Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:30:54 (10044): wrapper (7.7.26015): starting
04:30:54 (10044): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:30:54] Arguments: --nthreads 8
[2025-06-03 04:30:54] Threads: 8
[2025-06-03 04:30:54] Checking for CVMFS
[2025-06-03 04:30:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:30:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:30:55] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:30:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:30:56] 2.11.2.0 15878 31170 95752 146724 3 16 21588215 25165825 4635 130560 0 15730452 99.752 18929208 2122 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 04:30:56] CVMFS is ok
[2025-06-03 04:30:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:30:56] Checking for apptainer binary...
[2025-06-03 04:30:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:30:56] Running /usr/bin/apptainer --version
[2025-06-03 04:30:56] apptainer version 1.3.2-1.el7
[2025-06-03 04:30:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:31:07] cg-vwn433.simple-grid.lan
[2025-06-03 04:31:07] apptainer works
[2025-06-03 04:31:07] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:31:07] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:31:07] Starting ATLAS job with PandaID=6677390526
[2025-06-03 04:31:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:37:06]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:37:06] 2025-06-03 06:23:01,472 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:37:06] 2025-06-03 06:23:01,473 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:37:06] 2025-06-03 06:23:01,473 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:37:06] 2025-06-03 06:23:01,473 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:37:06] 2025-06-03 06:23:01,478 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:37:06] 2025-06-03 06:23:01,479 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,481 | INFO     | sum of deviations: 32407775640.500008
[2025-06-03 08:37:06] 2025-06-03 06:23:01,481 | INFO     | mean x: 1748925093.5
[2025-06-03 08:37:06] 2025-06-03 06:23:01,481 | INFO     | mean y: 2499001.2083333335
[2025-06-03 08:37:06] 2025-06-03 06:23:01,481 | INFO     | -- intersect: -18135528819.816525
[2025-06-03 08:37:06] 2025-06-03 06:23:01,481 | INFO     | intersect: -18135528819.816525
[2025-06-03 08:37:06] 2025-06-03 06:23:01,482 | INFO     | chi2: 7.749576492331666
[2025-06-03 08:37:06] 2025-06-03 06:23:01,482 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,483 | INFO     | sum of deviations: 47128956911.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,484 | INFO     | mean x: 1748924941.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,484 | INFO     | mean y: 2509397.317535545
[2025-06-03 08:37:06] 2025-06-03 06:23:01,484 | INFO     | -- intersect: -28294658003.10959
[2025-06-03 08:37:06] 2025-06-03 06:23:01,484 | INFO     | intersect: -28294658003.10959
[2025-06-03 08:37:06] 2025-06-03 06:23:01,484 | INFO     | chi2: 7.0526889694522765
[2025-06-03 08:37:06] 2025-06-03 06:23:01,484 | INFO     | current chi2=7.0526889694522765 (change=8.992588479757204 %)
[2025-06-03 08:37:06] 2025-06-03 06:23:01,484 | INFO     | right removable region: 210
[2025-06-03 08:37:06] 2025-06-03 06:23:01,485 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,486 | INFO     | sum of deviations: -44135959459.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,487 | INFO     | mean x: 1748925246.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,487 | INFO     | mean y: 2554009.8293838864
[2025-06-03 08:37:06] 2025-06-03 06:23:01,487 | INFO     | -- intersect: 26502670559.22538
[2025-06-03 08:37:06] 2025-06-03 06:23:01,487 | INFO     | intersect: 26502670559.22538
[2025-06-03 08:37:06] 2025-06-03 06:23:01,487 | INFO     | chi2: 2.7539850806885617
[2025-06-03 08:37:06] 2025-06-03 06:23:01,487 | INFO     | current chi2=2.7539850806885617 (change=64.46276666326636 %)
[2025-06-03 08:37:06] 2025-06-03 06:23:01,488 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 08:37:06] 2025-06-03 06:23:01,489 | INFO     | sum of deviations: -86275787431.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,489 | INFO     | mean x: 1748925398.5
[2025-06-03 08:37:06] 2025-06-03 06:23:01,489 | INFO     | mean y: 2585625.6116504855
[2025-06-03 08:37:06] 2025-06-03 06:23:01,490 | INFO     | -- intersect: 55668630538.16601
[2025-06-03 08:37:06] 2025-06-03 06:23:01,490 | INFO     | intersect: 55668630538.16601
[2025-06-03 08:37:06] 2025-06-03 06:23:01,490 | INFO     | chi2: 1.041435763687741
[2025-06-03 08:37:06] 2025-06-03 06:23:01,490 | INFO     | current chi2=1.041435763687741 (change=62.184407933417084 %)
[2025-06-03 08:37:06] 2025-06-03 06:23:01,491 | INFO     | sum of square deviations: 2518000700.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,492 | INFO     | sum of deviations: -89563086947.00003
[2025-06-03 08:37:06] 2025-06-03 06:23:01,492 | INFO     | mean x: 1748925551.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,492 | INFO     | mean y: 2588171.1293532336
[2025-06-03 08:37:06] 2025-06-03 06:23:01,493 | INFO     | -- intersect: 62210343390.59491
[2025-06-03 08:37:06] 2025-06-03 06:23:01,493 | INFO     | intersect: 62210343390.59491
[2025-06-03 08:37:06] 2025-06-03 06:23:01,493 | INFO     | chi2: 0.9673661740520989
[2025-06-03 08:37:06] 2025-06-03 06:23:01,493 | INFO     | current chi2=0.9673661740520989 (change=7.1122571567314345 %)
[2025-06-03 08:37:06] 2025-06-03 06:23:01,493 | INFO     | left removable region: 30
[2025-06-03 08:37:06] 2025-06-03 06:23:01,494 | INFO     | sum of square deviations: 1808350185.0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,495 | INFO     | sum of deviations: -59710066336.5
[2025-06-03 08:37:06] 2025-06-03 06:23:01,495 | INFO     | mean x: 1748925825.5
[2025-06-03 08:37:06] 2025-06-03 06:23:01,496 | INFO     | mean y: 2590131.027777778
[2025-06-03 08:37:06] 2025-06-03 06:23:01,496 | INFO     | -- intersect: 57750518560.17936
[2025-06-03 08:37:06] 2025-06-03 06:23:01,496 | INFO     | intersect: 57750518560.17936
[2025-06-03 08:37:06] 2025-06-03 06:23:01,496 | INFO     | chi2: 0.16973055412089574
[2025-06-03 08:37:06] 2025-06-03 06:23:01,496 | INFO     | -- intersect: 57750518560.17936
[2025-06-03 08:37:06] 2025-06-03 06:23:01,497 | INFO     | current memory leak: -33.02 B/s (using 180 data points, chi2=0.17)
[2025-06-03 08:37:06] 2025-06-03 06:23:01,497 | INFO     | ..............................
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | . Timing measurements:
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | . get job = 0 s
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | . initial setup = 5 s
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | . payload setup = 160 s
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | . stage-in = 0 s
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | . payload execution = 13290 s
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | . stage-out = 6 s
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | . log creation = 2 s
[2025-06-03 08:37:06] 2025-06-03 06:23:01,498 | INFO     | ..............................
[2025-06-03 08:37:06] 2025-06-03 06:23:01,630 | INFO     | 
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | job summary report
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | --------------------------------------------------
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | PanDA job id: 6677390526
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | task id: 45006595
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | errors: (none)
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | pilot state: finished 
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | transexitcode: 0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | exeerrorcode: 0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | exeerrordiag: 
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | exitcode: 0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,631 | INFO     | exitmsg: OK
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | cpuconsumptiontime: 49015 s
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | nevents: 400
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | neventsw: 0
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | pid: 22072
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | pgrp: 22072
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | corecount: 8
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | event service: False
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 22: 2405233, 33: 2405261, 44: 2405317, 55: 2405473, 65: 2405501, 76: 2405529, 84: 2405791, 87: 2405819, 13456: 2435675
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | --------------------------------------------------
[2025-06-03 08:37:06] 2025-06-03 06:23:01,632 | INFO     | 
[2025-06-03 08:37:06] 2025-06-03 06:23:01,633 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 08:37:06] 2025-06-03 06:23:02,085 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,085 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,085 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,086 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,087 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,087 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,087 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,087 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:37:06] 2025-06-03 06:23:02,087 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,087 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:37:06] 2025-06-03 06:23:02,087 | INFO     | job 6677390526 has completed (purged errors)
[2025-06-03 08:37:06] 2025-06-03 06:23:02,087 | INFO     | overall cleanup function is called
[2025-06-03 08:37:06] 2025-06-03 06:23:03,096 | INFO     | --- collectZombieJob: --- 10, [22072]
[2025-06-03 08:37:06] 2025-06-03 06:23:03,097 | INFO     | zombie collector waiting for pid 22072
[2025-06-03 08:37:06] 2025-06-03 06:23:03,097 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:37:06] 2025-06-03 06:23:03,097 | INFO     | collected zombie processes
[2025-06-03 08:37:06] 2025-06-03 06:23:03,097 | INFO     | will attempt to kill all subprocesses of pid=22072
[2025-06-03 08:37:06] 2025-06-03 06:23:03,207 | INFO     | process IDs to be killed: [22072] (in reverse order)
[2025-06-03 08:37:06] 2025-06-03 06:23:03,949 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:37:06] 2025-06-03 06:23:03,950 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:37:06] 2025-06-03 06:23:03,953 | INFO     | did not find any defunct processes belonging to 22072
[2025-06-03 08:37:06] 2025-06-03 06:23:03,962 | INFO     | did not find any defunct processes belonging to 22072
[2025-06-03 08:37:06] 2025-06-03 06:23:03,963 | INFO     | ready for new job
[2025-06-03 08:37:06] 2025-06-03 06:23:03,963 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:37:06] 2025-06-03 06:23:03,965 | INFO     | **************************************
[2025-06-03 08:37:06] 2025-06-03 06:23:03,965 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:37:06] 2025-06-03 06:23:03,965 | INFO     | **************************************
[2025-06-03 08:37:06] 2025-06-03 06:23:03,965 | INFO     | 
[2025-06-03 08:37:06] 2025-06-03 06:23:03,966 | INFO     | pilot is running in a VM
[2025-06-03 08:37:06] 2025-06-03 06:23:03,966 | INFO     | architecture information:
[2025-06-03 08:37:06] 2025-06-03 06:23:03,981 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:37:06] 2025-06-03 06:23:04,257 | INFO     | cat /etc/os-release:
[2025-06-03 08:37:06] NAME="CentOS Linux"
[2025-06-03 08:37:06] VERSION="7 (Core)"
[2025-06-03 08:37:06] ID="centos"
[2025-06-03 08:37:06] ID_LIKE="rhel fedora"
[2025-06-03 08:37:06] VERSION_ID="7"
[2025-06-03 08:37:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:37:06] ANSI_COLOR="0;31"
[2025-06-03 08:37:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:37:06] HOME_URL="https://www.centos.org/"
[2025-06-03 08:37:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:37:06] 
[2025-06-03 08:37:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:37:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:37:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:37:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:37:06] 
[2025-06-03 08:37:06] 2025-06-03 06:23:04,258 | INFO     | **************************************
[2025-06-03 08:37:06] 2025-06-03 06:23:04,762 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 08:37:06] 2025-06-03 06:23:05,014 | INFO     | sufficient remaining disk space (496443064320 B)
[2025-06-03 08:37:06] 2025-06-03 06:23:05,015 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:37:06] 2025-06-03 06:23:05,015 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:37:06] 2025-06-03 06:23:05,015 | INFO     | update_server=False
[2025-06-03 08:37:06] 2025-06-03 06:23:05,015 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:37:06] 2025-06-03 06:23:05,257 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:37:06] 2025-06-03 06:23:05,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:37:06] 2025-06-03 06:23:05,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:37:06] 2025-06-03 06:23:05,281 | INFO     | all data control threads have been joined
[2025-06-03 08:37:06] 2025-06-03 06:23:05,375 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 08:37:06] 2025-06-03 06:23:05,376 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 08:37:06] 2025-06-03 06:23:05,376 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:37:06] 2025-06-03 06:23:05,376 | INFO     | will abort loop
[2025-06-03 08:37:06] 2025-06-03 06:23:05,503 | INFO     | all payload control threads have been joined
[2025-06-03 08:37:06] 2025-06-03 06:23:06,021 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,048 | INFO     | all job control threads have been joined
[2025-06-03 08:37:06] 2025-06-03 06:23:06,288 | INFO     | [data] control thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,379 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,383 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:37:06] 2025-06-03 06:23:06,510 | INFO     | [payload] control thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,652 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:37:06] 2025-06-03 06:23:06,660 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,698 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,725 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,774 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,895 | INFO     | [job] validate thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:06,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:07,055 | INFO     | [job] control thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:07,477 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:07,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:37:06] 2025-06-03 06:23:07,659 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:08,485 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:11,652 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:37:06] 2025-06-03 06:23:13,498 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140332642195264)>', '<ExcThread(monitor, started 140332058527488)>']
[2025-06-03 08:37:06] 2025-06-03 06:23:14,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:37:06] 2025-06-03 06:23:14,312 | INFO     | [monitor] control thread has ended
[2025-06-03 08:37:06] 2025-06-03 06:23:18,523 | INFO     | all workflow threads have been joined
[2025-06-03 08:37:06] 2025-06-03 06:23:18,524 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:37:06] 2025-06-03 06:23:18,524 | INFO     | traces error code: 0
[2025-06-03 08:37:06] 2025-06-03 06:23:18,524 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:37:06] 2025-06-03 06:23:18,822 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:37:06] 2025-06-03 06:23:18,883 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:37:06] 2025-06-03 06:23:18,955 [wrapper] pilotpid: 15420
[2025-06-03 08:37:06] 2025-06-03 06:23:19,026 [wrapper] Pilot exit status: 0
[2025-06-03 08:37:06] 2025-06-03 06:23:19,426 [wrapper] pandaids: 6677390526
[2025-06-03 08:37:06] 2025-06-03 06:23:20,079 [wrapper] cleanup supervisor_pilot  2114 15421
[2025-06-03 08:37:06] 2025-06-03 06:23:20,112 [wrapper] Test setup, not cleaning
[2025-06-03 08:37:06] 2025-06-03 06:23:20,215 [wrapper] apfmon messages muted
[2025-06-03 08:37:06] 2025-06-03 06:23:20,274 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:37:06] 2025-06-03 06:23:20,330 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:37:06]  *** Error codes and diagnostics ***
[2025-06-03 08:37:06]     "exeErrorCode": 0,
[2025-06-03 08:37:06]     "exeErrorDiag": "",
[2025-06-03 08:37:06]     "pilotErrorCode": 0,
[2025-06-03 08:37:06]     "pilotErrorDiag": "",
[2025-06-03 08:37:06]  *** Listing of results directory ***
[2025-06-03 08:37:06] total 396080
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:47 pilot3.tar.gz
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc      5111 Jun  2 20:00 queuedata.json
[2025-06-03 08:37:06] -rwx------. 1 boinc boinc     37140 Jun  2 20:00 runpilot2-wrapper.sh
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc       100 Jun  3 04:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:37:06] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 04:30 run_atlas
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc       105 Jun  3 04:30 job.xml
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc      6392 Jun  3 04:30 init_data.xml
[2025-06-03 08:37:06] -rw-r--r--. 2 boinc boinc 216555804 Jun  3 04:30 EVNT.45006593._000265.pool.root.1
[2025-06-03 08:37:06] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:30 start_atlas.sh
[2025-06-03 08:37:06] drwxrwx--x. 2 boinc boinc        68 Jun  3 04:30 shared
[2025-06-03 08:37:06] -rw-r--r--. 2 boinc boinc    508872 Jun  3 04:30 input.tar.gz
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc         0 Jun  3 04:30 boinc_lockfile
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc      2521 Jun  3 04:31 pandaJob.out
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc    988073 Jun  3 04:34 agis_schedconf.cvmfs.json
[2025-06-03 08:37:06] drwx------. 4 boinc boinc      4096 Jun  3 04:34 pilot3
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc 182098478 Jun  3 08:20 HITS.45006595._006614.pool.root.1
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc       531 Jun  3 08:20 boinc_task_state.xml
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc      1014 Jun  3 08:21 memory_monitor_summary.json
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc   1603667 Jun  3 08:21 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc    378137 Jun  3 08:21 log.45006595._006614.job.log.tgz.1
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc        95 Jun  3 08:22 pilot_heartbeat.json
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc      7691 Jun  3 08:23 heartbeat.json
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc      4602 Jun  3 08:23 pilotlog.txt
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc   1173369 Jun  3 08:23 log.45006595._006614.job.log.1
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc       357 Jun  3 08:23 output.list
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc       620 Jun  3 08:23 runtime_log
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc   1566720 Jun  3 08:23 result.tar.gz
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc      8659 Jun  3 08:23 runtime_log.err
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc       656 Jun  3 08:23 KnkKDmddOg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6sfKDmJG7MJo.diag
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:37 boinc_mmap_file
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:37 wrapper_checkpoint.txt
[2025-06-03 08:37:06] -rw-r--r--. 1 boinc boinc     20489 Jun  3 08:37 stderr.txt
[2025-06-03 08:37:06] HITS file was successfully produced:
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc 182098478 Jun  3 08:20 shared/HITS.pool.root.1
[2025-06-03 08:37:06]  *** Contents of shared directory: ***
[2025-06-03 08:37:06] total 391364
[2025-06-03 08:37:06] -rw-r--r--. 2 boinc boinc 216555804 Jun  3 04:30 ATLAS.root_0
[2025-06-03 08:37:06] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:30 start_atlas.sh
[2025-06-03 08:37:06] -rw-r--r--. 2 boinc boinc    508872 Jun  3 04:30 input.tar.gz
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc 182098478 Jun  3 08:20 HITS.pool.root.1
[2025-06-03 08:37:06] -rw-------. 1 boinc boinc   1566720 Jun  3 08:23 result.tar.gz
08:37:08 (10044): run_atlas exited; CPU time 49205.607380
08:37:08 (10044): called boinc_finish(0)

</stderr_txt>
]]>

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