Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:33:13 (19450): wrapper (7.7.26015): starting
20:33:13 (19450): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:33:13] Arguments: --nthreads 8
[2025-06-02 20:33:13] Threads: 8
[2025-06-02 20:33:13] Checking for CVMFS
[2025-06-02 20:33:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:33:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:33:15] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:33:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:33:15] 2.11.2.0 361 30717 93736 146716 1 102 13672470 25165825 4264 130560 0 14979099 99.805 18040283 2325 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 20:33:15] CVMFS is ok
[2025-06-02 20:33:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:33:15] Checking for apptainer binary...
[2025-06-02 20:33:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:33:15] Running /usr/bin/apptainer --version
[2025-06-02 20:33:16] apptainer version 1.3.2-1.el7
[2025-06-02 20:33:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:33:18] cg-vwn321.simple-grid.lan
[2025-06-02 20:33:18] apptainer works
[2025-06-02 20:33:18] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:33:18] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:33:18] Starting ATLAS job with PandaID=6677382276
[2025-06-02 20:33:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 00:48:42]  *** The last 200 lines of the pilot log: ***
[2025-06-03 00:48:42] 2025-06-02 22:09:18,394 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 00:48:42] 2025-06-02 22:09:18,394 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 00:48:42] 2025-06-02 22:09:18,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 00:48:42] 2025-06-02 22:09:18,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:48:42] 2025-06-02 22:09:18,399 | INFO     | fitting pss+swap vs Time
[2025-06-03 00:48:42] 2025-06-02 22:09:18,400 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 00:48:42] 2025-06-02 22:09:18,402 | INFO     | sum of deviations: -22767063153.5
[2025-06-03 00:48:42] 2025-06-02 22:09:18,402 | INFO     | mean x: 1748895661.5
[2025-06-03 00:48:42] 2025-06-02 22:09:18,402 | INFO     | mean y: 2496535.9095238093
[2025-06-03 00:48:42] 2025-06-02 22:09:18,403 | INFO     | -- intersect: 13868281238.371075
[2025-06-03 00:48:42] 2025-06-02 22:09:18,403 | INFO     | intersect: 13868281238.371075
[2025-06-03 00:48:42] 2025-06-02 22:09:18,403 | INFO     | chi2: 2.544279306484894
[2025-06-03 00:48:42] 2025-06-02 22:09:18,404 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,405 | INFO     | sum of deviations: -8347099212.0000105
[2025-06-03 00:48:42] 2025-06-02 22:09:18,406 | INFO     | mean x: 1748895509.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,406 | INFO     | mean y: 2507313.4536585365
[2025-06-03 00:48:42] 2025-06-02 22:09:18,406 | INFO     | -- intersect: 5467250599.479637
[2025-06-03 00:48:42] 2025-06-02 22:09:18,406 | INFO     | intersect: 5467250599.479637
[2025-06-03 00:48:42] 2025-06-02 22:09:18,407 | INFO     | chi2: 1.779252450337422
[2025-06-03 00:48:42] 2025-06-02 22:09:18,407 | INFO     | current chi2=1.779252450337422 (change=30.068509152967636 %)
[2025-06-03 00:48:42] 2025-06-02 22:09:18,407 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,409 | INFO     | sum of deviations: -7959615377.999998
[2025-06-03 00:48:42] 2025-06-02 22:09:18,409 | INFO     | mean x: 1748895356.5
[2025-06-03 00:48:42] 2025-06-02 22:09:18,409 | INFO     | mean y: 2507623.3
[2025-06-03 00:48:42] 2025-06-02 22:09:18,409 | INFO     | -- intersect: 5614258118.934276
[2025-06-03 00:48:42] 2025-06-02 22:09:18,409 | INFO     | intersect: 5614258118.934276
[2025-06-03 00:48:42] 2025-06-02 22:09:18,410 | INFO     | chi2: 1.7787616919486795
[2025-06-03 00:48:42] 2025-06-02 22:09:18,410 | INFO     | current chi2=1.7787616919486795 (change=0.027582279774267277 %)
[2025-06-03 00:48:42] 2025-06-02 22:09:18,410 | INFO     | right removable region: 199
[2025-06-03 00:48:42] 2025-06-02 22:09:18,410 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,412 | INFO     | sum of deviations: -57593895542.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,412 | INFO     | mean x: 1748895814.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,412 | INFO     | mean y: 2522810.7902439022
[2025-06-03 00:48:42] 2025-06-02 22:09:18,413 | INFO     | -- intersect: 37708545091.60353
[2025-06-03 00:48:42] 2025-06-02 22:09:18,413 | INFO     | intersect: 37708545091.60353
[2025-06-03 00:48:42] 2025-06-02 22:09:18,413 | INFO     | chi2: 0.9918443925750439
[2025-06-03 00:48:42] 2025-06-02 22:09:18,413 | INFO     | current chi2=0.9918443925750439 (change=61.01668594139734 %)
[2025-06-03 00:48:42] 2025-06-02 22:09:18,414 | INFO     | sum of square deviations: 2480604650.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,415 | INFO     | sum of deviations: -53780390963.49998
[2025-06-03 00:48:42] 2025-06-02 22:09:18,415 | INFO     | mean x: 1748895966.5
[2025-06-03 00:48:42] 2025-06-02 22:09:18,415 | INFO     | mean y: 2519730.175
[2025-06-03 00:48:42] 2025-06-02 22:09:18,415 | INFO     | -- intersect: 37919206225.484985
[2025-06-03 00:48:42] 2025-06-02 22:09:18,416 | INFO     | intersect: 37919206225.484985
[2025-06-03 00:48:42] 2025-06-02 22:09:18,416 | INFO     | chi2: 0.9822040704675625
[2025-06-03 00:48:42] 2025-06-02 22:09:18,416 | INFO     | current chi2=0.9822040704675625 (change=0.9719591278277999 %)
[2025-06-03 00:48:42] 2025-06-02 22:09:18,416 | INFO     | left removable region: 20
[2025-06-03 00:48:42] 2025-06-02 22:09:18,416 | INFO     | sum of square deviations: 1778377530.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,418 | INFO     | sum of deviations: -25444560035.000004
[2025-06-03 00:48:42] 2025-06-02 22:09:18,418 | INFO     | mean x: 1748895936.0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,418 | INFO     | mean y: 2520618.122905028
[2025-06-03 00:48:42] 2025-06-02 22:09:18,418 | INFO     | -- intersect: 25025265725.861378
[2025-06-03 00:48:42] 2025-06-02 22:09:18,418 | INFO     | intersect: 25025265725.861378
[2025-06-03 00:48:42] 2025-06-02 22:09:18,418 | INFO     | chi2: 0.16139034622731654
[2025-06-03 00:48:42] 2025-06-02 22:09:18,418 | INFO     | -- intersect: 25025265725.861378
[2025-06-03 00:48:42] 2025-06-02 22:09:18,419 | INFO     | current memory leak: -14.31 B/s (using 179 data points, chi2=0.16)
[2025-06-03 00:48:42] 2025-06-02 22:09:18,419 | INFO     | ..............................
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | . Timing measurements:
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | . get job = 0 s
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | . initial setup = 2 s
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | . payload setup = 14 s
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | . stage-in = 0 s
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | . payload execution = 12789 s
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | . stage-out = 4 s
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | . log creation = 1 s
[2025-06-03 00:48:42] 2025-06-02 22:09:18,420 | INFO     | ..............................
[2025-06-03 00:48:42] 2025-06-02 22:09:18,635 | INFO     | 
[2025-06-03 00:48:42] 2025-06-02 22:09:18,635 | INFO     | job summary report
[2025-06-03 00:48:42] 2025-06-02 22:09:18,635 | INFO     | --------------------------------------------------
[2025-06-03 00:48:42] 2025-06-02 22:09:18,635 | INFO     | PanDA job id: 6677382276
[2025-06-03 00:48:42] 2025-06-02 22:09:18,635 | INFO     | task id: 45006595
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | errors: (none)
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | pilot state: finished 
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | transexitcode: 0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | exeerrorcode: 0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | exeerrordiag: 
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | exitcode: 0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | exitmsg: OK
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | cpuconsumptiontime: 48247 s
[2025-06-03 00:48:42] 2025-06-02 22:09:18,636 | INFO     | nevents: 400
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | neventsw: 0
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | pid: 1673
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | pgrp: 1673
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | corecount: 8
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | event service: False
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | sizes: {0: 2404951, 1: 2405206, 2: 2405206, 11: 2405440, 12: 2405468, 12807: 2434640, 12808: 2434767, 12812: 2443820, 12907: 2443934}
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | --------------------------------------------------
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | 
[2025-06-03 00:48:42] 2025-06-02 22:09:18,637 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 00:48:42] 2025-06-02 22:09:19,050 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,050 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,050 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,051 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | job 6677382276 has completed (purged errors)
[2025-06-03 00:48:42] 2025-06-02 22:09:19,052 | INFO     | overall cleanup function is called
[2025-06-03 00:48:42] 2025-06-02 22:09:19,805 | INFO     | 12935s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-06-03 00:48:42] 2025-06-02 22:09:20,062 | INFO     | --- collectZombieJob: --- 10, [1673]
[2025-06-03 00:48:42] 2025-06-02 22:09:20,062 | INFO     | zombie collector waiting for pid 1673
[2025-06-03 00:48:42] 2025-06-02 22:09:20,062 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 00:48:42] 2025-06-02 22:09:20,062 | INFO     | collected zombie processes
[2025-06-03 00:48:42] 2025-06-02 22:09:20,062 | INFO     | will attempt to kill all subprocesses of pid=1673
[2025-06-03 00:48:42] 2025-06-02 22:09:20,193 | INFO     | process IDs to be killed: [1673] (in reverse order)
[2025-06-03 00:48:42] 2025-06-02 22:09:20,784 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 00:48:42] 2025-06-02 22:09:20,785 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 00:48:42] 2025-06-02 22:09:20,788 | INFO     | did not find any defunct processes belonging to 1673
[2025-06-03 00:48:42] 2025-06-02 22:09:20,791 | INFO     | did not find any defunct processes belonging to 1673
[2025-06-03 00:48:42] 2025-06-02 22:09:20,792 | INFO     | ready for new job
[2025-06-03 00:48:42] 2025-06-02 22:09:20,792 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 00:48:42] 2025-06-02 22:09:20,794 | INFO     | **************************************
[2025-06-03 00:48:42] 2025-06-02 22:09:20,794 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 00:48:42] 2025-06-02 22:09:20,794 | INFO     | **************************************
[2025-06-03 00:48:42] 2025-06-02 22:09:20,794 | INFO     | 
[2025-06-03 00:48:42] 2025-06-02 22:09:20,795 | INFO     | pilot is running in a VM
[2025-06-03 00:48:42] 2025-06-02 22:09:20,795 | INFO     | architecture information:
[2025-06-03 00:48:42] 2025-06-02 22:09:20,807 | INFO     | executing command: cat /etc/os-release
[2025-06-03 00:48:42] 2025-06-02 22:09:21,016 | INFO     | cat /etc/os-release:
[2025-06-03 00:48:42] NAME="CentOS Linux"
[2025-06-03 00:48:42] VERSION="7 (Core)"
[2025-06-03 00:48:42] ID="centos"
[2025-06-03 00:48:42] ID_LIKE="rhel fedora"
[2025-06-03 00:48:42] VERSION_ID="7"
[2025-06-03 00:48:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 00:48:42] ANSI_COLOR="0;31"
[2025-06-03 00:48:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 00:48:42] HOME_URL="https://www.centos.org/"
[2025-06-03 00:48:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 00:48:42] 
[2025-06-03 00:48:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 00:48:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 00:48:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 00:48:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 00:48:42] 
[2025-06-03 00:48:42] 2025-06-02 22:09:21,016 | INFO     | **************************************
[2025-06-03 00:48:42] 2025-06-02 22:09:21,519 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 00:48:42] 2025-06-02 22:09:21,808 | INFO     | sufficient remaining disk space (497048092672 B)
[2025-06-03 00:48:42] 2025-06-02 22:09:21,808 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 00:48:42] 2025-06-02 22:09:21,808 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 00:48:42] 2025-06-02 22:09:21,808 | INFO     | update_server=False
[2025-06-03 00:48:42] 2025-06-02 22:09:21,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 00:48:42] 2025-06-02 22:09:21,809 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 00:48:42] 2025-06-02 22:09:21,813 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 00:48:42] 2025-06-02 22:09:21,813 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 00:48:42] 2025-06-02 22:09:21,813 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 00:48:42] 2025-06-02 22:09:21,813 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 00:48:42] 2025-06-02 22:09:21,999 | INFO     | all data control threads have been joined
[2025-06-03 00:48:42] 2025-06-02 22:09:22,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:48:42] 2025-06-02 22:09:22,607 | INFO     | aborting loop
[2025-06-03 00:48:42] 2025-06-02 22:09:22,815 | INFO     | [job] retrieve thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:22,824 | INFO     | [job] validate thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,005 | INFO     | [data] control thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,228 | INFO     | [payload] failed_post thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,239 | INFO     | all job control threads have been joined
[2025-06-03 00:48:42] 2025-06-02 22:09:23,240 | INFO     | all payload control threads have been joined
[2025-06-03 00:48:42] 2025-06-02 22:09:23,243 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:48:42] 2025-06-02 22:09:23,613 | INFO     | [job] job monitor thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,800 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,816 | INFO     | [data] copytool_out thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,820 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,914 | INFO     | [data] copytool_in thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:23,932 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 00:48:42] 2025-06-02 22:09:24,038 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:24,245 | INFO     | [job] control thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:24,246 | INFO     | [payload] control thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:24,316 | INFO     | [payload] validate_post thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:24,583 | INFO     | [job] queue monitor thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:27,941 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 00:48:42] 2025-06-02 22:09:29,726 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140648150267712)>', '<ExcThread(monitor, started 140647495366400)>']
[2025-06-03 00:48:42] 2025-06-02 22:09:29,862 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 00:48:42] 2025-06-02 22:09:29,862 | INFO     | [monitor] control thread has ended
[2025-06-03 00:48:42] 2025-06-02 22:09:34,752 | INFO     | all workflow threads have been joined
[2025-06-03 00:48:42] 2025-06-02 22:09:34,752 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 00:48:42] 2025-06-02 22:09:34,752 | INFO     | traces error code: 0
[2025-06-03 00:48:42] 2025-06-02 22:09:34,753 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 00:48:42] 2025-06-02 22:09:35,087 [wrapper] ==== pilot stdout END ====
[2025-06-03 00:48:42] 2025-06-02 22:09:35,159 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 00:48:42] 2025-06-02 22:09:35,268 [wrapper] pilotpid: 23476
[2025-06-03 00:48:42] 2025-06-02 22:09:35,369 [wrapper] Pilot exit status: 0
[2025-06-03 00:48:42] 2025-06-02 22:09:35,886 [wrapper] pandaids: 6677382276
[2025-06-03 00:48:42] 2025-06-02 22:09:36,518 [wrapper] cleanup supervisor_pilot  8742 23477
[2025-06-03 00:48:42] 2025-06-02 22:09:36,594 [wrapper] Test setup, not cleaning
[2025-06-03 00:48:42] 2025-06-02 22:09:36,683 [wrapper] apfmon messages muted
[2025-06-03 00:48:42] 2025-06-02 22:09:36,732 [wrapper] ==== wrapper stdout END ====
[2025-06-03 00:48:42] 2025-06-02 22:09:36,808 [wrapper] ==== wrapper stderr END ====
[2025-06-03 00:48:42]  *** Error codes and diagnostics ***
[2025-06-03 00:48:42]     "exeErrorCode": 0,
[2025-06-03 00:48:42]     "exeErrorDiag": "",
[2025-06-03 00:48:42]     "pilotErrorCode": 0,
[2025-06-03 00:48:42]     "pilotErrorDiag": "",
[2025-06-03 00:48:42]  *** Listing of results directory ***
[2025-06-03 00:48:42] total 385428
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-03 00:48:42] -rwx------. 1 boinc boinc     37140 Jun  2 18:03 runpilot2-wrapper.sh
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 00:48:42] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:33 run_atlas
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:33 job.xml
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc      6391 Jun  2 20:33 init_data.xml
[2025-06-03 00:48:42] -rw-r--r--. 2 boinc boinc 213101199 Jun  2 20:33 EVNT.45006593._000119.pool.root.1
[2025-06-03 00:48:42] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:33 start_atlas.sh
[2025-06-03 00:48:42] drwxrwx--x. 2 boinc boinc        68 Jun  2 20:33 shared
[2025-06-03 00:48:42] -rw-r--r--. 2 boinc boinc    508881 Jun  2 20:33 input.tar.gz
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:33 boinc_lockfile
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc      2522 Jun  2 20:33 pandaJob.out
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc    988298 Jun  2 20:33 agis_schedconf.cvmfs.json
[2025-06-03 00:48:42] drwx------. 4 boinc boinc      4096 Jun  2 20:33 pilot3
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc 174775840 Jun  3 00:06 HITS.45006595._002959.pool.root.1
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc       530 Jun  3 00:06 boinc_task_state.xml
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc      1017 Jun  3 00:07 memory_monitor_summary.json
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc   1603667 Jun  3 00:07 agis_ddmendpoints.agis.ALL.json
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc    368928 Jun  3 00:07 log.45006595._002959.job.log.tgz.1
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc        95 Jun  3 00:09 pilot_heartbeat.json
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc      7686 Jun  3 00:09 heartbeat.json
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc      4539 Jun  3 00:09 pilotlog.txt
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc   1121349 Jun  3 00:09 log.45006595._002959.job.log.1
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc       357 Jun  3 00:09 output.list
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc       620 Jun  3 00:09 runtime_log
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc   1505280 Jun  3 00:09 result.tar.gz
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc      8659 Jun  3 00:09 runtime_log.err
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc       656 Jun  3 00:09 95UMDmznMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqlVKDm379Xdn.diag
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc      8192 Jun  3 00:48 boinc_mmap_file
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc        28 Jun  3 00:48 wrapper_checkpoint.txt
[2025-06-03 00:48:42] -rw-r--r--. 1 boinc boinc     20502 Jun  3 00:48 stderr.txt
[2025-06-03 00:48:42] HITS file was successfully produced:
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc 174775840 Jun  3 00:06 shared/HITS.pool.root.1
[2025-06-03 00:48:42]  *** Contents of shared directory: ***
[2025-06-03 00:48:42] total 380776
[2025-06-03 00:48:42] -rw-r--r--. 2 boinc boinc 213101199 Jun  2 20:33 ATLAS.root_0
[2025-06-03 00:48:42] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:33 start_atlas.sh
[2025-06-03 00:48:42] -rw-r--r--. 2 boinc boinc    508881 Jun  2 20:33 input.tar.gz
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc 174775840 Jun  3 00:06 HITS.pool.root.1
[2025-06-03 00:48:42] -rw-------. 1 boinc boinc   1505280 Jun  3 00:09 result.tar.gz
00:48:44 (19450): run_atlas exited; CPU time 48406.600249
00:48:44 (19450): called boinc_finish(0)

</stderr_txt>
]]>

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