Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:28:34 (18764): wrapper (7.7.26015): starting
20:28:34 (18764): wrapper: running run_atlas (--nthreads 8)
[2025-06-02 20:28:34] Arguments: --nthreads 8
[2025-06-02 20:28:34] Threads: 8
[2025-06-02 20:28:34] Checking for CVMFS
[2025-06-02 20:28:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-02 20:28:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-02 20:28:36] Running cvmfs_config stat atlas.cern.ch
[2025-06-02 20:28:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-02 20:28:37] 2.11.2.0 30898 30676 90636 146716 3 170 22889076 25165825 4583 130560 0 15257976 99.803 17856441 2306 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-02 20:28:37] CVMFS is ok
[2025-06-02 20:28:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-02 20:28:37] Checking for apptainer binary...
[2025-06-02 20:28:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-02 20:28:37] Running /usr/bin/apptainer --version
[2025-06-02 20:28:37] apptainer version 1.3.2-1.el7
[2025-06-02 20:28:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-02 20:28:41] cg-vwn285.simple-grid.lan
[2025-06-02 20:28:41] apptainer works
[2025-06-02 20:28:41] Set ATHENA_PROC_NUMBER=8
[2025-06-02 20:28:41] Set ATHENA_CORE_NUMBER=8
[2025-06-02 20:28:41] Starting ATLAS job with PandaID=6665721516
[2025-06-02 20:28:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 01:46:31]  *** The last 200 lines of the pilot log: ***
[2025-06-03 01:46:31] 2025-06-02 23:46:13,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 01:46:31] 2025-06-02 23:46:13,949 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 01:46:31] 2025-06-02 23:46:13,949 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 01:46:31] 2025-06-02 23:46:13,957 | INFO     | fitting pss+swap vs Time
[2025-06-03 01:46:31] 2025-06-02 23:46:13,958 | INFO     | sum of square deviations: 8456158550.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,961 | INFO     | sum of deviations: 91570187088.00003
[2025-06-03 01:46:31] 2025-06-02 23:46:13,961 | INFO     | mean x: 1748898725.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,961 | INFO     | mean y: 2442878.4717607973
[2025-06-03 01:46:31] 2025-06-02 23:46:13,962 | INFO     | -- intersect: -18936060048.03909
[2025-06-03 01:46:31] 2025-06-02 23:46:13,962 | INFO     | intersect: -18936060048.03909
[2025-06-03 01:46:31] 2025-06-02 23:46:13,962 | INFO     | chi2: 8.279071759970329
[2025-06-03 01:46:31] 2025-06-02 23:46:13,963 | INFO     | sum of square deviations: 8041713570.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,966 | INFO     | sum of deviations: 130556499341.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,966 | INFO     | mean x: 1748898572.5
[2025-06-03 01:46:31] 2025-06-02 23:46:13,966 | INFO     | mean y: 2457073.4864864866
[2025-06-03 01:46:31] 2025-06-02 23:46:13,966 | INFO     | -- intersect: -28390754564.872334
[2025-06-03 01:46:31] 2025-06-02 23:46:13,967 | INFO     | intersect: -28390754564.872334
[2025-06-03 01:46:31] 2025-06-02 23:46:13,967 | INFO     | chi2: 6.744922321087376
[2025-06-03 01:46:31] 2025-06-02 23:46:13,967 | INFO     | current chi2=6.744922321087376 (change=18.530452245874127 %)
[2025-06-03 01:46:31] 2025-06-02 23:46:13,967 | INFO     | right removable region: 295
[2025-06-03 01:46:31] 2025-06-02 23:46:13,968 | INFO     | sum of square deviations: 8041713570.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,971 | INFO     | sum of deviations: -15682870091.000008
[2025-06-03 01:46:31] 2025-06-02 23:46:13,972 | INFO     | mean x: 1748898877.5
[2025-06-03 01:46:31] 2025-06-02 23:46:13,972 | INFO     | mean y: 2482327.5743243243
[2025-06-03 01:46:31] 2025-06-02 23:46:13,972 | INFO     | -- intersect: 3413167582.573805
[2025-06-03 01:46:31] 2025-06-02 23:46:13,972 | INFO     | intersect: 3413167582.573805
[2025-06-03 01:46:31] 2025-06-02 23:46:13,973 | INFO     | chi2: 3.302613465630567
[2025-06-03 01:46:31] 2025-06-02 23:46:13,973 | INFO     | current chi2=3.302613465630567 (change=60.10889189777474 %)
[2025-06-03 01:46:31] 2025-06-02 23:46:13,973 | INFO     | sum of square deviations: 7641036290.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,976 | INFO     | sum of deviations: -68322781172.999985
[2025-06-03 01:46:31] 2025-06-02 23:46:13,977 | INFO     | mean x: 1748899030.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,977 | INFO     | mean y: 2502268.0378006874
[2025-06-03 01:46:31] 2025-06-02 23:46:13,977 | INFO     | -- intersect: 15640387128.85711
[2025-06-03 01:46:31] 2025-06-02 23:46:13,977 | INFO     | intersect: 15640387128.85711
[2025-06-03 01:46:31] 2025-06-02 23:46:13,977 | INFO     | chi2: 1.8613884231391578
[2025-06-03 01:46:31] 2025-06-02 23:46:13,978 | INFO     | current chi2=1.8613884231391578 (change=43.638925883693645 %)
[2025-06-03 01:46:31] 2025-06-02 23:46:13,978 | INFO     | sum of square deviations: 7253894147.5
[2025-06-03 01:46:31] 2025-06-02 23:46:13,983 | INFO     | sum of deviations: -71006730878.5
[2025-06-03 01:46:31] 2025-06-02 23:46:13,983 | INFO     | mean x: 1748899182.5
[2025-06-03 01:46:31] 2025-06-02 23:46:13,984 | INFO     | mean y: 2503305.101398601
[2025-06-03 01:46:31] 2025-06-02 23:46:13,984 | INFO     | -- intersect: 17122082259.559275
[2025-06-03 01:46:31] 2025-06-02 23:46:13,984 | INFO     | intersect: 17122082259.559275
[2025-06-03 01:46:31] 2025-06-02 23:46:13,984 | INFO     | chi2: 1.837788915034122
[2025-06-03 01:46:31] 2025-06-02 23:46:13,984 | INFO     | current chi2=1.837788915034122 (change=1.2678443580967436 %)
[2025-06-03 01:46:31] 2025-06-02 23:46:13,985 | INFO     | left removable region: 30
[2025-06-03 01:46:31] 2025-06-02 23:46:13,985 | INFO     | sum of square deviations: 5770452380.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,988 | INFO     | sum of deviations: -2612820808.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,988 | INFO     | mean x: 1748899457.0
[2025-06-03 01:46:31] 2025-06-02 23:46:13,988 | INFO     | mean y: 2506687.426415094
[2025-06-03 01:46:31] 2025-06-02 23:46:13,988 | INFO     | -- intersect: 794396229.4296196
[2025-06-03 01:46:31] 2025-06-02 23:46:13,988 | INFO     | intersect: 794396229.4296196
[2025-06-03 01:46:31] 2025-06-02 23:46:13,989 | INFO     | chi2: 0.06858206316592931
[2025-06-03 01:46:31] 2025-06-02 23:46:13,989 | INFO     | -- intersect: 794396229.4296196
[2025-06-03 01:46:31] 2025-06-02 23:46:13,990 | INFO     | current memory leak: -0.45 B/s (using 265 data points, chi2=0.07)
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | ..............................
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | . Timing measurements:
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | . get job = 0 s
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | . initial setup = 6 s
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | . payload setup = 138 s
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | . stage-in = 0 s
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | . payload execution = 18458 s
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | . stage-out = 3 s
[2025-06-03 01:46:31] 2025-06-02 23:46:13,991 | INFO     | . log creation = 1 s
[2025-06-03 01:46:31] 2025-06-02 23:46:13,992 | INFO     | ..............................
[2025-06-03 01:46:31] 2025-06-02 23:46:14,123 | INFO     | 
[2025-06-03 01:46:31] 2025-06-02 23:46:14,123 | INFO     | job summary report
[2025-06-03 01:46:31] 2025-06-02 23:46:14,123 | INFO     | --------------------------------------------------
[2025-06-03 01:46:31] 2025-06-02 23:46:14,123 | INFO     | PanDA job id: 6665721516
[2025-06-03 01:46:31] 2025-06-02 23:46:14,123 | INFO     | task id: 44871837
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | errors: (none)
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | pilot state: finished 
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | transexitcode: 0
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | exeerrorcode: 0
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | exeerrordiag: 
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | exitcode: 0
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | exitmsg: OK
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | cpuconsumptiontime: 69433 s
[2025-06-03 01:46:31] 2025-06-02 23:46:14,124 | INFO     | nevents: 400
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | neventsw: 0
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | pid: 1412
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | pgrp: 1412
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | corecount: 8
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | event service: False
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | sizes: {0: 2405063, 1: 2405262, 12: 2405262, 23: 2405290, 33: 2405318, 44: 2405374, 55: 2405530, 66: 2405558, 76: 2405586, 87: 2405642, 90: 2405876, 98: 2406184, 1
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | --------------------------------------------------
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | 
[2025-06-03 01:46:31] 2025-06-02 23:46:14,125 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-03 01:46:31] 2025-06-02 23:46:14,164 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,164 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,164 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,164 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 01:46:31] 2025-06-02 23:46:14,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 01:46:31] 2025-06-02 23:46:14,166 | INFO     | job 6665721516 has completed (purged errors)
[2025-06-03 01:46:31] 2025-06-02 23:46:14,166 | INFO     | overall cleanup function is called
[2025-06-03 01:46:31] 2025-06-02 23:46:15,175 | INFO     | --- collectZombieJob: --- 10, [1412]
[2025-06-03 01:46:31] 2025-06-02 23:46:15,175 | INFO     | zombie collector waiting for pid 1412
[2025-06-03 01:46:31] 2025-06-02 23:46:15,175 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 01:46:31] 2025-06-02 23:46:15,175 | INFO     | collected zombie processes
[2025-06-03 01:46:31] 2025-06-02 23:46:15,175 | INFO     | will attempt to kill all subprocesses of pid=1412
[2025-06-03 01:46:31] 2025-06-02 23:46:15,284 | INFO     | process IDs to be killed: [1412] (in reverse order)
[2025-06-03 01:46:31] 2025-06-02 23:46:15,694 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 01:46:31] 2025-06-02 23:46:15,695 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 01:46:31] 2025-06-02 23:46:15,699 | INFO     | did not find any defunct processes belonging to 1412
[2025-06-03 01:46:31] 2025-06-02 23:46:15,703 | INFO     | did not find any defunct processes belonging to 1412
[2025-06-03 01:46:31] 2025-06-02 23:46:15,703 | INFO     | ready for new job
[2025-06-03 01:46:31] 2025-06-02 23:46:15,703 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 01:46:31] 2025-06-02 23:46:15,705 | INFO     | **************************************
[2025-06-03 01:46:31] 2025-06-02 23:46:15,706 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 01:46:31] 2025-06-02 23:46:15,706 | INFO     | **************************************
[2025-06-03 01:46:31] 2025-06-02 23:46:15,706 | INFO     | 
[2025-06-03 01:46:31] 2025-06-02 23:46:15,707 | INFO     | pilot is running in a VM
[2025-06-03 01:46:31] 2025-06-02 23:46:15,707 | INFO     | architecture information:
[2025-06-03 01:46:31] 2025-06-02 23:46:15,707 | INFO     | executing command: cat /etc/os-release
[2025-06-03 01:46:31] 2025-06-02 23:46:15,764 | INFO     | cat /etc/os-release:
[2025-06-03 01:46:31] NAME="CentOS Linux"
[2025-06-03 01:46:31] VERSION="7 (Core)"
[2025-06-03 01:46:31] ID="centos"
[2025-06-03 01:46:31] ID_LIKE="rhel fedora"
[2025-06-03 01:46:31] VERSION_ID="7"
[2025-06-03 01:46:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 01:46:31] ANSI_COLOR="0;31"
[2025-06-03 01:46:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 01:46:31] HOME_URL="https://www.centos.org/"
[2025-06-03 01:46:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 01:46:31] 
[2025-06-03 01:46:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 01:46:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 01:46:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 01:46:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 01:46:31] 
[2025-06-03 01:46:31] 2025-06-02 23:46:15,764 | INFO     | **************************************
[2025-06-03 01:46:31] 2025-06-02 23:46:16,267 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-03 01:46:31] 2025-06-02 23:46:16,535 | INFO     | sufficient remaining disk space (496793288704 B)
[2025-06-03 01:46:31] 2025-06-02 23:46:16,535 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 01:46:31] 2025-06-02 23:46:16,535 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 01:46:31] 2025-06-02 23:46:16,535 | INFO     | update_server=False
[2025-06-03 01:46:31] 2025-06-02 23:46:16,535 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 01:46:31] 2025-06-02 23:46:16,536 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 01:46:31] 2025-06-02 23:46:16,536 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 01:46:31] 2025-06-02 23:46:16,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 01:46:31] 2025-06-02 23:46:16,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 01:46:31] 2025-06-02 23:46:16,656 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-06-03 01:46:31] 2025-06-02 23:46:16,657 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-06-03 01:46:31] 2025-06-02 23:46:16,657 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 01:46:31] 2025-06-02 23:46:16,657 | INFO     | will abort loop
[2025-06-03 01:46:31] 2025-06-02 23:46:16,744 | INFO     | all payload control threads have been joined
[2025-06-03 01:46:31] 2025-06-02 23:46:16,942 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 01:46:31] 2025-06-02 23:46:17,126 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 01:46:31] 2025-06-02 23:46:17,352 | INFO     | all data control threads have been joined
[2025-06-03 01:46:31] 2025-06-02 23:46:17,361 | INFO     | all job control threads have been joined
[2025-06-03 01:46:31] 2025-06-02 23:46:17,541 | INFO     | [job] retrieve thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:17,589 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:17,663 | INFO     | [job] job monitor thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:17,745 | INFO     | [payload] control thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:17,866 | INFO     | [payload] validate_post thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:18,092 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:18,186 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:18,358 | INFO     | [data] control thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:18,366 | INFO     | [job] control thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:18,707 | INFO     | [payload] failed_post thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:18,857 | INFO     | [data] copytool_in thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:18,935 | INFO     | [job] validate thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:18,949 | INFO     | [data] copytool_out thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:19,043 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:19,135 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 01:46:31] 2025-06-02 23:46:20,141 | INFO     | [job] queue monitor thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:21,135 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 01:46:31] 2025-06-02 23:46:21,587 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139828715435840)>', '<ExcThread(monitor, started 139828263892736)>']
[2025-06-03 01:46:31] 2025-06-02 23:46:22,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 01:46:31] 2025-06-02 23:46:22,571 | INFO     | [monitor] control thread has ended
[2025-06-03 01:46:31] 2025-06-02 23:46:26,613 | INFO     | all workflow threads have been joined
[2025-06-03 01:46:31] 2025-06-02 23:46:26,614 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 01:46:31] 2025-06-02 23:46:26,614 | INFO     | traces error code: 0
[2025-06-03 01:46:31] 2025-06-02 23:46:26,614 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 01:46:31] 2025-06-02 23:46:26,996 [wrapper] ==== pilot stdout END ====
[2025-06-03 01:46:31] 2025-06-02 23:46:27,027 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 01:46:31] 2025-06-02 23:46:27,039 [wrapper] pilotpid: 25154
[2025-06-03 01:46:31] 2025-06-02 23:46:27,047 [wrapper] Pilot exit status: 0
[2025-06-03 01:46:31] 2025-06-02 23:46:27,077 [wrapper] pandaids: 6665721516
[2025-06-03 01:46:31] 2025-06-02 23:46:27,118 [wrapper] cleanup supervisor_pilot 26331 25155
[2025-06-03 01:46:31] 2025-06-02 23:46:27,130 [wrapper] Test setup, not cleaning
[2025-06-03 01:46:31] 2025-06-02 23:46:27,135 [wrapper] apfmon messages muted
[2025-06-03 01:46:31] 2025-06-02 23:46:27,138 [wrapper] ==== wrapper stdout END ====
[2025-06-03 01:46:31] 2025-06-02 23:46:27,141 [wrapper] ==== wrapper stderr END ====
[2025-06-03 01:46:31]  *** Error codes and diagnostics ***
[2025-06-03 01:46:31]     "exeErrorCode": 0,
[2025-06-03 01:46:31]     "exeErrorDiag": "",
[2025-06-03 01:46:31]     "pilotErrorCode": 0,
[2025-06-03 01:46:31]     "pilotErrorDiag": "",
[2025-06-03 01:46:31]  *** Listing of results directory ***
[2025-06-03 01:46:31] total 417020
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc    495897 May 25 10:07 pilot3.tar.gz
[2025-06-03 01:46:31] -rwx------. 1 boinc boinc     37140 May 25 10:19 runpilot2-wrapper.sh
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc      5111 May 25 10:19 queuedata.json
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc       100 Jun  2 20:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 01:46:31] -rwxr-xr-x. 1 boinc boinc      7986 Jun  2 20:28 run_atlas
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc       105 Jun  2 20:28 job.xml
[2025-06-03 01:46:31] -rw-r--r--. 2 boinc boinc 223787064 Jun  2 20:28 EVNT.44871834._001260.pool.root.1
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc      6392 Jun  2 20:28 init_data.xml
[2025-06-03 01:46:31] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:28 start_atlas.sh
[2025-06-03 01:46:31] drwxrwx--x. 2 boinc boinc        68 Jun  2 20:28 shared
[2025-06-03 01:46:31] -rw-r--r--. 2 boinc boinc    508878 Jun  2 20:28 input.tar.gz
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc         0 Jun  2 20:28 boinc_lockfile
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc      2558 Jun  2 20:28 pandaJob.out
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc    988298 Jun  2 20:31 agis_schedconf.cvmfs.json
[2025-06-03 01:46:31] drwx------. 4 boinc boinc      4096 Jun  2 20:31 pilot3
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc 195403560 Jun  3 01:43 HITS.44871837._031599.pool.root.1
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc       531 Jun  3 01:44 boinc_task_state.xml
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc      1029 Jun  3 01:44 memory_monitor_summary.json
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc   1603667 Jun  3 01:44 agis_ddmendpoints.agis.ALL.json
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc    413462 Jun  3 01:44 log.44871837._031599.job.log.tgz.1
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc        95 Jun  3 01:46 pilot_heartbeat.json
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc      7686 Jun  3 01:46 heartbeat.json
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc      4726 Jun  3 01:46 pilotlog.txt
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc   1595273 Jun  3 01:46 log.44871837._031599.job.log.1
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc       357 Jun  3 01:46 output.list
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc       620 Jun  3 01:46 runtime_log
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc   2027520 Jun  3 01:46 result.tar.gz
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc      8673 Jun  3 01:46 runtime_log.err
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc       657 Jun  3 01:46 mkkMDmykLd7n9Rq4apOajLDm4fhM0noT9bVof3QYDmT9NKDmYRxQzm.diag
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc      8192 Jun  3 01:46 boinc_mmap_file
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc        28 Jun  3 01:46 wrapper_checkpoint.txt
[2025-06-03 01:46:31] -rw-r--r--. 1 boinc boinc     20525 Jun  3 01:46 stderr.txt
[2025-06-03 01:46:31] HITS file was successfully produced:
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc 195403560 Jun  3 01:43 shared/HITS.pool.root.1
[2025-06-03 01:46:31]  *** Contents of shared directory: ***
[2025-06-03 01:46:31] total 411864
[2025-06-03 01:46:31] -rw-r--r--. 2 boinc boinc 223787064 Jun  2 20:28 ATLAS.root_0
[2025-06-03 01:46:31] -rw-r--r--. 2 boinc boinc     15093 Jun  2 20:28 start_atlas.sh
[2025-06-03 01:46:31] -rw-r--r--. 2 boinc boinc    508878 Jun  2 20:28 input.tar.gz
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc 195403560 Jun  3 01:43 HITS.pool.root.1
[2025-06-03 01:46:31] -rw-------. 1 boinc boinc   2027520 Jun  3 01:46 result.tar.gz
01:46:33 (18764): run_atlas exited; CPU time 69697.571496
01:46:33 (18764): called boinc_finish(0)

</stderr_txt>
]]>

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