Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:32:13 (10473): wrapper (7.7.26015): starting
01:32:13 (10473): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:32:13] Arguments: --nthreads 8
[2025-06-03 01:32:13] Threads: 8
[2025-06-03 01:32:13] Checking for CVMFS
[2025-06-03 01:32:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:32:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:32:14] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:32:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:32:14] 2.11.2.0 29033 31008 91880 146722 0 155 14390007 25165824 4053 130560 0 16495801 99.803 18205596 2038 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 01:32:14] CVMFS is ok
[2025-06-03 01:32:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:32:14] Checking for apptainer binary...
[2025-06-03 01:32:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:32:14] Running /usr/bin/apptainer --version
[2025-06-03 01:32:14] apptainer version 1.3.2-1.el7
[2025-06-03 01:32:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:32:16] cg-vwn393.simple-grid.lan
[2025-06-03 01:32:16] apptainer works
[2025-06-03 01:32:16] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:32:16] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:32:16] Starting ATLAS job with PandaID=6677378479
[2025-06-03 01:32:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 10:06:12]  *** The last 200 lines of the pilot log: ***
[2025-06-03 10:06:12] 2025-06-03 03:02:53,975 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 10:06:12] 2025-06-03 03:02:53,976 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 10:06:12] 2025-06-03 03:02:53,976 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 10:06:12] 2025-06-03 03:02:53,980 | INFO     | fitting pss+swap vs Time
[2025-06-03 10:06:12] 2025-06-03 03:02:53,981 | INFO     | sum of square deviations: 2632440055.0
[2025-06-03 10:06:12] 2025-06-03 03:02:53,985 | INFO     | sum of deviations: 2683514013.000019
[2025-06-03 10:06:12] 2025-06-03 03:02:53,985 | INFO     | mean x: 1748913452.5
[2025-06-03 10:06:12] 2025-06-03 03:02:53,986 | INFO     | mean y: 2466541.0490196077
[2025-06-03 10:06:12] 2025-06-03 03:02:53,986 | INFO     | -- intersect: -1780378902.4374394
[2025-06-03 10:06:12] 2025-06-03 03:02:53,986 | INFO     | intersect: -1780378902.4374394
[2025-06-03 10:06:12] 2025-06-03 03:02:53,986 | INFO     | chi2: 2.6538452269137953
[2025-06-03 10:06:12] 2025-06-03 03:02:53,987 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 10:06:12] 2025-06-03 03:02:53,988 | INFO     | sum of deviations: 15919546003.999998
[2025-06-03 10:06:12] 2025-06-03 03:02:53,990 | INFO     | mean x: 1748913300.0
[2025-06-03 10:06:12] 2025-06-03 03:02:53,991 | INFO     | mean y: 2477014.5075376886
[2025-06-03 10:06:12] 2025-06-03 03:02:53,991 | INFO     | -- intersect: -11391419547.35246
[2025-06-03 10:06:12] 2025-06-03 03:02:53,991 | INFO     | intersect: -11391419547.35246
[2025-06-03 10:06:12] 2025-06-03 03:02:53,991 | INFO     | chi2: 1.8928315655506909
[2025-06-03 10:06:12] 2025-06-03 03:02:53,991 | INFO     | current chi2=1.8928315655506909 (change=28.67588711072277 %)
[2025-06-03 10:06:12] 2025-06-03 03:02:53,992 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 10:06:12] 2025-06-03 03:02:53,993 | INFO     | sum of deviations: 15553565249.499983
[2025-06-03 10:06:12] 2025-06-03 03:02:53,993 | INFO     | mean x: 1748913147.5
[2025-06-03 10:06:12] 2025-06-03 03:02:53,994 | INFO     | mean y: 2476703.68556701
[2025-06-03 10:06:12] 2025-06-03 03:02:53,994 | INFO     | -- intersect: -12012588272.831656
[2025-06-03 10:06:12] 2025-06-03 03:02:53,994 | INFO     | intersect: -12012588272.831656
[2025-06-03 10:06:12] 2025-06-03 03:02:53,994 | INFO     | chi2: 1.8942366616856003
[2025-06-03 10:06:12] 2025-06-03 03:02:53,994 | INFO     | current chi2=1.8942366616856003 (change=-0.07423249698927518 %)
[2025-06-03 10:06:12] 2025-06-03 03:02:53,994 | INFO     | right removable region: 193
[2025-06-03 10:06:12] 2025-06-03 03:02:53,995 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 10:06:12] 2025-06-03 03:02:53,996 | INFO     | sum of deviations: -34047538631.0
[2025-06-03 10:06:12] 2025-06-03 03:02:53,996 | INFO     | mean x: 1748913605.0
[2025-06-03 10:06:12] 2025-06-03 03:02:53,996 | INFO     | mean y: 2495938.67839196
[2025-06-03 10:06:12] 2025-06-03 03:02:53,997 | INFO     | -- intersect: 24370917054.67385
[2025-06-03 10:06:12] 2025-06-03 03:02:53,997 | INFO     | intersect: 24370917054.67385
[2025-06-03 10:06:12] 2025-06-03 03:02:53,997 | INFO     | chi2: 0.9340898357131207
[2025-06-03 10:06:12] 2025-06-03 03:02:53,997 | INFO     | current chi2=0.9340898357131207 (change=64.80239969384384 %)
[2025-06-03 10:06:12] 2025-06-03 03:02:53,998 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 10:06:12] 2025-06-03 03:02:53,999 | INFO     | sum of deviations: -33961127342.5
[2025-06-03 10:06:12] 2025-06-03 03:02:53,999 | INFO     | mean x: 1748913757.5
[2025-06-03 10:06:12] 2025-06-03 03:02:53,999 | INFO     | mean y: 2495820.994845361
[2025-06-03 10:06:12] 2025-06-03 03:02:54,000 | INFO     | -- intersect: 26237335709.572956
[2025-06-03 10:06:12] 2025-06-03 03:02:54,000 | INFO     | intersect: 26237335709.572956
[2025-06-03 10:06:12] 2025-06-03 03:02:54,000 | INFO     | chi2: 0.9186434729680402
[2025-06-03 10:06:12] 2025-06-03 03:02:54,001 | INFO     | current chi2=0.9186434729680402 (change=1.6536271089266412 %)
[2025-06-03 10:06:12] 2025-06-03 03:02:54,001 | INFO     | left removable region: 20
[2025-06-03 10:06:12] 2025-06-03 03:02:54,001 | INFO     | sum of square deviations: 1605470102.0
[2025-06-03 10:06:12] 2025-06-03 03:02:54,002 | INFO     | sum of deviations: -7372729497.999999
[2025-06-03 10:06:12] 2025-06-03 03:02:54,002 | INFO     | mean x: 1748913727.0
[2025-06-03 10:06:12] 2025-06-03 03:02:54,002 | INFO     | mean y: 2495281.5895953756
[2025-06-03 10:06:12] 2025-06-03 03:02:54,003 | INFO     | -- intersect: 8033954608.329532
[2025-06-03 10:06:12] 2025-06-03 03:02:54,003 | INFO     | intersect: 8033954608.329532
[2025-06-03 10:06:12] 2025-06-03 03:02:54,003 | INFO     | chi2: 0.07508994959500456
[2025-06-03 10:06:12] 2025-06-03 03:02:54,003 | INFO     | -- intersect: 8033954608.329532
[2025-06-03 10:06:12] 2025-06-03 03:02:54,003 | INFO     | current memory leak: -4.59 B/s (using 173 data points, chi2=0.08)
[2025-06-03 10:06:12] 2025-06-03 03:02:54,004 | INFO     | ..............................
[2025-06-03 10:06:12] 2025-06-03 03:02:54,004 | INFO     | . Timing measurements:
[2025-06-03 10:06:12] 2025-06-03 03:02:54,005 | INFO     | . get job = 0 s
[2025-06-03 10:06:12] 2025-06-03 03:02:54,005 | INFO     | . initial setup = 2 s
[2025-06-03 10:06:12] 2025-06-03 03:02:54,005 | INFO     | . payload setup = 29 s
[2025-06-03 10:06:12] 2025-06-03 03:02:54,005 | INFO     | . stage-in = 0 s
[2025-06-03 10:06:12] 2025-06-03 03:02:54,005 | INFO     | . payload execution = 12444 s
[2025-06-03 10:06:12] 2025-06-03 03:02:54,005 | INFO     | . stage-out = 4 s
[2025-06-03 10:06:12] 2025-06-03 03:02:54,005 | INFO     | . log creation = 1 s
[2025-06-03 10:06:12] 2025-06-03 03:02:54,005 | INFO     | ..............................
[2025-06-03 10:06:12] 2025-06-03 03:02:54,135 | INFO     | 
[2025-06-03 10:06:12] 2025-06-03 03:02:54,135 | INFO     | job summary report
[2025-06-03 10:06:12] 2025-06-03 03:02:54,135 | INFO     | --------------------------------------------------
[2025-06-03 10:06:12] 2025-06-03 03:02:54,135 | INFO     | PanDA job id: 6677378479
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | task id: 45006595
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | errors: (none)
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | pilot state: finished 
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | transexitcode: 0
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | exeerrorcode: 0
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | exeerrordiag: 
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | exitcode: 0
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | exitmsg: OK
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | cpuconsumptiontime: 47184 s
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | nevents: 400
[2025-06-03 10:06:12] 2025-06-03 03:02:54,136 | INFO     | neventsw: 0
[2025-06-03 10:06:12] 2025-06-03 03:02:54,137 | INFO     | pid: 29776
[2025-06-03 10:06:12] 2025-06-03 03:02:54,137 | INFO     | pgrp: 29776
[2025-06-03 10:06:12] 2025-06-03 03:02:54,137 | INFO     | corecount: 8
[2025-06-03 10:06:12] 2025-06-03 03:02:54,137 | INFO     | event service: False
[2025-06-03 10:06:12] 2025-06-03 03:02:54,137 | INFO     | sizes: {0: 2404348, 1: 2405204, 2: 2405204, 12: 2405232, 20: 2405466, 23: 2405494, 12478: 2434654, 12479: 2434653, 12483: 2443650, 12485: 2443706, 12577: 2443876}
[2025-06-03 10:06:12] 2025-06-03 03:02:54,137 | INFO     | --------------------------------------------------
[2025-06-03 10:06:12] 2025-06-03 03:02:54,137 | INFO     | 
[2025-06-03 10:06:12] 2025-06-03 03:02:54,137 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-06-03 10:06:12] 2025-06-03 03:02:54,680 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,681 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,681 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,681 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,681 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,681 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,681 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,681 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,681 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 10:06:12] 2025-06-03 03:02:54,682 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,683 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 10:06:12] 2025-06-03 03:02:54,683 | INFO     | job 6677378479 has completed (purged errors)
[2025-06-03 10:06:12] 2025-06-03 03:02:54,683 | INFO     | overall cleanup function is called
[2025-06-03 10:06:12] 2025-06-03 03:02:55,692 | INFO     | --- collectZombieJob: --- 10, [29776]
[2025-06-03 10:06:12] 2025-06-03 03:02:55,693 | INFO     | zombie collector waiting for pid 29776
[2025-06-03 10:06:12] 2025-06-03 03:02:55,693 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 10:06:12] 2025-06-03 03:02:55,693 | INFO     | collected zombie processes
[2025-06-03 10:06:12] 2025-06-03 03:02:55,693 | INFO     | will attempt to kill all subprocesses of pid=29776
[2025-06-03 10:06:12] 2025-06-03 03:02:55,805 | INFO     | process IDs to be killed: [29776] (in reverse order)
[2025-06-03 10:06:12] 2025-06-03 03:02:56,670 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 10:06:12] 2025-06-03 03:02:56,671 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 10:06:12] 2025-06-03 03:02:56,674 | INFO     | did not find any defunct processes belonging to 29776
[2025-06-03 10:06:12] 2025-06-03 03:02:56,677 | INFO     | did not find any defunct processes belonging to 29776
[2025-06-03 10:06:12] 2025-06-03 03:02:56,677 | INFO     | ready for new job
[2025-06-03 10:06:12] 2025-06-03 03:02:56,678 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 10:06:12] 2025-06-03 03:02:56,679 | INFO     | **************************************
[2025-06-03 10:06:12] 2025-06-03 03:02:56,680 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 10:06:12] 2025-06-03 03:02:56,680 | INFO     | **************************************
[2025-06-03 10:06:12] 2025-06-03 03:02:56,680 | INFO     | 
[2025-06-03 10:06:12] 2025-06-03 03:02:56,681 | INFO     | pilot is running in a VM
[2025-06-03 10:06:12] 2025-06-03 03:02:56,681 | INFO     | architecture information:
[2025-06-03 10:06:12] 2025-06-03 03:02:56,695 | INFO     | executing command: cat /etc/os-release
[2025-06-03 10:06:12] 2025-06-03 03:02:56,970 | INFO     | cat /etc/os-release:
[2025-06-03 10:06:12] NAME="CentOS Linux"
[2025-06-03 10:06:12] VERSION="7 (Core)"
[2025-06-03 10:06:12] ID="centos"
[2025-06-03 10:06:12] ID_LIKE="rhel fedora"
[2025-06-03 10:06:12] VERSION_ID="7"
[2025-06-03 10:06:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 10:06:12] ANSI_COLOR="0;31"
[2025-06-03 10:06:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 10:06:12] HOME_URL="https://www.centos.org/"
[2025-06-03 10:06:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 10:06:12] 
[2025-06-03 10:06:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 10:06:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 10:06:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 10:06:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 10:06:12] 
[2025-06-03 10:06:12] 2025-06-03 03:02:56,971 | INFO     | **************************************
[2025-06-03 10:06:12] 2025-06-03 03:02:57,474 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-06-03 10:06:12] 2025-06-03 03:02:57,762 | INFO     | sufficient remaining disk space (496845717504 B)
[2025-06-03 10:06:12] 2025-06-03 03:02:57,763 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 10:06:12] 2025-06-03 03:02:57,763 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 10:06:12] 2025-06-03 03:02:57,763 | INFO     | update_server=False
[2025-06-03 10:06:12] 2025-06-03 03:02:57,763 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 10:06:12] 2025-06-03 03:02:57,770 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 10:06:12] 2025-06-03 03:02:57,770 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 10:06:12] 2025-06-03 03:02:57,770 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 10:06:12] 2025-06-03 03:02:57,770 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 10:06:12] 2025-06-03 03:02:58,187 | INFO     | all data control threads have been joined
[2025-06-03 10:06:12] 2025-06-03 03:02:58,244 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 10:06:12] 2025-06-03 03:02:58,244 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 10:06:12] 2025-06-03 03:02:58,244 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:06:12] 2025-06-03 03:02:58,244 | INFO     | will abort loop
[2025-06-03 10:06:12] 2025-06-03 03:02:58,316 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 10:06:12] 2025-06-03 03:02:58,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 10:06:12] 2025-06-03 03:02:58,769 | INFO     | [job] retrieve thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:02:59,043 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:02:59,129 | INFO     | [job] validate thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:02:59,150 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 10:06:12] 2025-06-03 03:02:59,189 | INFO     | all payload control threads have been joined
[2025-06-03 10:06:12] 2025-06-03 03:02:59,193 | INFO     | [data] control thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:02:59,251 | INFO     | [job] job monitor thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:02:59,265 | INFO     | [data] copytool_in thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:02:59,317 | INFO     | all job control threads have been joined
[2025-06-03 10:06:12] 2025-06-03 03:02:59,505 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:02:59,522 | INFO     | [payload] validate_post thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:02:59,957 | INFO     | [payload] failed_post thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:03:00,014 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:03:00,099 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:03:00,156 | INFO     | [job] queue monitor thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:03:00,196 | INFO     | [payload] control thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:03:00,324 | INFO     | [job] control thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:03:00,327 | INFO     | [data] copytool_out thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:03:02,336 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 10:06:12] 2025-06-03 03:03:02,825 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140183241463616)>', '<ExcThread(monitor, started 140182363830016)>']
[2025-06-03 10:06:12] 2025-06-03 03:03:03,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 10:06:12] 2025-06-03 03:03:03,807 | INFO     | [monitor] control thread has ended
[2025-06-03 10:06:12] 2025-06-03 03:03:07,850 | INFO     | all workflow threads have been joined
[2025-06-03 10:06:12] 2025-06-03 03:03:07,851 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 10:06:12] 2025-06-03 03:03:07,851 | INFO     | traces error code: 0
[2025-06-03 10:06:12] 2025-06-03 03:03:07,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 10:06:12] 2025-06-03 03:03:08,279 [wrapper] ==== pilot stdout END ====
[2025-06-03 10:06:12] 2025-06-03 03:03:08,331 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 10:06:12] 2025-06-03 03:03:08,367 [wrapper] pilotpid: 16578
[2025-06-03 10:06:12] 2025-06-03 03:03:08,441 [wrapper] Pilot exit status: 0
[2025-06-03 10:06:12] 2025-06-03 03:03:08,837 [wrapper] pandaids: 6677378479
[2025-06-03 10:06:12] 2025-06-03 03:03:09,771 [wrapper] cleanup supervisor_pilot 13271 16579
[2025-06-03 10:06:12] 2025-06-03 03:03:09,838 [wrapper] Test setup, not cleaning
[2025-06-03 10:06:12] 2025-06-03 03:03:09,924 [wrapper] apfmon messages muted
[2025-06-03 10:06:12] 2025-06-03 03:03:10,035 [wrapper] ==== wrapper stdout END ====
[2025-06-03 10:06:12] 2025-06-03 03:03:10,126 [wrapper] ==== wrapper stderr END ====
[2025-06-03 10:06:12]  *** Error codes and diagnostics ***
[2025-06-03 10:06:12]     "exeErrorCode": 0,
[2025-06-03 10:06:12]     "exeErrorDiag": "",
[2025-06-03 10:06:12]     "pilotErrorCode": 0,
[2025-06-03 10:06:12]     "pilotErrorDiag": "",
[2025-06-03 10:06:12]  *** Listing of results directory ***
[2025-06-03 10:06:12] total 387412
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 10:06:12] -rwx------. 1 boinc boinc     37140 Jun  2 17:49 runpilot2-wrapper.sh
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:49 queuedata.json
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc       100 Jun  3 01:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 10:06:12] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 01:32 run_atlas
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc       105 Jun  3 01:32 job.xml
[2025-06-03 10:06:12] -rw-r--r--. 2 boinc boinc 214745963 Jun  3 01:32 EVNT.45006593._000048.pool.root.1
[2025-06-03 10:06:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:32 start_atlas.sh
[2025-06-03 10:06:12] drwxrwx--x. 2 boinc boinc        68 Jun  3 01:32 shared
[2025-06-03 10:06:12] -rw-r--r--. 2 boinc boinc    508873 Jun  3 01:32 input.tar.gz
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc      6392 Jun  3 01:32 init_data.xml
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc         0 Jun  3 01:32 boinc_lockfile
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc      2521 Jun  3 01:32 pandaJob.out
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc    988091 Jun  3 01:32 agis_schedconf.cvmfs.json
[2025-06-03 10:06:12] drwx------. 4 boinc boinc      4096 Jun  3 01:32 pilot3
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc 175223680 Jun  3 04:59 HITS.45006595._001186.pool.root.1
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc       531 Jun  3 05:00 boinc_task_state.xml
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc      1015 Jun  3 05:01 memory_monitor_summary.json
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc   1603667 Jun  3 05:01 agis_ddmendpoints.agis.ALL.json
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc    366721 Jun  3 05:01 log.45006595._001186.job.log.tgz.1
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc      7675 Jun  3 05:02 heartbeat.json
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc        95 Jun  3 05:02 pilot_heartbeat.json
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc      4725 Jun  3 05:03 pilotlog.txt
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc   1092502 Jun  3 05:03 log.45006595._001186.job.log.1
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc       357 Jun  3 05:03 output.list
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc       620 Jun  3 05:03 runtime_log
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc   1474560 Jun  3 05:03 result.tar.gz
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc      8659 Jun  3 05:03 runtime_log.err
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc       656 Jun  3 05:03 7vmNDmtaMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm40eKDm9dtU9m.diag
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc      8192 Jun  3 10:06 boinc_mmap_file
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc        28 Jun  3 10:06 wrapper_checkpoint.txt
[2025-06-03 10:06:12] -rw-r--r--. 1 boinc boinc     20540 Jun  3 10:06 stderr.txt
[2025-06-03 10:06:12] HITS file was successfully produced:
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc 175223680 Jun  3 04:59 shared/HITS.pool.root.1
[2025-06-03 10:06:12]  *** Contents of shared directory: ***
[2025-06-03 10:06:12] total 382792
[2025-06-03 10:06:12] -rw-r--r--. 2 boinc boinc 214745963 Jun  3 01:32 ATLAS.root_0
[2025-06-03 10:06:12] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:32 start_atlas.sh
[2025-06-03 10:06:12] -rw-r--r--. 2 boinc boinc    508873 Jun  3 01:32 input.tar.gz
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc 175223680 Jun  3 04:59 HITS.pool.root.1
[2025-06-03 10:06:12] -rw-------. 1 boinc boinc   1474560 Jun  3 05:03 result.tar.gz
10:06:14 (10473): run_atlas exited; CPU time 47343.926120
10:06:14 (10473): called boinc_finish(0)

</stderr_txt>
]]>

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