Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:31:54 (7008): wrapper (7.7.26015): starting
03:31:54 (7008): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:31:54] Arguments: --nthreads 8
[2025-06-03 03:31:54] Threads: 8
[2025-06-03 03:31:54] Checking for CVMFS
[2025-06-03 03:31:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:31:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:31:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:31:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:31:56] 2.11.2.0 13961 31134 89888 146723 1 155 22244382 25165824 4335 130560 0 15526614 99.760 18556480 2321 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 03:31:56] CVMFS is ok
[2025-06-03 03:31:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:31:56] Checking for apptainer binary...
[2025-06-03 03:31:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:31:56] Running /usr/bin/apptainer --version
[2025-06-03 03:31:56] apptainer version 1.3.2-1.el7
[2025-06-03 03:31:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:31:59] cg-vwn452.simple-grid.lan
[2025-06-03 03:31:59] apptainer works
[2025-06-03 03:31:59] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:31:59] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:31:59] Starting ATLAS job with PandaID=6677381730
[2025-06-03 03:31:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:06:27]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:06:27] 2025-06-03 05:14:49,790 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:06:27] 2025-06-03 05:14:49,790 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:06:27] 2025-06-03 05:14:49,790 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:06:27] 2025-06-03 05:14:49,790 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:06:27] 2025-06-03 05:14:49,795 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:06:27] 2025-06-03 05:14:49,796 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,798 | INFO     | sum of deviations: -18462469779.000004
[2025-06-03 08:06:27] 2025-06-03 05:14:49,798 | INFO     | mean x: 1748920993.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,798 | INFO     | mean y: 2496393.580645161
[2025-06-03 08:06:27] 2025-06-03 05:14:49,798 | INFO     | -- intersect: 10193373998.817377
[2025-06-03 08:06:27] 2025-06-03 05:14:49,798 | INFO     | intersect: 10193373998.817377
[2025-06-03 08:06:27] 2025-06-03 05:14:49,805 | INFO     | chi2: 2.556719074229006
[2025-06-03 08:06:27] 2025-06-03 05:14:49,806 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,808 | INFO     | sum of deviations: -3672007270.500002
[2025-06-03 08:06:27] 2025-06-03 05:14:49,808 | INFO     | mean x: 1748920840.5
[2025-06-03 08:06:27] 2025-06-03 05:14:49,808 | INFO     | mean y: 2506742.9103773586
[2025-06-03 08:06:27] 2025-06-03 05:14:49,808 | INFO     | -- intersect: 2176195413.0133348
[2025-06-03 08:06:27] 2025-06-03 05:14:49,808 | INFO     | intersect: 2176195413.0133348
[2025-06-03 08:06:27] 2025-06-03 05:14:49,809 | INFO     | chi2: 1.793450748281975
[2025-06-03 08:06:27] 2025-06-03 05:14:49,809 | INFO     | current chi2=1.793450748281975 (change=29.853429484707817 %)
[2025-06-03 08:06:27] 2025-06-03 05:14:49,809 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,811 | INFO     | sum of deviations: -3411879694.0000033
[2025-06-03 08:06:27] 2025-06-03 05:14:49,811 | INFO     | mean x: 1748920688.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,811 | INFO     | mean y: 2506937.2608695654
[2025-06-03 08:06:27] 2025-06-03 05:14:49,811 | INFO     | -- intersect: 2172131052.8382783
[2025-06-03 08:06:27] 2025-06-03 05:14:49,812 | INFO     | intersect: 2172131052.8382783
[2025-06-03 08:06:27] 2025-06-03 05:14:49,812 | INFO     | chi2: 1.7934637583332467
[2025-06-03 08:06:27] 2025-06-03 05:14:49,812 | INFO     | current chi2=1.7934637583332467 (change=-0.0007254200475868361 %)
[2025-06-03 08:06:27] 2025-06-03 05:14:49,812 | INFO     | right removable region: 206
[2025-06-03 08:06:27] 2025-06-03 05:14:49,813 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,814 | INFO     | sum of deviations: -54109175168.50001
[2025-06-03 08:06:27] 2025-06-03 05:14:49,815 | INFO     | mean x: 1748921145.5
[2025-06-03 08:06:27] 2025-06-03 05:14:49,815 | INFO     | mean y: 2521556.004716981
[2025-06-03 08:06:27] 2025-06-03 05:14:49,815 | INFO     | -- intersect: 32033101252.513317
[2025-06-03 08:06:27] 2025-06-03 05:14:49,815 | INFO     | intersect: 32033101252.513317
[2025-06-03 08:06:27] 2025-06-03 05:14:49,815 | INFO     | chi2: 0.9807281722206822
[2025-06-03 08:06:27] 2025-06-03 05:14:49,815 | INFO     | current chi2=0.9807281722206822 (change=61.64114461748495 %)
[2025-06-03 08:06:27] 2025-06-03 05:14:49,816 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,817 | INFO     | sum of deviations: -52864131405.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,818 | INFO     | mean x: 1748921298.0
[2025-06-03 08:06:27] 2025-06-03 05:14:49,818 | INFO     | mean y: 2520586.782608696
[2025-06-03 08:06:27] 2025-06-03 05:14:49,818 | INFO     | -- intersect: 33618985596.148235
[2025-06-03 08:06:27] 2025-06-03 05:14:49,818 | INFO     | intersect: 33618985596.148235
[2025-06-03 08:06:27] 2025-06-03 05:14:49,818 | INFO     | chi2: 0.9665236716809764
[2025-06-03 08:06:27] 2025-06-03 05:14:49,818 | INFO     | current chi2=0.9665236716809764 (change=1.4483626495140094 %)
[2025-06-03 08:06:27] 2025-06-03 05:14:49,818 | INFO     | left removable region: 20
[2025-06-03 08:06:27] 2025-06-03 05:14:49,819 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 08:06:27] 2025-06-03 05:14:49,820 | INFO     | sum of deviations: -24809127640.5
[2025-06-03 08:06:27] 2025-06-03 05:14:49,820 | INFO     | mean x: 1748921267.5
[2025-06-03 08:06:27] 2025-06-03 05:14:49,820 | INFO     | mean y: 2522318.424731183
[2025-06-03 08:06:27] 2025-06-03 05:14:49,820 | INFO     | -- intersect: 21748405432.757572
[2025-06-03 08:06:27] 2025-06-03 05:14:49,821 | INFO     | intersect: 21748405432.757572
[2025-06-03 08:06:27] 2025-06-03 05:14:49,821 | INFO     | chi2: 0.15295165429979002
[2025-06-03 08:06:27] 2025-06-03 05:14:49,821 | INFO     | -- intersect: 21748405432.757572
[2025-06-03 08:06:27] 2025-06-03 05:14:49,821 | INFO     | current memory leak: -12.43 B/s (using 186 data points, chi2=0.15)
[2025-06-03 08:06:27] 2025-06-03 05:14:49,822 | INFO     | ..............................
[2025-06-03 08:06:27] 2025-06-03 05:14:49,822 | INFO     | . Timing measurements:
[2025-06-03 08:06:27] 2025-06-03 05:14:49,822 | INFO     | . get job = 0 s
[2025-06-03 08:06:27] 2025-06-03 05:14:49,822 | INFO     | . initial setup = 3 s
[2025-06-03 08:06:27] 2025-06-03 05:14:49,822 | INFO     | . payload setup = 11 s
[2025-06-03 08:06:27] 2025-06-03 05:14:49,823 | INFO     | . stage-in = 0 s
[2025-06-03 08:06:27] 2025-06-03 05:14:49,823 | INFO     | . payload execution = 13211 s
[2025-06-03 08:06:27] 2025-06-03 05:14:49,823 | INFO     | . stage-out = 4 s
[2025-06-03 08:06:27] 2025-06-03 05:14:49,823 | INFO     | . log creation = 1 s
[2025-06-03 08:06:27] 2025-06-03 05:14:49,823 | INFO     | ..............................
[2025-06-03 08:06:27] 2025-06-03 05:14:49,910 | INFO     | PID=12138 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 08:06:27] 2025-06-03 05:14:49,910 | INFO     | .. there are 9 such processes running
[2025-06-03 08:06:27] 2025-06-03 05:14:50,064 | INFO     | 
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | job summary report
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | --------------------------------------------------
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | PanDA job id: 6677381730
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | task id: 45006595
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | errors: (none)
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | pilot state: finished 
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | transexitcode: 0
[2025-06-03 08:06:27] 2025-06-03 05:14:50,065 | INFO     | exeerrorcode: 0
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | exeerrordiag: 
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | exitcode: 0
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | exitmsg: OK
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | cpuconsumptiontime: 49607 s
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | nevents: 400
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | neventsw: 0
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | pid: 19300
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | pgrp: 19300
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | corecount: 8
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | event service: False
[2025-06-03 08:06:27] 2025-06-03 05:14:50,066 | INFO     | sizes: {0: 2405004, 1: 2405203, 2: 2405203, 11: 2405437, 12: 2405465, 13228: 2435212, 13233: 2444153, 13236: 2444209, 13319: 2444379}
[2025-06-03 08:06:27] 2025-06-03 05:14:50,067 | INFO     | --------------------------------------------------
[2025-06-03 08:06:27] 2025-06-03 05:14:50,067 | INFO     | 
[2025-06-03 08:06:27] 2025-06-03 05:14:50,067 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 08:06:27] 2025-06-03 05:14:50,695 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,696 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,696 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,696 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,696 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,696 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,696 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,696 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,696 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,697 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:06:27] 2025-06-03 05:14:50,698 | INFO     | job 6677381730 has completed (purged errors)
[2025-06-03 08:06:27] 2025-06-03 05:14:50,698 | INFO     | overall cleanup function is called
[2025-06-03 08:06:27] 2025-06-03 05:14:51,707 | INFO     | --- collectZombieJob: --- 10, [19300]
[2025-06-03 08:06:27] 2025-06-03 05:14:51,707 | INFO     | zombie collector waiting for pid 19300
[2025-06-03 08:06:27] 2025-06-03 05:14:51,707 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:06:27] 2025-06-03 05:14:51,708 | INFO     | collected zombie processes
[2025-06-03 08:06:27] 2025-06-03 05:14:51,708 | INFO     | will attempt to kill all subprocesses of pid=19300
[2025-06-03 08:06:27] 2025-06-03 05:14:51,811 | INFO     | process IDs to be killed: [19300] (in reverse order)
[2025-06-03 08:06:27] 2025-06-03 05:14:52,463 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:06:27] 2025-06-03 05:14:52,463 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:06:27] 2025-06-03 05:14:52,467 | INFO     | did not find any defunct processes belonging to 19300
[2025-06-03 08:06:27] 2025-06-03 05:14:52,471 | INFO     | did not find any defunct processes belonging to 19300
[2025-06-03 08:06:27] 2025-06-03 05:14:52,471 | INFO     | ready for new job
[2025-06-03 08:06:27] 2025-06-03 05:14:52,471 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:06:27] 2025-06-03 05:14:52,474 | INFO     | **************************************
[2025-06-03 08:06:27] 2025-06-03 05:14:52,474 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:06:27] 2025-06-03 05:14:52,474 | INFO     | **************************************
[2025-06-03 08:06:27] 2025-06-03 05:14:52,474 | INFO     | 
[2025-06-03 08:06:27] 2025-06-03 05:14:52,475 | INFO     | pilot is running in a VM
[2025-06-03 08:06:27] 2025-06-03 05:14:52,475 | INFO     | architecture information:
[2025-06-03 08:06:27] 2025-06-03 05:14:52,485 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:06:27] 2025-06-03 05:14:52,703 | INFO     | cat /etc/os-release:
[2025-06-03 08:06:27] NAME="CentOS Linux"
[2025-06-03 08:06:27] VERSION="7 (Core)"
[2025-06-03 08:06:27] ID="centos"
[2025-06-03 08:06:27] ID_LIKE="rhel fedora"
[2025-06-03 08:06:27] VERSION_ID="7"
[2025-06-03 08:06:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:06:27] ANSI_COLOR="0;31"
[2025-06-03 08:06:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:06:27] HOME_URL="https://www.centos.org/"
[2025-06-03 08:06:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:06:27] 
[2025-06-03 08:06:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:06:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:06:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:06:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:06:27] 
[2025-06-03 08:06:27] 2025-06-03 05:14:52,703 | INFO     | **************************************
[2025-06-03 08:06:27] 2025-06-03 05:14:53,207 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 08:06:27] 2025-06-03 05:14:53,511 | INFO     | sufficient remaining disk space (496886611968 B)
[2025-06-03 08:06:27] 2025-06-03 05:14:53,511 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:06:27] 2025-06-03 05:14:53,511 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:06:27] 2025-06-03 05:14:53,511 | INFO     | update_server=False
[2025-06-03 08:06:27] 2025-06-03 05:14:53,512 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:06:27] 2025-06-03 05:14:53,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:06:27] 2025-06-03 05:14:53,512 | INFO     | aborting loop
[2025-06-03 08:06:27] 2025-06-03 05:14:53,516 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:06:27] 2025-06-03 05:14:53,929 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:06:27] 2025-06-03 05:14:53,929 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:06:27] 2025-06-03 05:14:53,930 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:06:27] 2025-06-03 05:14:54,342 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:06:27] 2025-06-03 05:14:54,392 | INFO     | all data control threads have been joined
[2025-06-03 08:06:27] 2025-06-03 05:14:54,518 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:54,521 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:54,612 | INFO     | all payload control threads have been joined
[2025-06-03 08:06:27] 2025-06-03 05:14:54,805 | INFO     | [job] validate thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,031 | INFO     | all job control threads have been joined
[2025-06-03 08:06:27] 2025-06-03 05:14:55,078 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:06:27] 2025-06-03 05:14:55,247 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,333 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,398 | INFO     | [data] control thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,404 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,490 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,523 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,548 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,618 | INFO     | [payload] control thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,819 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:55,836 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:56,036 | INFO     | [job] control thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:56,084 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:58,350 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:06:27] 2025-06-03 05:14:58,664 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140335474091840)>', '<ExcThread(monitor, started 140334734489344)>']
[2025-06-03 08:06:27] 2025-06-03 05:14:58,959 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:06:27] 2025-06-03 05:14:58,959 | INFO     | [monitor] control thread has ended
[2025-06-03 08:06:27] 2025-06-03 05:15:03,690 | INFO     | all workflow threads have been joined
[2025-06-03 08:06:27] 2025-06-03 05:15:03,690 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:06:27] 2025-06-03 05:15:03,691 | INFO     | traces error code: 0
[2025-06-03 08:06:27] 2025-06-03 05:15:03,691 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:06:27] 2025-06-03 05:15:04,026 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:06:27] 2025-06-03 05:15:04,122 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:06:27] 2025-06-03 05:15:04,229 [wrapper] pilotpid: 12138
[2025-06-03 08:06:27] 2025-06-03 05:15:04,339 [wrapper] Pilot exit status: 0
[2025-06-03 08:06:27] 2025-06-03 05:15:04,786 [wrapper] pandaids: 6677381730
[2025-06-03 08:06:27] 2025-06-03 05:15:05,341 [wrapper] cleanup supervisor_pilot 25674 12139
[2025-06-03 08:06:27] 2025-06-03 05:15:05,428 [wrapper] Test setup, not cleaning
[2025-06-03 08:06:27] 2025-06-03 05:15:05,477 [wrapper] apfmon messages muted
[2025-06-03 08:06:27] 2025-06-03 05:15:05,577 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:06:27] 2025-06-03 05:15:05,677 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:06:27]  *** Error codes and diagnostics ***
[2025-06-03 08:06:27]     "exeErrorCode": 0,
[2025-06-03 08:06:27]     "exeErrorDiag": "",
[2025-06-03 08:06:27]     "pilotErrorCode": 0,
[2025-06-03 08:06:27]     "pilotErrorDiag": "",
[2025-06-03 08:06:27]  *** Listing of results directory ***
[2025-06-03 08:06:27] total 393980
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:55 queuedata.json
[2025-06-03 08:06:27] -rwx------. 1 boinc boinc     37140 Jun  2 17:56 runpilot2-wrapper.sh
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc       100 Jun  3 03:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:06:27] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 03:31 run_atlas
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc       105 Jun  3 03:31 job.xml
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc      6390 Jun  3 03:31 init_data.xml
[2025-06-03 08:06:27] -rw-r--r--. 2 boinc boinc 216676288 Jun  3 03:31 EVNT.45006593._000105.pool.root.1
[2025-06-03 08:06:27] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:31 start_atlas.sh
[2025-06-03 08:06:27] drwxrwx--x. 2 boinc boinc        68 Jun  3 03:31 shared
[2025-06-03 08:06:27] -rw-r--r--. 2 boinc boinc    508879 Jun  3 03:31 input.tar.gz
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc         0 Jun  3 03:31 boinc_lockfile
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc      2520 Jun  3 03:31 pandaJob.out
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc    988081 Jun  3 03:32 agis_schedconf.cvmfs.json
[2025-06-03 08:06:27] drwx------. 4 boinc boinc      4096 Jun  3 03:32 pilot3
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc 179904126 Jun  3 07:12 HITS.45006595._002604.pool.root.1
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:12 boinc_task_state.xml
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc      1017 Jun  3 07:13 memory_monitor_summary.json
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc   1603667 Jun  3 07:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc    364424 Jun  3 07:13 log.45006595._002604.job.log.tgz.1
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc      7684 Jun  3 07:14 heartbeat.json
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc        95 Jun  3 07:14 pilot_heartbeat.json
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc      4416 Jun  3 07:15 pilotlog.txt
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc   1153257 Jun  3 07:15 log.45006595._002604.job.log.1
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc       357 Jun  3 07:15 output.list
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:15 runtime_log
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc   1536000 Jun  3 07:15 result.tar.gz
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc      8659 Jun  3 07:15 runtime_log.err
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc       656 Jun  3 07:15 j0MMDmohMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmiiVKDm7dSUFm.diag
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:06 boinc_mmap_file
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:06 wrapper_checkpoint.txt
[2025-06-03 08:06:27] -rw-r--r--. 1 boinc boinc     20568 Jun  3 08:06 stderr.txt
[2025-06-03 08:06:27] HITS file was successfully produced:
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc 179904126 Jun  3 07:12 shared/HITS.pool.root.1
[2025-06-03 08:06:27]  *** Contents of shared directory: ***
[2025-06-03 08:06:27] total 389304
[2025-06-03 08:06:27] -rw-r--r--. 2 boinc boinc 216676288 Jun  3 03:31 ATLAS.root_0
[2025-06-03 08:06:27] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:31 start_atlas.sh
[2025-06-03 08:06:27] -rw-r--r--. 2 boinc boinc    508879 Jun  3 03:31 input.tar.gz
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc 179904126 Jun  3 07:12 HITS.pool.root.1
[2025-06-03 08:06:27] -rw-------. 1 boinc boinc   1536000 Jun  3 07:15 result.tar.gz
08:06:29 (7008): run_atlas exited; CPU time 49780.911273
08:06:29 (7008): called boinc_finish(0)

</stderr_txt>
]]>

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