Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:55:23 (10287): wrapper (7.7.26015): starting
00:55:23 (10287): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:55:23] Arguments: --nthreads 8
[2025-06-03 00:55:23] Threads: 8
[2025-06-03 00:55:23] Checking for CVMFS
[2025-06-03 00:55:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:55:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:55:24] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:55:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:55:24] 2.11.2.0 5632 30949 94792 146722 1 114 14682485 25165824 4099 130560 0 15481507 99.818 17802392 2070 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 00:55:24] CVMFS is ok
[2025-06-03 00:55:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:55:24] Checking for apptainer binary...
[2025-06-03 00:55:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:55:24] Running /usr/bin/apptainer --version
[2025-06-03 00:55:24] apptainer version 1.3.2-1.el7
[2025-06-03 00:55:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 00:55:26] cg-vwn252.simple-grid.lan
[2025-06-03 00:55:26] apptainer works
[2025-06-03 00:55:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 00:55:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 00:55:26] Starting ATLAS job with PandaID=6677382351
[2025-06-03 00:55:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:17:21]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:17:21] 2025-06-03 02:46:15,233 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-6677382351/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,233 | INFO     | extracted standard info from prmon json
[2025-06-03 09:17:21] 2025-06-03 02:46:15,234 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:17:21] 2025-06-03 02:46:15,234 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:17:21] 2025-06-03 02:46:15,234 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:17:21] 2025-06-03 02:46:15,234 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:17:21] 2025-06-03 02:46:15,239 | INFO     | fitting pss+swap vs Time
[2025-06-03 09:17:21] 2025-06-03 02:46:15,240 | INFO     | sum of square deviations: 3531973200.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,246 | INFO     | sum of deviations: -43642377714.999985
[2025-06-03 09:17:21] 2025-06-03 02:46:15,246 | INFO     | mean x: 1748911832.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,246 | INFO     | mean y: 2525022.6533333333
[2025-06-03 09:17:21] 2025-06-03 02:46:15,246 | INFO     | -- intersect: 21612731680.61342
[2025-06-03 09:17:21] 2025-06-03 02:46:15,246 | INFO     | intersect: 21612731680.61342
[2025-06-03 09:17:21] 2025-06-03 02:46:15,247 | INFO     | chi2: 2.6971132394856374
[2025-06-03 09:17:21] 2025-06-03 02:46:15,247 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,249 | INFO     | sum of deviations: -27585807807.499992
[2025-06-03 09:17:21] 2025-06-03 02:46:15,249 | INFO     | mean x: 1748911679.5
[2025-06-03 09:17:21] 2025-06-03 02:46:15,249 | INFO     | mean y: 2535479.9954545456
[2025-06-03 09:17:21] 2025-06-03 02:46:15,249 | INFO     | -- intersect: 14614751730.651302
[2025-06-03 09:17:21] 2025-06-03 02:46:15,249 | INFO     | intersect: 14614751730.651302
[2025-06-03 09:17:21] 2025-06-03 02:46:15,249 | INFO     | chi2: 1.9317450557068272
[2025-06-03 09:17:21] 2025-06-03 02:46:15,250 | INFO     | current chi2=1.9317450557068272 (change=28.37730995398519 %)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,250 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,252 | INFO     | sum of deviations: -26506665988.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,252 | INFO     | mean x: 1748911527.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,252 | INFO     | mean y: 2536228.0139534883
[2025-06-03 09:17:21] 2025-06-03 02:46:15,252 | INFO     | -- intersect: 15045677614.32066
[2025-06-03 09:17:21] 2025-06-03 02:46:15,252 | INFO     | intersect: 15045677614.32066
[2025-06-03 09:17:21] 2025-06-03 02:46:15,253 | INFO     | chi2: 1.9298384234780632
[2025-06-03 09:17:21] 2025-06-03 02:46:15,253 | INFO     | current chi2=1.9298384234780632 (change=0.0986999926895805 %)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,253 | INFO     | right removable region: 214
[2025-06-03 09:17:21] 2025-06-03 02:46:15,253 | INFO     | sum of square deviations: 3301699115.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,255 | INFO     | sum of deviations: -82881663281.49998
[2025-06-03 09:17:21] 2025-06-03 02:46:15,255 | INFO     | mean x: 1748911984.5
[2025-06-03 09:17:21] 2025-06-03 02:46:15,255 | INFO     | mean y: 2550790.340909091
[2025-06-03 09:17:21] 2025-06-03 02:46:15,255 | INFO     | -- intersect: 43905017114.35327
[2025-06-03 09:17:21] 2025-06-03 02:46:15,255 | INFO     | intersect: 43905017114.35327
[2025-06-03 09:17:21] 2025-06-03 02:46:15,256 | INFO     | chi2: 1.0408475097540388
[2025-06-03 09:17:21] 2025-06-03 02:46:15,256 | INFO     | current chi2=1.0408475097540388 (change=61.40883169026535 %)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,256 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,258 | INFO     | sum of deviations: -83679711244.99997
[2025-06-03 09:17:21] 2025-06-03 02:46:15,258 | INFO     | mean x: 1748912137.0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,258 | INFO     | mean y: 2551308.0651162793
[2025-06-03 09:17:21] 2025-06-03 02:46:15,258 | INFO     | -- intersect: 47492724800.67007
[2025-06-03 09:17:21] 2025-06-03 02:46:15,258 | INFO     | intersect: 47492724800.67007
[2025-06-03 09:17:21] 2025-06-03 02:46:15,258 | INFO     | chi2: 1.0080750868059942
[2025-06-03 09:17:21] 2025-06-03 02:46:15,259 | INFO     | current chi2=1.0080750868059942 (change=3.148628655103283 %)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,259 | INFO     | left removable region: 20
[2025-06-03 09:17:21] 2025-06-03 02:46:15,259 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 09:17:21] 2025-06-03 02:46:15,266 | INFO     | sum of deviations: -54723001942.5
[2025-06-03 09:17:21] 2025-06-03 02:46:15,266 | INFO     | mean x: 1748912106.5
[2025-06-03 09:17:21] 2025-06-03 02:46:15,266 | INFO     | mean y: 2555966.4175257734
[2025-06-03 09:17:21] 2025-06-03 02:46:15,266 | INFO     | -- intersect: 42275824001.11913
[2025-06-03 09:17:21] 2025-06-03 02:46:15,266 | INFO     | intersect: 42275824001.11913
[2025-06-03 09:17:21] 2025-06-03 02:46:15,267 | INFO     | chi2: 0.2053211455614553
[2025-06-03 09:17:21] 2025-06-03 02:46:15,267 | INFO     | -- intersect: 42275824001.11913
[2025-06-03 09:17:21] 2025-06-03 02:46:15,267 | INFO     | current memory leak: -24.17 B/s (using 194 data points, chi2=0.21)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,268 | INFO     | ..............................
[2025-06-03 09:17:21] 2025-06-03 02:46:15,268 | INFO     | . Timing measurements:
[2025-06-03 09:17:21] 2025-06-03 02:46:15,268 | INFO     | . get job = 0 s
[2025-06-03 09:17:21] 2025-06-03 02:46:15,268 | INFO     | . initial setup = 2 s
[2025-06-03 09:17:21] 2025-06-03 02:46:15,268 | INFO     | . payload setup = 13 s
[2025-06-03 09:17:21] 2025-06-03 02:46:15,268 | INFO     | . stage-in = 0 s
[2025-06-03 09:17:21] 2025-06-03 02:46:15,269 | INFO     | . payload execution = 13699 s
[2025-06-03 09:17:21] 2025-06-03 02:46:15,269 | INFO     | . stage-out = 3 s
[2025-06-03 09:17:21] 2025-06-03 02:46:15,269 | INFO     | . log creation = 1 s
[2025-06-03 09:17:21] 2025-06-03 02:46:15,269 | INFO     | ..............................
[2025-06-03 09:17:21] 2025-06-03 02:46:15,393 | INFO     | 
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | job summary report
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | --------------------------------------------------
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | PanDA job id: 6677382351
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | task id: 45006595
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | errors: (none)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | pilot state: finished 
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | transexitcode: 0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | exeerrorcode: 0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | exeerrordiag: 
[2025-06-03 09:17:21] 2025-06-03 02:46:15,394 | INFO     | exitcode: 0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | exitmsg: OK
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | cpuconsumptiontime: 50771 s
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | nevents: 400
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | neventsw: 0
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | pid: 22514
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | pgrp: 22514
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | corecount: 8
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | event service: False
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | sizes: {0: 2405007, 1: 2405206, 9: 2405412, 12: 2405440, 13715: 2435130, 13716: 2435129, 13719: 2444256, 13721: 2444312, 13810: 2444482}
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | --------------------------------------------------
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | 
[2025-06-03 09:17:21] 2025-06-03 02:46:15,395 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2025-06-03 09:17:21] 2025-06-03 02:46:15,715 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,715 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,715 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,716 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,717 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,717 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,717 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,717 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,717 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:17:21] 2025-06-03 02:46:15,717 | INFO     | job 6677382351 has completed (purged errors)
[2025-06-03 09:17:21] 2025-06-03 02:46:15,717 | INFO     | overall cleanup function is called
[2025-06-03 09:17:21] 2025-06-03 02:46:16,725 | INFO     | --- collectZombieJob: --- 10, [22514]
[2025-06-03 09:17:21] 2025-06-03 02:46:16,726 | INFO     | zombie collector waiting for pid 22514
[2025-06-03 09:17:21] 2025-06-03 02:46:16,726 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:17:21] 2025-06-03 02:46:16,726 | INFO     | collected zombie processes
[2025-06-03 09:17:21] 2025-06-03 02:46:16,726 | INFO     | will attempt to kill all subprocesses of pid=22514
[2025-06-03 09:17:21] 2025-06-03 02:46:16,829 | INFO     | process IDs to be killed: [22514] (in reverse order)
[2025-06-03 09:17:21] 2025-06-03 02:46:17,213 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:17:21] 2025-06-03 02:46:17,214 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:17:21] 2025-06-03 02:46:17,217 | INFO     | did not find any defunct processes belonging to 22514
[2025-06-03 09:17:21] 2025-06-03 02:46:17,220 | INFO     | did not find any defunct processes belonging to 22514
[2025-06-03 09:17:21] 2025-06-03 02:46:17,221 | INFO     | ready for new job
[2025-06-03 09:17:21] 2025-06-03 02:46:17,221 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:17:21] 2025-06-03 02:46:17,223 | INFO     | **************************************
[2025-06-03 09:17:21] 2025-06-03 02:46:17,223 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:17:21] 2025-06-03 02:46:17,223 | INFO     | **************************************
[2025-06-03 09:17:21] 2025-06-03 02:46:17,223 | INFO     | 
[2025-06-03 09:17:21] 2025-06-03 02:46:17,224 | INFO     | pilot is running in a VM
[2025-06-03 09:17:21] 2025-06-03 02:46:17,224 | INFO     | architecture information:
[2025-06-03 09:17:21] 2025-06-03 02:46:17,227 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:17:21] 2025-06-03 02:46:17,449 | INFO     | cat /etc/os-release:
[2025-06-03 09:17:21] NAME="CentOS Linux"
[2025-06-03 09:17:21] VERSION="7 (Core)"
[2025-06-03 09:17:21] ID="centos"
[2025-06-03 09:17:21] ID_LIKE="rhel fedora"
[2025-06-03 09:17:21] VERSION_ID="7"
[2025-06-03 09:17:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:17:21] ANSI_COLOR="0;31"
[2025-06-03 09:17:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:17:21] HOME_URL="https://www.centos.org/"
[2025-06-03 09:17:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:17:21] 
[2025-06-03 09:17:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:17:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:17:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:17:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:17:21] 
[2025-06-03 09:17:21] 2025-06-03 02:46:17,449 | INFO     | **************************************
[2025-06-03 09:17:21] 2025-06-03 02:46:17,953 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2025-06-03 09:17:21] 2025-06-03 02:46:18,106 | INFO     | sufficient remaining disk space (497073258496 B)
[2025-06-03 09:17:21] 2025-06-03 02:46:18,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:17:21] 2025-06-03 02:46:18,107 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:17:21] 2025-06-03 02:46:18,107 | INFO     | update_server=False
[2025-06-03 09:17:21] 2025-06-03 02:46:18,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:17:21] 2025-06-03 02:46:18,108 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:17:21] 2025-06-03 02:46:18,112 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:17:21] 2025-06-03 02:46:18,157 | INFO     | all job control threads have been joined
[2025-06-03 09:17:21] 2025-06-03 02:46:18,160 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:17:21] 2025-06-03 02:46:18,161 | INFO     | aborting loop
[2025-06-03 09:17:21] 2025-06-03 02:46:18,452 | INFO     | all data control threads have been joined
[2025-06-03 09:17:21] 2025-06-03 02:46:18,714 | INFO     | all payload control threads have been joined
[2025-06-03 09:17:21] 2025-06-03 02:46:19,098 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:17:21] 2025-06-03 02:46:19,099 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:17:21] 2025-06-03 02:46:19,099 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:17:21] 2025-06-03 02:46:19,114 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,163 | INFO     | [job] control thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,167 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,251 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,375 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,458 | INFO     | [data] control thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,516 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,720 | INFO     | [payload] control thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,761 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,846 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:19,934 | INFO     | [job] validate thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:20,078 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:20,114 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:20,279 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:20,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:17:21] 2025-06-03 02:46:21,414 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:22,124 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:17:21] 2025-06-03 02:46:23,897 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139993038468928)>', '<ExcThread(monitor, started 139992303134464)>']
[2025-06-03 09:17:21] 2025-06-03 02:46:24,128 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:17:21] 2025-06-03 02:46:24,129 | INFO     | [monitor] control thread has ended
[2025-06-03 09:17:21] 2025-06-03 02:46:28,922 | INFO     | all workflow threads have been joined
[2025-06-03 09:17:21] 2025-06-03 02:46:28,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:17:21] 2025-06-03 02:46:28,923 | INFO     | traces error code: 0
[2025-06-03 09:17:21] 2025-06-03 02:46:28,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:17:21] 2025-06-03 02:46:29,216 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:17:21] 2025-06-03 02:46:29,272 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:17:21] 2025-06-03 02:46:29,409 [wrapper] pilotpid: 13959
[2025-06-03 09:17:21] 2025-06-03 02:46:29,531 [wrapper] Pilot exit status: 0
[2025-06-03 09:17:21] 2025-06-03 02:46:30,107 [wrapper] pandaids: 6677382351
[2025-06-03 09:17:21] 2025-06-03 02:46:30,907 [wrapper] cleanup supervisor_pilot 20202 13960
[2025-06-03 09:17:21] 2025-06-03 02:46:31,019 [wrapper] Test setup, not cleaning
[2025-06-03 09:17:21] 2025-06-03 02:46:31,132 [wrapper] apfmon messages muted
[2025-06-03 09:17:21] 2025-06-03 02:46:31,246 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:17:21] 2025-06-03 02:46:31,391 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:17:21]  *** Error codes and diagnostics ***
[2025-06-03 09:17:21]     "exeErrorCode": 0,
[2025-06-03 09:17:21]     "exeErrorDiag": "",
[2025-06-03 09:17:21]     "pilotErrorCode": 0,
[2025-06-03 09:17:21]     "pilotErrorDiag": "",
[2025-06-03 09:17:21]  *** Listing of results directory ***
[2025-06-03 09:17:21] total 391408
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-03 09:17:21] -rwx------. 1 boinc boinc     37140 Jun  2 18:02 runpilot2-wrapper.sh
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:17:21] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:55 run_atlas
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:55 job.xml
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc      6391 Jun  3 00:55 init_data.xml
[2025-06-03 09:17:21] -rw-r--r--. 2 boinc boinc 214058889 Jun  3 00:55 EVNT.45006593._000122.pool.root.1
[2025-06-03 09:17:21] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:55 start_atlas.sh
[2025-06-03 09:17:21] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:55 shared
[2025-06-03 09:17:21] -rw-r--r--. 2 boinc boinc    508875 Jun  3 00:55 input.tar.gz
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:55 boinc_lockfile
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc      2521 Jun  3 00:55 pandaJob.out
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc    988091 Jun  3 00:55 agis_schedconf.cvmfs.json
[2025-06-03 09:17:21] drwx------. 4 boinc boinc      4096 Jun  3 00:55 pilot3
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc 179764432 Jun  3 04:43 HITS.45006595._003034.pool.root.1
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc       531 Jun  3 04:44 boinc_task_state.xml
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc      1020 Jun  3 04:44 memory_monitor_summary.json
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc   1603667 Jun  3 04:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc    377817 Jun  3 04:44 log.45006595._003034.job.log.tgz.1
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc        95 Jun  3 04:46 pilot_heartbeat.json
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc      7691 Jun  3 04:46 heartbeat.json
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc      4417 Jun  3 04:46 pilotlog.txt
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc   1197153 Jun  3 04:46 log.45006595._003034.job.log.1
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc       357 Jun  3 04:46 output.list
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc       620 Jun  3 04:46 runtime_log
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc   1597440 Jun  3 04:46 result.tar.gz
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc      8673 Jun  3 04:46 runtime_log.err
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc       656 Jun  3 04:46 FXpLDmqnMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmCHfKDm7BXVUo.diag
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc      8192 Jun  3 09:17 boinc_mmap_file
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc        28 Jun  3 09:17 wrapper_checkpoint.txt
[2025-06-03 09:17:21] -rw-r--r--. 1 boinc boinc     20505 Jun  3 09:17 stderr.txt
[2025-06-03 09:17:21] HITS file was successfully produced:
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc 179764432 Jun  3 04:43 shared/HITS.pool.root.1
[2025-06-03 09:17:21]  *** Contents of shared directory: ***
[2025-06-03 09:17:21] total 386672
[2025-06-03 09:17:21] -rw-r--r--. 2 boinc boinc 214058889 Jun  3 00:55 ATLAS.root_0
[2025-06-03 09:17:21] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:55 start_atlas.sh
[2025-06-03 09:17:21] -rw-r--r--. 2 boinc boinc    508875 Jun  3 00:55 input.tar.gz
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc 179764432 Jun  3 04:43 HITS.pool.root.1
[2025-06-03 09:17:21] -rw-------. 1 boinc boinc   1597440 Jun  3 04:46 result.tar.gz
09:17:23 (10287): run_atlas exited; CPU time 50940.639865
09:17:23 (10287): called boinc_finish(0)

</stderr_txt>
]]>

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