Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:19:46 (27509): wrapper (7.7.26015): starting
00:19:46 (27509): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:19:46] Arguments: --nthreads 8
[2025-06-03 00:19:46] Threads: 8
[2025-06-03 00:19:46] Checking for CVMFS
[2025-06-03 00:19:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:19:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:19:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:19:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:19:48] 2.11.2.0 11156 30934 92752 146718 2 155 23104363 25165825 4633 130560 0 15009376 99.740 19395610 2058 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 00:19:48] CVMFS is ok
[2025-06-03 00:19:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:19:48] Checking for apptainer binary...
[2025-06-03 00:19:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:19:48] Running /usr/bin/apptainer --version
[2025-06-03 00:19:48] apptainer version 1.3.2-1.el7
[2025-06-03 00:19:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 00:23:32] cg-vwn264.simple-grid.lan
[2025-06-03 00:23:32] apptainer works
[2025-06-03 00:23:33] Set ATHENA_PROC_NUMBER=8
[2025-06-03 00:23:33] Set ATHENA_CORE_NUMBER=8
[2025-06-03 00:23:33] Starting ATLAS job with PandaID=6677380297
[2025-06-03 00:23:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/27 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:49:08]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:49:08] 2025-06-03 02:05:12,377 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 04:49:08] 2025-06-03 02:05:12,377 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:49:08] 2025-06-03 02:05:12,378 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:49:08] 2025-06-03 02:05:12,382 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:49:08] 2025-06-03 02:05:12,383 | INFO     | sum of square deviations: 3124858590.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,384 | INFO     | sum of deviations: -2088984070.5000095
[2025-06-03 04:49:08] 2025-06-03 02:05:12,385 | INFO     | mean x: 1748909646.5
[2025-06-03 04:49:08] 2025-06-03 02:05:12,385 | INFO     | mean y: 2458404.6342592593
[2025-06-03 04:49:08] 2025-06-03 02:05:12,385 | INFO     | -- intersect: 1171613515.8363643
[2025-06-03 04:49:08] 2025-06-03 02:05:12,385 | INFO     | intersect: 1171613515.8363643
[2025-06-03 04:49:08] 2025-06-03 02:05:12,385 | INFO     | chi2: 3.349116205228047
[2025-06-03 04:49:08] 2025-06-03 02:05:12,386 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,393 | INFO     | sum of deviations: 26827148642.000004
[2025-06-03 04:49:08] 2025-06-03 02:05:12,394 | INFO     | mean x: 1748909494.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,394 | INFO     | mean y: 2478910.0047393367
[2025-06-03 04:49:08] 2025-06-03 02:05:12,394 | INFO     | -- intersect: -16104934894.22896
[2025-06-03 04:49:08] 2025-06-03 02:05:12,394 | INFO     | intersect: -16104934894.22896
[2025-06-03 04:49:08] 2025-06-03 02:05:12,394 | INFO     | chi2: 1.6984785699716947
[2025-06-03 04:49:08] 2025-06-03 02:05:12,394 | INFO     | current chi2=1.6984785699716947 (change=49.285767770006586 %)
[2025-06-03 04:49:08] 2025-06-03 02:05:12,395 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 04:49:08] 2025-06-03 02:05:12,396 | INFO     | sum of deviations: 26083912899.499996
[2025-06-03 04:49:08] 2025-06-03 02:05:12,397 | INFO     | mean x: 1748909341.5
[2025-06-03 04:49:08] 2025-06-03 02:05:12,397 | INFO     | mean y: 2478349.373786408
[2025-06-03 04:49:08] 2025-06-03 02:05:12,397 | INFO     | -- intersect: -16826981912.80511
[2025-06-03 04:49:08] 2025-06-03 02:05:12,397 | INFO     | intersect: -16826981912.80511
[2025-06-03 04:49:08] 2025-06-03 02:05:12,397 | INFO     | chi2: 1.6996723450189712
[2025-06-03 04:49:08] 2025-06-03 02:05:12,397 | INFO     | current chi2=1.6996723450189712 (change=-0.07028496375414817 %)
[2025-06-03 04:49:08] 2025-06-03 02:05:12,397 | INFO     | right removable region: 205
[2025-06-03 04:49:08] 2025-06-03 02:05:12,398 | INFO     | sum of square deviations: 2912836010.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,399 | INFO     | sum of deviations: -38405731821.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,399 | INFO     | mean x: 1748909799.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,399 | INFO     | mean y: 2484290.9194312794
[2025-06-03 04:49:08] 2025-06-03 02:05:12,400 | INFO     | -- intersect: 23061853403.673916
[2025-06-03 04:49:08] 2025-06-03 02:05:12,400 | INFO     | intersect: 23061853403.673916
[2025-06-03 04:49:08] 2025-06-03 02:05:12,400 | INFO     | chi2: 1.790422136453683
[2025-06-03 04:49:08] 2025-06-03 02:05:12,400 | INFO     | current chi2=1.790422136453683 (change=46.54045943049712 %)
[2025-06-03 04:49:08] 2025-06-03 02:05:12,401 | INFO     | sum of square deviations: 2710627567.5
[2025-06-03 04:49:08] 2025-06-03 02:05:12,402 | INFO     | sum of deviations: -35043551023.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,402 | INFO     | mean x: 1748909951.5
[2025-06-03 04:49:08] 2025-06-03 02:05:12,402 | INFO     | mean y: 2481713.475728155
[2025-06-03 04:49:08] 2025-06-03 02:05:12,402 | INFO     | -- intersect: 22612749481.300568
[2025-06-03 04:49:08] 2025-06-03 02:05:12,402 | INFO     | intersect: 22612749481.300568
[2025-06-03 04:49:08] 2025-06-03 02:05:12,403 | INFO     | chi2: 1.7730737630340057
[2025-06-03 04:49:08] 2025-06-03 02:05:12,403 | INFO     | current chi2=1.7730737630340057 (change=0.968954363692102 %)
[2025-06-03 04:49:08] 2025-06-03 02:05:12,403 | INFO     | left removable region: 20
[2025-06-03 04:49:08] 2025-06-03 02:05:12,403 | INFO     | sum of square deviations: 1963274020.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,405 | INFO     | sum of deviations: 4123628120.9999995
[2025-06-03 04:49:08] 2025-06-03 02:05:12,405 | INFO     | mean x: 1748909921.0
[2025-06-03 04:49:08] 2025-06-03 02:05:12,405 | INFO     | mean y: 2494203.945945946
[2025-06-03 04:49:08] 2025-06-03 02:05:12,405 | INFO     | -- intersect: -3670887126.354288
[2025-06-03 04:49:08] 2025-06-03 02:05:12,405 | INFO     | intersect: -3670887126.354288
[2025-06-03 04:49:08] 2025-06-03 02:05:12,405 | INFO     | chi2: 0.0016033622596293704
[2025-06-03 04:49:08] 2025-06-03 02:05:12,406 | INFO     | -- intersect: -3670887126.354288
[2025-06-03 04:49:08] 2025-06-03 02:05:12,406 | INFO     | current memory leak: 2.10 B/s (using 185 data points, chi2=0.00)
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | ..............................
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | . Timing measurements:
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | . get job = 0 s
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | . initial setup = 2 s
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | . payload setup = 14 s
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | . stage-in = 0 s
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | . payload execution = 13140 s
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | . stage-out = 2 s
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | . log creation = 0 s
[2025-06-03 04:49:08] 2025-06-03 02:05:12,407 | INFO     | ..............................
[2025-06-03 04:49:08] 2025-06-03 02:05:13,161 | INFO     | 
[2025-06-03 04:49:08] 2025-06-03 02:05:13,162 | INFO     | job summary report
[2025-06-03 04:49:08] 2025-06-03 02:05:13,162 | INFO     | --------------------------------------------------
[2025-06-03 04:49:08] 2025-06-03 02:05:13,162 | INFO     | PanDA job id: 6677380297
[2025-06-03 04:49:08] 2025-06-03 02:05:13,162 | INFO     | task id: 45006595
[2025-06-03 04:49:08] 2025-06-03 02:05:13,162 | INFO     | errors: (none)
[2025-06-03 04:49:08] 2025-06-03 02:05:13,162 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:49:08] 2025-06-03 02:05:13,162 | INFO     | pilot state: finished 
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | transexitcode: 0
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | exeerrorcode: 0
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | exeerrordiag: 
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | exitcode: 0
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | exitmsg: OK
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | cpuconsumptiontime: 49302 s
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | nevents: 400
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | neventsw: 0
[2025-06-03 04:49:08] 2025-06-03 02:05:13,163 | INFO     | pid: 12772
[2025-06-03 04:49:08] 2025-06-03 02:05:13,164 | INFO     | pgrp: 12772
[2025-06-03 04:49:08] 2025-06-03 02:05:13,164 | INFO     | corecount: 8
[2025-06-03 04:49:08] 2025-06-03 02:05:13,164 | INFO     | event service: False
[2025-06-03 04:49:08] 2025-06-03 02:05:13,164 | INFO     | sizes: {0: 2405177, 1: 2405177, 8: 2405411, 12: 2405439, 13159: 2434943, 13162: 2443886, 13163: 2444070, 13259: 2444240}
[2025-06-03 04:49:08] 2025-06-03 02:05:13,164 | INFO     | --------------------------------------------------
[2025-06-03 04:49:08] 2025-06-03 02:05:13,164 | INFO     | 
[2025-06-03 04:49:08] 2025-06-03 02:05:13,164 | INFO     | executing command: ls -lF /var/lib/boinc/slots/27
[2025-06-03 04:49:08] 2025-06-03 02:05:13,764 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,764 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,764 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,764 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,765 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,766 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,766 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,766 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,766 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:49:08] 2025-06-03 02:05:13,766 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,766 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:49:08] 2025-06-03 02:05:13,766 | INFO     | job 6677380297 has completed (purged errors)
[2025-06-03 04:49:08] 2025-06-03 02:05:13,766 | INFO     | overall cleanup function is called
[2025-06-03 04:49:08] 2025-06-03 02:05:14,775 | INFO     | --- collectZombieJob: --- 10, [12772]
[2025-06-03 04:49:08] 2025-06-03 02:05:14,776 | INFO     | zombie collector waiting for pid 12772
[2025-06-03 04:49:08] 2025-06-03 02:05:14,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:49:08] 2025-06-03 02:05:14,776 | INFO     | collected zombie processes
[2025-06-03 04:49:08] 2025-06-03 02:05:14,776 | INFO     | will attempt to kill all subprocesses of pid=12772
[2025-06-03 04:49:08] 2025-06-03 02:05:14,892 | INFO     | process IDs to be killed: [12772] (in reverse order)
[2025-06-03 04:49:08] 2025-06-03 02:05:15,632 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:49:08] 2025-06-03 02:05:15,632 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:49:08] 2025-06-03 02:05:15,636 | INFO     | did not find any defunct processes belonging to 12772
[2025-06-03 04:49:08] 2025-06-03 02:05:15,639 | INFO     | did not find any defunct processes belonging to 12772
[2025-06-03 04:49:08] 2025-06-03 02:05:15,640 | INFO     | ready for new job
[2025-06-03 04:49:08] 2025-06-03 02:05:15,640 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:49:08] 2025-06-03 02:05:15,642 | INFO     | **************************************
[2025-06-03 04:49:08] 2025-06-03 02:05:15,642 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:49:08] 2025-06-03 02:05:15,642 | INFO     | **************************************
[2025-06-03 04:49:08] 2025-06-03 02:05:15,642 | INFO     | 
[2025-06-03 04:49:08] 2025-06-03 02:05:15,643 | INFO     | pilot is running in a VM
[2025-06-03 04:49:08] 2025-06-03 02:05:15,643 | INFO     | architecture information:
[2025-06-03 04:49:08] 2025-06-03 02:05:15,643 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:49:08] 2025-06-03 02:05:15,906 | INFO     | cat /etc/os-release:
[2025-06-03 04:49:08] NAME="CentOS Linux"
[2025-06-03 04:49:08] VERSION="7 (Core)"
[2025-06-03 04:49:08] ID="centos"
[2025-06-03 04:49:08] ID_LIKE="rhel fedora"
[2025-06-03 04:49:08] VERSION_ID="7"
[2025-06-03 04:49:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:49:08] ANSI_COLOR="0;31"
[2025-06-03 04:49:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:49:08] HOME_URL="https://www.centos.org/"
[2025-06-03 04:49:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:49:08] 
[2025-06-03 04:49:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:49:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:49:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:49:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:49:08] 
[2025-06-03 04:49:08] 2025-06-03 02:05:15,906 | INFO     | **************************************
[2025-06-03 04:49:08] 2025-06-03 02:05:16,422 | INFO     | executing command: df -mP /var/lib/boinc/slots/27
[2025-06-03 04:49:08] 2025-06-03 02:05:16,436 | INFO     | PID=4175 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-06-03 04:49:08] 2025-06-03 02:05:16,437 | INFO     | .. there are 9 such processes running
[2025-06-03 04:49:08] 2025-06-03 02:05:16,594 | INFO     | sufficient remaining disk space (496948477952 B)
[2025-06-03 04:49:08] 2025-06-03 02:05:16,594 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:49:08] 2025-06-03 02:05:16,594 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:49:08] 2025-06-03 02:05:16,594 | INFO     | update_server=False
[2025-06-03 04:49:08] 2025-06-03 02:05:16,595 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:49:08] 2025-06-03 02:05:16,595 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 04:49:08] 2025-06-03 02:05:16,595 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:49:08] 2025-06-03 02:05:16,595 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:49:08] 2025-06-03 02:05:16,595 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:49:08] 2025-06-03 02:05:16,848 | INFO     | all payload control threads have been joined
[2025-06-03 04:49:08] 2025-06-03 02:05:17,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:49:08] 2025-06-03 02:05:17,103 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:49:08] 2025-06-03 02:05:17,104 | INFO     | aborting loop
[2025-06-03 04:49:08] 2025-06-03 02:05:17,546 | INFO     | all data control threads have been joined
[2025-06-03 04:49:08] 2025-06-03 02:05:17,601 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:17,857 | INFO     | [payload] control thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,095 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,097 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,099 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:49:08] 2025-06-03 02:05:18,110 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:49:08] 2025-06-03 02:05:18,229 | INFO     | all job control threads have been joined
[2025-06-03 04:49:08] 2025-06-03 02:05:18,397 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,552 | INFO     | [data] control thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,593 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,833 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,860 | INFO     | [job] validate thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:18,939 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:19,016 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:19,089 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:19,181 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:19,235 | INFO     | [job] control thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:22,108 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:49:08] 2025-06-03 02:05:22,242 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139740767496000)>', '<ExcThread(monitor, started 139740091238144)>']
[2025-06-03 04:49:08] 2025-06-03 02:05:22,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:49:08] 2025-06-03 02:05:22,632 | INFO     | [monitor] control thread has ended
[2025-06-03 04:49:08] 2025-06-03 02:05:27,268 | INFO     | all workflow threads have been joined
[2025-06-03 04:49:08] 2025-06-03 02:05:27,269 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:49:08] 2025-06-03 02:05:27,269 | INFO     | traces error code: 0
[2025-06-03 04:49:08] 2025-06-03 02:05:27,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:49:08] 2025-06-03 02:05:27,535 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:49:08] 2025-06-03 02:05:27,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:49:08] 2025-06-03 02:05:27,681 [wrapper] pilotpid: 4175
[2025-06-03 04:49:08] 2025-06-03 02:05:27,719 [wrapper] Pilot exit status: 0
[2025-06-03 04:49:08] 2025-06-03 02:05:28,227 [wrapper] pandaids: 6677380297
[2025-06-03 04:49:08] 2025-06-03 02:05:28,986 [wrapper] cleanup supervisor_pilot  1784 4176
[2025-06-03 04:49:08] 2025-06-03 02:05:29,067 [wrapper] Test setup, not cleaning
[2025-06-03 04:49:08] 2025-06-03 02:05:29,123 [wrapper] apfmon messages muted
[2025-06-03 04:49:08] 2025-06-03 02:05:29,256 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:49:08] 2025-06-03 02:05:29,369 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:49:08]  *** Error codes and diagnostics ***
[2025-06-03 04:49:08]     "exeErrorCode": 0,
[2025-06-03 04:49:08]     "exeErrorDiag": "",
[2025-06-03 04:49:08]     "pilotErrorCode": 0,
[2025-06-03 04:49:08]     "pilotErrorDiag": "",
[2025-06-03 04:49:08]  *** Listing of results directory ***
[2025-06-03 04:49:08] total 394956
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-03 04:49:08] -rwx------. 1 boinc boinc     37140 Jun  2 17:51 runpilot2-wrapper.sh
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc      5111 Jun  2 17:53 queuedata.json
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:49:08] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:19 run_atlas
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:19 job.xml
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc      6392 Jun  3 00:19 init_data.xml
[2025-06-03 04:49:08] -rw-r--r--. 2 boinc boinc 214809569 Jun  3 00:19 EVNT.45006593._000082.pool.root.1
[2025-06-03 04:49:08] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:19 start_atlas.sh
[2025-06-03 04:49:08] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:19 shared
[2025-06-03 04:49:08] -rw-r--r--. 2 boinc boinc    508873 Jun  3 00:19 input.tar.gz
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:19 boinc_lockfile
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc      2521 Jun  3 00:23 pandaJob.out
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc    987975 Jun  3 00:23 agis_schedconf.cvmfs.json
[2025-06-03 04:49:08] drwx------. 4 boinc boinc      4096 Jun  3 00:23 pilot3
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc 182734901 Jun  3 04:02 HITS.45006595._002038.pool.root.1
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc       530 Jun  3 04:02 boinc_task_state.xml
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc      1019 Jun  3 04:03 memory_monitor_summary.json
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc   1603667 Jun  3 04:03 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc    375673 Jun  3 04:03 log.45006595._002038.job.log.tgz.1
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc        95 Jun  3 04:05 pilot_heartbeat.json
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc      7684 Jun  3 04:05 heartbeat.json
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc      4931 Jun  3 04:05 pilotlog.txt
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc   1156339 Jun  3 04:05 log.45006595._002038.job.log.1
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc       357 Jun  3 04:05 output.list
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc       620 Jun  3 04:05 runtime_log
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc   1546240 Jun  3 04:05 result.tar.gz
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc       656 Jun  3 04:05 TA9KDmscMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmNeVKDmSSMbTm.diag
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc      8673 Jun  3 04:05 runtime_log.err
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc      8192 Jun  3 04:49 boinc_mmap_file
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc        28 Jun  3 04:49 wrapper_checkpoint.txt
[2025-06-03 04:49:08] -rw-r--r--. 1 boinc boinc     20592 Jun  3 04:49 stderr.txt
[2025-06-03 04:49:08] HITS file was successfully produced:
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc 182734901 Jun  3 04:02 shared/HITS.pool.root.1
[2025-06-03 04:49:08]  *** Contents of shared directory: ***
[2025-06-03 04:49:08] total 390260
[2025-06-03 04:49:08] -rw-r--r--. 2 boinc boinc 214809569 Jun  3 00:19 ATLAS.root_0
[2025-06-03 04:49:08] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:19 start_atlas.sh
[2025-06-03 04:49:08] -rw-r--r--. 2 boinc boinc    508873 Jun  3 00:19 input.tar.gz
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc 182734901 Jun  3 04:02 HITS.pool.root.1
[2025-06-03 04:49:08] -rw-------. 1 boinc boinc   1546240 Jun  3 04:05 result.tar.gz
04:49:10 (27509): run_atlas exited; CPU time 49467.485493
04:49:10 (27509): called boinc_finish(0)

</stderr_txt>
]]>

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