Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:50:41 (3742147): wrapper (7.7.26015): starting
11:50:41 (3742147): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 11:50:41] Arguments: --nthreads 12
[2025-06-02 11:50:41] Threads: 12
[2025-06-02 11:50:41] Checking for CVMFS
[2025-06-02 11:50:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 11:50:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 11:50:42] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 11:50:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 11:50:43] 2.11.5.0 2557842 20778 190800 146716 0 636 45269267 45568000 12709 130560 0 154721651 99.783 114799012 26454 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 11:50:43] CVMFS is ok
[2025-06-02 11:50:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 11:50:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 11:50:43] Further information can be found at the LHC@home message board.
[2025-06-02 11:50:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 11:50:43] Checking for apptainer binary...
[2025-06-02 11:50:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 11:50:43] Running /usr/bin/apptainer --version
[2025-06-02 11:50:43] apptainer version 1.4.0-1.el9
[2025-06-02 11:50:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 11:50:43] wns0143.triumf.lcg
[2025-06-02 11:50:43] apptainer works
[2025-06-02 11:50:43] Set ATHENA_PROC_NUMBER=12
[2025-06-02 11:50:43] Set ATHENA_CORE_NUMBER=12
[2025-06-02 11:50:43] Starting ATLAS job with PandaID=6677384196
[2025-06-02 11:50:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 11:55:04]  *** The last 200 lines of the pilot log: ***
[2025-06-02 11:55:04] 2025-06-02 18:54:31,601 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 11:55:04] 2025-06-02 18:54:31,603 | WARNING  | wrong length of table data, x=[1748890310.0], y=[2014.0] (must be same and length>=4)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | could have reported an average CPU frequency of 2080 MHz (4 samples)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | ..............................
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . Timing measurements:
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . get job = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . initial setup = 4 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . payload setup = 14 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . stage-in = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . payload execution = 38 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . stage-out = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | . log creation = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | ..............................
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677384196/pilotlog.txt
[2025-06-02 11:55:04] 2025-06-02 18:54:31,621 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 11:55:04] - Log from pilotlog.txt -
[2025-06-02 11:55:04] 2025-06-02 18:54:31,600 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677384196/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,601 | INFO     | extracted standard info from prmon json
[2025-06-02 11:55:04] 2025-06-02 18:54:31,601 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 11:55:04] 2025-06-02 18:54:31,603 | WARNING  | wrong length of table data, x=[1748890310.0], y=[2014.0] (must be same and length>=4)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | could have reported an average CPU frequency of 2080 MHz (4 samples)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | ..............................
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . Timing measurements:
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . get job = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . initial setup = 4 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . payload setup = 14 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . stage-in = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . payload execution = 38 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . stage-out = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | . log creation = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | ..............................
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677384196/pilotlog.txt
[2025-06-02 11:55:04] 2025-06-02 18:54:31,622 | WARNING  | 
[2025-06-02 11:55:04] [begin log extracts]
[2025-06-02 11:55:04] - Log from pilotlog.txt -
[2025-06-02 11:55:04] 2025-06-02 18:54:31,600 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6677384196/memory_monitor_summary.json (trf name=prmon)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,601 | INFO     | extracted standard info from prmon json
[2025-06-02 11:55:04] 2025-06-02 18:54:31,601 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 11:55:04] 2025-06-02 18:54:31,602 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 11:55:04] 2025-06-02 18:54:31,603 | WARNING  | wrong length of table data, x=[1748890310.0], y=[2014.0] (must be same and length>=4)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | could have reported an average CPU frequency of 2080 MHz (4 samples)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | ..............................
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . Timing measurements:
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . get job = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . initial setup = 4 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . payload setup = 14 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . stage-in = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . payload execution = 38 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,604 | INFO     | . stage-out = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | . log creation = 0 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | ..............................
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 11:55:04] 2025-06-02 18:54:31,605 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677384196/pilotlog.txt
[2025-06-02 11:55:04] [end log extracts]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,622 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,623 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 11:55:04] 2025-06-02 18:54:31,701 | INFO     | 
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | job summary report
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | --------------------------------------------------
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | PanDA job id: 6677384196
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | task id: 45006595
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 11:52:12,344 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | pilot state: failed 
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | transexitcode: 65
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | exeerrorcode: 65
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | exitcode: 65
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | cpuconsumptiontime: 19 s
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | nevents: 0
[2025-06-02 11:55:04] 2025-06-02 18:54:31,702 | INFO     | neventsw: 0
[2025-06-02 11:55:04] 2025-06-02 18:54:31,703 | INFO     | pid: 3762452
[2025-06-02 11:55:04] 2025-06-02 18:54:31,703 | INFO     | pgrp: 3762452
[2025-06-02 11:55:04] 2025-06-02 18:54:31,703 | INFO     | corecount: 12
[2025-06-02 11:55:04] 2025-06-02 18:54:31,703 | INFO     | event service: False
[2025-06-02 11:55:04] 2025-06-02 18:54:31,703 | INFO     | sizes: {0: 2405515, 8: 2405777, 11: 2405805, 56: 2429059, 57: 2433294, 61: 2433322, 187: 2433616}
[2025-06-02 11:55:04] 2025-06-02 18:54:31,703 | INFO     | --------------------------------------------------
[2025-06-02 11:55:04] 2025-06-02 18:54:31,703 | INFO     | 
[2025-06-02 11:55:04] 2025-06-02 18:54:31,703 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 11:55:04] 2025-06-02 18:54:31,724 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,724 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,724 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,724 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,725 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,726 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,726 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 11:55:04] 2025-06-02 18:54:31,726 | INFO     | job 6677384196 has completed (purged errors)
[2025-06-02 11:55:04] 2025-06-02 18:54:31,726 | INFO     | overall cleanup function is called
[2025-06-02 11:55:04] 2025-06-02 18:54:32,732 | INFO     | --- collectZombieJob: --- 10, [3762452]
[2025-06-02 11:55:04] 2025-06-02 18:54:32,733 | INFO     | zombie collector waiting for pid 3762452
[2025-06-02 11:55:04] 2025-06-02 18:54:32,733 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 11:55:04] 2025-06-02 18:54:32,733 | INFO     | collected zombie processes
[2025-06-02 11:55:04] 2025-06-02 18:54:32,733 | INFO     | will attempt to kill all subprocesses of pid=3762452
[2025-06-02 11:55:04] 2025-06-02 18:54:32,917 | INFO     | process IDs to be killed: [3762452] (in reverse order)
[2025-06-02 11:55:04] 2025-06-02 18:54:33,001 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 11:55:04] 2025-06-02 18:54:33,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 11:55:04] 2025-06-02 18:54:33,011 | INFO     | did not find any defunct processes belonging to 3762452
[2025-06-02 11:55:04] 2025-06-02 18:54:33,021 | INFO     | did not find any defunct processes belonging to 3762452
[2025-06-02 11:55:04] 2025-06-02 18:54:33,021 | INFO     | ready for new job
[2025-06-02 11:55:04] 2025-06-02 18:54:33,021 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 11:55:04] 2025-06-02 18:54:33,023 | INFO     | ***************************************
[2025-06-02 11:55:04] 2025-06-02 18:54:33,024 | INFO     | ***  PanDA Pilot version 3.10.3.82  ***
[2025-06-02 11:55:04] 2025-06-02 18:54:33,024 | INFO     | ***************************************
[2025-06-02 11:55:04] 2025-06-02 18:54:33,024 | INFO     | 
[2025-06-02 11:55:04] 2025-06-02 18:54:33,027 | INFO     | architecture information:
[2025-06-02 11:55:04] 2025-06-02 18:54:33,027 | INFO     | executing command: cat /etc/os-release
[2025-06-02 11:55:04] 2025-06-02 18:54:33,044 | INFO     | cat /etc/os-release:
[2025-06-02 11:55:04] NAME="CentOS Linux"
[2025-06-02 11:55:04] VERSION="7 (Core)"
[2025-06-02 11:55:04] ID="centos"
[2025-06-02 11:55:04] ID_LIKE="rhel fedora"
[2025-06-02 11:55:04] VERSION_ID="7"
[2025-06-02 11:55:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 11:55:04] ANSI_COLOR="0;31"
[2025-06-02 11:55:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 11:55:04] HOME_URL="https://www.centos.org/"
[2025-06-02 11:55:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 11:55:04] 
[2025-06-02 11:55:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 11:55:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 11:55:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 11:55:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 11:55:04] 
[2025-06-02 11:55:04] 2025-06-02 18:54:33,045 | INFO     | ***************************************
[2025-06-02 11:55:04] 2025-06-02 18:54:33,548 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 11:55:04] 2025-06-02 18:54:33,571 | INFO     | sufficient remaining disk space (2081781972992 B)
[2025-06-02 11:55:04] 2025-06-02 18:54:33,571 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 11:55:04] 2025-06-02 18:54:33,571 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 11:55:04] 2025-06-02 18:54:33,571 | INFO     | update_server=False
[2025-06-02 11:55:04] 2025-06-02 18:54:33,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 11:55:04] 2025-06-02 18:54:33,572 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 11:55:04] 2025-06-02 18:54:33,572 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 11:55:04] 2025-06-02 18:54:34,408 | INFO     | all data control threads have been joined
[2025-06-02 11:55:04] 2025-06-02 18:54:34,477 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 11:55:04] 2025-06-02 18:54:34,478 | INFO     | aborting loop
[2025-06-02 11:55:04] 2025-06-02 18:54:34,577 | INFO     | all payload control threads have been joined
[2025-06-02 11:55:04] 2025-06-02 18:54:34,578 | INFO     | [job] retrieve thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:34,582 | INFO     | [job] queue monitor thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:34,582 | INFO     | [data] copytool_in thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:34,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:34,609 | INFO     | [payload] validate_post thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:34,999 | INFO     | all job control threads have been joined
[2025-06-02 11:55:04] 2025-06-02 18:54:35,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 11:55:04] 2025-06-02 18:54:35,417 | INFO     | [data] control thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:35,483 | INFO     | [job] job monitor thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:35,525 | INFO     | [payload] failed_post thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:35,564 | INFO     | [job] validate thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:35,583 | INFO     | [payload] control thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:35,762 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:35,907 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:36,005 | INFO     | [job] control thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:36,035 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:37,009 | INFO     | [data] copytool_out thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:37,586 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 11:55:04] 2025-06-02 18:54:37,763 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140177920878400)>', '<ExcThread(monitor, started 140177397774080)>']
[2025-06-02 11:55:04] 2025-06-02 18:54:42,788 | INFO     | all workflow threads have been joined
[2025-06-02 11:55:04] 2025-06-02 18:54:42,788 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 11:55:04] 2025-06-02 18:54:42,789 | INFO     | traces error code: 0
[2025-06-02 11:55:04] 2025-06-02 18:54:42,789 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 11:55:04] 2025-06-02 18:55:03,691 | INFO     | PID=3749016 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-02 11:55:04] 2025-06-02 18:55:03,691 | INFO     | .. there are 14 such processes running
[2025-06-02 11:55:04] 2025-06-02 18:55:03,691 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 11:55:04] 2025-06-02 18:55:03,691 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 11:55:04] 2025-06-02 18:55:03,691 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 11:55:04] 2025-06-02 18:55:03,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 11:55:04] 2025-06-02 18:55:03,692 | INFO     | [monitor] control thread has ended
[2025-06-02 11:55:04] 2025-06-02 18:55:03,818 [wrapper] ==== pilot stdout END ====
[2025-06-02 11:55:04] 2025-06-02 18:55:03,821 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 11:55:04] 2025-06-02 18:55:03,823 [wrapper] pilotpid: 3749016
[2025-06-02 11:55:04] 2025-06-02 18:55:03,825 [wrapper] Pilot exit status: 0
[2025-06-02 11:55:04] 2025-06-02 18:55:03,837 [wrapper] pandaids: 6677384196
[2025-06-02 11:55:04] 2025-06-02 18:55:03,920 [wrapper] cleanup supervisor_pilot 3749024 3749017
[2025-06-02 11:55:04] 2025-06-02 18:55:03,929 [wrapper] Test setup, not cleaning
[2025-06-02 11:55:04] 2025-06-02 18:55:03,942 [wrapper] apfmon messages muted
[2025-06-02 11:55:04] 2025-06-02 18:55:03,949 [wrapper] ==== wrapper stdout END ====
[2025-06-02 11:55:04] 2025-06-02 18:55:03,987 [wrapper] ==== wrapper stderr END ====
[2025-06-02 11:55:04]  *** Error codes and diagnostics ***
[2025-06-02 11:55:04]     "exeErrorCode": 65,
[2025-06-02 11:55:04]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 11:55:04]     "pilotErrorCode": 1305,
[2025-06-02 11:55:04]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 11:55:04]  *** Listing of results directory ***
[2025-06-02 11:55:04] total 212768
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc    549845 Jun  2 02:40 pilot3.tar.gz
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc      5111 Jun  2 09:38 queuedata.json
[2025-06-02 11:55:04] -rwx------. 1 boinc boinc     37140 Jun  2 09:38 runpilot2-wrapper.sh
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc       100 Jun  2 11:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 11:55:04] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 11:50 run_atlas
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc       105 Jun  2 11:50 job.xml
[2025-06-02 11:55:04] -rw-r--r--. 2 boinc boinc 213728769 Jun  2 11:50 EVNT.45006593._000161.pool.root.1
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc      6597 Jun  2 11:50 init_data.xml
[2025-06-02 11:55:04] -rw-r--r--. 2 boinc boinc     15093 Jun  2 11:50 start_atlas.sh
[2025-06-02 11:55:04] drwxrwx--x. 2 boinc boinc      4096 Jun  2 11:50 shared
[2025-06-02 11:55:04] -rw-r--r--. 2 boinc boinc    564114 Jun  2 11:50 input.tar.gz
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc         0 Jun  2 11:50 boinc_lockfile
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc      2521 Jun  2 11:50 pandaJob.out
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc    988298 Jun  2 11:51 agis_schedconf.cvmfs.json
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc   1603667 Jun  2 11:51 agis_ddmendpoints.agis.ALL.json
[2025-06-02 11:55:04] drwx------. 6 boinc boinc      4096 Jun  2 11:51 pilot3
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc       522 Jun  2 11:52 boinc_task_state.xml
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc       955 Jun  2 11:52 memory_monitor_summary.json
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc     21186 Jun  2 11:52 log.45006595._004016.job.log.tgz.1
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc        95 Jun  2 11:54 pilot_heartbeat.json
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc      8368 Jun  2 11:54 heartbeat.json
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc        22 Jun  2 11:54 wrapper_checkpoint.txt
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc      8192 Jun  2 11:55 boinc_mmap_file
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc       823 Jun  2 11:55 pilotlog.txt
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc     83041 Jun  2 11:55 log.45006595._004016.job.log.1
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc       188 Jun  2 11:55 output.list
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc       620 Jun  2 11:55 runtime_log
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc    122880 Jun  2 11:55 result.tar.gz
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc       644 Jun  2 11:55 xGcNDmvLNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmHSfKDm5Cxyrn.diag
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc      8484 Jun  2 11:55 runtime_log.err
[2025-06-02 11:55:04] -rw-r--r--. 1 boinc boinc     21794 Jun  2 11:55 stderr.txt
[2025-06-02 11:55:04] No HITS result produced
[2025-06-02 11:55:04]  *** Contents of shared directory: ***
[2025-06-02 11:55:04] total 209408
[2025-06-02 11:55:04] -rw-r--r--. 2 boinc boinc 213728769 Jun  2 11:50 ATLAS.root_0
[2025-06-02 11:55:04] -rw-r--r--. 2 boinc boinc     15093 Jun  2 11:50 start_atlas.sh
[2025-06-02 11:55:04] -rw-r--r--. 2 boinc boinc    564114 Jun  2 11:50 input.tar.gz
[2025-06-02 11:55:04] -rw-------. 1 boinc boinc    122880 Jun  2 11:55 result.tar.gz
11:55:05 (3742147): run_atlas exited; CPU time 26.165019
11:55:05 (3742147): called boinc_finish(0)

</stderr_txt>
]]>

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