Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:23:29 (12958): wrapper (7.7.26015): starting
20:23:29 (12958): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:23:29] Arguments: --nthreads 8
[2025-06-02 20:23:29] Threads: 8
[2025-06-02 20:23:29] Checking for CVMFS
[2025-06-02 20:23:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:23:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:23:30] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:23:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:23:31] 2.11.2.0 8420 30698 92084 146716 0 16 13717692 25165825 4632 130560 0 15563596 99.813 17850830 2065 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 20:23:31] CVMFS is ok
[2025-06-02 20:23:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:23:31] Checking for apptainer binary...
[2025-06-02 20:23:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:23:31] Running /usr/bin/apptainer --version
[2025-06-02 20:23:31] apptainer version 1.3.2-1.el7
[2025-06-02 20:23:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:23:46] cg-vwn396.simple-grid.lan
[2025-06-02 20:23:46] apptainer works
[2025-06-02 20:23:46] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:23:46] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:23:46] Starting ATLAS job with PandaID=6677381813
[2025-06-02 20:23:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 00:37:32]  *** The last 200 lines of the pilot log: ***
[2025-06-03 00:37:32] 2025-06-02 22:22:22,440 | INFO     | extracted standard info from prmon json
[2025-06-03 00:37:32] 2025-06-02 22:22:22,440 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 00:37:32] 2025-06-02 22:22:22,440 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 00:37:32] 2025-06-02 22:22:22,440 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 00:37:32] 2025-06-02 22:22:22,440 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:37:32] 2025-06-02 22:22:22,445 | INFO     | fitting pss+swap vs Time
[2025-06-03 00:37:32] 2025-06-02 22:22:22,446 | INFO     | sum of square deviations: 3392567795.5
[2025-06-03 00:37:32] 2025-06-02 22:22:22,447 | INFO     | sum of deviations: -11647297788.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,448 | INFO     | mean x: 1748896081.5
[2025-06-03 00:37:32] 2025-06-02 22:22:22,448 | INFO     | mean y: 2490405.891891892
[2025-06-03 00:37:32] 2025-06-02 22:22:22,448 | INFO     | -- intersect: 6006766426.113524
[2025-06-03 00:37:32] 2025-06-02 22:22:22,448 | INFO     | intersect: 6006766426.113524
[2025-06-03 00:37:32] 2025-06-02 22:22:22,448 | INFO     | chi2: 3.0881500538608933
[2025-06-03 00:37:32] 2025-06-02 22:22:22,449 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,451 | INFO     | sum of deviations: 3871817864.0000067
[2025-06-03 00:37:32] 2025-06-02 22:22:22,451 | INFO     | mean x: 1748895929.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,451 | INFO     | mean y: 2500776.4976958525
[2025-06-03 00:37:32] 2025-06-02 22:22:22,451 | INFO     | -- intersect: -2134626973.3558922
[2025-06-03 00:37:32] 2025-06-02 22:22:22,451 | INFO     | intersect: -2134626973.3558922
[2025-06-03 00:37:32] 2025-06-02 22:22:22,452 | INFO     | chi2: 2.2593401141168696
[2025-06-03 00:37:32] 2025-06-02 22:22:22,452 | INFO     | current chi2=2.2593401141168696 (change=26.83839597456807 %)
[2025-06-03 00:37:32] 2025-06-02 22:22:22,452 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,454 | INFO     | sum of deviations: 3852124806.9999957
[2025-06-03 00:37:32] 2025-06-02 22:22:22,454 | INFO     | mean x: 1748895776.5
[2025-06-03 00:37:32] 2025-06-02 22:22:22,454 | INFO     | mean y: 2500762.537735849
[2025-06-03 00:37:32] 2025-06-02 22:22:22,454 | INFO     | -- intersect: -2277777960.488112
[2025-06-03 00:37:32] 2025-06-02 22:22:22,454 | INFO     | intersect: -2277777960.488112
[2025-06-03 00:37:32] 2025-06-02 22:22:22,455 | INFO     | chi2: 2.2598921399783816
[2025-06-03 00:37:32] 2025-06-02 22:22:22,455 | INFO     | current chi2=2.2598921399783816 (change=-0.024433057159599217 %)
[2025-06-03 00:37:32] 2025-06-02 22:22:22,455 | INFO     | right removable region: 211
[2025-06-03 00:37:32] 2025-06-02 22:22:22,455 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,457 | INFO     | sum of deviations: -55956880205.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,457 | INFO     | mean x: 1748896234.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,457 | INFO     | mean y: 2520325.285714286
[2025-06-03 00:37:32] 2025-06-02 22:22:22,457 | INFO     | -- intersect: 30889051287.580452
[2025-06-03 00:37:32] 2025-06-02 22:22:22,458 | INFO     | intersect: 30889051287.580452
[2025-06-03 00:37:32] 2025-06-02 22:22:22,458 | INFO     | chi2: 1.0720481529387234
[2025-06-03 00:37:32] 2025-06-02 22:22:22,458 | INFO     | current chi2=1.0720481529387234 (change=65.28510162262296 %)
[2025-06-03 00:37:32] 2025-06-02 22:22:22,458 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,460 | INFO     | sum of deviations: -55725121654.50001
[2025-06-03 00:37:32] 2025-06-02 22:22:22,460 | INFO     | mean x: 1748896386.5
[2025-06-03 00:37:32] 2025-06-02 22:22:22,460 | INFO     | mean y: 2520123.0141509436
[2025-06-03 00:37:32] 2025-06-02 22:22:22,460 | INFO     | -- intersect: 32989211866.853436
[2025-06-03 00:37:32] 2025-06-02 22:22:22,461 | INFO     | intersect: 32989211866.853436
[2025-06-03 00:37:32] 2025-06-02 22:22:22,461 | INFO     | chi2: 1.0526720306087283
[2025-06-03 00:37:32] 2025-06-02 22:22:22,461 | INFO     | current chi2=1.0526720306087283 (change=1.8073929120516468 %)
[2025-06-03 00:37:32] 2025-06-02 22:22:22,461 | INFO     | left removable region: 20
[2025-06-03 00:37:32] 2025-06-02 22:22:22,462 | INFO     | sum of square deviations: 2160561440.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,463 | INFO     | sum of deviations: -26279301419.999996
[2025-06-03 00:37:32] 2025-06-02 22:22:22,463 | INFO     | mean x: 1748896356.0
[2025-06-03 00:37:32] 2025-06-02 22:22:22,463 | INFO     | mean y: 2521919.8691099477
[2025-06-03 00:37:32] 2025-06-02 22:22:22,464 | INFO     | -- intersect: 21274666113.86325
[2025-06-03 00:37:32] 2025-06-02 22:22:22,464 | INFO     | intersect: 21274666113.86325
[2025-06-03 00:37:32] 2025-06-02 22:22:22,464 | INFO     | chi2: 0.16169260029395954
[2025-06-03 00:37:32] 2025-06-02 22:22:22,464 | INFO     | -- intersect: 21274666113.86325
[2025-06-03 00:37:32] 2025-06-02 22:22:22,464 | INFO     | current memory leak: -12.16 B/s (using 191 data points, chi2=0.16)
[2025-06-03 00:37:32] 2025-06-02 22:22:22,465 | INFO     | ..............................
[2025-06-03 00:37:32] 2025-06-02 22:22:22,465 | INFO     | . Timing measurements:
[2025-06-03 00:37:32] 2025-06-02 22:22:22,465 | INFO     | . get job = 0 s
[2025-06-03 00:37:32] 2025-06-02 22:22:22,465 | INFO     | . initial setup = 8 s
[2025-06-03 00:37:32] 2025-06-02 22:22:22,466 | INFO     | . payload setup = 164 s
[2025-06-03 00:37:32] 2025-06-02 22:22:22,466 | INFO     | . stage-in = 0 s
[2025-06-03 00:37:32] 2025-06-02 22:22:22,466 | INFO     | . payload execution = 13659 s
[2025-06-03 00:37:32] 2025-06-02 22:22:22,466 | INFO     | . stage-out = 3 s
[2025-06-03 00:37:32] 2025-06-02 22:22:22,466 | INFO     | . log creation = 1 s
[2025-06-03 00:37:32] 2025-06-02 22:22:22,466 | INFO     | ..............................
[2025-06-03 00:37:32] 2025-06-02 22:22:23,066 | INFO     | 
[2025-06-03 00:37:32] 2025-06-02 22:22:23,066 | INFO     | job summary report
[2025-06-03 00:37:32] 2025-06-02 22:22:23,066 | INFO     | --------------------------------------------------
[2025-06-03 00:37:32] 2025-06-02 22:22:23,066 | INFO     | PanDA job id: 6677381813
[2025-06-03 00:37:32] 2025-06-02 22:22:23,067 | INFO     | task id: 45006595
[2025-06-03 00:37:32] 2025-06-02 22:22:23,067 | INFO     | errors: (none)
[2025-06-03 00:37:32] 2025-06-02 22:22:23,067 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 00:37:32] 2025-06-02 22:22:23,067 | INFO     | pilot state: finished 
[2025-06-03 00:37:32] 2025-06-02 22:22:23,067 | INFO     | transexitcode: 0
[2025-06-03 00:37:32] 2025-06-02 22:22:23,067 | INFO     | exeerrorcode: 0
[2025-06-03 00:37:32] 2025-06-02 22:22:23,067 | INFO     | exeerrordiag: 
[2025-06-03 00:37:32] 2025-06-02 22:22:23,067 | INFO     | exitcode: 0
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | exitmsg: OK
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | cpuconsumptiontime: 49887 s
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | nevents: 400
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | neventsw: 0
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | pid: 27730
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | pgrp: 27730
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | corecount: 8
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | event service: False
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | sizes: {0: 2405007, 1: 2405206, 12: 2405206, 22: 2405234, 33: 2405262, 44: 2405318, 55: 2405474, 65: 2405502, 76: 2405530, 87: 2405586, 93: 2405820, 98: 2406128, 1
[2025-06-03 00:37:32] 2025-06-02 22:22:23,068 | INFO     | --------------------------------------------------
[2025-06-03 00:37:32] 2025-06-02 22:22:23,069 | INFO     | 
[2025-06-03 00:37:32] 2025-06-02 22:22:23,069 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 00:37:32] 2025-06-02 22:22:23,543 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,543 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,544 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 00:37:32] 2025-06-02 22:22:23,545 | INFO     | job 6677381813 has completed (purged errors)
[2025-06-03 00:37:32] 2025-06-02 22:22:23,546 | INFO     | overall cleanup function is called
[2025-06-03 00:37:32] 2025-06-02 22:22:24,555 | INFO     | --- collectZombieJob: --- 10, [27730]
[2025-06-03 00:37:32] 2025-06-02 22:22:24,555 | INFO     | zombie collector waiting for pid 27730
[2025-06-03 00:37:32] 2025-06-02 22:22:24,555 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 00:37:32] 2025-06-02 22:22:24,555 | INFO     | collected zombie processes
[2025-06-03 00:37:32] 2025-06-02 22:22:24,556 | INFO     | will attempt to kill all subprocesses of pid=27730
[2025-06-03 00:37:32] 2025-06-02 22:22:24,680 | INFO     | process IDs to be killed: [27730] (in reverse order)
[2025-06-03 00:37:32] 2025-06-02 22:22:25,742 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 00:37:32] 2025-06-02 22:22:25,742 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 00:37:32] 2025-06-02 22:22:25,752 | INFO     | did not find any defunct processes belonging to 27730
[2025-06-03 00:37:32] 2025-06-02 22:22:25,755 | INFO     | did not find any defunct processes belonging to 27730
[2025-06-03 00:37:32] 2025-06-02 22:22:25,761 | INFO     | ready for new job
[2025-06-03 00:37:32] 2025-06-02 22:22:25,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 00:37:32] 2025-06-02 22:22:25,764 | INFO     | **************************************
[2025-06-03 00:37:32] 2025-06-02 22:22:25,764 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 00:37:32] 2025-06-02 22:22:25,764 | INFO     | **************************************
[2025-06-03 00:37:32] 2025-06-02 22:22:25,764 | INFO     | 
[2025-06-03 00:37:32] 2025-06-02 22:22:25,765 | INFO     | pilot is running in a VM
[2025-06-03 00:37:32] 2025-06-02 22:22:25,765 | INFO     | architecture information:
[2025-06-03 00:37:32] 2025-06-02 22:22:25,767 | INFO     | executing command: cat /etc/os-release
[2025-06-03 00:37:32] 2025-06-02 22:22:26,044 | INFO     | cat /etc/os-release:
[2025-06-03 00:37:32] NAME="CentOS Linux"
[2025-06-03 00:37:32] VERSION="7 (Core)"
[2025-06-03 00:37:32] ID="centos"
[2025-06-03 00:37:32] ID_LIKE="rhel fedora"
[2025-06-03 00:37:32] VERSION_ID="7"
[2025-06-03 00:37:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 00:37:32] ANSI_COLOR="0;31"
[2025-06-03 00:37:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 00:37:32] HOME_URL="https://www.centos.org/"
[2025-06-03 00:37:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 00:37:32] 
[2025-06-03 00:37:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 00:37:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 00:37:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 00:37:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 00:37:32] 
[2025-06-03 00:37:32] 2025-06-02 22:22:26,045 | INFO     | **************************************
[2025-06-03 00:37:32] 2025-06-02 22:22:26,548 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 00:37:32] 2025-06-02 22:22:26,803 | INFO     | sufficient remaining disk space (496680042496 B)
[2025-06-03 00:37:32] 2025-06-02 22:22:26,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 00:37:32] 2025-06-02 22:22:26,803 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 00:37:32] 2025-06-02 22:22:26,803 | INFO     | update_server=False
[2025-06-03 00:37:32] 2025-06-02 22:22:26,804 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 00:37:32] 2025-06-02 22:22:26,805 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:37:32] 2025-06-02 22:22:26,805 | INFO     | aborting loop
[2025-06-03 00:37:32] 2025-06-02 22:22:26,805 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 00:37:32] 2025-06-02 22:22:26,811 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 00:37:32] 2025-06-02 22:22:26,811 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 00:37:32] 2025-06-02 22:22:26,812 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 00:37:32] 2025-06-02 22:22:26,812 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 00:37:32] 2025-06-02 22:22:27,570 | INFO     | all data control threads have been joined
[2025-06-03 00:37:32] 2025-06-02 22:22:27,616 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:37:32] 2025-06-02 22:22:27,661 | INFO     | all payload control threads have been joined
[2025-06-03 00:37:32] 2025-06-02 22:22:27,811 | INFO     | [job] retrieve thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:27,813 | INFO     | [job] job monitor thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:27,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:27,852 | INFO     | [payload] validate_post thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:27,938 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:28,009 | INFO     | [job] validate thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:28,046 | INFO     | all job control threads have been joined
[2025-06-03 00:37:32] 2025-06-02 22:22:28,256 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:28,576 | INFO     | [data] control thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:28,577 | INFO     | [data] copytool_in thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:28,622 | INFO     | [job] queue monitor thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:28,667 | INFO     | [payload] control thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:28,812 | INFO     | [data] copytool_out thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:29,037 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:29,052 | INFO     | [job] control thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:29,157 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 00:37:32] 2025-06-02 22:22:29,299 | INFO     | [payload] failed_post thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:33,166 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 00:37:32] 2025-06-02 22:22:34,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040042469184)>', '<ExcThread(monitor, started 140039598098176)>']
[2025-06-03 00:37:32] 2025-06-02 22:22:34,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 00:37:32] 2025-06-02 22:22:34,860 | INFO     | [monitor] control thread has ended
[2025-06-03 00:37:32] 2025-06-02 22:22:39,159 | INFO     | all workflow threads have been joined
[2025-06-03 00:37:32] 2025-06-02 22:22:39,159 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 00:37:32] 2025-06-02 22:22:39,160 | INFO     | traces error code: 0
[2025-06-03 00:37:32] 2025-06-02 22:22:39,160 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 00:37:32] 2025-06-02 22:22:39,505 [wrapper] ==== pilot stdout END ====
[2025-06-03 00:37:32] 2025-06-02 22:22:39,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 00:37:32] 2025-06-02 22:22:39,659 [wrapper] pilotpid: 19131
[2025-06-03 00:37:32] 2025-06-02 22:22:39,777 [wrapper] Pilot exit status: 0
[2025-06-03 00:37:32] 2025-06-02 22:22:40,236 [wrapper] pandaids: 6677381813
[2025-06-03 00:37:32] 2025-06-02 22:22:41,193 [wrapper] cleanup supervisor_pilot  3304 19132
[2025-06-03 00:37:32] 2025-06-02 22:22:41,233 [wrapper] Test setup, not cleaning
[2025-06-03 00:37:32] 2025-06-02 22:22:41,264 [wrapper] apfmon messages muted
[2025-06-03 00:37:32] 2025-06-02 22:22:41,326 [wrapper] ==== wrapper stdout END ====
[2025-06-03 00:37:32] 2025-06-02 22:22:41,445 [wrapper] ==== wrapper stderr END ====
[2025-06-03 00:37:32]  *** Error codes and diagnostics ***
[2025-06-03 00:37:32]     "exeErrorCode": 0,
[2025-06-03 00:37:32]     "exeErrorDiag": "",
[2025-06-03 00:37:32]     "pilotErrorCode": 0,
[2025-06-03 00:37:32]     "pilotErrorDiag": "",
[2025-06-03 00:37:32]  *** Listing of results directory ***
[2025-06-03 00:37:32] total 392504
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 00:37:32] -rwx------. 1 boinc boinc     37140 Jun  2 18:02 runpilot2-wrapper.sh
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 00:37:32] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:23 run_atlas
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:23 job.xml
[2025-06-03 00:37:32] -rw-r--r--. 2 boinc boinc 214226311 Jun  2 20:23 EVNT.45006593._000108.pool.root.1
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc      6392 Jun  2 20:23 init_data.xml
[2025-06-03 00:37:32] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:23 start_atlas.sh
[2025-06-03 00:37:32] drwxrwx--x. 2 boinc boinc        68 Jun  2 20:23 shared
[2025-06-03 00:37:32] -rw-r--r--. 2 boinc boinc    508876 Jun  2 20:23 input.tar.gz
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:23 boinc_lockfile
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc      2522 Jun  2 20:23 pandaJob.out
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc    988298 Jun  2 20:27 agis_schedconf.cvmfs.json
[2025-06-03 00:37:32] drwx------. 4 boinc boinc      4096 Jun  2 20:27 pilot3
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc 180712844 Jun  3 00:19 HITS.45006595._002687.pool.root.1
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc       531 Jun  3 00:19 boinc_task_state.xml
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc      1020 Jun  3 00:20 memory_monitor_summary.json
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc   1603667 Jun  3 00:20 agis_ddmendpoints.agis.ALL.json
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc    379896 Jun  3 00:20 log.45006595._002687.job.log.tgz.1
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc        95 Jun  3 00:21 pilot_heartbeat.json
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc      7689 Jun  3 00:22 heartbeat.json
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc      4539 Jun  3 00:22 pilotlog.txt
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc   1201014 Jun  3 00:22 log.45006595._002687.job.log.1
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc       357 Jun  3 00:22 output.list
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc       620 Jun  3 00:22 runtime_log
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc   1597440 Jun  3 00:22 result.tar.gz
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc      8659 Jun  3 00:22 runtime_log.err
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc       656 Jun  3 00:22 cYYNDmonMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmSjVKDmKgvQSn.diag
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc      8192 Jun  3 00:37 boinc_mmap_file
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc        28 Jun  3 00:37 wrapper_checkpoint.txt
[2025-06-03 00:37:32] -rw-r--r--. 1 boinc boinc     20521 Jun  3 00:37 stderr.txt
[2025-06-03 00:37:32] HITS file was successfully produced:
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc 180712844 Jun  3 00:19 shared/HITS.pool.root.1
[2025-06-03 00:37:32]  *** Contents of shared directory: ***
[2025-06-03 00:37:32] total 387764
[2025-06-03 00:37:32] -rw-r--r--. 2 boinc boinc 214226311 Jun  2 20:23 ATLAS.root_0
[2025-06-03 00:37:32] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:23 start_atlas.sh
[2025-06-03 00:37:32] -rw-r--r--. 2 boinc boinc    508876 Jun  2 20:23 input.tar.gz
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc 180712844 Jun  3 00:19 HITS.pool.root.1
[2025-06-03 00:37:32] -rw-------. 1 boinc boinc   1597440 Jun  3 00:22 result.tar.gz
00:37:34 (12958): run_atlas exited; CPU time 50064.801978
00:37:34 (12958): called boinc_finish(0)

</stderr_txt>
]]>

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