Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:48:45 (1070556): wrapper (7.7.26015): starting
11:48:45 (1070556): wrapper: running run_atlas (--nthreads 12)
[2025-06-02 11:48:45] Arguments: --nthreads 12
[2025-06-02 11:48:45] Threads: 12
[2025-06-02 11:48:45] Checking for CVMFS
[2025-06-02 11:48:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 11:48:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 11:48:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 11:48:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 11:48:45] 2.11.5.0 3794801 21155 173540 146716 2 480 37351298 45568001 10149 130560 0 198429141 99.787 134657115 27098 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-06-02 11:48:45] CVMFS is ok
[2025-06-02 11:48:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-02 11:48:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-02 11:48:45] Further information can be found at the LHC@home message board.
[2025-06-02 11:48:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 11:48:45] Checking for apptainer binary...
[2025-06-02 11:48:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 11:48:45] Running /usr/bin/apptainer --version
[2025-06-02 11:48:45] apptainer version 1.4.0-1.el9
[2025-06-02 11:48:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 11:48:45] wns0069.triumf.lcg
[2025-06-02 11:48:45] apptainer works
[2025-06-02 11:48:45] Set ATHENA_PROC_NUMBER=12
[2025-06-02 11:48:45] Set ATHENA_CORE_NUMBER=12
[2025-06-02 11:48:45] Starting ATLAS job with PandaID=6677380649
[2025-06-02 11:48:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-02 11:51:45]  *** The last 200 lines of the pilot log: ***
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | INFO     | extracted standard info from prmon json
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | WARNING  | found no stored workdir sizes
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | WARNING  | wrong length of table data, x=[1748890155.0], y=[1145.0] (must be same and length>=4)
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | ..............................
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | . Timing measurements:
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | . get job = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . initial setup = 2 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . payload setup = 3 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . stage-in = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . payload execution = 14 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . stage-out = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . log creation = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | ..............................
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677380649/pilotlog.txt
[2025-06-02 11:51:45] 2025-06-02 18:51:31,042 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-06-02 11:51:45] - Log from pilotlog.txt -
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | INFO     | extracted standard info from prmon json
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | WARNING  | found no stored workdir sizes
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | WARNING  | wrong length of table data, x=[1748890155.0], y=[1145.0] (must be same and length>=4)
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | ..............................
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | . Timing measurements:
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | . get job = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . initial setup = 2 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . payload setup = 3 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . stage-in = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . payload execution = 14 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . stage-out = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . log creation = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | ..............................
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677380649/pilotlog.txt
[2025-06-02 11:51:45] 2025-06-02 18:51:31,043 | WARNING  | 
[2025-06-02 11:51:45] [begin log extracts]
[2025-06-02 11:51:45] - Log from pilotlog.txt -
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | INFO     | extracted standard info from prmon json
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | INFO     | extracted standard memory fields from prmon json
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-02 11:51:45] 2025-06-02 18:51:31,030 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | WARNING  | found no stored workdir sizes
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | will not add max space = 0 B to job metrics
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | WARNING  | wrong length of table data, x=[1748890155.0], y=[1145.0] (must be same and length>=4)
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | ..............................
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | . Timing measurements:
[2025-06-02 11:51:45] 2025-06-02 18:51:31,031 | INFO     | . get job = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . initial setup = 2 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . payload setup = 3 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . stage-in = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . payload execution = 14 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . stage-out = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | . log creation = 0 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | ..............................
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-06-02 11:51:45] 2025-06-02 18:51:31,032 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6677380649/pilotlog.txt
[2025-06-02 11:51:45] [end log extracts]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,043 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-06-02 11:51:45] 2025-06-02 18:51:31,044 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | 
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | job summary report
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | --------------------------------------------------
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | PanDA job id: 6677380649
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | task id: 45006595
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-06-02 11:49:21,335 CRITICAL Transform executor raised TransformValidationExceptio
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | pilot state: failed 
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | transexitcode: 65
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | exeerrorcode: 65
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | exitcode: 65
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-06-02 11:51:45] 2025-06-02 18:51:31,369 | INFO     | cpuconsumptiontime: 15 s
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | nevents: 0
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | neventsw: 0
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | pid: 1080526
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | pgrp: 1080526
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | corecount: 12
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | event service: False
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | sizes: {0: 2405173, 3: 2405379, 10: 2405407, 21: 2428604, 22: 2428580, 23: 2432843, 24: 2432999, 144: 2433141}
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | --------------------------------------------------
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | 
[2025-06-02 11:51:45] 2025-06-02 18:51:31,370 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,385 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | job 6677380649 has completed (purged errors)
[2025-06-02 11:51:45] 2025-06-02 18:51:31,386 | INFO     | overall cleanup function is called
[2025-06-02 11:51:45] 2025-06-02 18:51:32,392 | INFO     | --- collectZombieJob: --- 10, [1080526]
[2025-06-02 11:51:45] 2025-06-02 18:51:32,392 | INFO     | zombie collector waiting for pid 1080526
[2025-06-02 11:51:45] 2025-06-02 18:51:32,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-02 11:51:45] 2025-06-02 18:51:32,393 | INFO     | collected zombie processes
[2025-06-02 11:51:45] 2025-06-02 18:51:32,393 | INFO     | will attempt to kill all subprocesses of pid=1080526
[2025-06-02 11:51:45] 2025-06-02 18:51:32,528 | INFO     | process IDs to be killed: [1080526] (in reverse order)
[2025-06-02 11:51:45] 2025-06-02 18:51:32,579 | WARNING  | found no corresponding commands to process id(s)
[2025-06-02 11:51:45] 2025-06-02 18:51:32,579 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-02 11:51:45] 2025-06-02 18:51:32,585 | INFO     | did not find any defunct processes belonging to 1080526
[2025-06-02 11:51:45] 2025-06-02 18:51:32,590 | INFO     | did not find any defunct processes belonging to 1080526
[2025-06-02 11:51:45] 2025-06-02 18:51:32,590 | INFO     | ready for new job
[2025-06-02 11:51:45] 2025-06-02 18:51:32,590 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-02 11:51:45] 2025-06-02 18:51:32,592 | INFO     | **************************************
[2025-06-02 11:51:45] 2025-06-02 18:51:32,592 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-02 11:51:45] 2025-06-02 18:51:32,592 | INFO     | **************************************
[2025-06-02 11:51:45] 2025-06-02 18:51:32,592 | INFO     | 
[2025-06-02 11:51:45] 2025-06-02 18:51:32,594 | INFO     | architecture information:
[2025-06-02 11:51:45] 2025-06-02 18:51:32,594 | INFO     | executing command: cat /etc/os-release
[2025-06-02 11:51:45] 2025-06-02 18:51:32,604 | INFO     | cat /etc/os-release:
[2025-06-02 11:51:45] NAME="CentOS Linux"
[2025-06-02 11:51:45] VERSION="7 (Core)"
[2025-06-02 11:51:45] ID="centos"
[2025-06-02 11:51:45] ID_LIKE="rhel fedora"
[2025-06-02 11:51:45] VERSION_ID="7"
[2025-06-02 11:51:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-02 11:51:45] ANSI_COLOR="0;31"
[2025-06-02 11:51:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-02 11:51:45] HOME_URL="https://www.centos.org/"
[2025-06-02 11:51:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-02 11:51:45] 
[2025-06-02 11:51:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-02 11:51:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-02 11:51:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-02 11:51:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-02 11:51:45] 
[2025-06-02 11:51:45] 2025-06-02 18:51:32,604 | INFO     | **************************************
[2025-06-02 11:51:45] 2025-06-02 18:51:33,107 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-06-02 11:51:45] 2025-06-02 18:51:33,118 | INFO     | sufficient remaining disk space (1343522603008 B)
[2025-06-02 11:51:45] 2025-06-02 18:51:33,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-02 11:51:45] 2025-06-02 18:51:33,119 | INFO     | current server update state: UPDATING_FINAL
[2025-06-02 11:51:45] 2025-06-02 18:51:33,119 | INFO     | update_server=False
[2025-06-02 11:51:45] 2025-06-02 18:51:33,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-02 11:51:45] 2025-06-02 18:51:33,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-02 11:51:45] 2025-06-02 18:51:33,446 | INFO     | all job control threads have been joined
[2025-06-02 11:51:45] 2025-06-02 18:51:33,461 | INFO     | found 0 job(s) in 20 queues
[2025-06-02 11:51:45] 2025-06-02 18:51:33,461 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-02 11:51:45] 2025-06-02 18:51:33,461 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-02 11:51:45] 2025-06-02 18:51:33,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-02 11:51:45] 2025-06-02 18:51:33,830 | INFO     | aborting loop
[2025-06-02 11:51:45] 2025-06-02 18:51:34,110 | INFO     | all payload control threads have been joined
[2025-06-02 11:51:45] 2025-06-02 18:51:34,124 | INFO     | [job] retrieve thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:34,149 | INFO     | [payload] validate_pre thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:34,197 | INFO     | [payload] execute_payloads thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:34,211 | INFO     | all data control threads have been joined
[2025-06-02 11:51:45] 2025-06-02 18:51:34,246 | INFO     | [payload] validate_post thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:34,452 | INFO     | [job] control thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:34,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-02 11:51:45] 2025-06-02 18:51:34,736 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:34,813 | INFO     | [payload] failed_post thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:34,832 | INFO     | [job] job monitor thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:35,115 | INFO     | [payload] control thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:35,124 | INFO     | [data] copytool_out thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:35,217 | INFO     | [data] control thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:35,415 | INFO     | [job] validate thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:35,476 | INFO     | [data] copytool_in thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:35,558 | INFO     | [job] create_data_payload thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:36,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-02 11:51:45] 2025-06-02 18:51:37,122 | INFO     | [job] queue monitor thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:38,637 | INFO     | [data] queue_monitor thread has finished
[2025-06-02 11:51:45] 2025-06-02 18:51:39,978 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140616760657728)>', '<ExcThread(monitor, started 140615945807616)>']
[2025-06-02 11:51:45] 2025-06-02 18:51:40,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-02 11:51:45] 2025-06-02 18:51:40,490 | INFO     | [monitor] control thread has ended
[2025-06-02 11:51:45] 2025-06-02 18:51:45,004 | INFO     | all workflow threads have been joined
[2025-06-02 11:51:45] 2025-06-02 18:51:45,004 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-02 11:51:45] 2025-06-02 18:51:45,005 | INFO     | traces error code: 0
[2025-06-02 11:51:45] 2025-06-02 18:51:45,005 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-02 11:51:45] 2025-06-02 18:51:45,132 [wrapper] ==== pilot stdout END ====
[2025-06-02 11:51:45] 2025-06-02 18:51:45,134 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-02 11:51:45] 2025-06-02 18:51:45,136 [wrapper] pilotpid: 1074145
[2025-06-02 11:51:45] 2025-06-02 18:51:45,139 [wrapper] Pilot exit status: 0
[2025-06-02 11:51:45] 2025-06-02 18:51:45,146 [wrapper] pandaids: 6677380649
[2025-06-02 11:51:45] 2025-06-02 18:51:45,179 [wrapper] cleanup supervisor_pilot 1074151 1074146
[2025-06-02 11:51:45] 2025-06-02 18:51:45,181 [wrapper] Test setup, not cleaning
[2025-06-02 11:51:45] 2025-06-02 18:51:45,183 [wrapper] apfmon messages muted
[2025-06-02 11:51:45] 2025-06-02 18:51:45,185 [wrapper] ==== wrapper stdout END ====
[2025-06-02 11:51:45] 2025-06-02 18:51:45,187 [wrapper] ==== wrapper stderr END ====
[2025-06-02 11:51:45]  *** Error codes and diagnostics ***
[2025-06-02 11:51:45]     "exeErrorCode": 65,
[2025-06-02 11:51:45]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 11:51:45]     "pilotErrorCode": 1305,
[2025-06-02 11:51:45]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-06-02 11:51:45]  *** Listing of results directory ***
[2025-06-02 11:51:45] total 215920
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc    495897 Jun  2 08:48 pilot3.tar.gz
[2025-06-02 11:51:45] -rwx------. 1 boinc boinc     37140 Jun  2 08:51 runpilot2-wrapper.sh
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc      5111 Jun  2 08:53 queuedata.json
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc       100 Jun  2 11:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-02 11:51:45] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 11:48 run_atlas
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc       105 Jun  2 11:48 job.xml
[2025-06-02 11:51:45] -rw-r--r--. 2 boinc boinc 217078336 Jun  2 11:48 EVNT.45006593._000092.pool.root.1
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc      6602 Jun  2 11:48 init_data.xml
[2025-06-02 11:51:45] -rw-r--r--. 2 boinc boinc     15093 Jun  2 11:48 start_atlas.sh
[2025-06-02 11:51:45] drwxrwx--x. 2 boinc boinc      4096 Jun  2 11:48 shared
[2025-06-02 11:51:45] -rw-r--r--. 2 boinc boinc    508877 Jun  2 11:48 input.tar.gz
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc         0 Jun  2 11:48 boinc_lockfile
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc      2521 Jun  2 11:48 pandaJob.out
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc    988298 Jun  2 11:48 agis_schedconf.cvmfs.json
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc   1603667 Jun  2 11:48 agis_ddmendpoints.agis.ALL.json
[2025-06-02 11:51:45] drwx------. 4 boinc boinc      4096 Jun  2 11:48 pilot3
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc       958 Jun  2 11:49 memory_monitor_summary.json
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc     20253 Jun  2 11:49 log.45006595._002281.job.log.tgz.1
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc       523 Jun  2 11:49 boinc_task_state.xml
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc        95 Jun  2 11:50 pilot_heartbeat.json
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc      8334 Jun  2 11:51 heartbeat.json
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc      8192 Jun  2 11:51 boinc_mmap_file
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc        22 Jun  2 11:51 wrapper_checkpoint.txt
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc      4352 Jun  2 11:51 pilotlog.txt
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc     72725 Jun  2 11:51 log.45006595._002281.job.log.1
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc       188 Jun  2 11:51 output.list
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc       620 Jun  2 11:51 runtime_log
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc    112640 Jun  2 11:51 result.tar.gz
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc      8484 Jun  2 11:51 runtime_log.err
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc       643 Jun  2 11:51 5yqNDm2cMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmxgVKDmmc6V0n.diag
[2025-06-02 11:51:45] -rw-r--r--. 1 boinc boinc     21452 Jun  2 11:51 stderr.txt
[2025-06-02 11:51:45] No HITS result produced
[2025-06-02 11:51:45]  *** Contents of shared directory: ***
[2025-06-02 11:51:45] total 212624
[2025-06-02 11:51:45] -rw-r--r--. 2 boinc boinc 217078336 Jun  2 11:48 ATLAS.root_0
[2025-06-02 11:51:45] -rw-r--r--. 2 boinc boinc     15093 Jun  2 11:48 start_atlas.sh
[2025-06-02 11:51:45] -rw-r--r--. 2 boinc boinc    508877 Jun  2 11:48 input.tar.gz
[2025-06-02 11:51:45] -rw-------. 1 boinc boinc    112640 Jun  2 11:51 result.tar.gz
11:51:46 (1070556): run_atlas exited; CPU time 18.455734
11:51:46 (1070556): called boinc_finish(0)

</stderr_txt>
]]>

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