Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:42:55 (656121): wrapper (7.7.26015): starting
02:42:55 (656121): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 02:42:55] Arguments: --nthreads 4
[2025-06-04 02:42:55] Threads: 4
[2025-06-04 02:42:55] Checking for CVMFS
[2025-06-04 02:42:55] No cvmfs_config command found, will try listing directly
[2025-06-04 02:42:55] CVMFS is ok
[2025-06-04 02:42:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 02:42:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 02:42:55] Further information can be found at the LHC@home message board.
[2025-06-04 02:42:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 02:42:55] Checking for apptainer binary...
[2025-06-04 02:42:55] which: no apptainer in ((null))
[2025-06-04 02:42:55] apptainer is not installed, using version from CVMFS
[2025-06-04 02:42:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 02:42:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-04 02:42:56] apptainer works
[2025-06-04 02:42:56] Set ATHENA_PROC_NUMBER=4
[2025-06-04 02:42:56] Set ATHENA_CORE_NUMBER=4
[2025-06-04 02:42:56] Starting ATLAS job with PandaID=6677386781
[2025-06-04 02:42:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 05:08:40]  *** The last 200 lines of the pilot log: ***
[2025-06-04 05:08:40] 2025-06-04 03:08:15,301 | INFO     | monitor loop #599: job 0:6677386781 is in state 'finished'
[2025-06-04 05:08:40] 2025-06-04 03:08:15,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:08:40] 2025-06-04 03:08:15,917 | INFO     | PID=664344 has CPU usage=14.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-06-04 05:08:40] 2025-06-04 03:08:15,917 | INFO     | .. there are 15 such processes running
[2025-06-04 05:08:40] 2025-06-04 03:08:17,804 | INFO     | monitor loop #600: job 0:6677386781 is in state 'finished'
[2025-06-04 05:08:40] 2025-06-04 03:08:17,804 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,282 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 05:08:40] 2025-06-04 03:08:19,283 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6677386781/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,284 | INFO     | extracted standard info from prmon json
[2025-06-04 05:08:40] 2025-06-04 03:08:19,284 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 05:08:40] 2025-06-04 03:08:19,284 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 05:08:40] 2025-06-04 03:08:19,285 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 05:08:40] 2025-06-04 03:08:19,285 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 05:08:40] 2025-06-04 03:08:19,287 | INFO     | fitting pss+swap vs Time
[2025-06-04 05:08:40] 2025-06-04 03:08:19,288 | INFO     | sum of square deviations: 887813855.5
[2025-06-04 05:08:40] 2025-06-04 03:08:19,288 | INFO     | sum of deviations: 862326926.9999952
[2025-06-04 05:08:40] 2025-06-04 03:08:19,289 | INFO     | mean x: 1749002128.5
[2025-06-04 05:08:40] 2025-06-04 03:08:19,289 | INFO     | mean y: 2338919.8028169014
[2025-06-04 05:08:40] 2025-06-04 03:08:19,289 | INFO     | -- intersect: -1696453705.9739676
[2025-06-04 05:08:40] 2025-06-04 03:08:19,289 | INFO     | intersect: -1696453705.9739676
[2025-06-04 05:08:40] 2025-06-04 03:08:19,289 | INFO     | chi2: 1.4646809809620778
[2025-06-04 05:08:40] 2025-06-04 03:08:19,289 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,290 | INFO     | sum of deviations: 1177403211.9999993
[2025-06-04 05:08:40] 2025-06-04 03:08:19,290 | INFO     | mean x: 1749001976.0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,290 | INFO     | mean y: 2339450.708029197
[2025-06-04 05:08:40] 2025-06-04 03:08:19,290 | INFO     | -- intersect: -2580506656.231386
[2025-06-04 05:08:40] 2025-06-04 03:08:19,290 | INFO     | intersect: -2580506656.231386
[2025-06-04 05:08:40] 2025-06-04 03:08:19,291 | INFO     | chi2: 1.4659895373851861
[2025-06-04 05:08:40] 2025-06-04 03:08:19,291 | INFO     | current chi2=1.4659895373851861 (change=-0.0893407124224973 %)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,291 | INFO     | right removable region: 136
[2025-06-04 05:08:40] 2025-06-04 03:08:19,291 | INFO     | sum of square deviations: 797291228.0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,292 | INFO     | sum of deviations: -17969174979.0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,292 | INFO     | mean x: 1749002281.0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,292 | INFO     | mean y: 2370059.0437956206
[2025-06-04 05:08:40] 2025-06-04 03:08:19,292 | INFO     | -- intersect: 39421000193.47584
[2025-06-04 05:08:40] 2025-06-04 03:08:19,292 | INFO     | intersect: 39421000193.47584
[2025-06-04 05:08:40] 2025-06-04 03:08:19,292 | INFO     | chi2: 0.020837443723669368
[2025-06-04 05:08:40] 2025-06-04 03:08:19,292 | INFO     | current chi2=0.020837443723669368 (change=98.57733909332377 %)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,293 | INFO     | sum of square deviations: 713140813.0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,293 | INFO     | sum of deviations: -15702944794.5
[2025-06-04 05:08:40] 2025-06-04 03:08:19,293 | INFO     | mean x: 1749002433.5
[2025-06-04 05:08:40] 2025-06-04 03:08:19,293 | INFO     | mean y: 2365944.734848485
[2025-06-04 05:08:40] 2025-06-04 03:08:19,293 | INFO     | -- intersect: 38514379502.28264
[2025-06-04 05:08:40] 2025-06-04 03:08:19,293 | INFO     | intersect: 38514379502.28264
[2025-06-04 05:08:40] 2025-06-04 03:08:19,294 | INFO     | chi2: 0.020413063426479566
[2025-06-04 05:08:40] 2025-06-04 03:08:19,294 | INFO     | current chi2=0.020413063426479566 (change=2.0366236032481595 %)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,294 | INFO     | left removable region: 20
[2025-06-04 05:08:40] 2025-06-04 03:08:19,294 | INFO     | sum of square deviations: 483971865.0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,295 | INFO     | sum of deviations: -10222419619.500002
[2025-06-04 05:08:40] 2025-06-04 03:08:19,295 | INFO     | mean x: 1749002555.5
[2025-06-04 05:08:40] 2025-06-04 03:08:19,295 | INFO     | mean y: 2357963.146551724
[2025-06-04 05:08:40] 2025-06-04 03:08:19,295 | INFO     | -- intersect: 36944666660.98551
[2025-06-04 05:08:40] 2025-06-04 03:08:19,295 | INFO     | intersect: 36944666660.98551
[2025-06-04 05:08:40] 2025-06-04 03:08:19,295 | INFO     | chi2: 0.014442360552995968
[2025-06-04 05:08:40] 2025-06-04 03:08:19,295 | INFO     | -- intersect: 36944666660.98551
[2025-06-04 05:08:40] 2025-06-04 03:08:19,295 | INFO     | current memory leak: -21.12 B/s (using 116 data points, chi2=0.01)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | ..............................
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | . Timing measurements:
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | . get job = 0 s
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | . initial setup = 1 s
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | . payload setup = 10 s
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | . stage-in = 0 s
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | . payload execution = 8664 s
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | . stage-out = 0 s
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | . log creation = 0 s
[2025-06-04 05:08:40] 2025-06-04 03:08:19,296 | INFO     | ..............................
[2025-06-04 05:08:40] 2025-06-04 03:08:19,524 | INFO     | 
[2025-06-04 05:08:40] 2025-06-04 03:08:19,524 | INFO     | job summary report
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | --------------------------------------------------
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | PanDA job id: 6677386781
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | task id: 45006595
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | errors: (none)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | pilot state: finished 
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | transexitcode: 0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | exeerrorcode: 0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | exeerrordiag: 
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | exitcode: 0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | exitmsg: OK
[2025-06-04 05:08:40] 2025-06-04 03:08:19,525 | INFO     | cpuconsumptiontime: 32673 s
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | nevents: 400
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | neventsw: 0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | pid: 674268
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | pgrp: 674268
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | corecount: 4
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | event service: False
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | sizes: {0: 2405018, 1: 2405217, 8: 2405423, 12: 2405451, 8678: 2433631, 8679: 2433630, 8680: 2442779, 8682: 2442835, 8690: 2443005}
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | --------------------------------------------------
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | 
[2025-06-04 05:08:40] 2025-06-04 03:08:19,526 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-04 05:08:40] 2025-06-04 03:08:19,555 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,555 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,555 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,555 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,557 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,559 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 05:08:40] 2025-06-04 03:08:19,559 | INFO     | job 6677386781 has completed (purged errors)
[2025-06-04 05:08:40] 2025-06-04 03:08:19,559 | INFO     | overall cleanup function is called
[2025-06-04 05:08:40] 2025-06-04 03:08:20,568 | INFO     | --- collectZombieJob: --- 10, [674268]
[2025-06-04 05:08:40] 2025-06-04 03:08:20,568 | INFO     | zombie collector waiting for pid 674268
[2025-06-04 05:08:40] 2025-06-04 03:08:20,568 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 05:08:40] 2025-06-04 03:08:20,568 | INFO     | collected zombie processes
[2025-06-04 05:08:40] 2025-06-04 03:08:20,568 | INFO     | will attempt to kill all subprocesses of pid=674268
[2025-06-04 05:08:40] 2025-06-04 03:08:21,301 | INFO     | process IDs to be killed: [674268] (in reverse order)
[2025-06-04 05:08:40] 2025-06-04 03:08:21,638 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 05:08:40] 2025-06-04 03:08:21,639 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 05:08:40] 2025-06-04 03:08:21,669 | INFO     | did not find any defunct processes belonging to 674268
[2025-06-04 05:08:40] 2025-06-04 03:08:21,698 | INFO     | did not find any defunct processes belonging to 674268
[2025-06-04 05:08:40] 2025-06-04 03:08:21,698 | INFO     | ready for new job
[2025-06-04 05:08:40] 2025-06-04 03:08:21,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 05:08:40] 2025-06-04 03:08:21,700 | INFO     | **************************************
[2025-06-04 05:08:40] 2025-06-04 03:08:21,700 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 05:08:40] 2025-06-04 03:08:21,700 | INFO     | **************************************
[2025-06-04 05:08:40] 2025-06-04 03:08:21,700 | INFO     | 
[2025-06-04 05:08:40] 2025-06-04 03:08:21,708 | INFO     | architecture information:
[2025-06-04 05:08:40] 2025-06-04 03:08:21,708 | INFO     | executing command: cat /etc/os-release
[2025-06-04 05:08:40] 2025-06-04 03:08:21,732 | INFO     | cat /etc/os-release:
[2025-06-04 05:08:40] NAME="CentOS Linux"
[2025-06-04 05:08:40] VERSION="7 (Core)"
[2025-06-04 05:08:40] ID="centos"
[2025-06-04 05:08:40] ID_LIKE="rhel fedora"
[2025-06-04 05:08:40] VERSION_ID="7"
[2025-06-04 05:08:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 05:08:40] ANSI_COLOR="0;31"
[2025-06-04 05:08:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 05:08:40] HOME_URL="https://www.centos.org/"
[2025-06-04 05:08:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 05:08:40] 
[2025-06-04 05:08:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 05:08:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 05:08:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 05:08:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 05:08:40] 
[2025-06-04 05:08:40] 2025-06-04 03:08:21,733 | INFO     | **************************************
[2025-06-04 05:08:40] 2025-06-04 03:08:22,236 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-04 05:08:40] 2025-06-04 03:08:22,259 | INFO     | sufficient remaining disk space (3244472401920 B)
[2025-06-04 05:08:40] 2025-06-04 03:08:22,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 05:08:40] 2025-06-04 03:08:22,259 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 05:08:40] 2025-06-04 03:08:22,259 | INFO     | update_server=False
[2025-06-04 05:08:40] 2025-06-04 03:08:22,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 05:08:40] 2025-06-04 03:08:22,260 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-04 05:08:40] 2025-06-04 03:08:22,260 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 05:08:40] 2025-06-04 03:08:22,260 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:08:40] 2025-06-04 03:08:22,261 | INFO     | aborting loop
[2025-06-04 05:08:40] 2025-06-04 03:08:22,260 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 05:08:40] 2025-06-04 03:08:22,261 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 05:08:40] 2025-06-04 03:08:22,261 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 05:08:40] 2025-06-04 03:08:22,539 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 05:08:40] 2025-06-04 03:08:23,186 | INFO     | all data control threads have been joined
[2025-06-04 05:08:40] 2025-06-04 03:08:23,265 | INFO     | [job] retrieve thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:23,265 | INFO     | [job] job monitor thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:23,582 | INFO     | all payload control threads have been joined
[2025-06-04 05:08:40] 2025-06-04 03:08:23,843 | INFO     | [job] validate thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:23,870 | INFO     | [payload] validate_post thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:23,888 | INFO     | all job control threads have been joined
[2025-06-04 05:08:40] 2025-06-04 03:08:23,892 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:24,032 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:24,083 | INFO     | [payload] failed_post thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:24,191 | INFO     | [data] control thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:24,323 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:24,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 05:08:40] 2025-06-04 03:08:24,468 | INFO     | [data] copytool_in thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:24,545 | INFO     | [data] copytool_out thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:24,587 | INFO     | [payload] control thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:24,893 | INFO     | [job] control thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:25,406 | INFO     | [job] queue monitor thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:26,266 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:32,803 | INFO     | job.realtimelogging is not enabled
[2025-06-04 05:08:40] 2025-06-04 03:08:33,808 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 05:08:40] 2025-06-04 03:08:34,859 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23210249492288)>', '<ExcThread(monitor, started 23209399285504)>']
[2025-06-04 05:08:40] 2025-06-04 03:08:35,326 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 05:08:40] 2025-06-04 03:08:35,326 | INFO     | [monitor] control thread has ended
[2025-06-04 05:08:40] 2025-06-04 03:08:39,884 | INFO     | all workflow threads have been joined
[2025-06-04 05:08:40] 2025-06-04 03:08:39,884 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 05:08:40] 2025-06-04 03:08:39,885 | INFO     | traces error code: 0
[2025-06-04 05:08:40] 2025-06-04 03:08:39,885 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 05:08:40] 2025-06-04 03:08:40,108 [wrapper] ==== pilot stdout END ====
[2025-06-04 05:08:40] 2025-06-04 03:08:40,113 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 05:08:40] 2025-06-04 03:08:40,117 [wrapper] pilotpid: 664344
[2025-06-04 05:08:40] 2025-06-04 03:08:40,121 [wrapper] Pilot exit status: 0
[2025-06-04 05:08:40] 2025-06-04 03:08:40,135 [wrapper] pandaids: 6677386781
[2025-06-04 05:08:40] 2025-06-04 03:08:40,306 [wrapper] cleanup supervisor_pilot 1176311 664347
[2025-06-04 05:08:40] 2025-06-04 03:08:40,310 [wrapper] Test setup, not cleaning
[2025-06-04 05:08:40] 2025-06-04 03:08:40,313 [wrapper] apfmon messages muted
[2025-06-04 05:08:40] 2025-06-04 03:08:40,316 [wrapper] ==== wrapper stdout END ====
[2025-06-04 05:08:40] 2025-06-04 03:08:40,319 [wrapper] ==== wrapper stderr END ====
[2025-06-04 05:08:40]  *** Error codes and diagnostics ***
[2025-06-04 05:08:40]     "exeErrorCode": 0,
[2025-06-04 05:08:40]     "exeErrorDiag": "",
[2025-06-04 05:08:40]     "pilotErrorCode": 0,
[2025-06-04 05:08:40]     "pilotErrorDiag": "",
[2025-06-04 05:08:40]  *** Listing of results directory ***
[2025-06-04 05:08:40] total 394328
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-04 05:08:40] -rwx------ 1 boinc boinc     37140 Jun  2 19:18 runpilot2-wrapper.sh
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc      5111 Jun  2 19:18 queuedata.json
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc       100 Jun  4 02:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 05:08:40] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 02:42 run_atlas
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc       105 Jun  4 02:42 job.xml
[2025-06-04 05:08:40] -rw-r--r-- 2 boinc boinc 214715679 Jun  4 02:42 EVNT.45006593._000209.pool.root.1
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc      6686 Jun  4 02:42 init_data.xml
[2025-06-04 05:08:40] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:42 start_atlas.sh
[2025-06-04 05:08:40] drwxrwx--x 2 boinc boinc      4096 Jun  4 02:42 shared
[2025-06-04 05:08:40] -rw-r--r-- 2 boinc boinc    508872 Jun  4 02:42 input.tar.gz
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc         0 Jun  4 02:42 boinc_lockfile
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc      2521 Jun  4 02:42 pandaJob.out
[2025-06-04 05:08:40] -rw------- 1 boinc boinc    986069 Jun  4 02:43 agis_schedconf.cvmfs.json
[2025-06-04 05:08:40] -rw------- 1 boinc boinc   1603667 Jun  4 02:43 agis_ddmendpoints.agis.ALL.json
[2025-06-04 05:08:40] drwx------ 4 boinc boinc      4096 Jun  4 02:43 pilot3
[2025-06-04 05:08:40] -rw------- 1 boinc boinc        95 Jun  4 05:07 pilot_heartbeat.json
[2025-06-04 05:08:40] -rw------- 1 boinc boinc 183035442 Jun  4 05:07 HITS.45006595._005223.pool.root.1
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc       528 Jun  4 05:07 boinc_task_state.xml
[2025-06-04 05:08:40] -rw------- 1 boinc boinc      1028 Jun  4 05:08 memory_monitor_summary.json
[2025-06-04 05:08:40] -rw------- 1 boinc boinc    290848 Jun  4 05:08 log.45006595._005223.job.log.tgz.1
[2025-06-04 05:08:40] -rw------- 1 boinc boinc      7703 Jun  4 05:08 heartbeat.json
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc      8192 Jun  4 05:08 boinc_mmap_file
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc        26 Jun  4 05:08 wrapper_checkpoint.txt
[2025-06-04 05:08:40] -rw------- 1 boinc boinc      4560 Jun  4 05:08 pilotlog.txt
[2025-06-04 05:08:40] -rw------- 1 boinc boinc    809247 Jun  4 05:08 log.45006595._005223.job.log.1
[2025-06-04 05:08:40] -rw------- 1 boinc boinc       357 Jun  4 05:08 output.list
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc       620 Jun  4 05:08 runtime_log
[2025-06-04 05:08:40] -rw------- 1 boinc boinc   1116160 Jun  4 05:08 result.tar.gz
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc      9040 Jun  4 05:08 runtime_log.err
[2025-06-04 05:08:40] -rw------- 1 boinc boinc       663 Jun  4 05:08 7hxMDmjyNg7n9Rq4apOajLDm4fhM0noT9bVof3QYDmqvVKDmhMe5km.diag
[2025-06-04 05:08:40] -rw-r--r-- 1 boinc boinc     20946 Jun  4 05:08 stderr.txt
[2025-06-04 05:08:40] HITS file was successfully produced:
[2025-06-04 05:08:40] -rw------- 1 boinc boinc 183035442 Jun  4 05:07 shared/HITS.pool.root.1
[2025-06-04 05:08:40]  *** Contents of shared directory: ***
[2025-06-04 05:08:40] total 390048
[2025-06-04 05:08:40] -rw-r--r-- 2 boinc boinc 214715679 Jun  4 02:42 ATLAS.root_0
[2025-06-04 05:08:40] -rw-r--r-- 2 boinc boinc     15093 Jun  4 02:42 start_atlas.sh
[2025-06-04 05:08:40] -rw-r--r-- 2 boinc boinc    508872 Jun  4 02:42 input.tar.gz
[2025-06-04 05:08:40] -rw------- 1 boinc boinc 183035442 Jun  4 05:07 HITS.pool.root.1
[2025-06-04 05:08:40] -rw------- 1 boinc boinc   1116160 Jun  4 05:08 result.tar.gz
05:08:42 (656121): run_atlas exited; CPU time 33144.646676
05:08:42 (656121): called boinc_finish(0)

</stderr_txt>
]]>

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