Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:56:12 (19030): wrapper (7.7.26015): starting
20:56:12 (19030): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:56:12] Arguments: --nthreads 8
[2025-06-02 20:56:12] Threads: 8
[2025-06-02 20:56:12] Checking for CVMFS
[2025-06-02 20:56:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:56:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:56:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:56:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:56:15] 2.11.2.0 28641 30731 91280 146716 3 16 14019551 25165825 4632 130560 0 16606165 99.833 18213032 1946 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 20:56:15] CVMFS is ok
[2025-06-02 20:56:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:56:15] Checking for apptainer binary...
[2025-06-02 20:56:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:56:15] Running /usr/bin/apptainer --version
[2025-06-02 20:56:16] apptainer version 1.3.2-1.el7
[2025-06-02 20:56:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 21:13:09] cg-vwn402.simple-grid.lan
[2025-06-02 21:13:09] apptainer works
[2025-06-02 21:13:09] Set ATHENA_PROC_NUMBER=8
[2025-06-02 21:13:09] Set ATHENA_CORE_NUMBER=8
[2025-06-02 21:13:10] Starting ATLAS job with PandaID=6677383838
[2025-06-02 21:13:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 01:19:29]  *** The last 200 lines of the pilot log: ***
[2025-06-03 01:19:29] 2025-06-02 23:14:37,355 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 01:19:29] 2025-06-02 23:14:37,355 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 01:19:29] 2025-06-02 23:14:37,360 | INFO     | fitting pss+swap vs Time
[2025-06-03 01:19:29] 2025-06-02 23:14:37,360 | INFO     | sum of square deviations: 4024149870.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,362 | INFO     | sum of deviations: 11226147565.999987
[2025-06-03 01:19:29] 2025-06-02 23:14:37,363 | INFO     | mean x: 1748898814.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,363 | INFO     | mean y: 2482672.085106383
[2025-06-03 01:19:29] 2025-06-02 23:14:37,363 | INFO     | -- intersect: -4876410211.684743
[2025-06-03 01:19:29] 2025-06-02 23:14:37,363 | INFO     | intersect: -4876410211.684743
[2025-06-03 01:19:29] 2025-06-02 23:14:37,363 | INFO     | chi2: 2.713890008279879
[2025-06-03 01:19:29] 2025-06-02 23:14:37,364 | INFO     | sum of square deviations: 3772712597.5
[2025-06-03 01:19:29] 2025-06-02 23:14:37,366 | INFO     | sum of deviations: 27127808857.999985
[2025-06-03 01:19:29] 2025-06-02 23:14:37,369 | INFO     | mean x: 1748898661.5
[2025-06-03 01:19:29] 2025-06-02 23:14:37,369 | INFO     | mean y: 2492146.8
[2025-06-03 01:19:29] 2025-06-02 23:14:37,369 | INFO     | -- intersect: -12573018808.532988
[2025-06-03 01:19:29] 2025-06-02 23:14:37,369 | INFO     | intersect: -12573018808.532988
[2025-06-03 01:19:29] 2025-06-02 23:14:37,370 | INFO     | chi2: 1.8776764181519021
[2025-06-03 01:19:29] 2025-06-02 23:14:37,370 | INFO     | current chi2=1.8776764181519021 (change=30.812361133898232 %)
[2025-06-03 01:19:29] 2025-06-02 23:14:37,370 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,372 | INFO     | sum of deviations: 26513029202.999996
[2025-06-03 01:19:29] 2025-06-02 23:14:37,372 | INFO     | mean x: 1748898509.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,372 | INFO     | mean y: 2491757.302222222
[2025-06-03 01:19:29] 2025-06-02 23:14:37,372 | INFO     | -- intersect: -13125749771.314178
[2025-06-03 01:19:29] 2025-06-02 23:14:37,372 | INFO     | intersect: -13125749771.314178
[2025-06-03 01:19:29] 2025-06-02 23:14:37,373 | INFO     | chi2: 1.8788168370466451
[2025-06-03 01:19:29] 2025-06-02 23:14:37,373 | INFO     | current chi2=1.8788168370466451 (change=-0.06073564559464874 %)
[2025-06-03 01:19:29] 2025-06-02 23:14:37,373 | INFO     | right removable region: 224
[2025-06-03 01:19:29] 2025-06-02 23:14:37,374 | INFO     | sum of square deviations: 3772712597.5
[2025-06-03 01:19:29] 2025-06-02 23:14:37,375 | INFO     | sum of deviations: -34405532686.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,376 | INFO     | mean x: 1748898966.5
[2025-06-03 01:19:29] 2025-06-02 23:14:37,376 | INFO     | mean y: 2510171.547826087
[2025-06-03 01:19:29] 2025-06-02 23:14:37,376 | INFO     | -- intersect: 15951724165.823565
[2025-06-03 01:19:29] 2025-06-02 23:14:37,376 | INFO     | intersect: 15951724165.823565
[2025-06-03 01:19:29] 2025-06-02 23:14:37,376 | INFO     | chi2: 0.9338229818381558
[2025-06-03 01:19:29] 2025-06-02 23:14:37,376 | INFO     | current chi2=0.9338229818381558 (change=65.59097903787071 %)
[2025-06-03 01:19:29] 2025-06-02 23:14:37,377 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,379 | INFO     | sum of deviations: -38249608176.99999
[2025-06-03 01:19:29] 2025-06-02 23:14:37,379 | INFO     | mean x: 1748899119.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,379 | INFO     | mean y: 2512572.56
[2025-06-03 01:19:29] 2025-06-02 23:14:37,379 | INFO     | -- intersect: 18942267280.4526
[2025-06-03 01:19:29] 2025-06-02 23:14:37,379 | INFO     | intersect: 18942267280.4526
[2025-06-03 01:19:29] 2025-06-02 23:14:37,379 | INFO     | chi2: 0.8998544778554003
[2025-06-03 01:19:29] 2025-06-02 23:14:37,380 | INFO     | current chi2=0.8998544778554003 (change=3.6375742130367414 %)
[2025-06-03 01:19:29] 2025-06-02 23:14:37,380 | INFO     | left removable region: 20
[2025-06-03 01:19:29] 2025-06-02 23:14:37,384 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,386 | INFO     | sum of deviations: -18462121286.0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,386 | INFO     | mean x: 1748899088.5
[2025-06-03 01:19:29] 2025-06-02 23:14:37,386 | INFO     | mean y: 2521275.1960784313
[2025-06-03 01:19:29] 2025-06-02 23:14:37,386 | INFO     | -- intersect: 12268094816.950232
[2025-06-03 01:19:29] 2025-06-02 23:14:37,386 | INFO     | intersect: 12268094816.950232
[2025-06-03 01:19:29] 2025-06-02 23:14:37,387 | INFO     | chi2: 0.03605551438143536
[2025-06-03 01:19:29] 2025-06-02 23:14:37,387 | INFO     | -- intersect: 12268094816.950232
[2025-06-03 01:19:29] 2025-06-02 23:14:37,387 | INFO     | current memory leak: -7.01 B/s (using 204 data points, chi2=0.04)
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | ..............................
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | . Timing measurements:
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | . get job = 0 s
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | . initial setup = 2 s
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | . payload setup = 14 s
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | . stage-in = 0 s
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | . payload execution = 14331 s
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | . stage-out = 1 s
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | . log creation = 0 s
[2025-06-03 01:19:29] 2025-06-02 23:14:37,388 | INFO     | ..............................
[2025-06-03 01:19:29] 2025-06-02 23:14:37,587 | INFO     | 
[2025-06-03 01:19:29] 2025-06-02 23:14:37,587 | INFO     | job summary report
[2025-06-03 01:19:29] 2025-06-02 23:14:37,587 | INFO     | --------------------------------------------------
[2025-06-03 01:19:29] 2025-06-02 23:14:37,587 | INFO     | PanDA job id: 6677383838
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | task id: 45006595
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | errors: (none)
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | pilot state: finished 
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | transexitcode: 0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | exeerrorcode: 0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | exeerrordiag: 
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | exitcode: 0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | exitmsg: OK
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | cpuconsumptiontime: 52914 s
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | nevents: 400
[2025-06-03 01:19:29] 2025-06-02 23:14:37,588 | INFO     | neventsw: 0
[2025-06-03 01:19:29] 2025-06-02 23:14:37,589 | INFO     | pid: 5795
[2025-06-03 01:19:29] 2025-06-02 23:14:37,589 | INFO     | pgrp: 5795
[2025-06-03 01:19:29] 2025-06-02 23:14:37,589 | INFO     | corecount: 8
[2025-06-03 01:19:29] 2025-06-02 23:14:37,589 | INFO     | event service: False
[2025-06-03 01:19:29] 2025-06-02 23:14:37,589 | INFO     | sizes: {0: 2405006, 1: 2405205, 10: 2405411, 12: 2405439, 14350: 2435351, 14351: 2435350, 14354: 2444475, 14356: 2444559, 14443: 2444729}
[2025-06-03 01:19:29] 2025-06-02 23:14:37,589 | INFO     | --------------------------------------------------
[2025-06-03 01:19:29] 2025-06-02 23:14:37,589 | INFO     | 
[2025-06-03 01:19:29] 2025-06-02 23:14:37,589 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-06-03 01:19:29] 2025-06-02 23:14:38,147 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,148 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,148 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,148 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,148 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,148 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,148 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,148 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,148 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,149 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 01:19:29] 2025-06-02 23:14:38,150 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,150 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 01:19:29] 2025-06-02 23:14:38,150 | INFO     | job 6677383838 has completed (purged errors)
[2025-06-03 01:19:29] 2025-06-02 23:14:38,150 | INFO     | overall cleanup function is called
[2025-06-03 01:19:29] 2025-06-02 23:14:38,650 | INFO     | PID=29655 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 01:19:29] 2025-06-02 23:14:38,651 | INFO     | .. there are 9 such processes running
[2025-06-03 01:19:29] 2025-06-02 23:14:39,159 | INFO     | --- collectZombieJob: --- 10, [5795]
[2025-06-03 01:19:29] 2025-06-02 23:14:39,159 | INFO     | zombie collector waiting for pid 5795
[2025-06-03 01:19:29] 2025-06-02 23:14:39,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 01:19:29] 2025-06-02 23:14:39,160 | INFO     | collected zombie processes
[2025-06-03 01:19:29] 2025-06-02 23:14:39,160 | INFO     | will attempt to kill all subprocesses of pid=5795
[2025-06-03 01:19:29] 2025-06-02 23:14:39,280 | INFO     | process IDs to be killed: [5795] (in reverse order)
[2025-06-03 01:19:29] 2025-06-02 23:14:39,939 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 01:19:29] 2025-06-02 23:14:39,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 01:19:29] 2025-06-02 23:14:39,943 | INFO     | did not find any defunct processes belonging to 5795
[2025-06-03 01:19:29] 2025-06-02 23:14:39,946 | INFO     | did not find any defunct processes belonging to 5795
[2025-06-03 01:19:29] 2025-06-02 23:14:39,946 | INFO     | ready for new job
[2025-06-03 01:19:29] 2025-06-02 23:14:39,946 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 01:19:29] 2025-06-02 23:14:39,948 | INFO     | **************************************
[2025-06-03 01:19:29] 2025-06-02 23:14:39,949 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 01:19:29] 2025-06-02 23:14:39,949 | INFO     | **************************************
[2025-06-03 01:19:29] 2025-06-02 23:14:39,949 | INFO     | 
[2025-06-03 01:19:29] 2025-06-02 23:14:39,950 | INFO     | pilot is running in a VM
[2025-06-03 01:19:29] 2025-06-02 23:14:39,950 | INFO     | architecture information:
[2025-06-03 01:19:29] 2025-06-02 23:14:39,951 | INFO     | executing command: cat /etc/os-release
[2025-06-03 01:19:29] 2025-06-02 23:14:40,147 | INFO     | cat /etc/os-release:
[2025-06-03 01:19:29] NAME="CentOS Linux"
[2025-06-03 01:19:29] VERSION="7 (Core)"
[2025-06-03 01:19:29] ID="centos"
[2025-06-03 01:19:29] ID_LIKE="rhel fedora"
[2025-06-03 01:19:29] VERSION_ID="7"
[2025-06-03 01:19:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 01:19:29] ANSI_COLOR="0;31"
[2025-06-03 01:19:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 01:19:29] HOME_URL="https://www.centos.org/"
[2025-06-03 01:19:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 01:19:29] 
[2025-06-03 01:19:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 01:19:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 01:19:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 01:19:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 01:19:29] 
[2025-06-03 01:19:29] 2025-06-02 23:14:40,148 | INFO     | **************************************
[2025-06-03 01:19:29] 2025-06-02 23:14:40,651 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-06-03 01:19:29] 2025-06-02 23:14:40,797 | INFO     | sufficient remaining disk space (496918069248 B)
[2025-06-03 01:19:29] 2025-06-02 23:14:40,797 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 01:19:29] 2025-06-02 23:14:40,797 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 01:19:29] 2025-06-02 23:14:40,798 | INFO     | update_server=False
[2025-06-03 01:19:29] 2025-06-02 23:14:40,798 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 01:19:29] 2025-06-02 23:14:40,801 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 01:19:29] 2025-06-02 23:14:40,802 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 01:19:29] 2025-06-02 23:14:40,802 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 01:19:29] 2025-06-02 23:14:40,802 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 01:19:29] 2025-06-02 23:14:41,272 | INFO     | all payload control threads have been joined
[2025-06-03 01:19:29] 2025-06-02 23:14:41,520 | INFO     | all data control threads have been joined
[2025-06-03 01:19:29] 2025-06-02 23:14:41,640 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 01:19:29] 2025-06-02 23:14:41,640 | INFO     | aborting loop
[2025-06-03 01:19:29] 2025-06-02 23:14:41,766 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 01:19:29] 2025-06-02 23:14:41,803 | INFO     | [job] retrieve thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:42,107 | INFO     | all job control threads have been joined
[2025-06-03 01:19:29] 2025-06-02 23:14:42,278 | INFO     | [payload] control thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:42,427 | INFO     | [job] validate thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:42,509 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:42,516 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:42,526 | INFO     | [data] control thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:42,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 01:19:29] 2025-06-02 23:14:42,624 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 01:19:29] 2025-06-02 23:14:42,645 | INFO     | [job] job monitor thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:42,744 | INFO     | [payload] failed_post thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:42,907 | INFO     | [payload] validate_post thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:43,113 | INFO     | [job] control thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:43,240 | INFO     | [data] copytool_in thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:43,246 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:43,630 | INFO     | [job] queue monitor thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:43,773 | INFO     | [data] copytool_out thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:46,596 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:51,384 | INFO     | job.realtimelogging is not enabled
[2025-06-03 01:19:29] 2025-06-02 23:14:52,390 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 01:19:29] 2025-06-02 23:14:53,984 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140304453306176)>', '<ExcThread(monitor, started 140303981844224)>']
[2025-06-03 01:19:29] 2025-06-02 23:14:54,886 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 01:19:29] 2025-06-02 23:14:54,886 | INFO     | [monitor] control thread has ended
[2025-06-03 01:19:29] 2025-06-02 23:14:59,010 | INFO     | all workflow threads have been joined
[2025-06-03 01:19:29] 2025-06-02 23:14:59,010 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 01:19:29] 2025-06-02 23:14:59,011 | INFO     | traces error code: 0
[2025-06-03 01:19:29] 2025-06-02 23:14:59,011 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 01:19:29] 2025-06-02 23:14:59,405 [wrapper] ==== pilot stdout END ====
[2025-06-03 01:19:29] 2025-06-02 23:14:59,482 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 01:19:29] 2025-06-02 23:14:59,520 [wrapper] pilotpid: 29655
[2025-06-03 01:19:29] 2025-06-02 23:14:59,556 [wrapper] Pilot exit status: 0
[2025-06-03 01:19:29] 2025-06-02 23:14:59,801 [wrapper] pandaids: 6677383838
[2025-06-03 01:19:29] 2025-06-02 23:15:00,127 [wrapper] cleanup supervisor_pilot 18889 29656
[2025-06-03 01:19:29] 2025-06-02 23:15:00,255 [wrapper] Test setup, not cleaning
[2025-06-03 01:19:29] 2025-06-02 23:15:00,350 [wrapper] apfmon messages muted
[2025-06-03 01:19:29] 2025-06-02 23:15:00,470 [wrapper] ==== wrapper stdout END ====
[2025-06-03 01:19:29] 2025-06-02 23:15:00,574 [wrapper] ==== wrapper stderr END ====
[2025-06-03 01:19:29]  *** Error codes and diagnostics ***
[2025-06-03 01:19:29]     "exeErrorCode": 0,
[2025-06-03 01:19:29]     "exeErrorDiag": "",
[2025-06-03 01:19:29]     "pilotErrorCode": 0,
[2025-06-03 01:19:29]     "pilotErrorDiag": "",
[2025-06-03 01:19:29]  *** Listing of results directory ***
[2025-06-03 01:19:29] total 406324
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc    495897 Jun  2 18:11 pilot3.tar.gz
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:28 queuedata.json
[2025-06-03 01:19:29] -rwx------. 1 boinc boinc     37140 Jun  2 18:30 runpilot2-wrapper.sh
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 01:19:29] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:56 run_atlas
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:56 job.xml
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc      6390 Jun  2 20:56 init_data.xml
[2025-06-03 01:19:29] -rw-r--r--. 2 boinc boinc 215250767 Jun  2 20:56 EVNT.45006593._000151.pool.root.1
[2025-06-03 01:19:29] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:56 start_atlas.sh
[2025-06-03 01:19:29] drwxrwx--x. 2 boinc boinc        68 Jun  2 20:56 shared
[2025-06-03 01:19:29] -rw-r--r--. 2 boinc boinc    508875 Jun  2 20:56 input.tar.gz
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:56 boinc_lockfile
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc      2521 Jun  2 21:13 pandaJob.out
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc    988298 Jun  2 21:13 agis_schedconf.cvmfs.json
[2025-06-03 01:19:29] drwx------. 4 boinc boinc      4096 Jun  2 21:13 pilot3
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc 193693184 Jun  3 01:11 HITS.45006595._003775.pool.root.1
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc       531 Jun  3 01:11 boinc_task_state.xml
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc      1020 Jun  3 01:13 memory_monitor_summary.json
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc   1603667 Jun  3 01:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc    401622 Jun  3 01:13 log.45006595._003775.job.log.tgz.1
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc        95 Jun  3 01:14 pilot_heartbeat.json
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc      7690 Jun  3 01:14 heartbeat.json
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc      4611 Jun  3 01:14 pilotlog.txt
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc   1251357 Jun  3 01:15 log.45006595._003775.job.log.1
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc       357 Jun  3 01:15 output.list
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc       620 Jun  3 01:15 runtime_log
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc   1669120 Jun  3 01:15 result.tar.gz
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc      8659 Jun  3 01:15 runtime_log.err
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc       657 Jun  3 01:15 LlaLDmkENg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmlPfKDm3t6Ufm.diag
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc      8192 Jun  3 01:19 boinc_mmap_file
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc        28 Jun  3 01:19 wrapper_checkpoint.txt
[2025-06-03 01:19:29] -rw-r--r--. 1 boinc boinc     20578 Jun  3 01:19 stderr.txt
[2025-06-03 01:19:29] HITS file was successfully produced:
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc 193693184 Jun  3 01:11 shared/HITS.pool.root.1
[2025-06-03 01:19:29]  *** Contents of shared directory: ***
[2025-06-03 01:19:29] total 401512
[2025-06-03 01:19:29] -rw-r--r--. 2 boinc boinc 215250767 Jun  2 20:56 ATLAS.root_0
[2025-06-03 01:19:29] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:56 start_atlas.sh
[2025-06-03 01:19:29] -rw-r--r--. 2 boinc boinc    508875 Jun  2 20:56 input.tar.gz
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc 193693184 Jun  3 01:11 HITS.pool.root.1
[2025-06-03 01:19:29] -rw-------. 1 boinc boinc   1669120 Jun  3 01:15 result.tar.gz
01:19:31 (19030): run_atlas exited; CPU time 53091.890067
01:19:31 (19030): called boinc_finish(0)

</stderr_txt>
]]>

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