Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:03:59 (32269): wrapper (7.7.26015): starting
04:03:59 (32269): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:03:59] Arguments: --nthreads 8
[2025-06-03 04:03:59] Threads: 8
[2025-06-03 04:03:59] Checking for CVMFS
[2025-06-03 04:03:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:04:00] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 04:04:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 04:04:01] 2.11.2.0 28532 31239 90320 146723 1 210 20354796 25165825 4633 130560 0 16298971 99.777 18897608 2558 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 04:04:01] CVMFS is ok
[2025-06-03 04:04:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 04:04:01] Checking for apptainer binary...
[2025-06-03 04:04:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 04:04:01] Running /usr/bin/apptainer --version
[2025-06-03 04:04:01] apptainer version 1.3.2-1.el7
[2025-06-03 04:04:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 04:04:12] cg-vwn472.simple-grid.lan
[2025-06-03 04:04:12] apptainer works
[2025-06-03 04:04:12] Set ATHENA_PROC_NUMBER=8
[2025-06-03 04:04:12] Set ATHENA_CORE_NUMBER=8
[2025-06-03 04:04:12] Starting ATLAS job with PandaID=6677387804
[2025-06-03 04:04:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:06:10]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:06:10] 2025-06-03 05:42:57,868 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:06:10] 2025-06-03 05:42:57,868 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:06:10] 2025-06-03 05:42:57,868 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:06:10] 2025-06-03 05:42:57,868 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:06:10] 2025-06-03 05:42:57,872 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:06:10] 2025-06-03 05:42:57,873 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,874 | INFO     | sum of deviations: 44946042997.000015
[2025-06-03 08:06:10] 2025-06-03 05:42:57,874 | INFO     | mean x: 1748923086.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,874 | INFO     | mean y: 2519664.866995074
[2025-06-03 08:06:10] 2025-06-03 05:42:57,874 | INFO     | -- intersect: -30301914170.61527
[2025-06-03 08:06:10] 2025-06-03 05:42:57,875 | INFO     | intersect: -30301914170.61527
[2025-06-03 08:06:10] 2025-06-03 05:42:57,875 | INFO     | chi2: 8.487787318293343
[2025-06-03 08:06:10] 2025-06-03 05:42:57,875 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 08:06:10] 2025-06-03 05:42:57,877 | INFO     | sum of deviations: 59409912664.50003
[2025-06-03 08:06:10] 2025-06-03 05:42:57,877 | INFO     | mean x: 1748922933.5
[2025-06-03 08:06:10] 2025-06-03 05:42:57,877 | INFO     | mean y: 2531243.297979798
[2025-06-03 08:06:10] 2025-06-03 05:42:57,877 | INFO     | -- intersect: -43165940085.26543
[2025-06-03 08:06:10] 2025-06-03 05:42:57,877 | INFO     | intersect: -43165940085.26543
[2025-06-03 08:06:10] 2025-06-03 05:42:57,877 | INFO     | chi2: 7.791860622005636
[2025-06-03 08:06:10] 2025-06-03 05:42:57,877 | INFO     | current chi2=7.791860622005636 (change=8.199153326896015 %)
[2025-06-03 08:06:10] 2025-06-03 05:42:57,878 | INFO     | right removable region: 197
[2025-06-03 08:06:10] 2025-06-03 05:42:57,878 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 08:06:10] 2025-06-03 05:42:57,879 | INFO     | sum of deviations: -28465203114.000015
[2025-06-03 08:06:10] 2025-06-03 05:42:57,879 | INFO     | mean x: 1748923238.5
[2025-06-03 08:06:10] 2025-06-03 05:42:57,879 | INFO     | mean y: 2579494.6767676766
[2025-06-03 08:06:10] 2025-06-03 05:42:57,880 | INFO     | -- intersect: 20685988435.5682
[2025-06-03 08:06:10] 2025-06-03 05:42:57,880 | INFO     | intersect: 20685988435.5682
[2025-06-03 08:06:10] 2025-06-03 05:42:57,880 | INFO     | chi2: 3.2865261075089376
[2025-06-03 08:06:10] 2025-06-03 05:42:57,880 | INFO     | current chi2=3.2865261075089376 (change=61.27935368472727 %)
[2025-06-03 08:06:10] 2025-06-03 05:42:57,880 | INFO     | sum of square deviations: 2229146912.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,882 | INFO     | sum of deviations: -74825758092.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,882 | INFO     | mean x: 1748923391.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,882 | INFO     | mean y: 2619080.067357513
[2025-06-03 08:06:10] 2025-06-03 05:42:57,882 | INFO     | -- intersect: 58708717754.82636
[2025-06-03 08:06:10] 2025-06-03 05:42:57,882 | INFO     | intersect: 58708717754.82636
[2025-06-03 08:06:10] 2025-06-03 05:42:57,882 | INFO     | chi2: 1.0819857239994908
[2025-06-03 08:06:10] 2025-06-03 05:42:57,882 | INFO     | current chi2=1.0819857239994908 (change=67.07813391387921 %)
[2025-06-03 08:06:10] 2025-06-03 05:42:57,883 | INFO     | sum of square deviations: 2060343747.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,884 | INFO     | sum of deviations: -82165193271.5
[2025-06-03 08:06:10] 2025-06-03 05:42:57,884 | INFO     | mean x: 1748923543.5
[2025-06-03 08:06:10] 2025-06-03 05:42:57,884 | INFO     | mean y: 2625685.9521276597
[2025-06-03 08:06:10] 2025-06-03 05:42:57,884 | INFO     | -- intersect: 69748580057.88255
[2025-06-03 08:06:10] 2025-06-03 05:42:57,884 | INFO     | intersect: 69748580057.88255
[2025-06-03 08:06:10] 2025-06-03 05:42:57,885 | INFO     | chi2: 0.9494590164792194
[2025-06-03 08:06:10] 2025-06-03 05:42:57,885 | INFO     | current chi2=0.9494590164792194 (change=12.24847099002332 %)
[2025-06-03 08:06:10] 2025-06-03 05:42:57,885 | INFO     | left removable region: 30
[2025-06-03 08:06:10] 2025-06-03 05:42:57,885 | INFO     | sum of square deviations: 1444149868.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,886 | INFO     | sum of deviations: -57327373366.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,886 | INFO     | mean x: 1748923818.0
[2025-06-03 08:06:10] 2025-06-03 05:42:57,886 | INFO     | mean y: 2633576.7005988024
[2025-06-03 08:06:10] 2025-06-03 05:42:57,886 | INFO     | -- intersect: 69428398121.50352
[2025-06-03 08:06:10] 2025-06-03 05:42:57,886 | INFO     | intersect: 69428398121.50352
[2025-06-03 08:06:10] 2025-06-03 05:42:57,887 | INFO     | chi2: 0.1387531955316662
[2025-06-03 08:06:10] 2025-06-03 05:42:57,887 | INFO     | -- intersect: 69428398121.50352
[2025-06-03 08:06:10] 2025-06-03 05:42:57,887 | INFO     | current memory leak: -39.70 B/s (using 167 data points, chi2=0.14)
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | ..............................
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | . Timing measurements:
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | . get job = 0 s
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | . initial setup = 4 s
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | . payload setup = 138 s
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | . stage-in = 0 s
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | . payload execution = 12501 s
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | . stage-out = 3 s
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | . log creation = 1 s
[2025-06-03 08:06:10] 2025-06-03 05:42:57,888 | INFO     | ..............................
[2025-06-03 08:06:10] 2025-06-03 05:42:58,004 | INFO     | 
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | job summary report
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | --------------------------------------------------
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | PanDA job id: 6677387804
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | task id: 45006595
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | errors: (none)
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | pilot state: finished 
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | transexitcode: 0
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | exeerrorcode: 0
[2025-06-03 08:06:10] 2025-06-03 05:42:58,005 | INFO     | exeerrordiag: 
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | exitcode: 0
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | exitmsg: OK
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | cpuconsumptiontime: 44584 s
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | nevents: 400
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | neventsw: 0
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | pid: 14123
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | pgrp: 14123
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | corecount: 8
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | event service: False
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | sizes: {0: 2405006, 1: 2405205, 12: 2405205, 23: 2405233, 34: 2405261, 44: 2405289, 55: 2405445, 66: 2405473, 76: 2405501, 87: 2405557, 90: 2405791, 98: 2406099, 1
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | --------------------------------------------------
[2025-06-03 08:06:10] 2025-06-03 05:42:58,006 | INFO     | 
[2025-06-03 08:06:10] 2025-06-03 05:42:58,007 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-06-03 08:06:10] 2025-06-03 05:42:58,710 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,710 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,710 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,710 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,711 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:06:10] 2025-06-03 05:42:58,712 | INFO     | job 6677387804 has completed (purged errors)
[2025-06-03 08:06:10] 2025-06-03 05:42:58,712 | INFO     | overall cleanup function is called
[2025-06-03 08:06:10] 2025-06-03 05:42:59,720 | INFO     | --- collectZombieJob: --- 10, [14123]
[2025-06-03 08:06:10] 2025-06-03 05:42:59,721 | INFO     | zombie collector waiting for pid 14123
[2025-06-03 08:06:10] 2025-06-03 05:42:59,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:06:10] 2025-06-03 05:42:59,721 | INFO     | collected zombie processes
[2025-06-03 08:06:10] 2025-06-03 05:42:59,721 | INFO     | will attempt to kill all subprocesses of pid=14123
[2025-06-03 08:06:10] 2025-06-03 05:42:59,864 | INFO     | process IDs to be killed: [14123] (in reverse order)
[2025-06-03 08:06:10] 2025-06-03 05:42:59,951 | INFO     | PID=7526 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 08:06:10] 2025-06-03 05:42:59,952 | INFO     | .. there are 9 such processes running
[2025-06-03 08:06:10] 2025-06-03 05:43:00,671 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:06:10] 2025-06-03 05:43:00,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:06:10] 2025-06-03 05:43:00,674 | INFO     | did not find any defunct processes belonging to 14123
[2025-06-03 08:06:10] 2025-06-03 05:43:00,677 | INFO     | did not find any defunct processes belonging to 14123
[2025-06-03 08:06:10] 2025-06-03 05:43:00,677 | INFO     | ready for new job
[2025-06-03 08:06:10] 2025-06-03 05:43:00,677 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:06:10] 2025-06-03 05:43:00,679 | INFO     | **************************************
[2025-06-03 08:06:10] 2025-06-03 05:43:00,679 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:06:10] 2025-06-03 05:43:00,679 | INFO     | **************************************
[2025-06-03 08:06:10] 2025-06-03 05:43:00,679 | INFO     | 
[2025-06-03 08:06:10] 2025-06-03 05:43:00,680 | INFO     | pilot is running in a VM
[2025-06-03 08:06:10] 2025-06-03 05:43:00,680 | INFO     | architecture information:
[2025-06-03 08:06:10] 2025-06-03 05:43:00,688 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:06:10] 2025-06-03 05:43:00,916 | INFO     | cat /etc/os-release:
[2025-06-03 08:06:10] NAME="CentOS Linux"
[2025-06-03 08:06:10] VERSION="7 (Core)"
[2025-06-03 08:06:10] ID="centos"
[2025-06-03 08:06:10] ID_LIKE="rhel fedora"
[2025-06-03 08:06:10] VERSION_ID="7"
[2025-06-03 08:06:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:06:10] ANSI_COLOR="0;31"
[2025-06-03 08:06:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:06:10] HOME_URL="https://www.centos.org/"
[2025-06-03 08:06:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:06:10] 
[2025-06-03 08:06:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:06:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:06:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:06:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:06:10] 
[2025-06-03 08:06:10] 2025-06-03 05:43:00,916 | INFO     | **************************************
[2025-06-03 08:06:10] 2025-06-03 05:43:01,419 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-06-03 08:06:10] 2025-06-03 05:43:01,605 | INFO     | sufficient remaining disk space (496899194880 B)
[2025-06-03 08:06:10] 2025-06-03 05:43:01,605 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:06:10] 2025-06-03 05:43:01,605 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:06:10] 2025-06-03 05:43:01,606 | INFO     | update_server=False
[2025-06-03 08:06:10] 2025-06-03 05:43:01,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:06:10] 2025-06-03 05:43:01,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:06:10] 2025-06-03 05:43:01,958 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:06:10] 2025-06-03 05:43:01,959 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:06:10] 2025-06-03 05:43:01,959 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:06:10] 2025-06-03 05:43:01,991 | INFO     | all data control threads have been joined
[2025-06-03 08:06:10] 2025-06-03 05:43:02,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:06:10] 2025-06-03 05:43:02,096 | INFO     | aborting loop
[2025-06-03 08:06:10] 2025-06-03 05:43:02,236 | INFO     | all payload control threads have been joined
[2025-06-03 08:06:10] 2025-06-03 05:43:02,611 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:02,865 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:02,997 | INFO     | [data] control thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:03,019 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:06:10] 2025-06-03 05:43:03,099 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:06:10] 2025-06-03 05:43:03,101 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:03,138 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:03,238 | INFO     | all job control threads have been joined
[2025-06-03 08:06:10] 2025-06-03 05:43:03,242 | INFO     | [payload] control thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:03,288 | INFO     | [job] validate thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:03,439 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:03,732 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:03,913 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:04,003 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:04,025 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:04,029 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:04,244 | INFO     | [job] control thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:05,106 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:05,615 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:06:10] 2025-06-03 05:43:05,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140072552523584)>', '<ExcThread(monitor, started 140072036857600)>']
[2025-06-03 08:06:10] 2025-06-03 05:43:05,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:06:10] 2025-06-03 05:43:05,982 | INFO     | [monitor] control thread has ended
[2025-06-03 08:06:10] 2025-06-03 05:43:10,752 | INFO     | all workflow threads have been joined
[2025-06-03 08:06:10] 2025-06-03 05:43:10,753 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:06:10] 2025-06-03 05:43:10,753 | INFO     | traces error code: 0
[2025-06-03 08:06:10] 2025-06-03 05:43:10,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:06:10] 2025-06-03 05:43:11,024 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:06:10] 2025-06-03 05:43:11,102 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:06:10] 2025-06-03 05:43:11,153 [wrapper] pilotpid: 7526
[2025-06-03 08:06:10] 2025-06-03 05:43:11,178 [wrapper] Pilot exit status: 0
[2025-06-03 08:06:10] 2025-06-03 05:43:11,574 [wrapper] pandaids: 6677387804
[2025-06-03 08:06:10] 2025-06-03 05:43:12,523 [wrapper] cleanup supervisor_pilot  6111 7527
[2025-06-03 08:06:10] 2025-06-03 05:43:12,596 [wrapper] Test setup, not cleaning
[2025-06-03 08:06:10] 2025-06-03 05:43:12,703 [wrapper] apfmon messages muted
[2025-06-03 08:06:10] 2025-06-03 05:43:12,806 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:06:10] 2025-06-03 05:43:12,865 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:06:10]  *** Error codes and diagnostics ***
[2025-06-03 08:06:10]     "exeErrorCode": 0,
[2025-06-03 08:06:10]     "exeErrorDiag": "",
[2025-06-03 08:06:10]     "pilotErrorCode": 0,
[2025-06-03 08:06:10]     "pilotErrorDiag": "",
[2025-06-03 08:06:10]  *** Listing of results directory ***
[2025-06-03 08:06:10] total 390004
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:25 pilot3.tar.gz
[2025-06-03 08:06:10] -rwx------. 1 boinc boinc     37140 Jun  2 19:34 runpilot2-wrapper.sh
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:34 queuedata.json
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc       100 Jun  3 04:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:06:10] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 04:03 run_atlas
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc       105 Jun  3 04:03 job.xml
[2025-06-03 08:06:10] -rw-r--r--. 2 boinc boinc    508873 Jun  3 04:03 input.tar.gz
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc      6392 Jun  3 04:03 init_data.xml
[2025-06-03 08:06:10] -rw-r--r--. 2 boinc boinc 214815561 Jun  3 04:03 EVNT.45006593._000231.pool.root.1
[2025-06-03 08:06:10] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:03 start_atlas.sh
[2025-06-03 08:06:10] drwxrwx--x. 2 boinc boinc        68 Jun  3 04:03 shared
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc         0 Jun  3 04:03 boinc_lockfile
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc      2521 Jun  3 04:04 pandaJob.out
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc    988081 Jun  3 04:07 agis_schedconf.cvmfs.json
[2025-06-03 08:06:10] drwx------. 4 boinc boinc      4096 Jun  3 04:07 pilot3
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc 177749696 Jun  3 07:39 HITS.45006595._005765.pool.root.1
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:40 boinc_task_state.xml
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc      1018 Jun  3 07:41 memory_monitor_summary.json
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc   1603667 Jun  3 07:41 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc    374598 Jun  3 07:41 log.45006595._005765.job.log.tgz.1
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc        95 Jun  3 07:42 pilot_heartbeat.json
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc      7699 Jun  3 07:42 heartbeat.json
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc      4416 Jun  3 07:43 pilotlog.txt
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc   1113218 Jun  3 07:43 log.45006595._005765.job.log.1
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc       357 Jun  3 07:43 output.list
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:43 runtime_log
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc   1505280 Jun  3 07:43 result.tar.gz
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc       656 Jun  3 07:43 VoVNDmoEOg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmPzVKDmNJlV8n.diag
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc      8659 Jun  3 07:43 runtime_log.err
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:06 boinc_mmap_file
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:06 wrapper_checkpoint.txt
[2025-06-03 08:06:10] -rw-r--r--. 1 boinc boinc     20575 Jun  3 08:06 stderr.txt
[2025-06-03 08:06:10] HITS file was successfully produced:
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc 177749696 Jun  3 07:39 shared/HITS.pool.root.1
[2025-06-03 08:06:10]  *** Contents of shared directory: ***
[2025-06-03 08:06:10] total 385356
[2025-06-03 08:06:10] -rw-r--r--. 2 boinc boinc    508873 Jun  3 04:03 input.tar.gz
[2025-06-03 08:06:10] -rw-r--r--. 2 boinc boinc 214815561 Jun  3 04:03 ATLAS.root_0
[2025-06-03 08:06:10] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:03 start_atlas.sh
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc 177749696 Jun  3 07:39 HITS.pool.root.1
[2025-06-03 08:06:10] -rw-------. 1 boinc boinc   1505280 Jun  3 07:43 result.tar.gz
08:06:12 (32269): run_atlas exited; CPU time 44748.657382
08:06:12 (32269): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN