Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:08:44 (18082): wrapper (7.7.26015): starting
04:08:44 (18082): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 04:08:44] Arguments: --nthreads 8
[2025-06-03 04:08:44] Threads: 8
[2025-06-03 04:08:44] Checking for CVMFS
[2025-06-03 04:08:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 04:08:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 04:08:45] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 05:10:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 05:10:14] 2.11.2.0 31978 31261 91132 146723 0 209 21418121 25165824 4636 130560 0 16430658 99.815 17908791 2461 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 05:10:14] CVMFS is ok
[2025-06-03 05:10:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 05:10:14] Checking for apptainer binary...
[2025-06-03 05:10:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 05:10:14] Running /usr/bin/apptainer --version
[2025-06-03 05:10:14] apptainer version 1.3.2-1.el7
[2025-06-03 05:10:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 05:41:37] cg-vwn266.simple-grid.lan
[2025-06-03 05:41:37] apptainer works
[2025-06-03 05:41:37] Set ATHENA_PROC_NUMBER=8
[2025-06-03 05:41:37] Set ATHENA_CORE_NUMBER=8
[2025-06-03 05:41:37] Starting ATLAS job with PandaID=6677381980
[2025-06-03 05:41:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 09:06:25]  *** The last 200 lines of the pilot log: ***
[2025-06-03 09:06:25] 2025-06-03 07:06:08,865 | INFO     | extracted standard info from prmon json
[2025-06-03 09:06:25] 2025-06-03 07:06:08,866 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 09:06:25] 2025-06-03 07:06:08,866 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 09:06:25] 2025-06-03 07:06:08,866 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 09:06:25] 2025-06-03 07:06:08,866 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 09:06:25] 2025-06-03 07:06:08,871 | INFO     | fitting pss+swap vs Time
[2025-06-03 09:06:25] 2025-06-03 07:06:08,871 | INFO     | sum of square deviations: 2443580700.0
[2025-06-03 09:06:25] 2025-06-03 07:06:08,873 | INFO     | sum of deviations: 3715277224.0000095
[2025-06-03 09:06:25] 2025-06-03 07:06:08,873 | INFO     | mean x: 1748928249.0
[2025-06-03 09:06:25] 2025-06-03 07:06:08,873 | INFO     | mean y: 2466825.4824120603
[2025-06-03 09:06:25] 2025-06-03 07:06:08,873 | INFO     | -- intersect: -2656644571.951656
[2025-06-03 09:06:25] 2025-06-03 07:06:08,873 | INFO     | intersect: -2656644571.951656
[2025-06-03 09:06:25] 2025-06-03 07:06:08,874 | INFO     | chi2: 2.7209759519433256
[2025-06-03 09:06:25] 2025-06-03 07:06:08,874 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 09:06:25] 2025-06-03 07:06:08,875 | INFO     | sum of deviations: 16492921939.499998
[2025-06-03 09:06:25] 2025-06-03 07:06:08,876 | INFO     | mean x: 1748928096.5
[2025-06-03 09:06:25] 2025-06-03 07:06:08,876 | INFO     | mean y: 2477447.974226804
[2025-06-03 09:06:25] 2025-06-03 07:06:08,876 | INFO     | -- intersect: -12738345597.952988
[2025-06-03 09:06:25] 2025-06-03 07:06:08,876 | INFO     | intersect: -12738345597.952988
[2025-06-03 09:06:25] 2025-06-03 07:06:08,876 | INFO     | chi2: 1.9563124481953023
[2025-06-03 09:06:25] 2025-06-03 07:06:08,876 | INFO     | current chi2=1.9563124481953023 (change=28.102545456232324 %)
[2025-06-03 09:06:25] 2025-06-03 07:06:08,877 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 09:06:25] 2025-06-03 07:06:08,878 | INFO     | sum of deviations: 15915824027.999992
[2025-06-03 09:06:25] 2025-06-03 07:06:08,878 | INFO     | mean x: 1748927944.0
[2025-06-03 09:06:25] 2025-06-03 07:06:08,878 | INFO     | mean y: 2476931.9576719576
[2025-06-03 09:06:25] 2025-06-03 07:06:08,878 | INFO     | -- intersect: -13294391368.024218
[2025-06-03 09:06:25] 2025-06-03 07:06:08,878 | INFO     | intersect: -13294391368.024218
[2025-06-03 09:06:25] 2025-06-03 07:06:08,879 | INFO     | chi2: 1.9576966233178703
[2025-06-03 09:06:25] 2025-06-03 07:06:08,879 | INFO     | current chi2=1.9576966233178703 (change=-0.07075429713924049 %)
[2025-06-03 09:06:25] 2025-06-03 07:06:08,879 | INFO     | right removable region: 188
[2025-06-03 09:06:25] 2025-06-03 07:06:08,879 | INFO     | sum of square deviations: 2263977332.5
[2025-06-03 09:06:25] 2025-06-03 07:06:08,881 | INFO     | sum of deviations: -33093532730.0
[2025-06-03 09:06:25] 2025-06-03 07:06:08,881 | INFO     | mean x: 1748928401.5
[2025-06-03 09:06:25] 2025-06-03 07:06:08,881 | INFO     | mean y: 2497805.649484536
[2025-06-03 09:06:25] 2025-06-03 07:06:08,881 | INFO     | -- intersect: 25567338259.92856
[2025-06-03 09:06:25] 2025-06-03 07:06:08,881 | INFO     | intersect: 25567338259.92856
[2025-06-03 09:06:25] 2025-06-03 07:06:08,882 | INFO     | chi2: 0.9407341623718191
[2025-06-03 09:06:25] 2025-06-03 07:06:08,882 | INFO     | current chi2=0.9407341623718191 (change=65.42659034895382 %)
[2025-06-03 09:06:25] 2025-06-03 07:06:08,882 | INFO     | sum of square deviations: 2093397390.0
[2025-06-03 09:06:25] 2025-06-03 07:06:08,884 | INFO     | sum of deviations: -30581873467.999996
[2025-06-03 09:06:25] 2025-06-03 07:06:08,884 | INFO     | mean x: 1748928554.0
[2025-06-03 09:06:25] 2025-06-03 07:06:08,884 | INFO     | mean y: 2495511.7195767197
[2025-06-03 09:06:25] 2025-06-03 07:06:08,884 | INFO     | -- intersect: 25552117384.03891
[2025-06-03 09:06:25] 2025-06-03 07:06:08,884 | INFO     | intersect: 25552117384.03891
[2025-06-03 09:06:25] 2025-06-03 07:06:08,884 | INFO     | chi2: 0.9259026365214377
[2025-06-03 09:06:25] 2025-06-03 07:06:08,885 | INFO     | current chi2=0.9259026365214377 (change=1.5765905442391412 %)
[2025-06-03 09:06:25] 2025-06-03 07:06:08,885 | INFO     | left removable region: 20
[2025-06-03 09:06:25] 2025-06-03 07:06:08,885 | INFO     | sum of square deviations: 1470248962.0
[2025-06-03 09:06:25] 2025-06-03 07:06:08,886 | INFO     | sum of deviations: -4948942810.000002
[2025-06-03 09:06:25] 2025-06-03 07:06:08,886 | INFO     | mean x: 1748928523.5
[2025-06-03 09:06:25] 2025-06-03 07:06:08,887 | INFO     | mean y: 2494336.9166666665
[2025-06-03 09:06:25] 2025-06-03 07:06:08,887 | INFO     | -- intersect: 5889488625.152896
[2025-06-03 09:06:25] 2025-06-03 07:06:08,887 | INFO     | intersect: 5889488625.152896
[2025-06-03 09:06:25] 2025-06-03 07:06:08,887 | INFO     | chi2: 0.07063040446696599
[2025-06-03 09:06:25] 2025-06-03 07:06:08,887 | INFO     | -- intersect: 5889488625.152896
[2025-06-03 09:06:25] 2025-06-03 07:06:08,887 | INFO     | current memory leak: -3.37 B/s (using 168 data points, chi2=0.07)
[2025-06-03 09:06:25] 2025-06-03 07:06:08,888 | INFO     | ..............................
[2025-06-03 09:06:25] 2025-06-03 07:06:08,888 | INFO     | . Timing measurements:
[2025-06-03 09:06:25] 2025-06-03 07:06:08,888 | INFO     | . get job = 0 s
[2025-06-03 09:06:25] 2025-06-03 07:06:08,888 | INFO     | . initial setup = 3 s
[2025-06-03 09:06:25] 2025-06-03 07:06:08,889 | INFO     | . payload setup = 16 s
[2025-06-03 09:06:25] 2025-06-03 07:06:08,889 | INFO     | . stage-in = 0 s
[2025-06-03 09:06:25] 2025-06-03 07:06:08,889 | INFO     | . payload execution = 12166 s
[2025-06-03 09:06:25] 2025-06-03 07:06:08,889 | INFO     | . stage-out = 9 s
[2025-06-03 09:06:25] 2025-06-03 07:06:08,889 | INFO     | . log creation = 0 s
[2025-06-03 09:06:25] 2025-06-03 07:06:08,889 | INFO     | ..............................
[2025-06-03 09:06:25] 2025-06-03 07:06:09,160 | INFO     | 
[2025-06-03 09:06:25] 2025-06-03 07:06:09,160 | INFO     | job summary report
[2025-06-03 09:06:25] 2025-06-03 07:06:09,160 | INFO     | --------------------------------------------------
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | PanDA job id: 6677381980
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | task id: 45006595
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | errors: (none)
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | pilot state: finished 
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | transexitcode: 0
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | exeerrorcode: 0
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | exeerrordiag: 
[2025-06-03 09:06:25] 2025-06-03 07:06:09,161 | INFO     | exitcode: 0
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | exitmsg: OK
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | cpuconsumptiontime: 46130 s
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | nevents: 400
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | neventsw: 0
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | pid: 17784
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | pgrp: 17784
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | corecount: 8
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | event service: False
[2025-06-03 09:06:25] 2025-06-03 07:06:09,162 | INFO     | sizes: {0: 2404949, 1: 2405204, 2: 2405204, 10: 2405438, 12: 2405466, 12187: 2434514, 12188: 2434641, 12198: 2443638, 12201: 2443694, 12220: 2443864}
[2025-06-03 09:06:25] 2025-06-03 07:06:09,163 | INFO     | --------------------------------------------------
[2025-06-03 09:06:25] 2025-06-03 07:06:09,163 | INFO     | 
[2025-06-03 09:06:25] 2025-06-03 07:06:09,163 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 09:06:25] 2025-06-03 07:06:09,332 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,333 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,333 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,333 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,333 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,333 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,334 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,334 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,334 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,334 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,334 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,334 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,334 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,334 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,335 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,335 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,335 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,335 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 09:06:25] 2025-06-03 07:06:09,335 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,335 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 09:06:25] 2025-06-03 07:06:09,335 | INFO     | job 6677381980 has completed (purged errors)
[2025-06-03 09:06:25] 2025-06-03 07:06:09,335 | INFO     | overall cleanup function is called
[2025-06-03 09:06:25] 2025-06-03 07:06:10,345 | INFO     | --- collectZombieJob: --- 10, [17784]
[2025-06-03 09:06:25] 2025-06-03 07:06:10,345 | INFO     | zombie collector waiting for pid 17784
[2025-06-03 09:06:25] 2025-06-03 07:06:10,345 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 09:06:25] 2025-06-03 07:06:10,345 | INFO     | collected zombie processes
[2025-06-03 09:06:25] 2025-06-03 07:06:10,346 | INFO     | will attempt to kill all subprocesses of pid=17784
[2025-06-03 09:06:25] 2025-06-03 07:06:10,478 | INFO     | process IDs to be killed: [17784] (in reverse order)
[2025-06-03 09:06:25] 2025-06-03 07:06:10,589 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 09:06:25] 2025-06-03 07:06:10,589 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 09:06:25] 2025-06-03 07:06:10,592 | INFO     | did not find any defunct processes belonging to 17784
[2025-06-03 09:06:25] 2025-06-03 07:06:10,596 | INFO     | did not find any defunct processes belonging to 17784
[2025-06-03 09:06:25] 2025-06-03 07:06:10,596 | INFO     | ready for new job
[2025-06-03 09:06:25] 2025-06-03 07:06:10,596 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 09:06:25] 2025-06-03 07:06:10,598 | INFO     | **************************************
[2025-06-03 09:06:25] 2025-06-03 07:06:10,599 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 09:06:25] 2025-06-03 07:06:10,599 | INFO     | **************************************
[2025-06-03 09:06:25] 2025-06-03 07:06:10,599 | INFO     | 
[2025-06-03 09:06:25] 2025-06-03 07:06:10,600 | INFO     | pilot is running in a VM
[2025-06-03 09:06:25] 2025-06-03 07:06:10,600 | INFO     | architecture information:
[2025-06-03 09:06:25] 2025-06-03 07:06:10,605 | INFO     | executing command: cat /etc/os-release
[2025-06-03 09:06:25] 2025-06-03 07:06:10,728 | INFO     | cat /etc/os-release:
[2025-06-03 09:06:25] NAME="CentOS Linux"
[2025-06-03 09:06:25] VERSION="7 (Core)"
[2025-06-03 09:06:25] ID="centos"
[2025-06-03 09:06:25] ID_LIKE="rhel fedora"
[2025-06-03 09:06:25] VERSION_ID="7"
[2025-06-03 09:06:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 09:06:25] ANSI_COLOR="0;31"
[2025-06-03 09:06:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 09:06:25] HOME_URL="https://www.centos.org/"
[2025-06-03 09:06:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 09:06:25] 
[2025-06-03 09:06:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 09:06:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 09:06:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 09:06:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 09:06:25] 
[2025-06-03 09:06:25] 2025-06-03 07:06:10,729 | INFO     | **************************************
[2025-06-03 09:06:25] 2025-06-03 07:06:11,233 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 09:06:25] 2025-06-03 07:06:11,283 | INFO     | sufficient remaining disk space (496971546624 B)
[2025-06-03 09:06:25] 2025-06-03 07:06:11,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 09:06:25] 2025-06-03 07:06:11,283 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 09:06:25] 2025-06-03 07:06:11,283 | INFO     | update_server=False
[2025-06-03 09:06:25] 2025-06-03 07:06:11,284 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 09:06:25] 2025-06-03 07:06:11,284 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 09:06:25] 2025-06-03 07:06:11,285 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 09:06:25] 2025-06-03 07:06:11,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 09:06:25] 2025-06-03 07:06:11,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 09:06:25] 2025-06-03 07:06:11,729 | INFO     | all data control threads have been joined
[2025-06-03 09:06:25] 2025-06-03 07:06:11,942 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:06:25] 2025-06-03 07:06:11,942 | INFO     | aborting loop
[2025-06-03 09:06:25] 2025-06-03 07:06:12,015 | INFO     | all job control threads have been joined
[2025-06-03 09:06:25] 2025-06-03 07:06:12,290 | INFO     | [job] retrieve thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:12,358 | INFO     | all payload control threads have been joined
[2025-06-03 09:06:25] 2025-06-03 07:06:12,506 | INFO     | [job] validate thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:12,537 | INFO     | [payload] validate_post thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:12,735 | INFO     | [data] control thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:12,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 09:06:25] 2025-06-03 07:06:12,946 | INFO     | [job] job monitor thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:12,964 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:13,018 | INFO     | [job] control thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:13,110 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:13,226 | INFO     | [payload] failed_post thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:13,279 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:13,364 | INFO     | [payload] control thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:13,366 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:13,411 | INFO     | [data] copytool_in thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:14,030 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 09:06:25] 2025-06-03 07:06:14,203 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 09:06:25] 2025-06-03 07:06:14,751 | INFO     | [data] copytool_out thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:15,036 | INFO     | [job] queue monitor thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:18,211 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 09:06:25] 2025-06-03 07:06:19,636 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139703291422528)>', '<ExcThread(monitor, started 139702728386304)>']
[2025-06-03 09:06:25] 2025-06-03 07:06:20,340 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 09:06:25] 2025-06-03 07:06:20,340 | INFO     | [monitor] control thread has ended
[2025-06-03 09:06:25] 2025-06-03 07:06:24,662 | INFO     | all workflow threads have been joined
[2025-06-03 09:06:25] 2025-06-03 07:06:24,662 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 09:06:25] 2025-06-03 07:06:24,663 | INFO     | traces error code: 0
[2025-06-03 09:06:25] 2025-06-03 07:06:24,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 09:06:25] 2025-06-03 07:06:24,896 [wrapper] ==== pilot stdout END ====
[2025-06-03 09:06:25] 2025-06-03 07:06:24,911 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 09:06:25] 2025-06-03 07:06:24,917 [wrapper] pilotpid: 8165
[2025-06-03 09:06:25] 2025-06-03 07:06:24,924 [wrapper] Pilot exit status: 0
[2025-06-03 09:06:25] 2025-06-03 07:06:24,942 [wrapper] pandaids: 6677381980
[2025-06-03 09:06:25] 2025-06-03 07:06:24,988 [wrapper] cleanup supervisor_pilot 30672 8166
[2025-06-03 09:06:25] 2025-06-03 07:06:25,008 [wrapper] Test setup, not cleaning
[2025-06-03 09:06:25] 2025-06-03 07:06:25,023 [wrapper] apfmon messages muted
[2025-06-03 09:06:25] 2025-06-03 07:06:25,028 [wrapper] ==== wrapper stdout END ====
[2025-06-03 09:06:25] 2025-06-03 07:06:25,031 [wrapper] ==== wrapper stderr END ====
[2025-06-03 09:06:25]  *** Error codes and diagnostics ***
[2025-06-03 09:06:25]     "exeErrorCode": 0,
[2025-06-03 09:06:25]     "exeErrorDiag": "",
[2025-06-03 09:06:25]     "pilotErrorCode": 0,
[2025-06-03 09:06:25]     "pilotErrorDiag": "",
[2025-06-03 09:06:25]  *** Listing of results directory ***
[2025-06-03 09:06:25] total 385044
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc    495897 Jun  2 17:59 pilot3.tar.gz
[2025-06-03 09:06:25] -rwx------. 1 boinc boinc     37140 Jun  2 18:02 runpilot2-wrapper.sh
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc      5111 Jun  2 18:02 queuedata.json
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc       100 Jun  3 04:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 09:06:25] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 04:08 run_atlas
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc       105 Jun  3 04:08 job.xml
[2025-06-03 09:06:25] -rw-r--r--. 2 boinc boinc 215432415 Jun  3 04:08 EVNT.45006593._000110.pool.root.1
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc      6391 Jun  3 04:08 init_data.xml
[2025-06-03 09:06:25] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:08 start_atlas.sh
[2025-06-03 09:06:25] drwxrwx--x. 2 boinc boinc        68 Jun  3 04:08 shared
[2025-06-03 09:06:25] -rw-r--r--. 2 boinc boinc    508872 Jun  3 04:08 input.tar.gz
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc         0 Jun  3 04:08 boinc_lockfile
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc      2521 Jun  3 05:41 pandaJob.out
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc    988073 Jun  3 05:42 agis_schedconf.cvmfs.json
[2025-06-03 09:06:25] drwx------. 4 boinc boinc      4096 Jun  3 05:42 pilot3
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc 172195737 Jun  3 09:04 HITS.45006595._002730.pool.root.1
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc       531 Jun  3 09:04 boinc_task_state.xml
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc      1016 Jun  3 09:05 memory_monitor_summary.json
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc   1603667 Jun  3 09:05 agis_ddmendpoints.agis.ALL.json
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc    357505 Jun  3 09:05 log.45006595._002730.job.log.tgz.1
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc        95 Jun  3 09:05 pilot_heartbeat.json
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc      7684 Jun  3 09:06 heartbeat.json
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc      8192 Jun  3 09:06 boinc_mmap_file
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc        28 Jun  3 09:06 wrapper_checkpoint.txt
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc      4539 Jun  3 09:06 pilotlog.txt
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc   1057460 Jun  3 09:06 log.45006595._002730.job.log.1
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc       357 Jun  3 09:06 output.list
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc       620 Jun  3 09:06 runtime_log
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc   1433600 Jun  3 09:06 result.tar.gz
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc      8659 Jun  3 09:06 runtime_log.err
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc       656 Jun  3 09:06 jAeKDmpnMg7n9Rq4apOajLDm4fhM0noT9bVof3QYDm7jVKDmJKnvGo.diag
[2025-06-03 09:06:25] -rw-r--r--. 1 boinc boinc     20510 Jun  3 09:06 stderr.txt
[2025-06-03 09:06:25] HITS file was successfully produced:
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc 172195737 Jun  3 09:04 shared/HITS.pool.root.1
[2025-06-03 09:06:25]  *** Contents of shared directory: ***
[2025-06-03 09:06:25] total 380460
[2025-06-03 09:06:25] -rw-r--r--. 2 boinc boinc 215432415 Jun  3 04:08 ATLAS.root_0
[2025-06-03 09:06:25] -rw-r--r--. 2 boinc boinc     15093 Jun  3 04:08 start_atlas.sh
[2025-06-03 09:06:25] -rw-r--r--. 2 boinc boinc    508872 Jun  3 04:08 input.tar.gz
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc 172195737 Jun  3 09:04 HITS.pool.root.1
[2025-06-03 09:06:25] -rw-------. 1 boinc boinc   1433600 Jun  3 09:06 result.tar.gz
09:06:26 (18082): run_atlas exited; CPU time 46286.634533
09:06:26 (18082): called boinc_finish(0)

</stderr_txt>
]]>

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