Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:48:47 (1987): wrapper (7.7.26015): starting
00:48:47 (1987): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:48:47] Arguments: --nthreads 8
[2025-06-03 00:48:47] Threads: 8
[2025-06-03 00:48:47] Checking for CVMFS
[2025-06-03 00:48:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:48:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:48:49] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:48:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:48:50] 2.11.2.0 361 30973 92796 146722 2 16 13927178 25165824 4632 130560 0 15135236 99.807 18166543 2332 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 00:48:50] CVMFS is ok
[2025-06-03 00:48:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:48:50] Checking for apptainer binary...
[2025-06-03 00:48:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:48:50] Running /usr/bin/apptainer --version
[2025-06-03 00:48:50] apptainer version 1.3.2-1.el7
[2025-06-03 00:48:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 02:26:42] cg-vwn321.simple-grid.lan
[2025-06-03 02:26:42] apptainer works
[2025-06-03 02:26:42] Set ATHENA_PROC_NUMBER=8
[2025-06-03 02:26:42] Set ATHENA_CORE_NUMBER=8
[2025-06-03 02:26:42] Starting ATLAS job with PandaID=6677382197
[2025-06-03 02:26:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:51:26]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:51:26] 2025-06-03 04:34:30,119 | INFO     | extracted standard info from prmon json
[2025-06-03 06:51:26] 2025-06-03 04:34:30,119 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:51:26] 2025-06-03 04:34:30,119 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:51:26] 2025-06-03 04:34:30,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:51:26] 2025-06-03 04:34:30,120 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:51:26] 2025-06-03 04:34:30,125 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:51:26] 2025-06-03 04:34:30,125 | INFO     | sum of square deviations: 3822136780.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,127 | INFO     | sum of deviations: 42733687494.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,127 | INFO     | mean x: 1748918109.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,128 | INFO     | mean y: 2491571.5324675324
[2025-06-03 06:51:26] 2025-06-03 04:34:30,128 | INFO     | -- intersect: -19551418773.50846
[2025-06-03 06:51:26] 2025-06-03 04:34:30,128 | INFO     | intersect: -19551418773.50846
[2025-06-03 06:51:26] 2025-06-03 04:34:30,128 | INFO     | chi2: 8.581315879070917
[2025-06-03 06:51:26] 2025-06-03 04:34:30,129 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 06:51:26] 2025-06-03 04:34:30,130 | INFO     | sum of deviations: 58307032512.00001
[2025-06-03 06:51:26] 2025-06-03 04:34:30,131 | INFO     | mean x: 1748917956.5
[2025-06-03 06:51:26] 2025-06-03 04:34:30,131 | INFO     | mean y: 2501182.353982301
[2025-06-03 06:51:26] 2025-06-03 04:34:30,131 | INFO     | -- intersect: -28487675154.49972
[2025-06-03 06:51:26] 2025-06-03 04:34:30,131 | INFO     | intersect: -28487675154.49972
[2025-06-03 06:51:26] 2025-06-03 04:34:30,131 | INFO     | chi2: 7.887543399018453
[2025-06-03 06:51:26] 2025-06-03 04:34:30,131 | INFO     | current chi2=7.887543399018453 (change=8.08468642605868 %)
[2025-06-03 06:51:26] 2025-06-03 04:34:30,131 | INFO     | right removable region: 225
[2025-06-03 06:51:26] 2025-06-03 04:34:30,132 | INFO     | sum of square deviations: 3579276412.5
[2025-06-03 06:51:26] 2025-06-03 04:34:30,134 | INFO     | sum of deviations: -41428248240.5
[2025-06-03 06:51:26] 2025-06-03 04:34:30,134 | INFO     | mean x: 1748918261.5
[2025-06-03 06:51:26] 2025-06-03 04:34:30,134 | INFO     | mean y: 2544392.190265487
[2025-06-03 06:51:26] 2025-06-03 04:34:30,134 | INFO     | -- intersect: 20245356497.09799
[2025-06-03 06:51:26] 2025-06-03 04:34:30,134 | INFO     | intersect: 20245356497.09799
[2025-06-03 06:51:26] 2025-06-03 04:34:30,134 | INFO     | chi2: 3.24810221346523
[2025-06-03 06:51:26] 2025-06-03 04:34:30,135 | INFO     | current chi2=3.24810221346523 (change=62.14913587568698 %)
[2025-06-03 06:51:26] 2025-06-03 04:34:30,135 | INFO     | sum of square deviations: 3346927870.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,137 | INFO     | sum of deviations: -93321841067.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,137 | INFO     | mean x: 1748918414.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,137 | INFO     | mean y: 2578316.4977375567
[2025-06-03 06:51:26] 2025-06-03 04:34:30,137 | INFO     | -- intersect: 48767383717.11658
[2025-06-03 06:51:26] 2025-06-03 04:34:30,137 | INFO     | intersect: 48767383717.11658
[2025-06-03 06:51:26] 2025-06-03 04:34:30,138 | INFO     | chi2: 1.088550441075733
[2025-06-03 06:51:26] 2025-06-03 04:34:30,138 | INFO     | current chi2=1.088550441075733 (change=66.48657063305852 %)
[2025-06-03 06:51:26] 2025-06-03 04:34:30,138 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,140 | INFO     | sum of deviations: -99404861717.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,140 | INFO     | mean x: 1748918566.5
[2025-06-03 06:51:26] 2025-06-03 04:34:30,140 | INFO     | mean y: 2582445.7407407407
[2025-06-03 06:51:26] 2025-06-03 04:34:30,140 | INFO     | -- intersect: 55637422631.33338
[2025-06-03 06:51:26] 2025-06-03 04:34:30,140 | INFO     | intersect: 55637422631.33338
[2025-06-03 06:51:26] 2025-06-03 04:34:30,141 | INFO     | chi2: 0.9844675634468237
[2025-06-03 06:51:26] 2025-06-03 04:34:30,141 | INFO     | current chi2=0.9844675634468237 (change=9.561603551053812 %)
[2025-06-03 06:51:26] 2025-06-03 04:34:30,141 | INFO     | left removable region: 30
[2025-06-03 06:51:26] 2025-06-03 04:34:30,141 | INFO     | sum of square deviations: 2299168690.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,143 | INFO     | sum of deviations: -68072262042.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,143 | INFO     | mean x: 1748918841.0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,143 | INFO     | mean y: 2584763.3076923075
[2025-06-03 06:51:26] 2025-06-03 04:34:30,143 | INFO     | -- intersect: 51783414135.48522
[2025-06-03 06:51:26] 2025-06-03 04:34:30,143 | INFO     | intersect: 51783414135.48522
[2025-06-03 06:51:26] 2025-06-03 04:34:30,144 | INFO     | chi2: 0.18365357983169364
[2025-06-03 06:51:26] 2025-06-03 04:34:30,144 | INFO     | -- intersect: 51783414135.48522
[2025-06-03 06:51:26] 2025-06-03 04:34:30,144 | INFO     | current memory leak: -29.61 B/s (using 195 data points, chi2=0.18)
[2025-06-03 06:51:26] 2025-06-03 04:34:30,145 | INFO     | ..............................
[2025-06-03 06:51:26] 2025-06-03 04:34:30,145 | INFO     | . Timing measurements:
[2025-06-03 06:51:26] 2025-06-03 04:34:30,145 | INFO     | . get job = 0 s
[2025-06-03 06:51:26] 2025-06-03 04:34:30,145 | INFO     | . initial setup = 9 s
[2025-06-03 06:51:26] 2025-06-03 04:34:30,145 | INFO     | . payload setup = 150 s
[2025-06-03 06:51:26] 2025-06-03 04:34:30,146 | INFO     | . stage-in = 0 s
[2025-06-03 06:51:26] 2025-06-03 04:34:30,146 | INFO     | . payload execution = 14222 s
[2025-06-03 06:51:26] 2025-06-03 04:34:30,146 | INFO     | . stage-out = 7 s
[2025-06-03 06:51:26] 2025-06-03 04:34:30,146 | INFO     | . log creation = 1 s
[2025-06-03 06:51:26] 2025-06-03 04:34:30,146 | INFO     | ..............................
[2025-06-03 06:51:26] 2025-06-03 04:34:30,402 | INFO     | 
[2025-06-03 06:51:26] 2025-06-03 04:34:30,402 | INFO     | job summary report
[2025-06-03 06:51:26] 2025-06-03 04:34:30,402 | INFO     | --------------------------------------------------
[2025-06-03 06:51:26] 2025-06-03 04:34:30,402 | INFO     | PanDA job id: 6677382197
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | task id: 45006595
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | errors: (none)
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | pilot state: finished 
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | transexitcode: 0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | exeerrorcode: 0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | exeerrordiag: 
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | exitcode: 0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | exitmsg: OK
[2025-06-03 06:51:26] 2025-06-03 04:34:30,403 | INFO     | cpuconsumptiontime: 51221 s
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | nevents: 400
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | neventsw: 0
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | pid: 5786
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | pgrp: 5786
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | corecount: 8
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | event service: False
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | sizes: {0: 2404350, 1: 2405035, 2: 2405234, 12: 2405234, 23: 2405262, 34: 2405290, 44: 2405446, 55: 2405474, 66: 2405502, 77: 2405530, 87: 2405586, 95: 2406100, 98
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | --------------------------------------------------
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | 
[2025-06-03 06:51:26] 2025-06-03 04:34:30,404 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 06:51:26] 2025-06-03 04:34:30,530 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,530 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,530 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,530 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,530 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,530 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,531 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,532 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,532 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:51:26] 2025-06-03 04:34:30,532 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,532 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:51:26] 2025-06-03 04:34:30,532 | INFO     | job 6677382197 has completed (purged errors)
[2025-06-03 06:51:26] 2025-06-03 04:34:30,532 | INFO     | overall cleanup function is called
[2025-06-03 06:51:26] 2025-06-03 04:34:31,542 | INFO     | --- collectZombieJob: --- 10, [5786]
[2025-06-03 06:51:26] 2025-06-03 04:34:31,542 | INFO     | zombie collector waiting for pid 5786
[2025-06-03 06:51:26] 2025-06-03 04:34:31,542 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:51:26] 2025-06-03 04:34:31,542 | INFO     | collected zombie processes
[2025-06-03 06:51:26] 2025-06-03 04:34:31,543 | INFO     | will attempt to kill all subprocesses of pid=5786
[2025-06-03 06:51:26] 2025-06-03 04:34:31,662 | INFO     | process IDs to be killed: [5786] (in reverse order)
[2025-06-03 06:51:26] 2025-06-03 04:34:32,540 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:51:26] 2025-06-03 04:34:32,541 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:51:26] 2025-06-03 04:34:32,544 | INFO     | did not find any defunct processes belonging to 5786
[2025-06-03 06:51:26] 2025-06-03 04:34:32,547 | INFO     | did not find any defunct processes belonging to 5786
[2025-06-03 06:51:26] 2025-06-03 04:34:32,548 | INFO     | ready for new job
[2025-06-03 06:51:26] 2025-06-03 04:34:32,548 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:51:26] 2025-06-03 04:34:32,550 | INFO     | **************************************
[2025-06-03 06:51:26] 2025-06-03 04:34:32,550 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:51:26] 2025-06-03 04:34:32,550 | INFO     | **************************************
[2025-06-03 06:51:26] 2025-06-03 04:34:32,550 | INFO     | 
[2025-06-03 06:51:26] 2025-06-03 04:34:32,551 | INFO     | pilot is running in a VM
[2025-06-03 06:51:26] 2025-06-03 04:34:32,551 | INFO     | architecture information:
[2025-06-03 06:51:26] 2025-06-03 04:34:32,563 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:51:26] 2025-06-03 04:34:32,892 | INFO     | cat /etc/os-release:
[2025-06-03 06:51:26] NAME="CentOS Linux"
[2025-06-03 06:51:26] VERSION="7 (Core)"
[2025-06-03 06:51:26] ID="centos"
[2025-06-03 06:51:26] ID_LIKE="rhel fedora"
[2025-06-03 06:51:26] VERSION_ID="7"
[2025-06-03 06:51:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:51:26] ANSI_COLOR="0;31"
[2025-06-03 06:51:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:51:26] HOME_URL="https://www.centos.org/"
[2025-06-03 06:51:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:51:26] 
[2025-06-03 06:51:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:51:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:51:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:51:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:51:26] 
[2025-06-03 06:51:26] 2025-06-03 04:34:32,892 | INFO     | **************************************
[2025-06-03 06:51:26] 2025-06-03 04:34:33,396 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 06:51:26] 2025-06-03 04:34:33,572 | INFO     | sufficient remaining disk space (496831037440 B)
[2025-06-03 06:51:26] 2025-06-03 04:34:33,573 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:51:26] 2025-06-03 04:34:33,573 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:51:26] 2025-06-03 04:34:33,573 | INFO     | update_server=False
[2025-06-03 06:51:26] 2025-06-03 04:34:33,573 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:51:26] 2025-06-03 04:34:33,574 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 06:51:26] 2025-06-03 04:34:33,574 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:51:26] 2025-06-03 04:34:33,575 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:51:26] 2025-06-03 04:34:33,575 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:51:26] 2025-06-03 04:34:33,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:51:26] 2025-06-03 04:34:33,586 | INFO     | aborting loop
[2025-06-03 06:51:26] 2025-06-03 04:34:33,808 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:51:26] 2025-06-03 04:34:34,058 | INFO     | all payload control threads have been joined
[2025-06-03 06:51:26] 2025-06-03 04:34:34,322 | INFO     | all data control threads have been joined
[2025-06-03 06:51:26] 2025-06-03 04:34:34,579 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:34,592 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:34,672 | INFO     | all job control threads have been joined
[2025-06-03 06:51:26] 2025-06-03 04:34:35,064 | INFO     | [payload] control thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,130 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,187 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,309 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:51:26] 2025-06-03 04:34:35,326 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,328 | INFO     | [data] control thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,371 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,559 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,673 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,677 | INFO     | [job] control thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,745 | INFO     | [job] validate thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:35,814 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:36,154 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:36,315 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:36,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:51:26] 2025-06-03 04:34:40,989 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:51:26] 2025-06-03 04:34:42,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140313716950848)>', '<ExcThread(monitor, started 140313268045568)>']
[2025-06-03 06:51:26] 2025-06-03 04:34:42,629 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:51:26] 2025-06-03 04:34:42,629 | INFO     | [monitor] control thread has ended
[2025-06-03 06:51:26] 2025-06-03 04:34:47,364 | INFO     | all workflow threads have been joined
[2025-06-03 06:51:26] 2025-06-03 04:34:47,364 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:51:26] 2025-06-03 04:34:47,365 | INFO     | traces error code: 0
[2025-06-03 06:51:26] 2025-06-03 04:34:47,365 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:51:26] 2025-06-03 04:34:47,683 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:51:26] 2025-06-03 04:34:47,762 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:51:26] 2025-06-03 04:34:47,809 [wrapper] pilotpid: 28095
[2025-06-03 06:51:26] 2025-06-03 04:34:47,860 [wrapper] Pilot exit status: 0
[2025-06-03 06:51:26] 2025-06-03 04:34:48,322 [wrapper] pandaids: 6677382197
[2025-06-03 06:51:26] 2025-06-03 04:34:49,204 [wrapper] cleanup supervisor_pilot 11662 28096
[2025-06-03 06:51:26] 2025-06-03 04:34:49,281 [wrapper] Test setup, not cleaning
[2025-06-03 06:51:26] 2025-06-03 04:34:49,347 [wrapper] apfmon messages muted
[2025-06-03 06:51:26] 2025-06-03 04:34:49,460 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:51:26] 2025-06-03 04:34:49,555 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:51:26]  *** Error codes and diagnostics ***
[2025-06-03 06:51:26]     "exeErrorCode": 0,
[2025-06-03 06:51:26]     "exeErrorDiag": "",
[2025-06-03 06:51:26]     "pilotErrorCode": 0,
[2025-06-03 06:51:26]     "pilotErrorDiag": "",
[2025-06-03 06:51:26]  *** Listing of results directory ***
[2025-06-03 06:51:26] total 394484
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-03 06:51:26] -rwx------. 1 boinc boinc     37140 Jun  2 18:03 runpilot2-wrapper.sh
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:51:26] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:48 run_atlas
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:48 job.xml
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc      6391 Jun  3 00:48 init_data.xml
[2025-06-03 06:51:26] -rw-r--r--. 2 boinc boinc 213472499 Jun  3 00:48 EVNT.45006593._000118.pool.root.1
[2025-06-03 06:51:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:48 start_atlas.sh
[2025-06-03 06:51:26] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:48 shared
[2025-06-03 06:51:26] -rw-r--r--. 2 boinc boinc    508880 Jun  3 00:48 input.tar.gz
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:48 boinc_lockfile
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc      2522 Jun  3 02:26 pandaJob.out
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc    988081 Jun  3 02:30 agis_schedconf.cvmfs.json
[2025-06-03 06:51:26] drwx------. 4 boinc boinc      4096 Jun  3 02:30 pilot3
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc 183355716 Jun  3 06:31 HITS.45006595._002947.pool.root.1
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc       531 Jun  3 06:31 boinc_task_state.xml
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc      1018 Jun  3 06:32 memory_monitor_summary.json
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc   1603667 Jun  3 06:32 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc    398000 Jun  3 06:32 log.45006595._002947.job.log.tgz.1
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc        95 Jun  3 06:33 pilot_heartbeat.json
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc      7708 Jun  3 06:34 heartbeat.json
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc      4539 Jun  3 06:34 pilotlog.txt
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc   1251241 Jun  3 06:34 log.45006595._002947.job.log.1
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc       357 Jun  3 06:34 output.list
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:34 runtime_log
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc   1669120 Jun  3 06:34 result.tar.gz
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc       656 Jun  3 06:34 t7FMDmznMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmflVKDmlBAJTm.diag
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc      8659 Jun  3 06:34 runtime_log.err
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:51 boinc_mmap_file
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:51 wrapper_checkpoint.txt
[2025-06-03 06:51:26] -rw-r--r--. 1 boinc boinc     20475 Jun  3 06:51 stderr.txt
[2025-06-03 06:51:26] HITS file was successfully produced:
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc 183355716 Jun  3 06:31 shared/HITS.pool.root.1
[2025-06-03 06:51:26]  *** Contents of shared directory: ***
[2025-06-03 06:51:26] total 389680
[2025-06-03 06:51:26] -rw-r--r--. 2 boinc boinc 213472499 Jun  3 00:48 ATLAS.root_0
[2025-06-03 06:51:26] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:48 start_atlas.sh
[2025-06-03 06:51:26] -rw-r--r--. 2 boinc boinc    508880 Jun  3 00:48 input.tar.gz
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc 183355716 Jun  3 06:31 HITS.pool.root.1
[2025-06-03 06:51:26] -rw-------. 1 boinc boinc   1669120 Jun  3 06:34 result.tar.gz
06:51:28 (1987): run_atlas exited; CPU time 51420.258717
06:51:28 (1987): called boinc_finish(0)

</stderr_txt>
]]>

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