Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:29:50 (23388): wrapper (7.7.26015): starting
00:29:50 (23388): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 00:29:50] Arguments: --nthreads 8
[2025-06-03 00:29:50] Threads: 8
[2025-06-03 00:29:50] Checking for CVMFS
[2025-06-03 00:29:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 00:29:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 00:29:51] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 00:29:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 00:29:52] 2.11.2.0 26010 30964 94672 146718 2 210 21527863 25165825 4638 130560 0 15454665 99.782 18458965 2023 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 00:29:52] CVMFS is ok
[2025-06-03 00:29:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 00:29:52] Checking for apptainer binary...
[2025-06-03 00:29:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 00:29:52] Running /usr/bin/apptainer --version
[2025-06-03 00:29:52] apptainer version 1.3.2-1.el7
[2025-06-03 00:29:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 00:32:26] cg-vwn216.simple-grid.lan
[2025-06-03 00:32:26] apptainer works
[2025-06-03 00:32:26] Set ATHENA_PROC_NUMBER=8
[2025-06-03 00:32:26] Set ATHENA_CORE_NUMBER=8
[2025-06-03 00:32:26] Starting ATLAS job with PandaID=6677381985
[2025-06-03 00:32:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 04:18:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 04:18:36] 2025-06-03 02:15:30,359 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 04:18:36] 2025-06-03 02:15:30,359 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 04:18:36] 2025-06-03 02:15:30,364 | INFO     | fitting pss+swap vs Time
[2025-06-03 04:18:36] 2025-06-03 02:15:30,365 | INFO     | sum of square deviations: 3168461268.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,367 | INFO     | sum of deviations: 31323234223.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,367 | INFO     | mean x: 1748910207.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,367 | INFO     | mean y: 2445565.4331797236
[2025-06-03 04:18:36] 2025-06-03 02:15:30,367 | INFO     | -- intersect: -17287184767.790264
[2025-06-03 04:18:36] 2025-06-03 02:15:30,367 | INFO     | intersect: -17287184767.790264
[2025-06-03 04:18:36] 2025-06-03 02:15:30,367 | INFO     | chi2: 2.3543262680053685
[2025-06-03 04:18:36] 2025-06-03 02:15:30,368 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,369 | INFO     | sum of deviations: 44550025140.99999
[2025-06-03 04:18:36] 2025-06-03 02:15:30,370 | INFO     | mean x: 1748910054.5
[2025-06-03 04:18:36] 2025-06-03 02:15:30,370 | INFO     | mean y: 2454799.9056603773
[2025-06-03 04:18:36] 2025-06-03 02:15:30,370 | INFO     | -- intersect: -26369303354.847885
[2025-06-03 04:18:36] 2025-06-03 02:15:30,370 | INFO     | intersect: -26369303354.847885
[2025-06-03 04:18:36] 2025-06-03 02:15:30,370 | INFO     | chi2: 1.5774691626092985
[2025-06-03 04:18:36] 2025-06-03 02:15:30,370 | INFO     | current chi2=1.5774691626092985 (change=32.9970028348806 %)
[2025-06-03 04:18:36] 2025-06-03 02:15:30,371 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,372 | INFO     | sum of deviations: 43225205059.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,372 | INFO     | mean x: 1748909902.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,373 | INFO     | mean y: 2453810.0096618356
[2025-06-03 04:18:36] 2025-06-03 02:15:30,373 | INFO     | -- intersect: -27484408954.69344
[2025-06-03 04:18:36] 2025-06-03 02:15:30,373 | INFO     | intersect: -27484408954.69344
[2025-06-03 04:18:36] 2025-06-03 02:15:30,373 | INFO     | chi2: 1.577969562143494
[2025-06-03 04:18:36] 2025-06-03 02:15:30,373 | INFO     | current chi2=1.577969562143494 (change=-0.03172166823012485 %)
[2025-06-03 04:18:36] 2025-06-03 02:15:30,373 | INFO     | right removable region: 206
[2025-06-03 04:18:36] 2025-06-03 02:15:30,374 | INFO     | sum of square deviations: 2954447953.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,375 | INFO     | sum of deviations: -4836973406.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,375 | INFO     | mean x: 1748910359.5
[2025-06-03 04:18:36] 2025-06-03 02:15:30,375 | INFO     | mean y: 2471097.867924528
[2025-06-03 04:18:36] 2025-06-03 02:15:30,376 | INFO     | -- intersect: 2865758261.139675
[2025-06-03 04:18:36] 2025-06-03 02:15:30,376 | INFO     | intersect: 2865758261.139675
[2025-06-03 04:18:36] 2025-06-03 02:15:30,376 | INFO     | chi2: 0.8081140667365209
[2025-06-03 04:18:36] 2025-06-03 02:15:30,376 | INFO     | current chi2=0.8081140667365209 (change=65.67535784149531 %)
[2025-06-03 04:18:36] 2025-06-03 02:15:30,380 | INFO     | sum of square deviations: 2750295288.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,381 | INFO     | sum of deviations: -5493399042.000001
[2025-06-03 04:18:36] 2025-06-03 02:15:30,382 | INFO     | mean x: 1748910512.0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,382 | INFO     | mean y: 2471601.2270531403
[2025-06-03 04:18:36] 2025-06-03 02:15:30,382 | INFO     | -- intersect: 3495719534.670239
[2025-06-03 04:18:36] 2025-06-03 02:15:30,382 | INFO     | intersect: 3495719534.670239
[2025-06-03 04:18:36] 2025-06-03 02:15:30,382 | INFO     | chi2: 0.7992576566040163
[2025-06-03 04:18:36] 2025-06-03 02:15:30,383 | INFO     | current chi2=0.7992576566040163 (change=1.095935647831281 %)
[2025-06-03 04:18:36] 2025-06-03 02:15:30,383 | INFO     | left removable region: 20
[2025-06-03 04:18:36] 2025-06-03 02:15:30,383 | INFO     | sum of square deviations: 1995283922.5
[2025-06-03 04:18:36] 2025-06-03 02:15:30,384 | INFO     | sum of deviations: 4503772373.999999
[2025-06-03 04:18:36] 2025-06-03 02:15:30,384 | INFO     | mean x: 1748910481.5
[2025-06-03 04:18:36] 2025-06-03 02:15:30,384 | INFO     | mean y: 2484152.2688172045
[2025-06-03 04:18:36] 2025-06-03 02:15:30,385 | INFO     | -- intersect: -3945171929.3326397
[2025-06-03 04:18:36] 2025-06-03 02:15:30,385 | INFO     | intersect: -3945171929.3326397
[2025-06-03 04:18:36] 2025-06-03 02:15:30,385 | INFO     | chi2: 0.0003794418366039076
[2025-06-03 04:18:36] 2025-06-03 02:15:30,385 | INFO     | -- intersect: -3945171929.3326397
[2025-06-03 04:18:36] 2025-06-03 02:15:30,385 | INFO     | current memory leak: 2.26 B/s (using 186 data points, chi2=0.00)
[2025-06-03 04:18:36] 2025-06-03 02:15:30,386 | INFO     | ..............................
[2025-06-03 04:18:36] 2025-06-03 02:15:30,386 | INFO     | . Timing measurements:
[2025-06-03 04:18:36] 2025-06-03 02:15:30,386 | INFO     | . get job = 0 s
[2025-06-03 04:18:36] 2025-06-03 02:15:30,386 | INFO     | . initial setup = 2 s
[2025-06-03 04:18:36] 2025-06-03 02:15:30,386 | INFO     | . payload setup = 13 s
[2025-06-03 04:18:36] 2025-06-03 02:15:30,387 | INFO     | . stage-in = 0 s
[2025-06-03 04:18:36] 2025-06-03 02:15:30,387 | INFO     | . payload execution = 13227 s
[2025-06-03 04:18:36] 2025-06-03 02:15:30,387 | INFO     | . stage-out = 4 s
[2025-06-03 04:18:36] 2025-06-03 02:15:30,387 | INFO     | . log creation = 1 s
[2025-06-03 04:18:36] 2025-06-03 02:15:30,387 | INFO     | ..............................
[2025-06-03 04:18:36] 2025-06-03 02:15:30,534 | INFO     | 
[2025-06-03 04:18:36] 2025-06-03 02:15:30,534 | INFO     | job summary report
[2025-06-03 04:18:36] 2025-06-03 02:15:30,534 | INFO     | --------------------------------------------------
[2025-06-03 04:18:36] 2025-06-03 02:15:30,534 | INFO     | PanDA job id: 6677381985
[2025-06-03 04:18:36] 2025-06-03 02:15:30,534 | INFO     | task id: 45006595
[2025-06-03 04:18:36] 2025-06-03 02:15:30,534 | INFO     | errors: (none)
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | pilot state: finished 
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | transexitcode: 0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | exeerrorcode: 0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | exeerrordiag: 
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | exitcode: 0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | exitmsg: OK
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | cpuconsumptiontime: 49501 s
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | nevents: 400
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | neventsw: 0
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | pid: 5296
[2025-06-03 04:18:36] 2025-06-03 02:15:30,535 | INFO     | pgrp: 5296
[2025-06-03 04:18:36] 2025-06-03 02:15:30,536 | INFO     | corecount: 8
[2025-06-03 04:18:36] 2025-06-03 02:15:30,536 | INFO     | event service: False
[2025-06-03 04:18:36] 2025-06-03 02:15:30,536 | INFO     | sizes: {0: 2405008, 1: 2405207, 2: 2405207, 8: 2405441, 12: 2405469, 13245: 2435245, 13250: 2444272, 13342: 2444386}
[2025-06-03 04:18:36] 2025-06-03 02:15:30,536 | INFO     | --------------------------------------------------
[2025-06-03 04:18:36] 2025-06-03 02:15:30,536 | INFO     | 
[2025-06-03 04:18:36] 2025-06-03 02:15:30,536 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-06-03 04:18:36] 2025-06-03 02:15:30,570 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,570 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,571 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 04:18:36] 2025-06-03 02:15:30,572 | INFO     | job 6677381985 has completed (purged errors)
[2025-06-03 04:18:36] 2025-06-03 02:15:30,573 | INFO     | overall cleanup function is called
[2025-06-03 04:18:36] 2025-06-03 02:15:31,549 | INFO     | PID=29197 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-06-03 04:18:36] 2025-06-03 02:15:31,549 | INFO     | .. there are 9 such processes running
[2025-06-03 04:18:36] 2025-06-03 02:15:31,581 | INFO     | --- collectZombieJob: --- 10, [5296]
[2025-06-03 04:18:36] 2025-06-03 02:15:31,582 | INFO     | zombie collector waiting for pid 5296
[2025-06-03 04:18:36] 2025-06-03 02:15:31,582 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 04:18:36] 2025-06-03 02:15:31,582 | INFO     | collected zombie processes
[2025-06-03 04:18:36] 2025-06-03 02:15:31,582 | INFO     | will attempt to kill all subprocesses of pid=5296
[2025-06-03 04:18:36] 2025-06-03 02:15:31,691 | INFO     | process IDs to be killed: [5296] (in reverse order)
[2025-06-03 04:18:36] 2025-06-03 02:15:32,536 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 04:18:36] 2025-06-03 02:15:32,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 04:18:36] 2025-06-03 02:15:32,540 | INFO     | did not find any defunct processes belonging to 5296
[2025-06-03 04:18:36] 2025-06-03 02:15:32,543 | INFO     | did not find any defunct processes belonging to 5296
[2025-06-03 04:18:36] 2025-06-03 02:15:32,544 | INFO     | ready for new job
[2025-06-03 04:18:36] 2025-06-03 02:15:32,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 04:18:36] 2025-06-03 02:15:32,546 | INFO     | **************************************
[2025-06-03 04:18:36] 2025-06-03 02:15:32,546 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 04:18:36] 2025-06-03 02:15:32,546 | INFO     | **************************************
[2025-06-03 04:18:36] 2025-06-03 02:15:32,546 | INFO     | 
[2025-06-03 04:18:36] 2025-06-03 02:15:32,547 | INFO     | pilot is running in a VM
[2025-06-03 04:18:36] 2025-06-03 02:15:32,547 | INFO     | architecture information:
[2025-06-03 04:18:36] 2025-06-03 02:15:32,547 | INFO     | executing command: cat /etc/os-release
[2025-06-03 04:18:36] 2025-06-03 02:15:32,566 | INFO     | cat /etc/os-release:
[2025-06-03 04:18:36] NAME="CentOS Linux"
[2025-06-03 04:18:36] VERSION="7 (Core)"
[2025-06-03 04:18:36] ID="centos"
[2025-06-03 04:18:36] ID_LIKE="rhel fedora"
[2025-06-03 04:18:36] VERSION_ID="7"
[2025-06-03 04:18:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 04:18:36] ANSI_COLOR="0;31"
[2025-06-03 04:18:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 04:18:36] HOME_URL="https://www.centos.org/"
[2025-06-03 04:18:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 04:18:36] 
[2025-06-03 04:18:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 04:18:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 04:18:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 04:18:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 04:18:36] 
[2025-06-03 04:18:36] 2025-06-03 02:15:32,567 | INFO     | **************************************
[2025-06-03 04:18:36] 2025-06-03 02:15:33,071 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-06-03 04:18:36] 2025-06-03 02:15:33,149 | INFO     | sufficient remaining disk space (496931700736 B)
[2025-06-03 04:18:36] 2025-06-03 02:15:33,150 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 04:18:36] 2025-06-03 02:15:33,150 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 04:18:36] 2025-06-03 02:15:33,150 | INFO     | update_server=False
[2025-06-03 04:18:36] 2025-06-03 02:15:33,150 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 04:18:36] 2025-06-03 02:15:33,242 | INFO     | all job control threads have been joined
[2025-06-03 04:18:36] 2025-06-03 02:15:33,478 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 04:18:36] 2025-06-03 02:15:33,479 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 04:18:36] 2025-06-03 02:15:33,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:18:36] 2025-06-03 02:15:33,479 | INFO     | will abort loop
[2025-06-03 04:18:36] 2025-06-03 02:15:33,558 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 04:18:36] 2025-06-03 02:15:33,558 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 04:18:36] 2025-06-03 02:15:33,558 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 04:18:36] 2025-06-03 02:15:33,682 | INFO     | all payload control threads have been joined
[2025-06-03 04:18:36] 2025-06-03 02:15:34,063 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 04:18:36] 2025-06-03 02:15:34,156 | INFO     | [job] retrieve thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:34,166 | INFO     | all data control threads have been joined
[2025-06-03 04:18:36] 2025-06-03 02:15:34,249 | INFO     | [job] control thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:34,297 | INFO     | [data] copytool_in thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:34,324 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:34,485 | INFO     | [job] job monitor thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:34,689 | INFO     | [payload] control thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:34,713 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 04:18:36] 2025-06-03 02:15:34,844 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:34,893 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:35,173 | INFO     | [data] control thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:35,207 | INFO     | [payload] failed_post thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:35,376 | INFO     | [payload] validate_post thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:35,460 | INFO     | [job] validate thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:35,496 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:35,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 04:18:36] 2025-06-03 02:15:36,071 | INFO     | [data] copytool_out thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:36,554 | INFO     | [job] queue monitor thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:38,727 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 04:18:36] 2025-06-03 02:15:39,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681774233408)>', '<ExcThread(monitor, started 140681066551040)>']
[2025-06-03 04:18:36] 2025-06-03 02:15:39,592 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 04:18:36] 2025-06-03 02:15:39,593 | INFO     | [monitor] control thread has ended
[2025-06-03 04:18:36] 2025-06-03 02:15:44,227 | INFO     | all workflow threads have been joined
[2025-06-03 04:18:36] 2025-06-03 02:15:44,228 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 04:18:36] 2025-06-03 02:15:44,228 | INFO     | traces error code: 0
[2025-06-03 04:18:36] 2025-06-03 02:15:44,228 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 04:18:36] 2025-06-03 02:15:44,555 [wrapper] ==== pilot stdout END ====
[2025-06-03 04:18:36] 2025-06-03 02:15:44,676 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 04:18:36] 2025-06-03 02:15:44,758 [wrapper] pilotpid: 29197
[2025-06-03 04:18:36] 2025-06-03 02:15:44,846 [wrapper] Pilot exit status: 0
[2025-06-03 04:18:36] 2025-06-03 02:15:45,321 [wrapper] pandaids: 6677381985
[2025-06-03 04:18:36] 2025-06-03 02:15:46,389 [wrapper] cleanup supervisor_pilot 15395 29198
[2025-06-03 04:18:36] 2025-06-03 02:15:46,483 [wrapper] Test setup, not cleaning
[2025-06-03 04:18:36] 2025-06-03 02:15:46,610 [wrapper] apfmon messages muted
[2025-06-03 04:18:36] 2025-06-03 02:15:46,740 [wrapper] ==== wrapper stdout END ====
[2025-06-03 04:18:36] 2025-06-03 02:15:46,836 [wrapper] ==== wrapper stderr END ====
[2025-06-03 04:18:36]  *** Error codes and diagnostics ***
[2025-06-03 04:18:36]     "exeErrorCode": 0,
[2025-06-03 04:18:36]     "exeErrorDiag": "",
[2025-06-03 04:18:36]     "pilotErrorCode": 0,
[2025-06-03 04:18:36]     "pilotErrorDiag": "",
[2025-06-03 04:18:36]  *** Listing of results directory ***
[2025-06-03 04:18:36] total 396640
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 04:18:36] -rwx------. 1 boinc boinc     37140 Jun  2 18:02 runpilot2-wrapper.sh
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc       100 Jun  3 00:29 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 04:18:36] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 00:29 run_atlas
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc       105 Jun  3 00:29 job.xml
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc      6392 Jun  3 00:29 init_data.xml
[2025-06-03 04:18:36] -rw-r--r--. 2 boinc boinc 215432415 Jun  3 00:29 EVNT.45006593._000110.pool.root.1
[2025-06-03 04:18:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:29 start_atlas.sh
[2025-06-03 04:18:36] drwxrwx--x. 2 boinc boinc        68 Jun  3 00:29 shared
[2025-06-03 04:18:36] -rw-r--r--. 2 boinc boinc    508875 Jun  3 00:29 input.tar.gz
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc         0 Jun  3 00:29 boinc_lockfile
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc      2522 Jun  3 00:32 pandaJob.out
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc    987975 Jun  3 00:32 agis_schedconf.cvmfs.json
[2025-06-03 04:18:36] drwx------. 4 boinc boinc      4096 Jun  3 00:32 pilot3
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc 183809664 Jun  3 04:12 HITS.45006595._002735.pool.root.1
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc       531 Jun  3 04:12 boinc_task_state.xml
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc      1018 Jun  3 04:13 memory_monitor_summary.json
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc   1603667 Jun  3 04:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc    376309 Jun  3 04:13 log.45006595._002735.job.log.tgz.1
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc        95 Jun  3 04:15 pilot_heartbeat.json
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc      7682 Jun  3 04:15 heartbeat.json
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc      4603 Jun  3 04:15 pilotlog.txt
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc   1171192 Jun  3 04:15 log.45006595._002735.job.log.1
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc       357 Jun  3 04:15 output.list
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc       620 Jun  3 04:15 runtime_log
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc   1566720 Jun  3 04:15 result.tar.gz
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc      8673 Jun  3 04:15 runtime_log.err
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc       656 Jun  3 04:15 rHlKDmpnMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmCkVKDmIzKpWm.diag
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc      8192 Jun  3 04:18 boinc_mmap_file
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc        28 Jun  3 04:18 wrapper_checkpoint.txt
[2025-06-03 04:18:36] -rw-r--r--. 1 boinc boinc     20562 Jun  3 04:18 stderr.txt
[2025-06-03 04:18:36] HITS file was successfully produced:
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc 183809664 Jun  3 04:12 shared/HITS.pool.root.1
[2025-06-03 04:18:36]  *** Contents of shared directory: ***
[2025-06-03 04:18:36] total 391936
[2025-06-03 04:18:36] -rw-r--r--. 2 boinc boinc 215432415 Jun  3 00:29 ATLAS.root_0
[2025-06-03 04:18:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 00:29 start_atlas.sh
[2025-06-03 04:18:36] -rw-r--r--. 2 boinc boinc    508875 Jun  3 00:29 input.tar.gz
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc 183809664 Jun  3 04:12 HITS.pool.root.1
[2025-06-03 04:18:36] -rw-------. 1 boinc boinc   1566720 Jun  3 04:15 result.tar.gz
04:18:38 (23388): run_atlas exited; CPU time 49658.273045
04:18:38 (23388): called boinc_finish(0)

</stderr_txt>
]]>

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