:36:34] 2025-06-06 07:35:06,247 | INFO     | stage-out finished correctly
[2025-06-06 09:36:34] 2025-06-06 07:35:07,654 | INFO     | monitor loop #389: job 0:6677391064 is in state 'finished'
[2025-06-06 09:36:34] 2025-06-06 07:35:07,654 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:36:34] 2025-06-06 07:35:07,861 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-06-06 09:36:34] 2025-06-06 07:35:10,157 | INFO     | monitor loop #390: job 0:6677391064 is in state 'finished'
[2025-06-06 09:36:34] 2025-06-06 07:35:10,158 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:36:34] 2025-06-06 07:35:10,866 | INFO     | job 6677391064 has state=finished
[2025-06-06 09:36:34] 2025-06-06 07:35:10,867 | INFO     | preparing for final server update for job 6677391064 in state='finished'
[2025-06-06 09:36:34] 2025-06-06 07:35:11,560 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-06-06 09:36:34] 2025-06-06 07:35:11,561 | INFO     | this job has now completed (state=finished)
[2025-06-06 09:36:34] 2025-06-06 07:35:11,561 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-06-06 09:36:34] 2025-06-06 07:35:11,561 | INFO     | log transfer has been attempted: DONE
[2025-06-06 09:36:34] 2025-06-06 07:35:11,561 | INFO     | job 6677391064 has finished - writing final server update
[2025-06-06 09:36:34] 2025-06-06 07:35:11,561 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_6552/.job.ad'
[2025-06-06 09:36:34] 2025-06-06 07:35:11,561 | INFO     | total number of processed events: 400 (read)
[2025-06-06 09:36:34] 2025-06-06 07:35:11,569 | INFO     | executing command: lscpu
[2025-06-06 09:36:34] 2025-06-06 07:35:11,667 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-06 09:36:34] 2025-06-06 07:35:12,661 | INFO     | monitor loop #391: job 0:6677391064 is in state 'finished'
[2025-06-06 09:36:34] 2025-06-06 07:35:12,661 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:36:34] 2025-06-06 07:35:15,165 | INFO     | monitor loop #392: job 0:6677391064 is in state 'finished'
[2025-06-06 09:36:34] 2025-06-06 07:35:15,165 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-06 09:36:34] 2025-06-06 07:35:16,464 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-06 09:36:34] 2025-06-06 07:35:16,464 | INFO     | using path: /scratch/boinc/var/slot68/slots/0/PanDA_Pilot-6677391064/memory_monitor_summary.json (trf name=prmon)
[2025-06-06 09:36:34] 2025-06-06 07:35:16,465 | INFO     | extracted standard info from prmon json
[2025-06-06 09:36:34] 2025-06-06 07:35:16,465 | INFO     | extracted standard memory fields from prmon json
[2025-06-06 09:36:34] 2025-06-06 07:35:16,465 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-06 09:36:34] 2025-06-06 07:35:16,466 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-06 09:36:34] 2025-06-06 07:35:16,466 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-06 09:36:34] 2025-06-06 07:35:16,468 | INFO     | fitting pss+swap vs Time
[2025-06-06 09:36:34] 2025-06-06 07:35:16,468 | INFO     | sum of square deviations: 170944600.5
[2025-06-06 09:36:34] 2025-06-06 07:35:16,469 | INFO     | sum of deviations: 182071336.00000003
[2025-06-06 09:36:34] 2025-06-06 07:35:16,469 | INFO     | mean x: 1749192696.5
[2025-06-06 09:36:34] 2025-06-06 07:35:16,469 | INFO     | mean y: 2337259.048780488
[2025-06-06 09:36:34] 2025-06-06 07:35:16,469 | INFO     | -- intersect: -1860709893.313295
[2025-06-06 09:36:34] 2025-06-06 07:35:16,469 | INFO     | intersect: -1860709893.313295
[2025-06-06 09:36:34] 2025-06-06 07:35:16,469 | INFO     | chi2: 0.004715373513777034
[2025-06-06 09:36:34] 2025-06-06 07:35:16,469 | INFO     | -- intersect: -1860709893.313295
[2025-06-06 09:36:34] 2025-06-06 07:35:16,469 | INFO     | current memory leak: 1.07 B/s (using 82 data points, chi2=0.00)
[2025-06-06 09:36:34] 2025-06-06 07:35:16,470 | INFO     | ..............................
[2025-06-06 09:36:34] 2025-06-06 07:35:16,470 | INFO     | . Timing measurements:
[2025-06-06 09:36:34] 2025-06-06 07:35:16,470 | INFO     | . get job = 0 s
[2025-06-06 09:36:34] 2025-06-06 07:35:16,470 | INFO     | . initial setup = 1 s
[2025-06-06 09:36:34] 2025-06-06 07:35:16,470 | INFO     | . payload setup = 7 s
[2025-06-06 09:36:34] 2025-06-06 07:35:16,470 | INFO     | . stage-in = 0 s
[2025-06-06 09:36:34] 2025-06-06 07:35:16,470 | INFO     | . payload execution = 5386 s
[2025-06-06 09:36:34] 2025-06-06 07:35:16,471 | INFO     | . stage-out = 0 s
[2025-06-06 09:36:34] 2025-06-06 07:35:16,471 | INFO     | . log creation = 0 s
[2025-06-06 09:36:34] 2025-06-06 07:35:16,471 | INFO     | ..............................
[2025-06-06 09:36:34] 2025-06-06 07:35:16,555 | INFO     | 
[2025-06-06 09:36:34] 2025-06-06 07:35:16,555 | INFO     | job summary report
[2025-06-06 09:36:34] 2025-06-06 07:35:16,555 | INFO     | --------------------------------------------------
[2025-06-06 09:36:34] 2025-06-06 07:35:16,555 | INFO     | PanDA job id: 6677391064
[2025-06-06 09:36:34] 2025-06-06 07:35:16,555 | INFO     | task id: 45006595
[2025-06-06 09:36:34] 2025-06-06 07:35:16,555 | INFO     | errors: (none)
[2025-06-06 09:36:34] 2025-06-06 07:35:16,555 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-06 09:36:34] 2025-06-06 07:35:16,555 | INFO     | pilot state: finished 
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | transexitcode: 0
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | exeerrorcode: 0
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | exeerrordiag: 
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | exitcode: 0
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | exitmsg: OK
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | cpuconsumptiontime: 20278 s
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | nevents: 400
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | neventsw: 0
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | pid: 3523360
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | pgrp: 3523360
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | corecount: 4
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | event service: False
[2025-06-06 09:36:34] 2025-06-06 07:35:16,556 | INFO     | sizes: {0: 2397232, 1: 2397374, 5: 2397580, 11: 2397636, 5396: 2423992, 5397: 2423991, 5398: 2433138, 5399: 2433194, 5408: 2433364}
[2025-06-06 09:36:34] 2025-06-06 07:35:16,557 | INFO     | --------------------------------------------------
[2025-06-06 09:36:34] 2025-06-06 07:35:16,557 | INFO     | 
[2025-06-06 09:36:34] 2025-06-06 07:35:16,557 | INFO     | executing command: ls -lF /scratch/boinc/var/slot68/slots/0
[2025-06-06 09:36:34] 2025-06-06 07:35:16,584 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,585 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,585 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,585 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,585 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,585 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,585 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,585 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,585 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-06 09:36:34] 2025-06-06 07:35:16,586 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,587 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-06 09:36:34] 2025-06-06 07:35:16,587 | INFO     | job 6677391064 has completed (purged errors)
[2025-06-06 09:36:34] 2025-06-06 07:35:16,587 | INFO     | overall cleanup function is called
[2025-06-06 09:36:34] 2025-06-06 07:35:16,804 | INFO     | PID=3515351 has CPU usage=12.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-06 09:36:34] 2025-06-06 07:35:16,806 | INFO     | .. there are 4 such processes running
[2025-06-06 09:36:34] 2025-06-06 07:35:17,597 | INFO     | --- collectZombieJob: --- 10, [3523360]
[2025-06-06 09:36:34] 2025-06-06 07:35:17,597 | INFO     | zombie collector waiting for pid 3523360
[2025-06-06 09:36:34] 2025-06-06 07:35:17,597 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-06 09:36:34] 2025-06-06 07:35:17,597 | INFO     | collected zombie processes
[2025-06-06 09:36:34] 2025-06-06 07:35:17,598 | INFO     | will attempt to kill all subprocesses of pid=3523360
[2025-06-06 09:36:34] 2025-06-06 07:35:18,112 | INFO     | process IDs to be killed: [3523360] (in reverse order)
[2025-06-06 09:36:34] 2025-06-06 07:35:18,287 | WARNING  | found no corresponding commands to process id(s)
[2025-06-06 09:36:34] 2025-06-06 07:35:18,287 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-06 09:36:34] 2025-06-06 07:35:18,308 | INFO     | did not find any defunct processes belonging to 3523360
[2025-06-06 09:36:34] 2025-06-06 07:35:18,328 | INFO     | did not find any defunct processes belonging to 3523360
[2025-06-06 09:36:34] 2025-06-06 07:35:18,329 | INFO     | ready for new job
[2025-06-06 09:36:34] 2025-06-06 07:35:18,329 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-06 09:36:34] 2025-06-06 07:35:18,330 | INFO     | **************************************
[2025-06-06 09:36:34] 2025-06-06 07:35:18,330 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-06 09:36:34] 2025-06-06 07:35:18,331 | INFO     | **************************************
[2025-06-06 09:36:34] 2025-06-06 07:35:18,331 | INFO     | 
[2025-06-06 09:36:34] 2025-06-06 07:35:18,338 | INFO     | architecture information:
[2025-06-06 09:36:34] 2025-06-06 07:35:18,338 | INFO     | executing command: cat /etc/os-release
[2025-06-06 09:36:34] 2025-06-06 07:35:18,357 | INFO     | cat /etc/os-release:
[2025-06-06 09:36:34] NAME="CentOS Linux"
[2025-06-06 09:36:34] VERSION="7 (Core)"
[2025-06-06 09:36:34] ID="centos"
[2025-06-06 09:36:34] ID_LIKE="rhel fedora"
[2025-06-06 09:36:34] VERSION_ID="7"
[2025-06-06 09:36:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-06 09:36:34] ANSI_COLOR="0;31"
[2025-06-06 09:36:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-06 09:36:34] HOME_URL="https://www.centos.org/"
[2025-06-06 09:36:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-06 09:36:34] 
[2025-06-06 09:36:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-06 09:36:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-06 09:36:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-06 09:36:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-06 09:36:34] 
[2025-06-06 09:36:34] 2025-06-06 07:35:18,358 | INFO     | **************************************
[2025-06-06 09:36:34] 2025-06-06 07:35:18,860 | INFO     | executing command: df -mP /scratch/boinc/var/slot68/slots/0
[2025-06-06 09:36:34] 2025-06-06 07:35:18,882 | INFO     | sufficient remaining disk space (3305906372608 B)
[2025-06-06 09:36:34] 2025-06-06 07:35:18,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-06 09:36:34] 2025-06-06 07:35:18,883 | INFO     | current server update state: UPDATING_FINAL
[2025-06-06 09:36:34] 2025-06-06 07:35:18,883 | INFO     | update_server=False
[2025-06-06 09:36:34] 2025-06-06 07:35:18,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-06 09:36:34] 2025-06-06 07:35:18,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:36:34] 2025-06-06 07:35:18,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-06 09:36:34] 2025-06-06 07:35:18,884 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-06 09:36:34] 2025-06-06 07:35:18,884 | INFO     | aborting loop
[2025-06-06 09:36:34] 2025-06-06 07:35:18,884 | INFO     | found 0 job(s) in 20 queues
[2025-06-06 09:36:34] 2025-06-06 07:35:18,885 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-06 09:36:34] 2025-06-06 07:35:18,885 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-06 09:36:34] 2025-06-06 07:35:19,354 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-06 09:36:34] 2025-06-06 07:35:19,527 | INFO     | all data control threads have been joined
[2025-06-06 09:36:34] 2025-06-06 07:35:19,887 | INFO     | [job] retrieve thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:19,889 | INFO     | [job] job monitor thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:20,133 | INFO     | all job control threads have been joined
[2025-06-06 09:36:34] 2025-06-06 07:35:20,272 | INFO     | [payload] failed_post thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:20,359 | INFO     | all payload control threads have been joined
[2025-06-06 09:36:34] 2025-06-06 07:35:20,403 | INFO     | [job] validate thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:20,453 | INFO     | [job] create_data_payload thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:20,533 | INFO     | [data] control thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:20,564 | INFO     | [payload] validate_pre thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:20,647 | INFO     | [data] copytool_in thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:20,927 | INFO     | [payload] validate_post thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:20,957 | INFO     | [payload] execute_payloads thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:21,138 | INFO     | [job] control thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:21,360 | INFO     | [data] copytool_out thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:21,364 | INFO     | [payload] control thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:21,564 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-06 09:36:34] 2025-06-06 07:35:22,569 | INFO     | [job] queue monitor thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:22,890 | INFO     | [data] queue_monitor thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:29,037 | INFO     | job.realtimelogging is not enabled
[2025-06-06 09:36:34] 2025-06-06 07:35:30,042 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-06 09:36:34] 2025-06-06 07:35:30,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22836126639936)>', '<ExcThread(monitor, started 22835892295424)>']
[2025-06-06 09:36:34] 2025-06-06 07:35:30,945 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-06 09:36:34] 2025-06-06 07:35:30,945 | INFO     | [monitor] control thread has ended
[2025-06-06 09:36:34] 2025-06-06 07:35:35,913 | INFO     | all workflow threads have been joined
[2025-06-06 09:36:34] 2025-06-06 07:35:35,913 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-06 09:36:34] 2025-06-06 07:35:35,914 | INFO     | traces error code: 0
[2025-06-06 09:36:34] 2025-06-06 07:35:35,914 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-06 09:36:34] 2025-06-06 07:35:36,050 [wrapper] ==== pilot stdout END ====
[2025-06-06 09:36:34] 2025-06-06 07:35:36,053 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-06 09:36:34] 2025-06-06 07:35:36,056 [wrapper] pilotpid: 3515351
[2025-06-06 09:36:34] 2025-06-06 07:35:36,060 [wrapper] Pilot exit status: 0
[2025-06-06 09:36:34] 2025-06-06 07:35:36,073 [wrapper] pandaids: 6677391064
[2025-06-06 09:36:34] 2025-06-06 07:35:36,192 [wrapper] cleanup supervisor_pilot 3698874 3515352
[2025-06-06 09:36:34] 2025-06-06 07:35:36,198 [wrapper] Test setup, not cleaning
[2025-06-06 09:36:34] 2025-06-06 07:35:36,202 [wrapper] apfmon messages muted
[2025-06-06 09:36:34] 2025-06-06 07:35:36,206 [wrapper] ==== wrapper stdout END ====
[2025-06-06 09:36:34] 2025-06-06 07:35:36,209 [wrapper] ==== wrapper stderr END ====
[2025-06-06 09:36:34]  *** Error codes and diagnostics ***
[2025-06-06 09:36:34]     "exeErrorCode": 0,
[2025-06-06 09:36:34]     "exeErrorDiag": "",
[2025-06-06 09:36:34]     "pilotErrorCode": 0,
[2025-06-06 09:36:34]     "pilotErrorDiag": "",
[2025-06-06 09:36:34]  *** Listing of results directory ***
[2025-06-06 09:36:34] total 390864
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc    495897 Jun  2 20:02 pilot3.tar.gz
[2025-06-06 09:36:34] -rwx------ 1 boinc boinc     37140 Jun  2 20:07 runpilot2-wrapper.sh
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc      5111 Jun  2 20:07 queuedata.json
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc       100 Jun  6 08:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-06 09:36:34] -rwxr-xr-x 1 boinc boinc      7986 Jun  6 08:04 run_atlas
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc       105 Jun  6 08:04 job.xml
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc      6684 Jun  6 08:04 init_data.xml
[2025-06-06 09:36:34] -rw-r--r-- 2 boinc boinc 217921394 Jun  6 08:04 EVNT.45006593._000274.pool.root.1
[2025-06-06 09:36:34] -rw-r--r-- 2 boinc boinc     15093 Jun  6 08:04 start_atlas.sh
[2025-06-06 09:36:34] drwxrwx--x 2 boinc boinc      4096 Jun  6 08:04 shared
[2025-06-06 09:36:34] -rw-r--r-- 2 boinc boinc    508872 Jun  6 08:04 input.tar.gz
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc         0 Jun  6 08:04 boinc_lockfile
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc      2521 Jun  6 08:04 pandaJob.out
[2025-06-06 09:36:34] -rw------- 1 boinc boinc    988109 Jun  6 08:04 agis_schedconf.cvmfs.json
[2025-06-06 09:36:34] -rw------- 1 boinc boinc   1598969 Jun  6 08:04 agis_ddmendpoints.agis.ALL.json
[2025-06-06 09:36:34] drwx------ 4 boinc boinc      4096 Jun  6 08:04 pilot3
[2025-06-06 09:36:34] -rw------- 1 boinc boinc 176939557 Jun  6 09:34 HITS.45006595._006843.pool.root.1
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc       528 Jun  6 09:34 boinc_task_state.xml
[2025-06-06 09:36:34] -rw------- 1 boinc boinc      1027 Jun  6 09:35 memory_monitor_summary.json
[2025-06-06 09:36:34] -rw------- 1 boinc boinc        95 Jun  6 09:35 pilot_heartbeat.json
[2025-06-06 09:36:34] -rw------- 1 boinc boinc    254046 Jun  6 09:35 log.45006595._006843.job.log.tgz.1
[2025-06-06 09:36:34] -rw------- 1 boinc boinc      7690 Jun  6 09:35 heartbeat.json
[2025-06-06 09:36:34] -rw------- 1 boinc boinc      4559 Jun  6 09:35 pilotlog.txt
[2025-06-06 09:36:34] -rw------- 1 boinc boinc    518903 Jun  6 09:35 log.45006595._006843.job.log.1
[2025-06-06 09:36:34] -rw------- 1 boinc boinc       357 Jun  6 09:35 output.list
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc       620 Jun  6 09:35 runtime_log
[2025-06-06 09:36:34] -rw------- 1 boinc boinc    788480 Jun  6 09:35 result.tar.gz
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc      9025 Jun  6 09:35 runtime_log.err
[2025-06-06 09:36:34] -rw------- 1 boinc boinc       662 Jun  6 09:35 6SnMDmtkOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmO6VKDmebSa0m.diag
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc        26 Jun  6 09:36 wrapper_checkpoint.txt
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc      8192 Jun  6 09:36 boinc_mmap_file
[2025-06-06 09:36:34] -rw-r--r-- 1 boinc boinc     21775 Jun  6 09:36 stderr.txt
[2025-06-06 09:36:34] HITS file was successfully produced:
[2025-06-06 09:36:34] -rw------- 1 boinc boinc 176939557 Jun  6 09:34 shared/HITS.pool.root.1
[2025-06-06 09:36:34]  *** Contents of shared directory: ***
[2025-06-06 09:36:34] total 386908
[2025-06-06 09:36:34] -rw-r--r-- 2 boinc boinc 217921394 Jun  6 08:04 ATLAS.root_0
[2025-06-06 09:36:34] -rw-r--r-- 2 boinc boinc     15093 Jun  6 08:04 start_atlas.sh
[2025-06-06 09:36:34] -rw-r--r-- 2 boinc boinc    508872 Jun  6 08:04 input.tar.gz
[2025-06-06 09:36:34] -rw------- 1 boinc boinc 176939557 Jun  6 09:34 HITS.pool.root.1
[2025-06-06 09:36:34] -rw------- 1 boinc boinc    788480 Jun  6 09:35 result.tar.gz
09:36:35 (3511431): run_atlas exited; CPU time 20524.874854
09:36:35 (3511431): called boinc_finish(0)

</stderr_txt>
]]>

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