Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:46:37 (4771): wrapper (7.7.26015): starting
01:46:37 (4771): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 01:46:37] Arguments: --nthreads 8
[2025-06-03 01:46:37] Threads: 8
[2025-06-03 01:46:37] Checking for CVMFS
[2025-06-03 01:46:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 01:46:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 01:46:37] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 01:46:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 01:46:37] 2.11.2.0 30898 30994 90108 146722 1 155 23115814 25165824 4147 130560 0 15403017 99.804 17956112 2315 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 01:46:37] CVMFS is ok
[2025-06-03 01:46:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 01:46:37] Checking for apptainer binary...
[2025-06-03 01:46:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 01:46:37] Running /usr/bin/apptainer --version
[2025-06-03 01:46:38] apptainer version 1.3.2-1.el7
[2025-06-03 01:46:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 01:46:39] cg-vwn285.simple-grid.lan
[2025-06-03 01:46:39] apptainer works
[2025-06-03 01:46:39] Set ATHENA_PROC_NUMBER=8
[2025-06-03 01:46:39] Set ATHENA_CORE_NUMBER=8
[2025-06-03 01:46:39] Starting ATLAS job with PandaID=6665721501
[2025-06-03 01:46:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 06:57:36]  *** The last 200 lines of the pilot log: ***
[2025-06-03 06:57:36] 2025-06-03 04:49:16,428 | INFO     | using path: /var/lib/boinc/slots/17/PanDA_Pilot-6665721501/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 06:57:36] 2025-06-03 04:49:16,429 | INFO     | extracted standard info from prmon json
[2025-06-03 06:57:36] 2025-06-03 04:49:16,429 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 06:57:36] 2025-06-03 04:49:16,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 06:57:36] 2025-06-03 04:49:16,429 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 06:57:36] 2025-06-03 04:49:16,429 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 06:57:36] 2025-06-03 04:49:16,436 | INFO     | fitting pss+swap vs Time
[2025-06-03 06:57:36] 2025-06-03 04:49:16,445 | INFO     | sum of square deviations: 7960484140.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,448 | INFO     | sum of deviations: 36881951821.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,448 | INFO     | mean x: 1748917040.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,448 | INFO     | mean y: 2483184.6711864406
[2025-06-03 06:57:36] 2025-06-03 04:49:16,449 | INFO     | -- intersect: -8100475488.920987
[2025-06-03 06:57:36] 2025-06-03 04:49:16,449 | INFO     | intersect: -8100475488.920987
[2025-06-03 06:57:36] 2025-06-03 04:49:16,449 | INFO     | chi2: 2.2545662044676087
[2025-06-03 06:57:36] 2025-06-03 04:49:16,450 | INFO     | sum of square deviations: 7562532492.5
[2025-06-03 06:57:36] 2025-06-03 04:49:16,453 | INFO     | sum of deviations: 55723026213.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,453 | INFO     | mean x: 1748916887.5
[2025-06-03 06:57:36] 2025-06-03 04:49:16,453 | INFO     | mean y: 2490301.393103448
[2025-06-03 06:57:36] 2025-06-03 04:49:16,453 | INFO     | -- intersect: -12884058174.68551
[2025-06-03 06:57:36] 2025-06-03 04:49:16,453 | INFO     | intersect: -12884058174.68551
[2025-06-03 06:57:36] 2025-06-03 04:49:16,454 | INFO     | chi2: 1.476846396598454
[2025-06-03 06:57:36] 2025-06-03 04:49:16,454 | INFO     | current chi2=1.476846396598454 (change=34.495319158427854 %)
[2025-06-03 06:57:36] 2025-06-03 04:49:16,455 | INFO     | sum of square deviations: 7178069470.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,457 | INFO     | sum of deviations: 54608099750.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,458 | INFO     | mean x: 1748916735.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,458 | INFO     | mean y: 2489859.1192982458
[2025-06-03 06:57:36] 2025-06-03 04:49:16,458 | INFO     | -- intersect: -13302622318.81067
[2025-06-03 06:57:36] 2025-06-03 04:49:16,458 | INFO     | intersect: -13302622318.81067
[2025-06-03 06:57:36] 2025-06-03 04:49:16,459 | INFO     | chi2: 1.477117972702045
[2025-06-03 06:57:36] 2025-06-03 04:49:16,459 | INFO     | current chi2=1.477117972702045 (change=-0.01838892008109119 %)
[2025-06-03 06:57:36] 2025-06-03 04:49:16,459 | INFO     | right removable region: 284
[2025-06-03 06:57:36] 2025-06-03 04:49:16,459 | INFO     | sum of square deviations: 7562532492.5
[2025-06-03 06:57:36] 2025-06-03 04:49:16,466 | INFO     | sum of deviations: -8767288988.99999
[2025-06-03 06:57:36] 2025-06-03 04:49:16,466 | INFO     | mean x: 1748917192.5
[2025-06-03 06:57:36] 2025-06-03 04:49:16,466 | INFO     | mean y: 2500550.6827586205
[2025-06-03 06:57:36] 2025-06-03 04:49:16,466 | INFO     | -- intersect: 2030030674.97439
[2025-06-03 06:57:36] 2025-06-03 04:49:16,467 | INFO     | intersect: 2030030674.97439
[2025-06-03 06:57:36] 2025-06-03 04:49:16,467 | INFO     | chi2: 0.8384174921374185
[2025-06-03 06:57:36] 2025-06-03 04:49:16,467 | INFO     | current chi2=0.8384174921374185 (change=62.81246962382274 %)
[2025-06-03 06:57:36] 2025-06-03 04:49:16,468 | INFO     | sum of square deviations: 7178069470.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,471 | INFO     | sum of deviations: -7569956528.000006
[2025-06-03 06:57:36] 2025-06-03 04:49:16,471 | INFO     | mean x: 1748917345.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,471 | INFO     | mean y: 2500055.4385964912
[2025-06-03 06:57:36] 2025-06-03 04:49:16,471 | INFO     | -- intersect: 1846899629.4531941
[2025-06-03 06:57:36] 2025-06-03 04:49:16,472 | INFO     | intersect: 1846899629.4531941
[2025-06-03 06:57:36] 2025-06-03 04:49:16,472 | INFO     | chi2: 0.8233015482271365
[2025-06-03 06:57:36] 2025-06-03 04:49:16,472 | INFO     | current chi2=0.8233015482271365 (change=1.802913709701609 %)
[2025-06-03 06:57:36] 2025-06-03 04:49:16,472 | INFO     | left removable region: 20
[2025-06-03 06:57:36] 2025-06-03 04:49:16,473 | INFO     | sum of square deviations: 5705372090.0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,492 | INFO     | sum of deviations: 12566503463.5
[2025-06-03 06:57:36] 2025-06-03 04:49:16,492 | INFO     | mean x: 1748917314.5
[2025-06-03 06:57:36] 2025-06-03 04:49:16,492 | INFO     | mean y: 2506915.5946969697
[2025-06-03 06:57:36] 2025-06-03 04:49:16,493 | INFO     | -- intersect: -3849612655.810745
[2025-06-03 06:57:36] 2025-06-03 04:49:16,493 | INFO     | intersect: -3849612655.810745
[2025-06-03 06:57:36] 2025-06-03 04:49:16,493 | INFO     | chi2: 0.0026338519499861097
[2025-06-03 06:57:36] 2025-06-03 04:49:16,493 | INFO     | -- intersect: -3849612655.810745
[2025-06-03 06:57:36] 2025-06-03 04:49:16,494 | INFO     | current memory leak: 2.20 B/s (using 264 data points, chi2=0.00)
[2025-06-03 06:57:36] 2025-06-03 04:49:16,495 | INFO     | ..............................
[2025-06-03 06:57:36] 2025-06-03 04:49:16,495 | INFO     | . Timing measurements:
[2025-06-03 06:57:36] 2025-06-03 04:49:16,495 | INFO     | . get job = 0 s
[2025-06-03 06:57:36] 2025-06-03 04:49:16,495 | INFO     | . initial setup = 2 s
[2025-06-03 06:57:36] 2025-06-03 04:49:16,495 | INFO     | . payload setup = 13 s
[2025-06-03 06:57:36] 2025-06-03 04:49:16,495 | INFO     | . stage-in = 0 s
[2025-06-03 06:57:36] 2025-06-03 04:49:16,495 | INFO     | . payload execution = 18004 s
[2025-06-03 06:57:36] 2025-06-03 04:49:16,495 | INFO     | . stage-out = 4 s
[2025-06-03 06:57:36] 2025-06-03 04:49:16,496 | INFO     | . log creation = 1 s
[2025-06-03 06:57:36] 2025-06-03 04:49:16,496 | INFO     | ..............................
[2025-06-03 06:57:36] 2025-06-03 04:49:16,705 | INFO     | 
[2025-06-03 06:57:36] 2025-06-03 04:49:16,705 | INFO     | job summary report
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | --------------------------------------------------
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | PanDA job id: 6665721501
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | task id: 44871837
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | errors: (none)
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | pilot state: finished 
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | transexitcode: 0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | exeerrorcode: 0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | exeerrordiag: 
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | exitcode: 0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,706 | INFO     | exitmsg: OK
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | cpuconsumptiontime: 68362 s
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | nevents: 400
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | neventsw: 0
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | pid: 17004
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | pgrp: 17004
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | corecount: 8
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | event service: False
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | sizes: {0: 2404355, 1: 2405212, 10: 2405418, 12: 2405446, 18021: 2436935, 18022: 2436934, 18026: 2446061, 18028: 2446117, 18117: 2446287}
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | --------------------------------------------------
[2025-06-03 06:57:36] 2025-06-03 04:49:16,707 | INFO     | 
[2025-06-03 06:57:36] 2025-06-03 04:49:16,708 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-06-03 06:57:36] 2025-06-03 04:49:17,261 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,261 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,261 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,261 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,262 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,263 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,263 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,263 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,263 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,263 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 06:57:36] 2025-06-03 04:49:17,263 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,263 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 06:57:36] 2025-06-03 04:49:17,263 | INFO     | job 6665721501 has completed (purged errors)
[2025-06-03 06:57:36] 2025-06-03 04:49:17,264 | INFO     | overall cleanup function is called
[2025-06-03 06:57:36] 2025-06-03 04:49:18,273 | INFO     | --- collectZombieJob: --- 10, [17004]
[2025-06-03 06:57:36] 2025-06-03 04:49:18,274 | INFO     | zombie collector waiting for pid 17004
[2025-06-03 06:57:36] 2025-06-03 04:49:18,274 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 06:57:36] 2025-06-03 04:49:18,274 | INFO     | collected zombie processes
[2025-06-03 06:57:36] 2025-06-03 04:49:18,274 | INFO     | will attempt to kill all subprocesses of pid=17004
[2025-06-03 06:57:36] 2025-06-03 04:49:18,401 | INFO     | process IDs to be killed: [17004] (in reverse order)
[2025-06-03 06:57:36] 2025-06-03 04:49:19,219 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 06:57:36] 2025-06-03 04:49:19,219 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 06:57:36] 2025-06-03 04:49:19,223 | INFO     | did not find any defunct processes belonging to 17004
[2025-06-03 06:57:36] 2025-06-03 04:49:19,226 | INFO     | did not find any defunct processes belonging to 17004
[2025-06-03 06:57:36] 2025-06-03 04:49:19,226 | INFO     | ready for new job
[2025-06-03 06:57:36] 2025-06-03 04:49:19,226 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 06:57:36] 2025-06-03 04:49:19,234 | INFO     | **************************************
[2025-06-03 06:57:36] 2025-06-03 04:49:19,234 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 06:57:36] 2025-06-03 04:49:19,234 | INFO     | **************************************
[2025-06-03 06:57:36] 2025-06-03 04:49:19,234 | INFO     | 
[2025-06-03 06:57:36] 2025-06-03 04:49:19,235 | INFO     | pilot is running in a VM
[2025-06-03 06:57:36] 2025-06-03 04:49:19,235 | INFO     | architecture information:
[2025-06-03 06:57:36] 2025-06-03 04:49:19,240 | INFO     | executing command: cat /etc/os-release
[2025-06-03 06:57:36] 2025-06-03 04:49:19,525 | INFO     | cat /etc/os-release:
[2025-06-03 06:57:36] NAME="CentOS Linux"
[2025-06-03 06:57:36] VERSION="7 (Core)"
[2025-06-03 06:57:36] ID="centos"
[2025-06-03 06:57:36] ID_LIKE="rhel fedora"
[2025-06-03 06:57:36] VERSION_ID="7"
[2025-06-03 06:57:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 06:57:36] ANSI_COLOR="0;31"
[2025-06-03 06:57:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 06:57:36] HOME_URL="https://www.centos.org/"
[2025-06-03 06:57:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 06:57:36] 
[2025-06-03 06:57:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 06:57:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 06:57:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 06:57:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 06:57:36] 
[2025-06-03 06:57:36] 2025-06-03 04:49:19,525 | INFO     | **************************************
[2025-06-03 06:57:36] 2025-06-03 04:49:20,028 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-06-03 06:57:36] 2025-06-03 04:49:20,134 | INFO     | sufficient remaining disk space (496739811328 B)
[2025-06-03 06:57:36] 2025-06-03 04:49:20,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 06:57:36] 2025-06-03 04:49:20,135 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 06:57:36] 2025-06-03 04:49:20,135 | INFO     | update_server=False
[2025-06-03 06:57:36] 2025-06-03 04:49:20,135 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 06:57:36] 2025-06-03 04:49:20,136 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 06:57:36] 2025-06-03 04:49:20,141 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 06:57:36] 2025-06-03 04:49:20,142 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:57:36] 2025-06-03 04:49:20,143 | INFO     | aborting loop
[2025-06-03 06:57:36] 2025-06-03 04:49:20,182 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 06:57:36] 2025-06-03 04:49:20,183 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 06:57:36] 2025-06-03 04:49:20,183 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 06:57:36] 2025-06-03 04:49:20,580 | INFO     | all payload control threads have been joined
[2025-06-03 06:57:36] 2025-06-03 04:49:20,799 | INFO     | all job control threads have been joined
[2025-06-03 06:57:36] 2025-06-03 04:49:21,027 | INFO     | all data control threads have been joined
[2025-06-03 06:57:36] 2025-06-03 04:49:21,141 | INFO     | [job] retrieve thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:21,148 | INFO     | [job] job monitor thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:21,499 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:21,586 | INFO     | [payload] control thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:21,722 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 06:57:36] 2025-06-03 04:49:21,759 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:21,805 | INFO     | [job] control thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:21,808 | INFO     | [payload] failed_post thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:22,015 | INFO     | [job] validate thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:22,033 | INFO     | [data] control thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:22,148 | INFO     | [data] copytool_out thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:22,251 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:22,382 | INFO     | [data] copytool_in thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:22,389 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:22,413 | INFO     | [payload] validate_post thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:22,728 | INFO     | [job] queue monitor thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:24,145 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 06:57:36] 2025-06-03 04:49:25,066 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140261455398720)>', '<ExcThread(monitor, started 140260738590464)>']
[2025-06-03 06:57:36] 2025-06-03 04:49:25,212 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 06:57:36] 2025-06-03 04:49:25,221 | INFO     | [monitor] control thread has ended
[2025-06-03 06:57:36] 2025-06-03 04:49:30,111 | INFO     | all workflow threads have been joined
[2025-06-03 06:57:36] 2025-06-03 04:49:30,111 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 06:57:36] 2025-06-03 04:49:30,112 | INFO     | traces error code: 0
[2025-06-03 06:57:36] 2025-06-03 04:49:30,112 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 06:57:36] 2025-06-03 04:49:30,443 [wrapper] ==== pilot stdout END ====
[2025-06-03 06:57:36] 2025-06-03 04:49:30,492 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 06:57:36] 2025-06-03 04:49:30,573 [wrapper] pilotpid: 10447
[2025-06-03 06:57:36] 2025-06-03 04:49:30,663 [wrapper] Pilot exit status: 0
[2025-06-03 06:57:36] 2025-06-03 04:49:30,999 [wrapper] pandaids: 6665721501
[2025-06-03 06:57:36] 2025-06-03 04:49:31,693 [wrapper] cleanup supervisor_pilot 13233 10448
[2025-06-03 06:57:36] 2025-06-03 04:49:31,725 [wrapper] Test setup, not cleaning
[2025-06-03 06:57:36] 2025-06-03 04:49:31,856 [wrapper] apfmon messages muted
[2025-06-03 06:57:36] 2025-06-03 04:49:32,016 [wrapper] ==== wrapper stdout END ====
[2025-06-03 06:57:36] 2025-06-03 04:49:32,115 [wrapper] ==== wrapper stderr END ====
[2025-06-03 06:57:36]  *** Error codes and diagnostics ***
[2025-06-03 06:57:36]     "exeErrorCode": 0,
[2025-06-03 06:57:36]     "exeErrorDiag": "",
[2025-06-03 06:57:36]     "pilotErrorCode": 0,
[2025-06-03 06:57:36]     "pilotErrorDiag": "",
[2025-06-03 06:57:36]  *** Listing of results directory ***
[2025-06-03 06:57:36] total 417552
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc      5111 May 25 10:03 queuedata.json
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc    495897 May 25 10:07 pilot3.tar.gz
[2025-06-03 06:57:36] -rwx------. 1 boinc boinc     37140 May 25 10:11 runpilot2-wrapper.sh
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc       100 Jun  3 01:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 06:57:36] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 01:46 run_atlas
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc       105 Jun  3 01:46 job.xml
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc      6392 Jun  3 01:46 init_data.xml
[2025-06-03 06:57:36] -rw-r--r--. 2 boinc boinc 223775059 Jun  3 01:46 EVNT.44871834._001259.pool.root.1
[2025-06-03 06:57:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:46 start_atlas.sh
[2025-06-03 06:57:36] drwxrwx--x. 2 boinc boinc        68 Jun  3 01:46 shared
[2025-06-03 06:57:36] -rw-r--r--. 2 boinc boinc    508883 Jun  3 01:46 input.tar.gz
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc         0 Jun  3 01:46 boinc_lockfile
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc      2558 Jun  3 01:46 pandaJob.out
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc    988091 Jun  3 01:46 agis_schedconf.cvmfs.json
[2025-06-03 06:57:36] drwx------. 4 boinc boinc      4096 Jun  3 01:47 pilot3
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc 195978695 Jun  3 06:46 HITS.44871837._031584.pool.root.1
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc       531 Jun  3 06:46 boinc_task_state.xml
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc      1019 Jun  3 06:47 memory_monitor_summary.json
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc   1603667 Jun  3 06:47 agis_ddmendpoints.agis.ALL.json
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc    425493 Jun  3 06:47 log.44871837._031584.job.log.tgz.1
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc      7689 Jun  3 06:49 heartbeat.json
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc        95 Jun  3 06:49 pilot_heartbeat.json
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc      4417 Jun  3 06:49 pilotlog.txt
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc   1572047 Jun  3 06:49 log.44871837._031584.job.log.1
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc       357 Jun  3 06:49 output.list
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc       620 Jun  3 06:49 runtime_log
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc   2017280 Jun  3 06:49 result.tar.gz
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc      8673 Jun  3 06:49 runtime_log.err
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc       656 Jun  3 06:49 RgWLDmHdLd7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm6lTKDmemgeRm.diag
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc      8192 Jun  3 06:57 boinc_mmap_file
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc        28 Jun  3 06:57 wrapper_checkpoint.txt
[2025-06-03 06:57:36] -rw-r--r--. 1 boinc boinc     20497 Jun  3 06:57 stderr.txt
[2025-06-03 06:57:36] HITS file was successfully produced:
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc 195978695 Jun  3 06:46 shared/HITS.pool.root.1
[2025-06-03 06:57:36]  *** Contents of shared directory: ***
[2025-06-03 06:57:36] total 412408
[2025-06-03 06:57:36] -rw-r--r--. 2 boinc boinc 223775059 Jun  3 01:46 ATLAS.root_0
[2025-06-03 06:57:36] -rw-r--r--. 2 boinc boinc     15093 Jun  3 01:46 start_atlas.sh
[2025-06-03 06:57:36] -rw-r--r--. 2 boinc boinc    508883 Jun  3 01:46 input.tar.gz
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc 195978695 Jun  3 06:46 HITS.pool.root.1
[2025-06-03 06:57:36] -rw-------. 1 boinc boinc   2017280 Jun  3 06:49 result.tar.gz
06:57:38 (4771): run_atlas exited; CPU time 68594.847531
06:57:38 (4771): called boinc_finish(0)

</stderr_txt>
]]>

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