Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:36:26 (3272130): wrapper (7.7.26015): starting
14:36:26 (3272130): wrapper: running run_atlas (--nthreads 4)
[2025-06-04 14:36:26] Arguments: --nthreads 4
[2025-06-04 14:36:26] Threads: 4
[2025-06-04 14:36:26] Checking for CVMFS
[2025-06-04 14:36:26] No cvmfs_config command found, will try listing directly
[2025-06-04 14:36:26] CVMFS is ok
[2025-06-04 14:36:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-06-04 14:36:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-06-04 14:36:26] Further information can be found at the LHC@home message board.
[2025-06-04 14:36:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-06-04 14:36:26] Checking for apptainer binary...
[2025-06-04 14:36:26] which: no apptainer in ((null))
[2025-06-04 14:36:26] apptainer is not installed, using version from CVMFS
[2025-06-04 14:36:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-06-04 14:36:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-06-04 14:36:26] apptainer works
[2025-06-04 14:36:26] Set ATHENA_PROC_NUMBER=4
[2025-06-04 14:36:26] Set ATHENA_CORE_NUMBER=4
[2025-06-04 14:36:26] Starting ATLAS job with PandaID=6677381683
[2025-06-04 14:36:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-06-04 16:57:37]  *** The last 200 lines of the pilot log: ***
[2025-06-04 16:57:37] 2025-06-04 14:54:38,122 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-06-04 16:57:37] 2025-06-04 14:54:38,824 | INFO     | monitor loop #574: job 0:6677381683 is in state 'finished'
[2025-06-04 16:57:37] 2025-06-04 14:54:38,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:57:37] 2025-06-04 14:54:41,327 | INFO     | monitor loop #575: job 0:6677381683 is in state 'finished'
[2025-06-04 16:57:37] 2025-06-04 14:54:41,327 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:57:37] 2025-06-04 14:54:43,831 | INFO     | monitor loop #576: job 0:6677381683 is in state 'finished'
[2025-06-04 16:57:37] 2025-06-04 14:54:43,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-06-04 16:57:37] 2025-06-04 14:54:44,744 | INFO     | CPU arch script returned: x86-64-v3
[2025-06-04 16:57:37] 2025-06-04 14:54:44,744 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6677381683/memory_monitor_summary.json (trf name=prmon)
[2025-06-04 16:57:37] 2025-06-04 14:54:44,745 | INFO     | extracted standard info from prmon json
[2025-06-04 16:57:37] 2025-06-04 14:54:44,745 | INFO     | extracted standard memory fields from prmon json
[2025-06-04 16:57:37] 2025-06-04 14:54:44,745 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-06-04 16:57:37] 2025-06-04 14:54:44,746 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-06-04 16:57:37] 2025-06-04 14:54:44,746 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-06-04 16:57:37] 2025-06-04 14:54:44,749 | INFO     | fitting pss+swap vs Time
[2025-06-04 16:57:37] 2025-06-04 14:54:44,749 | INFO     | sum of square deviations: 762879420.0
[2025-06-04 16:57:37] 2025-06-04 14:54:44,750 | INFO     | sum of deviations: 5861999350.0
[2025-06-04 16:57:37] 2025-06-04 14:54:44,750 | INFO     | mean x: 1749044725.0
[2025-06-04 16:57:37] 2025-06-04 14:54:44,750 | INFO     | mean y: 2326804.414814815
[2025-06-04 16:57:37] 2025-06-04 14:54:44,750 | INFO     | -- intersect: -13437410554.171854
[2025-06-04 16:57:37] 2025-06-04 14:54:44,750 | INFO     | intersect: -13437410554.171854
[2025-06-04 16:57:37] 2025-06-04 14:54:44,751 | INFO     | chi2: 1.56814974622806
[2025-06-04 16:57:37] 2025-06-04 14:54:44,751 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 16:57:37] 2025-06-04 14:54:44,751 | INFO     | sum of deviations: 5813733709.999995
[2025-06-04 16:57:37] 2025-06-04 14:54:44,752 | INFO     | mean x: 1749044572.5
[2025-06-04 16:57:37] 2025-06-04 14:54:44,752 | INFO     | mean y: 2326713.8615384614
[2025-06-04 16:57:37] 2025-06-04 14:54:44,752 | INFO     | -- intersect: -14924697267.38036
[2025-06-04 16:57:37] 2025-06-04 14:54:44,752 | INFO     | intersect: -14924697267.38036
[2025-06-04 16:57:37] 2025-06-04 14:54:44,752 | INFO     | chi2: 1.5701367663397743
[2025-06-04 16:57:37] 2025-06-04 14:54:44,752 | INFO     | current chi2=1.5701367663397743 (change=-0.12671112031830647 %)
[2025-06-04 16:57:37] 2025-06-04 14:54:44,752 | INFO     | right removable region: 129
[2025-06-04 16:57:37] 2025-06-04 14:54:44,753 | INFO     | sum of square deviations: 681212772.5
[2025-06-04 16:57:37] 2025-06-04 14:54:44,753 | INFO     | sum of deviations: -13361333707.50001
[2025-06-04 16:57:37] 2025-06-04 14:54:44,753 | INFO     | mean x: 1749044877.5
[2025-06-04 16:57:37] 2025-06-04 14:54:44,754 | INFO     | mean y: 2362062.207692308
[2025-06-04 16:57:37] 2025-06-04 14:54:44,754 | INFO     | -- intersect: 34308196041.07804
[2025-06-04 16:57:37] 2025-06-04 14:54:44,754 | INFO     | intersect: 34308196041.07804
[2025-06-04 16:57:37] 2025-06-04 14:54:44,754 | INFO     | chi2: 0.03224132276392364
[2025-06-04 16:57:37] 2025-06-04 14:54:44,754 | INFO     | current chi2=0.03224132276392364 (change=97.94398954299645 %)
[2025-06-04 16:57:37] 2025-06-04 14:54:44,754 | INFO     | sum of square deviations: 605592750.0
[2025-06-04 16:57:37] 2025-06-04 14:54:44,755 | INFO     | sum of deviations: -11742228245.000002
[2025-06-04 16:57:37] 2025-06-04 14:54:44,755 | INFO     | mean x: 1749045030.0
[2025-06-04 16:57:37] 2025-06-04 14:54:44,755 | INFO     | mean y: 2358762.512
[2025-06-04 16:57:37] 2025-06-04 14:54:44,755 | INFO     | -- intersect: 33915720428.487816
[2025-06-04 16:57:37] 2025-06-04 14:54:44,755 | INFO     | intersect: 33915720428.487816
[2025-06-04 16:57:37] 2025-06-04 14:54:44,756 | INFO     | chi2: 0.02962519641847402
[2025-06-04 16:57:37] 2025-06-04 14:54:44,756 | INFO     | current chi2=0.02962519641847402 (change=8.114202896094984 %)
[2025-06-04 16:57:37] 2025-06-04 14:54:44,756 | INFO     | left removable region: 20
[2025-06-04 16:57:37] 2025-06-04 14:54:44,756 | INFO     | sum of square deviations: 401533110.0
[2025-06-04 16:57:37] 2025-06-04 14:54:44,757 | INFO     | sum of deviations: -7215148808.000001
[2025-06-04 16:57:37] 2025-06-04 14:54:44,757 | INFO     | mean x: 1749045152.0
[2025-06-04 16:57:37] 2025-06-04 14:54:44,757 | INFO     | mean y: 2350645.2935779816
[2025-06-04 16:57:37] 2025-06-04 14:54:44,757 | INFO     | -- intersect: 31430944525.36235
[2025-06-04 16:57:37] 2025-06-04 14:54:44,757 | INFO     | intersect: 31430944525.36235
[2025-06-04 16:57:37] 2025-06-04 14:54:44,757 | INFO     | chi2: 0.023303087162092145
[2025-06-04 16:57:37] 2025-06-04 14:54:44,757 | INFO     | -- intersect: 31430944525.36235
[2025-06-04 16:57:37] 2025-06-04 14:54:44,758 | INFO     | current memory leak: -17.97 B/s (using 109 data points, chi2=0.02)
[2025-06-04 16:57:37] 2025-06-04 14:54:44,758 | INFO     | ..............................
[2025-06-04 16:57:37] 2025-06-04 14:54:44,758 | INFO     | . Timing measurements:
[2025-06-04 16:57:37] 2025-06-04 14:54:44,758 | INFO     | . get job = 0 s
[2025-06-04 16:57:37] 2025-06-04 14:54:44,758 | INFO     | . initial setup = 1 s
[2025-06-04 16:57:37] 2025-06-04 14:54:44,758 | INFO     | . payload setup = 10 s
[2025-06-04 16:57:37] 2025-06-04 14:54:44,758 | INFO     | . stage-in = 0 s
[2025-06-04 16:57:37] 2025-06-04 14:54:44,759 | INFO     | . payload execution = 8240 s
[2025-06-04 16:57:37] 2025-06-04 14:54:44,759 | INFO     | . stage-out = 0 s
[2025-06-04 16:57:37] 2025-06-04 14:54:44,759 | INFO     | . log creation = 0 s
[2025-06-04 16:57:37] 2025-06-04 14:54:44,759 | INFO     | ..............................
[2025-06-04 16:57:37] 2025-06-04 14:54:45,233 | INFO     | 
[2025-06-04 16:57:37] 2025-06-04 14:54:45,233 | INFO     | job summary report
[2025-06-04 16:57:37] 2025-06-04 14:54:45,233 | INFO     | --------------------------------------------------
[2025-06-04 16:57:37] 2025-06-04 14:54:45,233 | INFO     | PanDA job id: 6677381683
[2025-06-04 16:57:37] 2025-06-04 14:54:45,233 | INFO     | task id: 45006595
[2025-06-04 16:57:37] 2025-06-04 14:54:45,233 | INFO     | errors: (none)
[2025-06-04 16:57:37] 2025-06-04 14:54:45,233 | INFO     | status: LOG_TRANSFER = DONE 
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | pilot state: finished 
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | transexitcode: 0
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | exeerrorcode: 0
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | exeerrordiag: 
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | exitcode: 0
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | exitmsg: OK
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | cpuconsumptiontime: 31104 s
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | nevents: 400
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | neventsw: 0
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | pid: 3283407
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | pgrp: 3283407
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | corecount: 4
[2025-06-04 16:57:37] 2025-06-04 14:54:45,234 | INFO     | event service: False
[2025-06-04 16:57:37] 2025-06-04 14:54:45,235 | INFO     | sizes: {0: 2397347, 1: 2397347, 8: 2397581, 11: 2397609, 8255: 2425677, 8256: 2434642, 8259: 2434826, 8266: 2434996}
[2025-06-04 16:57:37] 2025-06-04 14:54:45,235 | INFO     | --------------------------------------------------
[2025-06-04 16:57:37] 2025-06-04 14:54:45,235 | INFO     | 
[2025-06-04 16:57:37] 2025-06-04 14:54:45,235 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-06-04 16:57:37] 2025-06-04 14:54:45,267 | INFO     | queue jobs had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue payloads had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue data_in had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue data_out had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,268 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue completed_jobids has 1 job(s)
[2025-06-04 16:57:37] 2025-06-04 14:54:45,269 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,270 | INFO     | queue messages had 0 job(s) [purged]
[2025-06-04 16:57:37] 2025-06-04 14:54:45,270 | INFO     | job 6677381683 has completed (purged errors)
[2025-06-04 16:57:37] 2025-06-04 14:54:45,270 | INFO     | overall cleanup function is called
[2025-06-04 16:57:37] 2025-06-04 14:54:46,279 | INFO     | --- collectZombieJob: --- 10, [3283407]
[2025-06-04 16:57:37] 2025-06-04 14:54:46,279 | INFO     | zombie collector waiting for pid 3283407
[2025-06-04 16:57:37] 2025-06-04 14:54:46,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-06-04 16:57:37] 2025-06-04 14:54:46,279 | INFO     | collected zombie processes
[2025-06-04 16:57:37] 2025-06-04 14:54:46,279 | INFO     | will attempt to kill all subprocesses of pid=3283407
[2025-06-04 16:57:37] 2025-06-04 14:54:46,949 | INFO     | process IDs to be killed: [3283407] (in reverse order)
[2025-06-04 16:57:37] 2025-06-04 14:54:47,180 | WARNING  | found no corresponding commands to process id(s)
[2025-06-04 16:57:37] 2025-06-04 14:54:47,180 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-06-04 16:57:37] 2025-06-04 14:54:47,219 | INFO     | did not find any defunct processes belonging to 3283407
[2025-06-04 16:57:37] 2025-06-04 14:54:47,241 | INFO     | did not find any defunct processes belonging to 3283407
[2025-06-04 16:57:37] 2025-06-04 14:54:47,242 | INFO     | ready for new job
[2025-06-04 16:57:37] 2025-06-04 14:54:47,242 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-06-04 16:57:37] 2025-06-04 14:54:47,244 | INFO     | **************************************
[2025-06-04 16:57:37] 2025-06-04 14:54:47,244 | INFO     | ***  PanDA Pilot version 3.10.2.2  ***
[2025-06-04 16:57:37] 2025-06-04 14:54:47,244 | INFO     | **************************************
[2025-06-04 16:57:37] 2025-06-04 14:54:47,244 | INFO     | 
[2025-06-04 16:57:37] 2025-06-04 14:54:47,252 | INFO     | architecture information:
[2025-06-04 16:57:37] 2025-06-04 14:54:47,252 | INFO     | executing command: cat /etc/os-release
[2025-06-04 16:57:37] 2025-06-04 14:54:47,274 | INFO     | cat /etc/os-release:
[2025-06-04 16:57:37] NAME="CentOS Linux"
[2025-06-04 16:57:37] VERSION="7 (Core)"
[2025-06-04 16:57:37] ID="centos"
[2025-06-04 16:57:37] ID_LIKE="rhel fedora"
[2025-06-04 16:57:37] VERSION_ID="7"
[2025-06-04 16:57:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-06-04 16:57:37] ANSI_COLOR="0;31"
[2025-06-04 16:57:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-06-04 16:57:37] HOME_URL="https://www.centos.org/"
[2025-06-04 16:57:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-06-04 16:57:37] 
[2025-06-04 16:57:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-06-04 16:57:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-06-04 16:57:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-06-04 16:57:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-06-04 16:57:37] 
[2025-06-04 16:57:37] 2025-06-04 14:54:47,274 | INFO     | **************************************
[2025-06-04 16:57:37] 2025-06-04 14:54:47,777 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-06-04 16:57:37] 2025-06-04 14:54:47,800 | INFO     | sufficient remaining disk space (3239219036160 B)
[2025-06-04 16:57:37] 2025-06-04 14:54:47,800 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-06-04 16:57:37] 2025-06-04 14:54:47,800 | INFO     | current server update state: UPDATING_FINAL
[2025-06-04 16:57:37] 2025-06-04 14:54:47,800 | INFO     | update_server=False
[2025-06-04 16:57:37] 2025-06-04 14:54:47,800 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-06-04 16:57:37] 2025-06-04 14:54:47,801 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:57:37] 2025-06-04 14:54:47,801 | INFO     | aborting loop
[2025-06-04 16:57:37] 2025-06-04 14:54:47,985 | INFO     | all job control threads have been joined
[2025-06-04 16:57:37] 2025-06-04 14:54:48,043 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-06-04 16:57:37] 2025-06-04 14:54:48,164 | INFO     | all data control threads have been joined
[2025-06-04 16:57:37] 2025-06-04 14:54:48,507 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-06-04 16:57:37] 2025-06-04 14:54:48,632 | INFO     | found 0 job(s) in 20 queues
[2025-06-04 16:57:37] 2025-06-04 14:54:48,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-06-04 16:57:37] 2025-06-04 14:54:48,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-06-04 16:57:37] 2025-06-04 14:54:48,672 | INFO     | all payload control threads have been joined
[2025-06-04 16:57:37] 2025-06-04 14:54:48,806 | INFO     | [job] job monitor thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:48,807 | INFO     | [job] retrieve thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:48,990 | INFO     | [job] control thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:49,169 | INFO     | [data] control thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:49,450 | INFO     | [payload] execute_payloads thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:49,471 | INFO     | [job] create_data_payload thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:49,512 | INFO     | [job] validate thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:49,513 | INFO     | [payload] validate_post thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:49,677 | INFO     | [payload] control thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:49,701 | INFO     | [data] copytool_in thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:49,865 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-06-04 16:57:37] 2025-06-04 14:54:50,048 | INFO     | [data] copytool_out thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:50,081 | INFO     | [payload] validate_pre thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:50,336 | INFO     | [payload] failed_post thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:50,870 | INFO     | [job] queue monitor thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:52,513 | INFO     | [data] queue_monitor thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:54:57,902 | INFO     | job.realtimelogging is not enabled
[2025-06-04 16:57:37] 2025-06-04 14:54:58,907 | INFO     | [payload] run_realtimelog thread has finished
[2025-06-04 16:57:37] 2025-06-04 14:55:00,952 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23143491008320)>', '<ExcThread(monitor, started 23143250884352)>']
[2025-06-04 16:57:37] 2025-06-04 14:55:01,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-06-04 16:57:37] 2025-06-04 14:55:01,698 | INFO     | [monitor] control thread has ended
[2025-06-04 16:57:37] 2025-06-04 14:55:05,977 | INFO     | all workflow threads have been joined
[2025-06-04 16:57:37] 2025-06-04 14:55:05,977 | INFO     | end of generic workflow (traces error code: 0)
[2025-06-04 16:57:37] 2025-06-04 14:55:05,977 | INFO     | traces error code: 0
[2025-06-04 16:57:37] 2025-06-04 14:55:05,978 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-06-04 16:57:37] 2025-06-04 14:55:06,121 [wrapper] ==== pilot stdout END ====
[2025-06-04 16:57:37] 2025-06-04 14:55:06,125 [wrapper] ==== wrapper stdout RESUME ====
[2025-06-04 16:57:37] 2025-06-04 14:55:06,129 [wrapper] pilotpid: 3276036
[2025-06-04 16:57:37] 2025-06-04 14:55:06,133 [wrapper] Pilot exit status: 0
[2025-06-04 16:57:37] 2025-06-04 14:55:06,149 [wrapper] pandaids: 6677381683
[2025-06-04 16:57:37] 2025-06-04 14:55:06,301 [wrapper] cleanup supervisor_pilot 3738031 3276037
[2025-06-04 16:57:37] 2025-06-04 14:55:06,305 [wrapper] Test setup, not cleaning
[2025-06-04 16:57:37] 2025-06-04 14:55:06,309 [wrapper] apfmon messages muted
[2025-06-04 16:57:37] 2025-06-04 14:55:06,313 [wrapper] ==== wrapper stdout END ====
[2025-06-04 16:57:37] 2025-06-04 14:55:06,316 [wrapper] ==== wrapper stderr END ====
[2025-06-04 16:57:37]  *** Error codes and diagnostics ***
[2025-06-04 16:57:37]     "exeErrorCode": 0,
[2025-06-04 16:57:37]     "exeErrorDiag": "",
[2025-06-04 16:57:37]     "pilotErrorCode": 0,
[2025-06-04 16:57:37]     "pilotErrorDiag": "",
[2025-06-04 16:57:37]  *** Listing of results directory ***
[2025-06-04 16:57:37] total 398472
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc    495897 Jun  2 17:48 pilot3.tar.gz
[2025-06-04 16:57:37] -rwx------ 1 boinc boinc     37140 Jun  2 17:56 runpilot2-wrapper.sh
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc      5111 Jun  2 17:57 queuedata.json
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc       100 Jun  4 14:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-06-04 16:57:37] -rwxr-xr-x 1 boinc boinc      7986 Jun  4 14:36 run_atlas
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc       105 Jun  4 14:36 job.xml
[2025-06-04 16:57:37] -rw-r--r-- 2 boinc boinc 216549361 Jun  4 14:36 EVNT.45006593._000103.pool.root.1
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc      6686 Jun  4 14:36 init_data.xml
[2025-06-04 16:57:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:36 start_atlas.sh
[2025-06-04 16:57:37] drwxrwx--x 2 boinc boinc      4096 Jun  4 14:36 shared
[2025-06-04 16:57:37] -rw-r--r-- 2 boinc boinc    508879 Jun  4 14:36 input.tar.gz
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc         0 Jun  4 14:36 boinc_lockfile
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc      2521 Jun  4 14:36 pandaJob.out
[2025-06-04 16:57:37] -rw------- 1 boinc boinc    986811 Jun  4 14:36 agis_schedconf.cvmfs.json
[2025-06-04 16:57:37] -rw------- 1 boinc boinc   1598969 Jun  4 14:36 agis_ddmendpoints.agis.ALL.json
[2025-06-04 16:57:37] drwx------ 4 boinc boinc      4096 Jun  4 14:36 pilot3
[2025-06-04 16:57:37] -rw------- 1 boinc boinc 185554198 Jun  4 16:54 HITS.45006595._002557.pool.root.1
[2025-06-04 16:57:37] -rw------- 1 boinc boinc        95 Jun  4 16:54 pilot_heartbeat.json
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc       528 Jun  4 16:54 boinc_task_state.xml
[2025-06-04 16:57:37] -rw------- 1 boinc boinc      1030 Jun  4 16:54 memory_monitor_summary.json
[2025-06-04 16:57:37] -rw------- 1 boinc boinc    269299 Jun  4 16:54 log.45006595._002557.job.log.tgz.1
[2025-06-04 16:57:37] -rw------- 1 boinc boinc      7699 Jun  4 16:54 heartbeat.json
[2025-06-04 16:57:37] -rw------- 1 boinc boinc      4437 Jun  4 16:55 pilotlog.txt
[2025-06-04 16:57:37] -rw------- 1 boinc boinc    781681 Jun  4 16:55 log.45006595._002557.job.log.1
[2025-06-04 16:57:37] -rw------- 1 boinc boinc       357 Jun  4 16:55 output.list
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc       620 Jun  4 16:55 runtime_log
[2025-06-04 16:57:37] -rw------- 1 boinc boinc   1064960 Jun  4 16:55 result.tar.gz
[2025-06-04 16:57:37] -rw------- 1 boinc boinc       663 Jun  4 16:55 tGNNDmohMg7nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpDfKDmeNkxPn.diag
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc      9040 Jun  4 16:55 runtime_log.err
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc        26 Jun  4 16:57 wrapper_checkpoint.txt
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc      8192 Jun  4 16:57 boinc_mmap_file
[2025-06-04 16:57:37] -rw-r--r-- 1 boinc boinc     20949 Jun  4 16:57 stderr.txt
[2025-06-04 16:57:37] HITS file was successfully produced:
[2025-06-04 16:57:37] -rw------- 1 boinc boinc 185554198 Jun  4 16:54 shared/HITS.pool.root.1
[2025-06-04 16:57:37]  *** Contents of shared directory: ***
[2025-06-04 16:57:37] total 394248
[2025-06-04 16:57:37] -rw-r--r-- 2 boinc boinc 216549361 Jun  4 14:36 ATLAS.root_0
[2025-06-04 16:57:37] -rw-r--r-- 2 boinc boinc     15093 Jun  4 14:36 start_atlas.sh
[2025-06-04 16:57:37] -rw-r--r-- 2 boinc boinc    508879 Jun  4 14:36 input.tar.gz
[2025-06-04 16:57:37] -rw------- 1 boinc boinc 185554198 Jun  4 16:54 HITS.pool.root.1
[2025-06-04 16:57:37] -rw------- 1 boinc boinc   1064960 Jun  4 16:55 result.tar.gz
16:57:38 (3272130): run_atlas exited; CPU time 31527.910054
16:57:38 (3272130): called boinc_finish(0)

</stderr_txt>
]]>

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