Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:40:47 (21403): wrapper (7.7.26015): starting
03:40:47 (21403): wrapper: running run_atlas (--nthreads 8)
[2025-06-03 03:40:47] Arguments: --nthreads 8
[2025-06-03 03:40:47] Threads: 8
[2025-06-03 03:40:47] Checking for CVMFS
[2025-06-03 03:40:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-06-03 03:40:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-06-03 03:40:47] Running cvmfs_config stat atlas.cern.ch
[2025-06-03 03:40:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-06-03 03:40:48] 2.11.2.0 14280 31120 95380 146723 2 114 14890463 25165825 4097 130560 0 16190431 99.798 16189392 1826 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-06-03 03:40:48] CVMFS is ok
[2025-06-03 03:40:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-03 03:40:48] Checking for apptainer binary...
[2025-06-03 03:40:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-06-03 03:40:48] Running /usr/bin/apptainer --version
[2025-06-03 03:40:48] apptainer version 1.3.2-1.el7
[2025-06-03 03:40:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-03 03:40:49] cg-vwn302.simple-grid.lan
[2025-06-03 03:40:49] apptainer works
[2025-06-03 03:40:49] Set ATHENA_PROC_NUMBER=8
[2025-06-03 03:40:49] Set ATHENA_CORE_NUMBER=8
[2025-06-03 03:40:49] Starting ATLAS job with PandaID=6677386737
[2025-06-03 03:40:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-03 08:00:02]  *** The last 200 lines of the pilot log: ***
[2025-06-03 08:00:02] 2025-06-03 05:15:03,714 | INFO     | .. there are 9 such processes running
[2025-06-03 08:00:02] 2025-06-03 05:15:06,187 | INFO     | monitor loop #902: job 0:6677386737 is in state 'finished'
[2025-06-03 08:00:02] 2025-06-03 05:15:06,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:00:02] 2025-06-03 05:15:08,693 | INFO     | monitor loop #903: job 0:6677386737 is in state 'finished'
[2025-06-03 08:00:02] 2025-06-03 05:15:08,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,057 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-03 08:00:02] 2025-06-03 05:15:11,057 | INFO     | using path: /var/lib/boinc/slots/8/PanDA_Pilot-6677386737/memory_monitor_summary.json (trf name=prmon)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,058 | INFO     | extracted standard info from prmon json
[2025-06-03 08:00:02] 2025-06-03 05:15:11,058 | INFO     | extracted standard memory fields from prmon json
[2025-06-03 08:00:02] 2025-06-03 05:15:11,058 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-03 08:00:02] 2025-06-03 05:15:11,059 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-03 08:00:02] 2025-06-03 05:15:11,059 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-03 08:00:02] 2025-06-03 05:15:11,063 | INFO     | fitting pss+swap vs Time
[2025-06-03 08:00:02] 2025-06-03 05:15:11,064 | INFO     | sum of square deviations: 2790348132.0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,066 | INFO     | sum of deviations: 13683502248.999996
[2025-06-03 08:00:02] 2025-06-03 05:15:11,066 | INFO     | mean x: 1748921252.5
[2025-06-03 08:00:02] 2025-06-03 05:15:11,066 | INFO     | mean y: 2490455.269230769
[2025-06-03 08:00:02] 2025-06-03 05:15:11,066 | INFO     | -- intersect: -8573990600.073021
[2025-06-03 08:00:02] 2025-06-03 05:15:11,066 | INFO     | intersect: -8573990600.073021
[2025-06-03 08:00:02] 2025-06-03 05:15:11,066 | INFO     | chi2: 1.9444740129610594
[2025-06-03 08:00:02] 2025-06-03 05:15:11,067 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,068 | INFO     | sum of deviations: 13257483860.999987
[2025-06-03 08:00:02] 2025-06-03 05:15:11,069 | INFO     | mean x: 1748921100.0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,069 | INFO     | mean y: 2490124.463054187
[2025-06-03 08:00:02] 2025-06-03 05:15:11,069 | INFO     | -- intersect: -8936229715.588121
[2025-06-03 08:00:02] 2025-06-03 05:15:11,069 | INFO     | intersect: -8936229715.588121
[2025-06-03 08:00:02] 2025-06-03 05:15:11,069 | INFO     | chi2: 1.9454949501526466
[2025-06-03 08:00:02] 2025-06-03 05:15:11,069 | INFO     | current chi2=1.9454949501526466 (change=-0.052504542862599375 %)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,070 | INFO     | right removable region: 202
[2025-06-03 08:00:02] 2025-06-03 05:15:11,070 | INFO     | sum of square deviations: 2593916542.0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,072 | INFO     | sum of deviations: -25004181637.000004
[2025-06-03 08:00:02] 2025-06-03 05:15:11,072 | INFO     | mean x: 1748921405.0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,072 | INFO     | mean y: 2520237.4827586208
[2025-06-03 08:00:02] 2025-06-03 05:15:11,072 | INFO     | -- intersect: 16861331140.373114
[2025-06-03 08:00:02] 2025-06-03 05:15:11,072 | INFO     | intersect: 16861331140.373114
[2025-06-03 08:00:02] 2025-06-03 05:15:11,072 | INFO     | chi2: 0.15322584372457712
[2025-06-03 08:00:02] 2025-06-03 05:15:11,073 | INFO     | current chi2=0.15322584372457712 (change=92.1199335808431 %)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,073 | INFO     | sum of square deviations: 2406926989.5
[2025-06-03 08:00:02] 2025-06-03 05:15:11,075 | INFO     | sum of deviations: -23038041989.5
[2025-06-03 08:00:02] 2025-06-03 05:15:11,075 | INFO     | mean x: 1748921557.5
[2025-06-03 08:00:02] 2025-06-03 05:15:11,075 | INFO     | mean y: 2518590.5606060605
[2025-06-03 08:00:02] 2025-06-03 05:15:11,075 | INFO     | -- intersect: 16742423229.876936
[2025-06-03 08:00:02] 2025-06-03 05:15:11,075 | INFO     | intersect: 16742423229.876936
[2025-06-03 08:00:02] 2025-06-03 05:15:11,075 | INFO     | chi2: 0.13882034488722766
[2025-06-03 08:00:02] 2025-06-03 05:15:11,076 | INFO     | current chi2=0.13882034488722766 (change=9.401481164785288 %)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,076 | INFO     | left removable region: 20
[2025-06-03 08:00:02] 2025-06-03 05:15:11,076 | INFO     | sum of square deviations: 1869302025.5
[2025-06-03 08:00:02] 2025-06-03 05:15:11,081 | INFO     | sum of deviations: -9612507398.499998
[2025-06-03 08:00:02] 2025-06-03 05:15:11,081 | INFO     | mean x: 1748921679.5
[2025-06-03 08:00:02] 2025-06-03 05:15:11,081 | INFO     | mean y: 2506937.818681319
[2025-06-03 08:00:02] 2025-06-03 05:15:11,081 | INFO     | -- intersect: 8995982766.902029
[2025-06-03 08:00:02] 2025-06-03 05:15:11,081 | INFO     | intersect: 8995982766.902029
[2025-06-03 08:00:02] 2025-06-03 05:15:11,082 | INFO     | chi2: 0.0883309361481717
[2025-06-03 08:00:02] 2025-06-03 05:15:11,082 | INFO     | -- intersect: 8995982766.902029
[2025-06-03 08:00:02] 2025-06-03 05:15:11,082 | INFO     | current memory leak: -5.14 B/s (using 182 data points, chi2=0.09)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,083 | INFO     | ..............................
[2025-06-03 08:00:02] 2025-06-03 05:15:11,083 | INFO     | . Timing measurements:
[2025-06-03 08:00:02] 2025-06-03 05:15:11,083 | INFO     | . get job = 0 s
[2025-06-03 08:00:02] 2025-06-03 05:15:11,083 | INFO     | . initial setup = 3 s
[2025-06-03 08:00:02] 2025-06-03 05:15:11,083 | INFO     | . payload setup = 14 s
[2025-06-03 08:00:02] 2025-06-03 05:15:11,083 | INFO     | . stage-in = 0 s
[2025-06-03 08:00:02] 2025-06-03 05:15:11,083 | INFO     | . payload execution = 12701 s
[2025-06-03 08:00:02] 2025-06-03 05:15:11,083 | INFO     | . stage-out = 3 s
[2025-06-03 08:00:02] 2025-06-03 05:15:11,084 | INFO     | . log creation = 0 s
[2025-06-03 08:00:02] 2025-06-03 05:15:11,084 | INFO     | ..............................
[2025-06-03 08:00:02] 2025-06-03 05:15:11,282 | INFO     | 
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | job summary report
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | --------------------------------------------------
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | PanDA job id: 6677386737
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | task id: 45006595
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | errors: (none)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | pilot state: finished 
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | transexitcode: 0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | exeerrorcode: 0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,283 | INFO     | exeerrordiag: 
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | exitcode: 0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | exitmsg: OK
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | cpuconsumptiontime: 48406 s
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | nevents: 400
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | neventsw: 0
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | pid: 5357
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | pgrp: 5357
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | corecount: 8
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | event service: False
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | sizes: {0: 2404347, 1: 2405203, 2: 2405203, 9: 2405437, 12: 2405465, 12720: 2434879, 12723: 2443848, 12724: 2443904, 12811: 2444074}
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | --------------------------------------------------
[2025-06-03 08:00:02] 2025-06-03 05:15:11,284 | INFO     | 
[2025-06-03 08:00:02] 2025-06-03 05:15:11,285 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-06-03 08:00:02] 2025-06-03 05:15:11,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,772 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,772 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,772 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-03 08:00:02] 2025-06-03 05:15:11,772 | INFO     | job 6677386737 has completed (purged errors)
[2025-06-03 08:00:02] 2025-06-03 05:15:11,773 | INFO     | overall cleanup function is called
[2025-06-03 08:00:02] 2025-06-03 05:15:12,780 | INFO     | --- collectZombieJob: --- 10, [5357]
[2025-06-03 08:00:02] 2025-06-03 05:15:12,781 | INFO     | zombie collector waiting for pid 5357
[2025-06-03 08:00:02] 2025-06-03 05:15:12,781 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-03 08:00:02] 2025-06-03 05:15:12,781 | INFO     | collected zombie processes
[2025-06-03 08:00:02] 2025-06-03 05:15:12,781 | INFO     | will attempt to kill all subprocesses of pid=5357
[2025-06-03 08:00:02] 2025-06-03 05:15:12,915 | INFO     | process IDs to be killed: [5357] (in reverse order)
[2025-06-03 08:00:02] 2025-06-03 05:15:13,673 | WARNING  | found no corresponding commands to process id(s)
[2025-06-03 08:00:02] 2025-06-03 05:15:13,674 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-03 08:00:02] 2025-06-03 05:15:13,677 | INFO     | did not find any defunct processes belonging to 5357
[2025-06-03 08:00:02] 2025-06-03 05:15:13,680 | INFO     | did not find any defunct processes belonging to 5357
[2025-06-03 08:00:02] 2025-06-03 05:15:13,681 | INFO     | ready for new job
[2025-06-03 08:00:02] 2025-06-03 05:15:13,681 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-03 08:00:02] 2025-06-03 05:15:13,683 | INFO     | **************************************
[2025-06-03 08:00:02] 2025-06-03 05:15:13,683 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-03 08:00:02] 2025-06-03 05:15:13,683 | INFO     | **************************************
[2025-06-03 08:00:02] 2025-06-03 05:15:13,683 | INFO     | 
[2025-06-03 08:00:02] 2025-06-03 05:15:13,684 | INFO     | pilot is running in a VM
[2025-06-03 08:00:02] 2025-06-03 05:15:13,684 | INFO     | architecture information:
[2025-06-03 08:00:02] 2025-06-03 05:15:13,691 | INFO     | executing command: cat /etc/os-release
[2025-06-03 08:00:02] 2025-06-03 05:15:14,005 | INFO     | cat /etc/os-release:
[2025-06-03 08:00:02] NAME="CentOS Linux"
[2025-06-03 08:00:02] VERSION="7 (Core)"
[2025-06-03 08:00:02] ID="centos"
[2025-06-03 08:00:02] ID_LIKE="rhel fedora"
[2025-06-03 08:00:02] VERSION_ID="7"
[2025-06-03 08:00:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-03 08:00:02] ANSI_COLOR="0;31"
[2025-06-03 08:00:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-03 08:00:02] HOME_URL="https://www.centos.org/"
[2025-06-03 08:00:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-03 08:00:02] 
[2025-06-03 08:00:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-03 08:00:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-03 08:00:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-03 08:00:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-03 08:00:02] 
[2025-06-03 08:00:02] 2025-06-03 05:15:14,006 | INFO     | **************************************
[2025-06-03 08:00:02] 2025-06-03 05:15:14,510 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-06-03 08:00:02] 2025-06-03 05:15:14,709 | INFO     | sufficient remaining disk space (497100521472 B)
[2025-06-03 08:00:02] 2025-06-03 05:15:14,710 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-03 08:00:02] 2025-06-03 05:15:14,710 | INFO     | current server update state: UPDATING_FINAL
[2025-06-03 08:00:02] 2025-06-03 05:15:14,710 | INFO     | update_server=False
[2025-06-03 08:00:02] 2025-06-03 05:15:14,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-03 08:00:02] 2025-06-03 05:15:14,710 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-06-03 08:00:02] 2025-06-03 05:15:14,711 | INFO     | found 0 job(s) in 20 queues
[2025-06-03 08:00:02] 2025-06-03 05:15:14,711 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-03 08:00:02] 2025-06-03 05:15:14,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-03 08:00:02] 2025-06-03 05:15:14,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-03 08:00:02] 2025-06-03 05:15:14,724 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:00:02] 2025-06-03 05:15:14,725 | INFO     | aborting loop
[2025-06-03 08:00:02] 2025-06-03 05:15:14,875 | INFO     | all job control threads have been joined
[2025-06-03 08:00:02] 2025-06-03 05:15:15,603 | INFO     | all data control threads have been joined
[2025-06-03 08:00:02] 2025-06-03 05:15:15,716 | INFO     | [job] retrieve thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:15,731 | INFO     | [job] job monitor thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:15,764 | INFO     | [payload] execute_payloads thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:15,838 | INFO     | all payload control threads have been joined
[2025-06-03 08:00:02] 2025-06-03 05:15:15,881 | INFO     | [job] control thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-03 08:00:02] 2025-06-03 05:15:16,028 | INFO     | [payload] validate_post thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,086 | INFO     | [payload] failed_post thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,209 | INFO     | [payload] validate_pre thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,296 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-03 08:00:02] 2025-06-03 05:15:16,609 | INFO     | [data] control thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,645 | INFO     | [data] copytool_in thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,699 | INFO     | [job] validate thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,717 | INFO     | [data] copytool_out thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,759 | INFO     | [job] create_data_payload thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:16,844 | INFO     | [payload] control thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:17,302 | INFO     | [job] queue monitor thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:20,028 | INFO     | [data] queue_monitor thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:25,062 | INFO     | job.realtimelogging is not enabled
[2025-06-03 08:00:02] 2025-06-03 05:15:26,068 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-03 08:00:02] 2025-06-03 05:15:26,362 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139862315411264)>', '<ExcThread(monitor, started 139862011258624)>']
[2025-06-03 08:00:02] 2025-06-03 05:15:26,783 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-03 08:00:02] 2025-06-03 05:15:26,784 | INFO     | [monitor] control thread has ended
[2025-06-03 08:00:02] 2025-06-03 05:15:31,388 | INFO     | all workflow threads have been joined
[2025-06-03 08:00:02] 2025-06-03 05:15:31,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-03 08:00:02] 2025-06-03 05:15:31,389 | INFO     | traces error code: 0
[2025-06-03 08:00:02] 2025-06-03 05:15:31,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-03 08:00:02] 2025-06-03 05:15:31,653 [wrapper] ==== pilot stdout END ====
[2025-06-03 08:00:02] 2025-06-03 05:15:31,699 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-03 08:00:02] 2025-06-03 05:15:31,794 [wrapper] pilotpid: 30872
[2025-06-03 08:00:02] 2025-06-03 05:15:31,933 [wrapper] Pilot exit status: 0
[2025-06-03 08:00:02] 2025-06-03 05:15:32,384 [wrapper] pandaids: 6677386737
[2025-06-03 08:00:02] 2025-06-03 05:15:33,456 [wrapper] cleanup supervisor_pilot 16924 30873
[2025-06-03 08:00:02] 2025-06-03 05:15:33,546 [wrapper] Test setup, not cleaning
[2025-06-03 08:00:02] 2025-06-03 05:15:33,622 [wrapper] apfmon messages muted
[2025-06-03 08:00:02] 2025-06-03 05:15:33,735 [wrapper] ==== wrapper stdout END ====
[2025-06-03 08:00:02] 2025-06-03 05:15:33,839 [wrapper] ==== wrapper stderr END ====
[2025-06-03 08:00:02]  *** Error codes and diagnostics ***
[2025-06-03 08:00:02]     "exeErrorCode": 0,
[2025-06-03 08:00:02]     "exeErrorDiag": "",
[2025-06-03 08:00:02]     "pilotErrorCode": 0,
[2025-06-03 08:00:02]     "pilotErrorDiag": "",
[2025-06-03 08:00:02]  *** Listing of results directory ***
[2025-06-03 08:00:02] total 390856
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc    495897 Jun  2 19:07 pilot3.tar.gz
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc      5111 Jun  2 19:16 queuedata.json
[2025-06-03 08:00:02] -rwx------. 1 boinc boinc     37140 Jun  2 19:17 runpilot2-wrapper.sh
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc       100 Jun  3 03:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-03 08:00:02] -rwxr-xr-x. 1 boinc boinc      7986 Jun  3 03:40 run_atlas
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc       105 Jun  3 03:40 job.xml
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc      6391 Jun  3 03:40 init_data.xml
[2025-06-03 08:00:02] -rw-r--r--. 2 boinc boinc 214504274 Jun  3 03:40 EVNT.45006593._000208.pool.root.1
[2025-06-03 08:00:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:40 start_atlas.sh
[2025-06-03 08:00:02] drwxrwx--x. 2 boinc boinc        68 Jun  3 03:40 shared
[2025-06-03 08:00:02] -rw-r--r--. 2 boinc boinc    508874 Jun  3 03:40 input.tar.gz
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc         0 Jun  3 03:40 boinc_lockfile
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc      2520 Jun  3 03:40 pandaJob.out
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc    988081 Jun  3 03:41 agis_schedconf.cvmfs.json
[2025-06-03 08:00:02] drwx------. 4 boinc boinc      4096 Jun  3 03:41 pilot3
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc 178950924 Jun  3 07:12 HITS.45006595._005179.pool.root.1
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc       531 Jun  3 07:13 boinc_task_state.xml
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc      1019 Jun  3 07:13 memory_monitor_summary.json
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc   1603667 Jun  3 07:13 agis_ddmendpoints.agis.ALL.json
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc    361228 Jun  3 07:13 log.45006595._005179.job.log.tgz.1
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc        95 Jun  3 07:14 pilot_heartbeat.json
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc      7684 Jun  3 07:15 heartbeat.json
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc      4611 Jun  3 07:15 pilotlog.txt
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc   1115939 Jun  3 07:15 log.45006595._005179.job.log.1
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc       357 Jun  3 07:15 output.list
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc       620 Jun  3 07:15 runtime_log
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc   1495040 Jun  3 07:15 result.tar.gz
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc      8659 Jun  3 07:15 runtime_log.err
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc       656 Jun  3 07:15 BXgMDm0xNg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmgfKDmmIQKAn.diag
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc      8192 Jun  3 08:00 boinc_mmap_file
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc        28 Jun  3 08:00 wrapper_checkpoint.txt
[2025-06-03 08:00:02] -rw-r--r--. 1 boinc boinc     20703 Jun  3 08:00 stderr.txt
[2025-06-03 08:00:02] HITS file was successfully produced:
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc 178950924 Jun  3 07:12 shared/HITS.pool.root.1
[2025-06-03 08:00:02]  *** Contents of shared directory: ***
[2025-06-03 08:00:02] total 386216
[2025-06-03 08:00:02] -rw-r--r--. 2 boinc boinc 214504274 Jun  3 03:40 ATLAS.root_0
[2025-06-03 08:00:02] -rw-r--r--. 2 boinc boinc     15093 Jun  3 03:40 start_atlas.sh
[2025-06-03 08:00:02] -rw-r--r--. 2 boinc boinc    508874 Jun  3 03:40 input.tar.gz
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc 178950924 Jun  3 07:12 HITS.pool.root.1
[2025-06-03 08:00:02] -rw-------. 1 boinc boinc   1495040 Jun  3 07:15 result.tar.gz
08:00:04 (21403): run_atlas exited; CPU time 48568.783879
08:00:04 (21403): called boinc_finish(0)

</stderr_txt>
]]>

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