Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:00:05 (2789848): wrapper (7.7.26015): starting
22:00:05 (2789848): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 22:00:05] Arguments: --nthreads 4
[2025-06-04 22:00:05] Threads: 4
[2025-06-04 22:00:05] Checking for CVMFS
[2025-06-04 22:00:05] No cvmfs_config command found, will try listing directly
[2025-06-04 22:00:05] CVMFS is ok
[2025-06-04 22:00:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 22:00:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 22:00:05] Further information can be found at the LHC@home message board.
[2025-06-04 22:00:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 22:00:05] Checking for apptainer binary...
[2025-06-04 22:00:05] which: no apptainer in ((null))
[2025-06-04 22:00:05] apptainer is not installed, using version from CVMFS
[2025-06-04 22:00:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 22:00:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut33.grid.cesnet.cz
[2025-06-04 22:00:05] apptainer works
[2025-06-04 22:00:05] Set ATHENA_PROC_NUMBER=4
[2025-06-04 22:00:05] Set ATHENA_CORE_NUMBER=4
[2025-06-04 22:00:05] Starting ATLAS job with PandaID=6677377704
[2025-06-04 22:00:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-05 01:08:01]  *** The last 200 lines of the pilot log: ***
[2025-06-05 01:08:01] 2025-06-04 23:07:42,134 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_459431/.job.ad'
[2025-06-05 01:08:01] 2025-06-04 23:07:42,135 | INFO     | total number of processed events: 400 (read)
[2025-06-05 01:08:01] 2025-06-04 23:07:42,138 | INFO     | executing command: lscpu
[2025-06-05 01:08:01] 2025-06-04 23:07:42,194 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-05 01:08:01] 2025-06-04 23:07:44,557 | INFO     | monitor loop #823: job 0:6677377704 is in state 'finished'
[2025-06-05 01:08:01] 2025-06-04 23:07:44,557 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,120 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-05 01:08:01] 2025-06-04 23:07:46,121 | INFO     | using path: /scratch/boinc/var/slot32/slots/0/PanDA_Pilot-6677377704/memory_monitor_summary.json (trf name=prmon)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,122 | INFO     | extracted standard info from prmon json
[2025-06-05 01:08:01] 2025-06-04 23:07:46,123 | INFO     | extracted standard memory fields from prmon json
[2025-06-05 01:08:01] 2025-06-04 23:07:46,123 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-05 01:08:01] 2025-06-04 23:07:46,123 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-05 01:08:01] 2025-06-04 23:07:46,124 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-05 01:08:01] 2025-06-04 23:07:46,128 | INFO     | fitting pss+swap vs Time
[2025-06-05 01:08:01] 2025-06-04 23:07:46,129 | INFO     | sum of square deviations: 1931608310.0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,130 | INFO     | sum of deviations: 21495708412.500004
[2025-06-05 01:08:01] 2025-06-04 23:07:46,130 | INFO     | mean x: 1749072822.5
[2025-06-05 01:08:01] 2025-06-04 23:07:46,130 | INFO     | mean y: 2318957.288043478
[2025-06-05 01:08:01] 2025-06-04 23:07:46,131 | INFO     | -- intersect: -19462061678.291424
[2025-06-05 01:08:01] 2025-06-04 23:07:46,131 | INFO     | intersect: -19462061678.291424
[2025-06-05 01:08:01] 2025-06-04 23:07:46,131 | INFO     | chi2: 1.6819585825082353
[2025-06-05 01:08:01] 2025-06-04 23:07:46,132 | INFO     | sum of square deviations: 1778377530.0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,133 | INFO     | sum of deviations: 20690001655.0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,133 | INFO     | mean x: 1749072670.0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,133 | INFO     | mean y: 2318155.229050279
[2025-06-05 01:08:01] 2025-06-04 23:07:46,133 | INFO     | -- intersect: -20346744867.972366
[2025-06-05 01:08:01] 2025-06-04 23:07:46,133 | INFO     | intersect: -20346744867.972366
[2025-06-05 01:08:01] 2025-06-04 23:07:46,134 | INFO     | chi2: 1.6834538653859923
[2025-06-05 01:08:01] 2025-06-04 23:07:46,134 | INFO     | current chi2=1.6834538653859923 (change=-0.08890129003813917 %)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,134 | INFO     | right removable region: 178
[2025-06-05 01:08:01] 2025-06-04 23:07:46,135 | INFO     | sum of square deviations: 1778377530.0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,136 | INFO     | sum of deviations: -8091054762.000001
[2025-06-05 01:08:01] 2025-06-04 23:07:46,136 | INFO     | mean x: 1749072975.0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,136 | INFO     | mean y: 2348094.100558659
[2025-06-05 01:08:01] 2025-06-04 23:07:46,136 | INFO     | -- intersect: 7960076408.098801
[2025-06-05 01:08:01] 2025-06-04 23:07:46,136 | INFO     | intersect: 7960076408.098801
[2025-06-05 01:08:01] 2025-06-04 23:07:46,137 | INFO     | chi2: 0.058579678423414536
[2025-06-05 01:08:01] 2025-06-04 23:07:46,137 | INFO     | current chi2=0.058579678423414536 (change=96.51717473708199 %)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,137 | INFO     | sum of square deviations: 1633472487.5
[2025-06-05 01:08:01] 2025-06-04 23:07:46,138 | INFO     | sum of deviations: -5193125291.5
[2025-06-05 01:08:01] 2025-06-04 23:07:46,139 | INFO     | mean x: 1749073127.5
[2025-06-05 01:08:01] 2025-06-04 23:07:46,139 | INFO     | mean y: 2345019.706896552
[2025-06-05 01:08:01] 2025-06-04 23:07:46,139 | INFO     | -- intersect: 5562987127.003641
[2025-06-05 01:08:01] 2025-06-04 23:07:46,139 | INFO     | intersect: 5562987127.003641
[2025-06-05 01:08:01] 2025-06-04 23:07:46,139 | INFO     | chi2: 0.04893701067587031
[2025-06-05 01:08:01] 2025-06-04 23:07:46,139 | INFO     | current chi2=0.04893701067587031 (change=16.460772757827254 %)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,140 | INFO     | left removable region: 20
[2025-06-05 01:08:01] 2025-06-04 23:07:46,140 | INFO     | sum of square deviations: 1223016419.5
[2025-06-05 01:08:01] 2025-06-04 23:07:46,141 | INFO     | sum of deviations: 2509613627.0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,141 | INFO     | mean x: 1749073249.5
[2025-06-05 01:08:01] 2025-06-04 23:07:46,141 | INFO     | mean y: 2335367.2911392404
[2025-06-05 01:08:01] 2025-06-04 23:07:46,141 | INFO     | -- intersect: -3586739964.470072
[2025-06-05 01:08:01] 2025-06-04 23:07:46,142 | INFO     | intersect: -3586739964.470072
[2025-06-05 01:08:01] 2025-06-04 23:07:46,142 | INFO     | chi2: 0.0005364820738721639
[2025-06-05 01:08:01] 2025-06-04 23:07:46,142 | INFO     | -- intersect: -3586739964.470072
[2025-06-05 01:08:01] 2025-06-04 23:07:46,142 | INFO     | current memory leak: 2.05 B/s (using 158 data points, chi2=0.00)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,143 | INFO     | ..............................
[2025-06-05 01:08:01] 2025-06-04 23:07:46,143 | INFO     | . Timing measurements:
[2025-06-05 01:08:01] 2025-06-04 23:07:46,143 | INFO     | . get job = 0 s
[2025-06-05 01:08:01] 2025-06-04 23:07:46,143 | INFO     | . initial setup = 1 s
[2025-06-05 01:08:01] 2025-06-04 23:07:46,144 | INFO     | . payload setup = 6 s
[2025-06-05 01:08:01] 2025-06-04 23:07:46,144 | INFO     | . stage-in = 0 s
[2025-06-05 01:08:01] 2025-06-04 23:07:46,144 | INFO     | . payload execution = 11219 s
[2025-06-05 01:08:01] 2025-06-04 23:07:46,144 | INFO     | . stage-out = 1 s
[2025-06-05 01:08:01] 2025-06-04 23:07:46,144 | INFO     | . log creation = 0 s
[2025-06-05 01:08:01] 2025-06-04 23:07:46,144 | INFO     | ..............................
[2025-06-05 01:08:01] 2025-06-04 23:07:46,624 | INFO     | 
[2025-06-05 01:08:01] 2025-06-04 23:07:46,625 | INFO     | job summary report
[2025-06-05 01:08:01] 2025-06-04 23:07:46,625 | INFO     | --------------------------------------------------
[2025-06-05 01:08:01] 2025-06-04 23:07:46,625 | INFO     | PanDA job id: 6677377704
[2025-06-05 01:08:01] 2025-06-04 23:07:46,625 | INFO     | task id: 45006595
[2025-06-05 01:08:01] 2025-06-04 23:07:46,625 | INFO     | errors: (none)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,625 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-05 01:08:01] 2025-06-04 23:07:46,625 | INFO     | pilot state: finished 
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | transexitcode: 0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | exeerrorcode: 0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | exeerrordiag: 
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | exitcode: 0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | exitmsg: OK
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | cpuconsumptiontime: 43143 s
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | nevents: 400
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | neventsw: 0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,626 | INFO     | pid: 2813717
[2025-06-05 01:08:01] 2025-06-04 23:07:46,627 | INFO     | pgrp: 2813717
[2025-06-05 01:08:01] 2025-06-04 23:07:46,627 | INFO     | corecount: 4
[2025-06-05 01:08:01] 2025-06-04 23:07:46,627 | INFO     | event service: False
[2025-06-05 01:08:01] 2025-06-04 23:07:46,627 | INFO     | sizes: {0: 2397170, 1: 2397369, 5: 2397575, 11: 2397631, 11230: 2426636, 11232: 2435783, 11236: 2435897}
[2025-06-05 01:08:01] 2025-06-04 23:07:46,627 | INFO     | --------------------------------------------------
[2025-06-05 01:08:01] 2025-06-04 23:07:46,627 | INFO     | 
[2025-06-05 01:08:01] 2025-06-04 23:07:46,627 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-06-05 01:08:01] 2025-06-04 23:07:46,648 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,649 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,649 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,649 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,649 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,649 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,649 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,649 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,650 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,651 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,651 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,651 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-05 01:08:01] 2025-06-04 23:07:46,651 | INFO     | job 6677377704 has completed (purged errors)
[2025-06-05 01:08:01] 2025-06-04 23:07:46,651 | INFO     | overall cleanup function is called
[2025-06-05 01:08:01] 2025-06-04 23:07:47,655 | INFO     | --- collectZombieJob: --- 10, [2813717]
[2025-06-05 01:08:01] 2025-06-04 23:07:47,655 | INFO     | zombie collector waiting for pid 2813717
[2025-06-05 01:08:01] 2025-06-04 23:07:47,655 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-05 01:08:01] 2025-06-04 23:07:47,655 | INFO     | collected zombie processes
[2025-06-05 01:08:01] 2025-06-04 23:07:47,656 | INFO     | will attempt to kill all subprocesses of pid=2813717
[2025-06-05 01:08:01] 2025-06-04 23:07:48,019 | INFO     | process IDs to be killed: [2813717] (in reverse order)
[2025-06-05 01:08:01] 2025-06-04 23:07:48,107 | WARNING  | found no corresponding commands to process id(s)
[2025-06-05 01:08:01] 2025-06-04 23:07:48,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-05 01:08:01] 2025-06-04 23:07:48,115 | INFO     | did not find any defunct processes belonging to 2813717
[2025-06-05 01:08:01] 2025-06-04 23:07:48,123 | INFO     | did not find any defunct processes belonging to 2813717
[2025-06-05 01:08:01] 2025-06-04 23:07:48,123 | INFO     | ready for new job
[2025-06-05 01:08:01] 2025-06-04 23:07:48,124 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-05 01:08:01] 2025-06-04 23:07:48,126 | INFO     | **************************************
[2025-06-05 01:08:01] 2025-06-04 23:07:48,126 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-05 01:08:01] 2025-06-04 23:07:48,126 | INFO     | **************************************
[2025-06-05 01:08:01] 2025-06-04 23:07:48,126 | INFO     | 
[2025-06-05 01:08:01] 2025-06-04 23:07:48,128 | INFO     | architecture information:
[2025-06-05 01:08:01] 2025-06-04 23:07:48,129 | INFO     | executing command: cat /etc/os-release
[2025-06-05 01:08:01] 2025-06-04 23:07:48,143 | INFO     | cat /etc/os-release:
[2025-06-05 01:08:01] NAME="CentOS Linux"
[2025-06-05 01:08:01] VERSION="7 (Core)"
[2025-06-05 01:08:01] ID="centos"
[2025-06-05 01:08:01] ID_LIKE="rhel fedora"
[2025-06-05 01:08:01] VERSION_ID="7"
[2025-06-05 01:08:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-05 01:08:01] ANSI_COLOR="0;31"
[2025-06-05 01:08:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-05 01:08:01] HOME_URL="https://www.centos.org/"
[2025-06-05 01:08:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-05 01:08:01] 
[2025-06-05 01:08:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-05 01:08:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-05 01:08:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-05 01:08:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-05 01:08:01] 
[2025-06-05 01:08:01] 2025-06-04 23:07:48,144 | INFO     | **************************************
[2025-06-05 01:08:01] 2025-06-04 23:07:48,647 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-06-05 01:08:01] 2025-06-04 23:07:48,665 | INFO     | sufficient remaining disk space (1653935702016 B)
[2025-06-05 01:08:01] 2025-06-04 23:07:48,666 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-05 01:08:01] 2025-06-04 23:07:48,666 | INFO     | current server update state: UPDATING_FINAL
[2025-06-05 01:08:01] 2025-06-04 23:07:48,666 | INFO     | update_server=False
[2025-06-05 01:08:01] 2025-06-04 23:07:48,667 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-05 01:08:01] 2025-06-04 23:07:48,667 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:08:01] 2025-06-04 23:07:48,667 | INFO     | aborting loop
[2025-06-05 01:08:01] 2025-06-04 23:07:48,668 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-05 01:08:01] 2025-06-04 23:07:48,734 | INFO     | PID=2795572 has CPU usage=13.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-06-05 01:08:01] 2025-06-04 23:07:48,734 | INFO     | .. there are 5 such processes running
[2025-06-05 01:08:01] 2025-06-04 23:07:48,735 | INFO     | found 0 job(s) in 20 queues
[2025-06-05 01:08:01] 2025-06-04 23:07:48,735 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-05 01:08:01] 2025-06-04 23:07:48,735 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-05 01:08:01] 2025-06-04 23:07:49,517 | INFO     | all payload control threads have been joined
[2025-06-05 01:08:01] 2025-06-04 23:07:49,669 | INFO     | [job] retrieve thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:49,669 | INFO     | [job] job monitor thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:49,679 | INFO     | all data control threads have been joined
[2025-06-05 01:08:01] 2025-06-04 23:07:49,777 | INFO     | all job control threads have been joined
[2025-06-05 01:08:01] 2025-06-04 23:07:50,006 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-05 01:08:01] 2025-06-04 23:07:50,024 | INFO     | [payload] failed_post thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:50,144 | INFO     | [payload] execute_payloads thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:50,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:50,522 | INFO     | [payload] control thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:50,680 | INFO     | [data] control thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:50,782 | INFO     | [job] control thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:50,856 | INFO     | [payload] validate_post thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:50,865 | INFO     | [job] create_data_payload thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:50,965 | INFO     | [job] validate thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:51,021 | INFO     | [payload] validate_pre thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:51,050 | INFO     | [data] copytool_in thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:51,270 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-05 01:08:01] 2025-06-04 23:07:52,011 | INFO     | [data] copytool_out thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:52,275 | INFO     | [job] queue monitor thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:52,674 | INFO     | [data] queue_monitor thread has finished
[2025-06-05 01:08:01] 2025-06-04 23:07:53,892 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22534647011136)>', '<ExcThread(monitor, started 22534334412544)>']
[2025-06-05 01:08:01] 2025-06-04 23:07:54,765 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-05 01:08:01] 2025-06-04 23:07:54,766 | INFO     | [monitor] control thread has ended
[2025-06-05 01:08:01] 2025-06-04 23:07:58,917 | INFO     | all workflow threads have been joined
[2025-06-05 01:08:01] 2025-06-04 23:07:58,918 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-05 01:08:01] 2025-06-04 23:07:58,918 | INFO     | traces error code: 0
[2025-06-05 01:08:01] 2025-06-04 23:07:58,918 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-05 01:08:01] 2025-06-04 23:07:59,083 [wrapper] ==== pilot stdout END ====
[2025-06-05 01:08:01] 2025-06-04 23:07:59,086 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-05 01:08:01] 2025-06-04 23:07:59,088 [wrapper] pilotpid: 2795572
[2025-06-05 01:08:01] 2025-06-04 23:07:59,091 [wrapper] Pilot exit status: 0
[2025-06-05 01:08:01] 2025-06-04 23:07:59,101 [wrapper] pandaids: 6677377704
[2025-06-05 01:08:01] 2025-06-04 23:07:59,153 [wrapper] cleanup supervisor_pilot 3008930 2795573
[2025-06-05 01:08:01] 2025-06-04 23:07:59,155 [wrapper] Test setup, not cleaning
[2025-06-05 01:08:01] 2025-06-04 23:07:59,158 [wrapper] apfmon messages muted
[2025-06-05 01:08:01] 2025-06-04 23:07:59,161 [wrapper] ==== wrapper stdout END ====
[2025-06-05 01:08:01] 2025-06-04 23:07:59,163 [wrapper] ==== wrapper stderr END ====
[2025-06-05 01:08:01]  *** Error codes and diagnostics ***
[2025-06-05 01:08:01]     "exeErrorCode": 0,
[2025-06-05 01:08:01]     "exeErrorDiag": "",
[2025-06-05 01:08:01]     "pilotErrorCode": 0,
[2025-06-05 01:08:01]     "pilotErrorDiag": "",
[2025-06-05 01:08:01]  *** Listing of results directory ***
[2025-06-05 01:08:01] total 396352
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-05 01:08:01] -rwx------ 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc       100 Jun  4 21:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-05 01:08:01] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 21:59 run_atlas
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc       105 Jun  4 21:59 job.xml
[2025-06-05 01:08:01] -rw-r--r-- 2 boinc boinc 216843750 Jun  4 22:00 EVNT.45006593._000031.pool.root.1
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc      6421 Jun  4 22:00 init_data.xml
[2025-06-05 01:08:01] drwxrwx--x 2 boinc boinc      4096 Jun  4 22:00 shared
[2025-06-05 01:08:01] -rw-r--r-- 2 boinc boinc    508879 Jun  4 22:00 input.tar.gz
[2025-06-05 01:08:01] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:00 start_atlas.sh
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc         0 Jun  4 22:00 boinc_lockfile
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc      2519 Jun  4 22:00 pandaJob.out
[2025-06-05 01:08:01] -rw------- 1 boinc boinc    991007 Jun  4 22:00 agis_schedconf.cvmfs.json
[2025-06-05 01:08:01] drwx------ 4 boinc boinc      4096 Jun  4 22:00 pilot3
[2025-06-05 01:08:01] -rw------- 1 boinc boinc 182416912 Jun  5 01:07 HITS.45006595._000776.pool.root.1
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc       529 Jun  5 01:07 boinc_task_state.xml
[2025-06-05 01:08:01] -rw------- 1 boinc boinc        95 Jun  5 01:07 pilot_heartbeat.json
[2025-06-05 01:08:01] -rw------- 1 boinc boinc      1036 Jun  5 01:07 memory_monitor_summary.json
[2025-06-05 01:08:01] -rw------- 1 boinc boinc   1598969 Jun  5 01:07 agis_ddmendpoints.agis.ALL.json
[2025-06-05 01:08:01] -rw------- 1 boinc boinc    323423 Jun  5 01:07 log.45006595._000776.job.log.tgz.1
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc        26 Jun  5 01:07 wrapper_checkpoint.txt
[2025-06-05 01:08:01] -rw------- 1 boinc boinc      7720 Jun  5 01:07 heartbeat.json
[2025-06-05 01:08:01] -rw------- 1 boinc boinc      4759 Jun  5 01:07 pilotlog.txt
[2025-06-05 01:08:01] -rw------- 1 boinc boinc   1058132 Jun  5 01:07 log.45006595._000776.job.log.1
[2025-06-05 01:08:01] -rw------- 1 boinc boinc       357 Jun  5 01:07 output.list
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc       620 Jun  5 01:07 runtime_log
[2025-06-05 01:08:01] -rw------- 1 boinc boinc   1402880 Jun  5 01:07 result.tar.gz
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc      9026 Jun  5 01:07 runtime_log.err
[2025-06-05 01:08:01] -rw------- 1 boinc boinc       664 Jun  5 01:07 l8BMDmxaMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmt2eKDmSQRU7m.diag
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc      8192 Jun  5 01:08 boinc_mmap_file
[2025-06-05 01:08:01] -rw-r--r-- 1 boinc boinc     21017 Jun  5 01:08 stderr.txt
[2025-06-05 01:08:01] HITS file was successfully produced:
[2025-06-05 01:08:01] -rw------- 1 boinc boinc 182416912 Jun  5 01:07 shared/HITS.pool.root.1
[2025-06-05 01:08:01]  *** Contents of shared directory: ***
[2025-06-05 01:08:01] total 391804
[2025-06-05 01:08:01] -rw-r--r-- 2 boinc boinc 216843750 Jun  4 22:00 ATLAS.root_0
[2025-06-05 01:08:01] -rw-r--r-- 2 boinc boinc    508879 Jun  4 22:00 input.tar.gz
[2025-06-05 01:08:01] -rw-r--r-- 2 boinc boinc     15093 Jun  4 22:00 start_atlas.sh
[2025-06-05 01:08:01] -rw------- 1 boinc boinc 182416912 Jun  5 01:07 HITS.pool.root.1
[2025-06-05 01:08:01] -rw------- 1 boinc boinc   1402880 Jun  5 01:07 result.tar.gz
01:08:03 (2789848): run_atlas exited; CPU time 43575.731483
01:08:03 (2789848): called boinc_finish(0)

</stderr_txt>
]]>

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