Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:15:44 (9119): wrapper (7.7.26015): starting
20:15:44 (9119): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:15:44] Arguments: --nthreads 8
[2025-06-02 20:15:44] Threads: 8
[2025-06-02 20:15:44] Checking for CVMFS
[2025-06-02 20:15:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:15:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:15:44] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:15:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:15:45] 2.11.2.0 26010 30710 94044 146714 0 114 21448836 25165824 4053 130560 0 15299030 99.780 18426579 2022 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 20:15:45] CVMFS is ok
[2025-06-02 20:15:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:15:45] Checking for apptainer binary...
[2025-06-02 20:15:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:15:45] Running /usr/bin/apptainer --version
[2025-06-02 20:15:45] apptainer version 1.3.2-1.el7
[2025-06-02 20:15:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:15:46] cg-vwn216.simple-grid.lan
[2025-06-02 20:15:46] apptainer works
[2025-06-02 20:15:46] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:15:46] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:15:46] Starting ATLAS job with PandaID=6677382045
[2025-06-02 20:15:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 00:29:44]  *** The last 200 lines of the pilot log: ***
[2025-06-03 00:29:44] 2025-06-02 21:57:30,679 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 00:29:44] 2025-06-02 21:57:30,680 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 00:29:44] 2025-06-02 21:57:30,680 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 00:29:44] 2025-06-02 21:57:30,680 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 00:29:44] 2025-06-02 21:57:30,684 | INFO     | fitting pss+swap vs Time
[2025-06-03 00:29:44] 2025-06-02 21:57:30,685 | INFO     | sum of square deviations: 3081657780.0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,698 | INFO     | sum of deviations: 21964320995.999992
[2025-06-03 00:29:44] 2025-06-02 21:57:30,698 | INFO     | mean x: 1748894798.0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,698 | INFO     | mean y: 2466485.004651163
[2025-06-03 00:29:44] 2025-06-02 21:57:30,698 | INFO     | -- intersect: -12462670617.761692
[2025-06-03 00:29:44] 2025-06-02 21:57:30,699 | INFO     | intersect: -12462670617.761692
[2025-06-03 00:29:44] 2025-06-02 21:57:30,699 | INFO     | chi2: 2.6495972824523766
[2025-06-03 00:29:44] 2025-06-02 21:57:30,699 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 00:29:44] 2025-06-02 21:57:30,701 | INFO     | sum of deviations: 35602191035.99999
[2025-06-03 00:29:44] 2025-06-02 21:57:30,701 | INFO     | mean x: 1748894645.5
[2025-06-03 00:29:44] 2025-06-02 21:57:30,701 | INFO     | mean y: 2476192.019047619
[2025-06-03 00:29:44] 2025-06-02 21:57:30,701 | INFO     | -- intersect: -21680251427.761337
[2025-06-03 00:29:44] 2025-06-02 21:57:30,702 | INFO     | intersect: -21680251427.761337
[2025-06-03 00:29:44] 2025-06-02 21:57:30,702 | INFO     | chi2: 1.8774114693900015
[2025-06-03 00:29:44] 2025-06-02 21:57:30,702 | INFO     | current chi2=1.8774114693900015 (change=29.143516193059586 %)
[2025-06-03 00:29:44] 2025-06-02 21:57:30,702 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,704 | INFO     | sum of deviations: 34763787211.00001
[2025-06-03 00:29:44] 2025-06-02 21:57:30,704 | INFO     | mean x: 1748894493.0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,704 | INFO     | mean y: 2475553.487804878
[2025-06-03 00:29:44] 2025-06-02 21:57:30,704 | INFO     | -- intersect: -22756935538.837864
[2025-06-03 00:29:44] 2025-06-02 21:57:30,704 | INFO     | intersect: -22756935538.837864
[2025-06-03 00:29:44] 2025-06-02 21:57:30,705 | INFO     | chi2: 1.8786035302964008
[2025-06-03 00:29:44] 2025-06-02 21:57:30,705 | INFO     | current chi2=1.8786035302964008 (change=-0.0634949197783828 %)
[2025-06-03 00:29:44] 2025-06-02 21:57:30,705 | INFO     | right removable region: 204
[2025-06-03 00:29:44] 2025-06-02 21:57:30,713 | INFO     | sum of square deviations: 2871616632.5
[2025-06-03 00:29:44] 2025-06-02 21:57:30,714 | INFO     | sum of deviations: -20593325652.5
[2025-06-03 00:29:44] 2025-06-02 21:57:30,715 | INFO     | mean x: 1748894950.5
[2025-06-03 00:29:44] 2025-06-02 21:57:30,715 | INFO     | mean y: 2497188.261904762
[2025-06-03 00:29:44] 2025-06-02 21:57:30,715 | INFO     | -- intersect: 12544409238.79373
[2025-06-03 00:29:44] 2025-06-02 21:57:30,715 | INFO     | intersect: 12544409238.79373
[2025-06-03 00:29:44] 2025-06-02 21:57:30,715 | INFO     | chi2: 0.8482921212301445
[2025-06-03 00:29:44] 2025-06-02 21:57:30,716 | INFO     | current chi2=0.8482921212301445 (change=67.9841111383918 %)
[2025-06-03 00:29:44] 2025-06-02 21:57:30,716 | INFO     | sum of square deviations: 2671343110.0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,718 | INFO     | sum of deviations: -24870031291.0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,718 | INFO     | mean x: 1748895103.0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,718 | INFO     | mean y: 2500402.019512195
[2025-06-03 00:29:44] 2025-06-02 21:57:30,718 | INFO     | -- intersect: 16284600508.690823
[2025-06-03 00:29:44] 2025-06-02 21:57:30,718 | INFO     | intersect: 16284600508.690823
[2025-06-03 00:29:44] 2025-06-02 21:57:30,718 | INFO     | chi2: 0.8103702370649349
[2025-06-03 00:29:44] 2025-06-02 21:57:30,719 | INFO     | current chi2=0.8103702370649349 (change=4.470380334337828 %)
[2025-06-03 00:29:44] 2025-06-02 21:57:30,719 | INFO     | left removable region: 20
[2025-06-03 00:29:44] 2025-06-02 21:57:30,719 | INFO     | sum of square deviations: 1931608310.0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,720 | INFO     | sum of deviations: -9001441240.5
[2025-06-03 00:29:44] 2025-06-02 21:57:30,721 | INFO     | mean x: 1748895072.5
[2025-06-03 00:29:44] 2025-06-02 21:57:30,721 | INFO     | mean y: 2510364.7445652173
[2025-06-03 00:29:44] 2025-06-02 21:57:30,721 | INFO     | -- intersect: 8152494059.372974
[2025-06-03 00:29:44] 2025-06-02 21:57:30,721 | INFO     | intersect: 8152494059.372974
[2025-06-03 00:29:44] 2025-06-02 21:57:30,721 | INFO     | chi2: 0.013630367682511618
[2025-06-03 00:29:44] 2025-06-02 21:57:30,721 | INFO     | -- intersect: 8152494059.372974
[2025-06-03 00:29:44] 2025-06-02 21:57:30,722 | INFO     | current memory leak: -4.66 B/s (using 184 data points, chi2=0.01)
[2025-06-03 00:29:44] 2025-06-02 21:57:30,722 | INFO     | ..............................
[2025-06-03 00:29:44] 2025-06-02 21:57:30,722 | INFO     | . Timing measurements:
[2025-06-03 00:29:44] 2025-06-02 21:57:30,723 | INFO     | . get job = 0 s
[2025-06-03 00:29:44] 2025-06-02 21:57:30,723 | INFO     | . initial setup = 3 s
[2025-06-03 00:29:44] 2025-06-02 21:57:30,723 | INFO     | . payload setup = 20 s
[2025-06-03 00:29:44] 2025-06-02 21:57:30,723 | INFO     | . stage-in = 0 s
[2025-06-03 00:29:44] 2025-06-02 21:57:30,723 | INFO     | . payload execution = 13109 s
[2025-06-03 00:29:44] 2025-06-02 21:57:30,723 | INFO     | . stage-out = 4 s
[2025-06-03 00:29:44] 2025-06-02 21:57:30,723 | INFO     | . log creation = 1 s
[2025-06-03 00:29:44] 2025-06-02 21:57:30,723 | INFO     | ..............................
[2025-06-03 00:29:44] 2025-06-02 21:57:30,866 | INFO     | 
[2025-06-03 00:29:44] 2025-06-02 21:57:30,867 | INFO     | job summary report
[2025-06-03 00:29:44] 2025-06-02 21:57:30,867 | INFO     | --------------------------------------------------
[2025-06-03 00:29:44] 2025-06-02 21:57:30,867 | INFO     | PanDA job id: 6677382045
[2025-06-03 00:29:44] 2025-06-02 21:57:30,867 | INFO     | task id: 45006595
[2025-06-03 00:29:44] 2025-06-02 21:57:30,867 | INFO     | errors: (none)
[2025-06-03 00:29:44] 2025-06-02 21:57:30,867 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 00:29:44] 2025-06-02 21:57:30,868 | INFO     | pilot state: finished 
[2025-06-03 00:29:44] 2025-06-02 21:57:30,868 | INFO     | transexitcode: 0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,868 | INFO     | exeerrorcode: 0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,868 | INFO     | exeerrordiag: 
[2025-06-03 00:29:44] 2025-06-02 21:57:30,868 | INFO     | exitcode: 0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,868 | INFO     | exitmsg: OK
[2025-06-03 00:29:44] 2025-06-02 21:57:30,868 | INFO     | cpuconsumptiontime: 49471 s
[2025-06-03 00:29:44] 2025-06-02 21:57:30,869 | INFO     | nevents: 400
[2025-06-03 00:29:44] 2025-06-02 21:57:30,869 | INFO     | neventsw: 0
[2025-06-03 00:29:44] 2025-06-02 21:57:30,870 | INFO     | pid: 30513
[2025-06-03 00:29:44] 2025-06-02 21:57:30,870 | INFO     | pgrp: 30513
[2025-06-03 00:29:44] 2025-06-02 21:57:30,870 | INFO     | corecount: 8
[2025-06-03 00:29:44] 2025-06-02 21:57:30,870 | INFO     | event service: False
[2025-06-03 00:29:44] 2025-06-02 21:57:30,870 | INFO     | sizes: {0: 2404350, 1: 2405036, 2: 2405235, 13: 2405235, 23: 2405291, 25: 2405525, 34: 2405681, 13134: 2435170, 13139: 2444113, 13142: 2444169, 13234: 2444339}
[2025-06-03 00:29:44] 2025-06-02 21:57:30,870 | INFO     | --------------------------------------------------
[2025-06-03 00:29:44] 2025-06-02 21:57:30,870 | INFO     | 
[2025-06-03 00:29:44] 2025-06-02 21:57:30,870 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-03 00:29:44] 2025-06-02 21:57:31,263 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,263 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,263 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,264 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,265 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,265 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,265 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,265 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 00:29:44] 2025-06-02 21:57:31,265 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,265 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 00:29:44] 2025-06-02 21:57:31,265 | INFO     | job 6677382045 has completed (purged errors)
[2025-06-03 00:29:44] 2025-06-02 21:57:31,265 | INFO     | overall cleanup function is called
[2025-06-03 00:29:44] 2025-06-02 21:57:32,273 | INFO     | --- collectZombieJob: --- 10, [30513]
[2025-06-03 00:29:44] 2025-06-02 21:57:32,274 | INFO     | zombie collector waiting for pid 30513
[2025-06-03 00:29:44] 2025-06-02 21:57:32,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 00:29:44] 2025-06-02 21:57:32,274 | INFO     | collected zombie processes
[2025-06-03 00:29:44] 2025-06-02 21:57:32,274 | INFO     | will attempt to kill all subprocesses of pid=30513
[2025-06-03 00:29:44] 2025-06-02 21:57:32,445 | INFO     | process IDs to be killed: [30513] (in reverse order)
[2025-06-03 00:29:44] 2025-06-02 21:57:33,276 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 00:29:44] 2025-06-02 21:57:33,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 00:29:44] 2025-06-02 21:57:33,280 | INFO     | did not find any defunct processes belonging to 30513
[2025-06-03 00:29:44] 2025-06-02 21:57:33,283 | INFO     | did not find any defunct processes belonging to 30513
[2025-06-03 00:29:44] 2025-06-02 21:57:33,284 | INFO     | ready for new job
[2025-06-03 00:29:44] 2025-06-02 21:57:33,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 00:29:44] 2025-06-02 21:57:33,286 | INFO     | **************************************
[2025-06-03 00:29:44] 2025-06-02 21:57:33,286 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 00:29:44] 2025-06-02 21:57:33,286 | INFO     | **************************************
[2025-06-03 00:29:44] 2025-06-02 21:57:33,286 | INFO     | 
[2025-06-03 00:29:44] 2025-06-02 21:57:33,287 | INFO     | pilot is running in a VM
[2025-06-03 00:29:44] 2025-06-02 21:57:33,287 | INFO     | architecture information:
[2025-06-03 00:29:44] 2025-06-02 21:57:33,298 | INFO     | executing command: cat /etc/os-release
[2025-06-03 00:29:44] 2025-06-02 21:57:33,454 | INFO     | cat /etc/os-release:
[2025-06-03 00:29:44] NAME="CentOS Linux"
[2025-06-03 00:29:44] VERSION="7 (Core)"
[2025-06-03 00:29:44] ID="centos"
[2025-06-03 00:29:44] ID_LIKE="rhel fedora"
[2025-06-03 00:29:44] VERSION_ID="7"
[2025-06-03 00:29:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 00:29:44] ANSI_COLOR="0;31"
[2025-06-03 00:29:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 00:29:44] HOME_URL="https://www.centos.org/"
[2025-06-03 00:29:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 00:29:44] 
[2025-06-03 00:29:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 00:29:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 00:29:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 00:29:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 00:29:44] 
[2025-06-03 00:29:44] 2025-06-02 21:57:33,454 | INFO     | **************************************
[2025-06-03 00:29:44] 2025-06-02 21:57:33,958 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-03 00:29:44] 2025-06-02 21:57:34,117 | INFO     | sufficient remaining disk space (496705208320 B)
[2025-06-03 00:29:44] 2025-06-02 21:57:34,118 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 00:29:44] 2025-06-02 21:57:34,118 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 00:29:44] 2025-06-02 21:57:34,118 | INFO     | update_server=False
[2025-06-03 00:29:44] 2025-06-02 21:57:34,118 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 00:29:44] 2025-06-02 21:57:34,120 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 00:29:44] 2025-06-02 21:57:34,517 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 00:29:44] 2025-06-02 21:57:34,517 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 00:29:44] 2025-06-02 21:57:34,517 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 00:29:44] 2025-06-02 21:57:34,602 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 00:29:44] 2025-06-02 21:57:34,603 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 00:29:44] 2025-06-02 21:57:34,603 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:29:44] 2025-06-02 21:57:34,603 | INFO     | will abort loop
[2025-06-03 00:29:44] 2025-06-02 21:57:35,124 | INFO     | [job] retrieve thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:35,148 | INFO     | all job control threads have been joined
[2025-06-03 00:29:44] 2025-06-02 21:57:35,218 | INFO     | all data control threads have been joined
[2025-06-03 00:29:44] 2025-06-02 21:57:35,236 | INFO     | [payload] failed_post thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:35,402 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:35,596 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:35,596 | INFO     | all payload control threads have been joined
[2025-06-03 00:29:44] 2025-06-02 21:57:35,609 | INFO     | [job] job monitor thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:35,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 00:29:44] 2025-06-02 21:57:35,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 00:29:44] 2025-06-02 21:57:35,950 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,011 | INFO     | [data] copytool_in thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,127 | INFO     | [data] copytool_out thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,155 | INFO     | [job] control thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,224 | INFO     | [data] control thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,259 | INFO     | [job] validate thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,390 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,602 | INFO     | [payload] control thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,694 | INFO     | [payload] validate_post thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:36,887 | INFO     | [job] queue monitor thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:39,653 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 00:29:44] 2025-06-02 21:57:41,558 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139971760691008)>', '<ExcThread(monitor, started 139971465815808)>']
[2025-06-03 00:29:44] 2025-06-02 21:57:41,558 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 00:29:44] 2025-06-02 21:57:41,559 | INFO     | [monitor] control thread has ended
[2025-06-03 00:29:44] 2025-06-02 21:57:46,584 | INFO     | all workflow threads have been joined
[2025-06-03 00:29:44] 2025-06-02 21:57:46,584 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 00:29:44] 2025-06-02 21:57:46,584 | INFO     | traces error code: 0
[2025-06-03 00:29:44] 2025-06-02 21:57:46,585 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 00:29:44] 2025-06-02 21:57:46,912 [wrapper] ==== pilot stdout END ====
[2025-06-03 00:29:44] 2025-06-02 21:57:46,998 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 00:29:44] 2025-06-02 21:57:47,045 [wrapper] pilotpid: 14160
[2025-06-03 00:29:44] 2025-06-02 21:57:47,140 [wrapper] Pilot exit status: 0
[2025-06-03 00:29:44] 2025-06-02 21:57:47,605 [wrapper] pandaids: 6677382045
[2025-06-03 00:29:44] 2025-06-02 21:57:48,259 [wrapper] cleanup supervisor_pilot 24416 14161
[2025-06-03 00:29:44] 2025-06-02 21:57:48,317 [wrapper] Test setup, not cleaning
[2025-06-03 00:29:44] 2025-06-02 21:57:48,418 [wrapper] apfmon messages muted
[2025-06-03 00:29:44] 2025-06-02 21:57:48,532 [wrapper] ==== wrapper stdout END ====
[2025-06-03 00:29:44] 2025-06-02 21:57:48,622 [wrapper] ==== wrapper stderr END ====
[2025-06-03 00:29:44]  *** Error codes and diagnostics ***
[2025-06-03 00:29:44]     "exeErrorCode": 0,
[2025-06-03 00:29:44]     "exeErrorDiag": "",
[2025-06-03 00:29:44]     "pilotErrorCode": 0,
[2025-06-03 00:29:44]     "pilotErrorDiag": "",
[2025-06-03 00:29:44]  *** Listing of results directory ***
[2025-06-03 00:29:44] total 391292
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 00:29:44] -rwx------. 1 boinc boinc     37140 Jun  2 18:02 runpilot2-wrapper.sh
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 00:29:44] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:15 run_atlas
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:15 job.xml
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc      6392 Jun  2 20:15 init_data.xml
[2025-06-03 00:29:44] -rw-r--r--. 2 boinc boinc 213558209 Jun  2 20:15 EVNT.45006593._000112.pool.root.1
[2025-06-03 00:29:44] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:15 start_atlas.sh
[2025-06-03 00:29:44] drwxrwx--x. 2 boinc boinc        68 Jun  2 20:15 shared
[2025-06-03 00:29:44] -rw-r--r--. 2 boinc boinc    508869 Jun  2 20:15 input.tar.gz
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:15 boinc_lockfile
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc      2522 Jun  2 20:15 pandaJob.out
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc    988298 Jun  2 20:16 agis_schedconf.cvmfs.json
[2025-06-03 00:29:44] drwx------. 4 boinc boinc      4096 Jun  2 20:16 pilot3
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc 180225675 Jun  2 23:54 HITS.45006595._002795.pool.root.1
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc       530 Jun  2 23:54 boinc_task_state.xml
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc      1019 Jun  2 23:55 memory_monitor_summary.json
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc   1603667 Jun  2 23:55 agis_ddmendpoints.agis.ALL.json
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc    384576 Jun  2 23:55 log.45006595._002795.job.log.tgz.1
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc        95 Jun  2 23:57 pilot_heartbeat.json
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc      7690 Jun  2 23:57 heartbeat.json
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc      4603 Jun  2 23:57 pilotlog.txt
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc   1152720 Jun  2 23:57 log.45006595._002795.job.log.1
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc       357 Jun  2 23:57 output.list
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc       620 Jun  2 23:57 runtime_log
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc   1556480 Jun  2 23:57 result.tar.gz
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc      8673 Jun  2 23:57 runtime_log.err
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc       657 Jun  2 23:57 MbdKDmpnMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmaFfKDmTPn6Wn.diag
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc      8192 Jun  3 00:29 boinc_mmap_file
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc        28 Jun  3 00:29 wrapper_checkpoint.txt
[2025-06-03 00:29:44] -rw-r--r--. 1 boinc boinc     20496 Jun  3 00:29 stderr.txt
[2025-06-03 00:29:44] HITS file was successfully produced:
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc 180225675 Jun  2 23:54 shared/HITS.pool.root.1
[2025-06-03 00:29:44]  *** Contents of shared directory: ***
[2025-06-03 00:29:44] total 386596
[2025-06-03 00:29:44] -rw-r--r--. 2 boinc boinc 213558209 Jun  2 20:15 ATLAS.root_0
[2025-06-03 00:29:44] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:15 start_atlas.sh
[2025-06-03 00:29:44] -rw-r--r--. 2 boinc boinc    508869 Jun  2 20:15 input.tar.gz
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc 180225675 Jun  2 23:54 HITS.pool.root.1
[2025-06-03 00:29:44] -rw-------. 1 boinc boinc   1556480 Jun  2 23:57 result.tar.gz
00:29:46 (9119): run_atlas exited; CPU time 49640.795200
00:29:46 (9119): called boinc_finish(0)

</stderr_txt>
]]>

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